CmaCh06G009670 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCAAAACGACACAGTTTCAGCCCGCTCTGTGAAATAACAAACCAAAGAAAGAGAAAGCCCTAGGCCCTTTCATCTTCTTCTTCCTCTTCACGCCTGCTACTCCTCCCATCCAGCAGCGTAGTGTCGCCGTGTCCGTCTTAGCGGCCTGCAGTGGTTCATTGTTGCTTCTGGTATTCTCTCAATCTCCATCTATATCGTTTGTTCTGATTTGAAAAACTAAAATTAGGACTTGCCTAACCAAAGAAATAATAATACTAGAAGGTACAGTTAGAATTGTTCAAGTTCCAGAATTCTCTCTCTAGGCCTTCATATCCTCAAATACAACGTCCATCCAATTCAAATCAATATGAATTGAACAGAAACAGAACAATCCTTGTTTCCCAATCTTAGTTAGAGAATATTAGCGGGAAGAAGTATTCTGCTTGATGCTGTGCAAGTGCAACGCCGAGCAAAATCTACGGATATCATTGAAGAGACGAAATGCTTTTCCTTGAATATTACATTTTTTTCTTTCGTTCTTTCCAAGTTTGATTGGTTTTAGGAATTGGGTGAGAGAGCGACGAAGAAGAGTATTGCTAATGGCACAAGTTGTCAGTAGTGAAGCTGGTGATTCTTGTTTGTCTGTGTGAACTTGACAATCTTTCTCTCTCAGTCACAACTTACATTATTTGGAGTGGTAAATTTGCTCGGACAGTTGGGAATTCTTTTTTTGAGGTGTTTAGCTTGTAGCTTGCTAGACACAGAGGGCTCCAAGAGATGATCGATTCGTCATCTGCCCTCTCAAAAGATTGGGAAGTTCTTGTAGCAGGCAAGGGGTTTGCGCTGTTTCGTGGGGTTTGTGGGGTGAGAGGAGGTCTCCTAGTTATATATAGTCCCTTGCTAGATTCTATGATTCTCTTTGGGCGTTGATGACATGGTTGTTTGTATATTATTCTTGAGGCCTCATTGCATTTGATTGGAACCCCTTTCTTTACTGGGGTTCCTTTTGAATGCTCGTGTATTCTTTCATTTTTTCCTCAATGAAGCTCTCTTTTTCACAAGAAAATACTTGCACTTTTCATATTCATTTTGGGAGTCATTCTCTCTGCATGCTACCTATTTGGATGTTATTGACGACCTCACTTGTGAATTCTAGGTGGGAATAAAATGAACGAGACAATGATACAATTTCAACAGAGCTTAATTGAGCTAGAAACGGAAGCAGAGCGTCTCCTTATAGCCCGCAATGAGGTAAGTGTAAAAACATTGTAAAATTAGCAACTTAGCTTACGAGATGACTTGTATTTCCTCCTCTTTGTGACGTTCACTGAAATTGAAGTGTCACAACTTGTCTATCGTTGAAATGAAATTGTTCTATAACTTTGAGAAGCAAAAAGGTGAAGTGACTACTGTTGTTTGGGATTATAATGTCAGTTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCGTTGACTGCTTTGAGGAGGCGAGCACGGACAACAAAATCCAGTGTCCCATCACCTTTTGAGTCAATTATGAAGGATATGGGAGGTTCTGAAACAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGCACCTGGATGATGTTCCCAGGAACCGATGTGTTCGCCAGGGTTCCATTTCATGCTGCTCATTCAATCTTGGAGACAGGTTATTACTGGGACATTTTATTTCACGCTGTTAATGTTATGTATTTATTGGTGCATGGCTCTCTTTAGGAAATAATCCATTAGACTAAATTAAAATGTTTGCAATTCCATGTTCATTCTGCTCCCTGTAATGGCTATAATTAAATCCTCAAAGTTTCACGTTGAATAATCCAAAAGGTTTCTCTTAAGTTGGATGGGACAGCAGGGGGACCGGGGTGGTGTGTTGTTCGTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAACTCTCATGGTTTTGCTTTGGGCTTCCCCAAAAAGTCTCATACCAATGGAGAGAGTATTTCTTGATTATAAACCCATGATCATTTCCTAAATTAGCCGATGTGTAATTTTCATCATCCTACCGGTTGTAGTCAGTCTATAATTTGCCACTGGGAACATTCACTCACTTGTACTTTGTAGAGCTTTCACTTTATTTTGACAGACACATTATTGTTTTCACATGGCAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTGCAAAGTTTTGTAAAAGATCAGTCCCTTCTGATCTCAGAAAAAGGGGTCCTCGCTGACAAGATCAGTCCCGGGGTGCTCAAGGCTTTAGTGACATTGACAGACAAACCCAAATGA TTCAAAACGACACAGTTTCAGCCCGCTCTGTGAAATAACAAACCAAAGAAAGAGAAAGCCCTAGGCCCTTTCATCTTCTTCTTCCTCTTCACGCCTGCTACTCCTCCCATCCAGCAGCGTAGTGTCGCCGTGTCCGTCTTAGCGGCCTGCAGTGGTTCATTGTTGCTTCTGGTGGGAATAAAATGAACGAGACAATGATACAATTTCAACAGAGCTTAATTGAGCTAGAAACGGAAGCAGAGCGTCTCCTTATAGCCCGCAATGAGTTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCGTTGACTGCTTTGAGGAGGCGAGCACGGACAACAAAATCCAGTGTCCCATCACCTTTTGAGTCAATTATGAAGGATATGGGAGGTTCTGAAACAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGCACCTGGATGATGTTCCCAGGAACCGATGTGTTCGCCAGGGTTCCATTTCATGCTGCTCATTCAATCTTGGAGACAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTGCAAAGTTTTGTAAAAGATCAGTCCCTTCTGATCTCAGAAAAAGGGGTCCTCGCTGACAAGATCAGTCCCGGGGTGCTCAAGGCTTTAGTGACATTGACAGACAAACCCAAATGA ATGAACGAGACAATGATACAATTTCAACAGAGCTTAATTGAGCTAGAAACGGAAGCAGAGCGTCTCCTTATAGCCCGCAATGAGTTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCGTTGACTGCTTTGAGGAGGCGAGCACGGACAACAAAATCCAGTGTCCCATCACCTTTTGAGTCAATTATGAAGGATATGGGAGGTTCTGAAACAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGCACCTGGATGATGTTCCCAGGAACCGATGTGTTCGCCAGGGTTCCATTTCATGCTGCTCATTCAATCTTGGAGACAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTGCAAAGTTTTGTAAAAGATCAGTCCCTTCTGATCTCAGAAAAAGGGGTCCTCGCTGACAAGATCAGTCCCGGGGTGCTCAAGGCTTTAGTGACATTGACAGACAAACCCAAATGA MNETMIQFQQSLIELETEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQSKLDFEAKKLQSFVKDQSLLISEKGVLADKISPGVLKALVTLTDKPK
BLAST of CmaCh06G009670 vs. TrEMBL
Match: A0A0A0L6Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.3e-78 Identity = 152/166 (91.57%), Postives = 162/166 (97.59%), Query Frame = 1
BLAST of CmaCh06G009670 vs. TrEMBL
Match: W9QHV2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 6.6e-70 Identity = 132/166 (79.52%), Postives = 157/166 (94.58%), Query Frame = 1
BLAST of CmaCh06G009670 vs. TrEMBL
Match: V4U8R1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022588mg PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.5e-69 Identity = 134/166 (80.72%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of CmaCh06G009670 vs. TrEMBL
Match: A0A067H1A3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031062mg PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 4.2e-69 Identity = 134/166 (80.72%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of CmaCh06G009670 vs. TrEMBL
Match: A0A059CIW8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02506 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 9.5e-69 Identity = 129/166 (77.71%), Postives = 156/166 (93.98%), Query Frame = 1
BLAST of CmaCh06G009670 vs. TAIR10
Match: AT3G15351.1 (AT3G15351.1 unknown protein) HSP 1 Score: 212.2 bits (539), Expect = 2.4e-55 Identity = 100/159 (62.89%), Postives = 133/159 (83.65%), Query Frame = 1
BLAST of CmaCh06G009670 vs. NCBI nr
Match: gi|659074783|ref|XP_008437793.1| (PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo]) HSP 1 Score: 303.5 bits (776), Expect = 2.2e-79 Identity = 154/166 (92.77%), Postives = 162/166 (97.59%), Query Frame = 1
BLAST of CmaCh06G009670 vs. NCBI nr
Match: gi|449431974|ref|XP_004133775.1| (PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus]) HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78 Identity = 152/166 (91.57%), Postives = 162/166 (97.59%), Query Frame = 1
BLAST of CmaCh06G009670 vs. NCBI nr
Match: gi|700201229|gb|KGN56362.1| (hypothetical protein Csa_3G117970 [Cucumis sativus]) HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78 Identity = 152/166 (91.57%), Postives = 162/166 (97.59%), Query Frame = 1
BLAST of CmaCh06G009670 vs. NCBI nr
Match: gi|1009143797|ref|XP_015889451.1| (PREDICTED: uncharacterized protein LOC107424226 [Ziziphus jujuba]) HSP 1 Score: 275.8 bits (704), Expect = 5.0e-71 Identity = 137/164 (83.54%), Postives = 154/164 (93.90%), Query Frame = 1
BLAST of CmaCh06G009670 vs. NCBI nr
Match: gi|703072343|ref|XP_010089260.1| (hypothetical protein L484_021790 [Morus notabilis]) HSP 1 Score: 271.6 bits (693), Expect = 9.4e-70 Identity = 132/166 (79.52%), Postives = 157/166 (94.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|