Lsi05G012630 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G012630
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionLOB domain-containing protein 23
Locationchr05 : 20403274 .. 20403957 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTTGGTCGTTGTGCGGCTTGTAAATATTTGAGAAGAAGATGTCCTTCGGATTGCATTTTTTCTCCTTTCTTTCCTTCCAATAATCCTCAAAGATTTGCCATTGTTCATCGAATTTATGGTGCAAGTAATGTCGCTAAATTTCTCCATGTAAGTTTATATTTTATCTTCCACCTACCTTTTTAATTCTATATCATATCATATCTTTTCTTTCCATCATTCCATGCTTTTTTATTTACTATTTTATTCATAAACATATCTCACCACGTCACTTAATTCTTCCAAACAACTTAATTATATAACTAAGATATTTTTTATAATTATATTACAATACTTGGAGAATTAACACTCTCTTTTTTTGGCTAATTTAATCAGCAACTTCCTGCACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAAGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTCAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGCATTTGAGCCCATCCAAGGCCCAAATAGTATCGAATTCTCTCACATTGGGCTTTCCACTCCGGCCCATTTTTTTAATTCTACCTTTTCTAATTCATAA

mRNA sequence

ATGATTTTTGGTCGTTGTGCGGCTTGTAAATATTTGAGAAGAAGATGTCCTTCGGATTGCATTTTTTCTCCTTTCTTTCCTTCCAATAATCCTCAAAGATTTGCCATTGTTCATCGAATTTATGGTGCAAGTAATGTCGCTAAATTTCTCCATCAACTTCCTGCACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAAGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTCAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGCATTTGAGCCCATCCAAGGCCCAAATAGTATCGAATTCTCTCACATTGGGCTTTCCACTCCGGCCCATTTTTTTAATTCTACCTTTTCTAATTCATAA

Coding sequence (CDS)

ATGATTTTTGGTCGTTGTGCGGCTTGTAAATATTTGAGAAGAAGATGTCCTTCGGATTGCATTTTTTCTCCTTTCTTTCCTTCCAATAATCCTCAAAGATTTGCCATTGTTCATCGAATTTATGGTGCAAGTAATGTCGCTAAATTTCTCCATCAACTTCCTGCACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAAGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTCAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGCATTTGAGCCCATCCAAGGCCCAAATAGTATCGAATTCTCTCACATTGGGCTTTCCACTCCGGCCCATTTTTTTAATTCTACCTTTTCTAATTCATAA

Protein sequence

MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTFSNS
Homology
[Close]
BLAST of Lsi05G012630 vs. Swiss-Prot
Match: LBD23_ARATH (LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.9e-39
Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+IA   + + +  + DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]
BLAST of Lsi05G012630 vs. Swiss-Prot
Match: LBD24_ARATH (LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.9e-39
Identity = 73/116 (62.93%), Postives = 90/116 (77.59%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+IA   + + + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]
BLAST of Lsi05G012630 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 5.5e-32
Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETL 65
           CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP H RA+A  +L
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQ 119
            FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +A+I C+     EP LQ
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ-NEPTLQ 120

[Close]
BLAST of Lsi05G012630 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-30
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +A++  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]
BLAST of Lsi05G012630 vs. Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-28
Identity = 52/101 (51.49%), Postives = 77/101 (76.24%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETL 65
           CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L ++ R +A  +L
Sbjct: 8   CAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSL 67

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIA 107
           F+EA+ R+ DPVYGCVG+IS LQH+L      L   + ++A
Sbjct: 68  FYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]
BLAST of Lsi05G012630 vs. TrEMBL
Match: A0A0A0L9N7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180300 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.4e-73
Identity = 137/150 (91.33%), Postives = 141/150 (94.00%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQE-PQLQD 120
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRA+IAC+ASNVQE PQ QD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAFEPIQGPNSIEFSHIGLSTPAHFFNSTF 150
           FAFEPIQGPNS+ FS IGLSTPAH FNSTF
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNSTF 150

[Close]
BLAST of Lsi05G012630 vs. TrEMBL
Match: A0A0A0LLX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373510 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 7.1e-55
Identity = 112/150 (74.67%), Postives = 123/150 (82.00%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P  LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDF 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASN Q+ Q +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 AF-EPIQGPNSIEFSHIGLSTPAHFFNSTF 150
            F +P  GP        GLSTPAHF    F
Sbjct: 121 PFDDPSSGP-----IFTGLSTPAHFSEQLF 145

[Close]
BLAST of Lsi05G012630 vs. TrEMBL
Match: A0A061FP58_THECC (LOB domain-containing protein 23 OS=Theobroma cacao GN=TCM_035123 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-45
Identity = 87/121 (71.90%), Postives = 100/121 (82.64%), Query Frame = 1 

Query: 4   GRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAE 63
           GRCAAC+YLRRRCP DCIFSP+FPSNNPQRF  +HRIYGASNVAK L QLP HLRAEAA+
Sbjct: 4   GRCAACRYLRRRCPPDCIFSPYFPSNNPQRFVSIHRIYGASNVAKLLQQLPTHLRAEAAD 63

Query: 64  TLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDFAFE 123
           +L+FEA+CR+EDPVYGCVG+I  LQ Q+H A +QLAKT+A+IA L S  Q PQ Q    E
Sbjct: 64  SLYFEAQCRVEDPVYGCVGLIFLLQQQIHNAVSQLAKTQAEIAVLKSQAQHPQAQQVEVE 123

Query: 124 P 125
           P
Sbjct: 124 P 124

[Close]
BLAST of Lsi05G012630 vs. TrEMBL
Match: B9I4F9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13910g PE=4 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-45
Identity = 91/120 (75.83%), Postives = 103/120 (85.83%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           MI GRCAACKYLRRRCPSDCIFSP+FPSNNPQRFA VHRIYGASNVAK L QLPAHLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPYFPSNNPQRFACVHRIYGASNVAKMLQQLPAHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEP-QLQD 120
           AA +L++EA+ R +DPVYGCVGIIS L  Q+H  E+QLAKT+A+IA L S  QEP Q+Q+
Sbjct: 61  AANSLYYEAQSRTQDPVYGCVGIISLLHQQIHGVESQLAKTKAEIAVLNSLAQEPAQIQE 120

[Close]
BLAST of Lsi05G012630 vs. TrEMBL
Match: A0A0B0PT25_GOSAR (LOB domain-containing 24-like protein OS=Gossypium arboreum GN=F383_07421 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43
Identity = 86/131 (65.65%), Postives = 103/131 (78.63%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           M  GRCAAC+YLRRRC  DCI SP+FPSNNPQRFA VHRIYGASNV K L +LP HLR+E
Sbjct: 1   MSSGRCAACRYLRRRCTQDCILSPYFPSNNPQRFASVHRIYGASNVTKLLQRLPTHLRSE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDF 120
           AA++L+FEA+CR+EDPVYGCVG+I  LQ Q+H AE+QL KT+A+IA + S  Q PQ Q  
Sbjct: 61  AADSLYFEAQCRLEDPVYGCVGLIFLLQQQIHSAESQLIKTQAEIAVMKSQTQHPQTQ-- 120

Query: 121 AFEPIQGPNSI 132
            F  I G N++
Sbjct: 121 PFRAISGSNNL 129

[Close]
BLAST of Lsi05G012630 vs. TAIR10
Match: AT3G26620.1 (AT3G26620.1 LOB domain-containing protein 23)

HSP 1 Score: 161.4 bits (407), Expect = 4.4e-40
Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+IA   + + +  + DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]
BLAST of Lsi05G012630 vs. TAIR10
Match: AT3G26660.1 (AT3G26660.1 LOB domain-containing protein 24)

HSP 1 Score: 161.4 bits (407), Expect = 4.4e-40
Identity = 73/116 (62.93%), Postives = 90/116 (77.59%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+IA   + + + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]
BLAST of Lsi05G012630 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-33
Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETL 65
           CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP H RA+A  +L
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQ 119
            FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +A+I C+     EP LQ
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ-NEPTLQ 120

[Close]
BLAST of Lsi05G012630 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 133.7 bits (335), Expect = 9.9e-32
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +A++  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]
BLAST of Lsi05G012630 vs. TAIR10
Match: AT5G66870.1 (AT5G66870.1 ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 125.9 bits (315), Expect = 2.1e-29
Identity = 52/101 (51.49%), Postives = 77/101 (76.24%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETL 65
           CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L ++ R +A  +L
Sbjct: 8   CAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSL 67

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIA 107
           F+EA+ R+ DPVYGCVG+IS LQH+L      L   + ++A
Sbjct: 68  FYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]
BLAST of Lsi05G012630 vs. NCBI nr
Match: gi|449446189|ref|XP_004140854.1| (PREDICTED: LOB domain-containing protein 24-like [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 6.4e-73
Identity = 137/150 (91.33%), Postives = 141/150 (94.00%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQE-PQLQD 120
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRA+IAC+ASNVQE PQ QD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAFEPIQGPNSIEFSHIGLSTPAHFFNSTF 150
           FAFEPIQGPNS+ FS IGLSTPAH FNSTF
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNSTF 150

[Close]
BLAST of Lsi05G012630 vs. NCBI nr
Match: gi|659077366|ref|XP_008439169.1| (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 135/151 (89.40%), Postives = 141/151 (93.38%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQE--PQLQ 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRA+IAC+ASNVQE  PQLQ
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF 150
           DFAF+PIQGPNS+ FS IGLS+PAH FNS+F
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSF 151

[Close]
BLAST of Lsi05G012630 vs. NCBI nr
Match: gi|659089563|ref|XP_008445577.1| (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 224.9 bits (572), Expect = 9.2e-56
Identity = 116/155 (74.84%), Postives = 131/155 (84.52%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P  +R E
Sbjct: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQ--LQ 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAQIA LASN+Q+ Q   Q
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120

Query: 121 DFAF-EPIQGPNSIEFSHIGLSTPAHFFNSTFSNS 153
            FAF +P  GP       IGLSTPAH+ +S+FS+S
Sbjct: 121 AFAFDDPSSGPIC-----IGLSTPAHWLHSSFSDS 150

[Close]
BLAST of Lsi05G012630 vs. NCBI nr
Match: gi|700207689|gb|KGN62808.1| (hypothetical protein Csa_2G373510 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-54
Identity = 112/150 (74.67%), Postives = 123/150 (82.00%), Query Frame = 1 

Query: 1   MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P  LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDF 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASN Q+ Q +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 AF-EPIQGPNSIEFSHIGLSTPAHFFNSTF 150
            F +P  GP        GLSTPAHF    F
Sbjct: 121 PFDDPSSGP-----IFTGLSTPAHFSEQLF 145

[Close]
BLAST of Lsi05G012630 vs. NCBI nr
Match: gi|590599069|ref|XP_007019079.1| (LOB domain-containing protein 23 [Theobroma cacao])

HSP 1 Score: 189.9 bits (481), Expect = 3.3e-45
Identity = 87/121 (71.90%), Postives = 100/121 (82.64%), Query Frame = 1 

Query: 4   GRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAE 63
           GRCAAC+YLRRRCP DCIFSP+FPSNNPQRF  +HRIYGASNVAK L QLP HLRAEAA+
Sbjct: 4   GRCAACRYLRRRCPPDCIFSPYFPSNNPQRFVSIHRIYGASNVAKLLQQLPTHLRAEAAD 63

Query: 64  TLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLASNVQEPQLQDFAFE 123
           +L+FEA+CR+EDPVYGCVG+I  LQ Q+H A +QLAKT+A+IA L S  Q PQ Q    E
Sbjct: 64  SLYFEAQCRVEDPVYGCVGLIFLLQQQIHNAVSQLAKTQAEIAVLKSQAQHPQAQQVEVE 123

Query: 124 P 125
           P
Sbjct: 124 P 124

The following BLAST results are available for this feature:
BLAST of Lsi05G012630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD23_ARATH7.9e-3962.07LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23 PE=2 SV=1[more]
LBD24_ARATH7.9e-3962.93LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24 PE=2 SV=1[more]
LBD12_ARATH5.5e-3255.75LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD4_ARATH1.8e-3056.31LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD36_ARATH3.7e-2851.49LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1[more]
BLAST of Lsi05G012630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9N7_CUCSA4.4e-7391.33Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180300 PE=4 SV=1[more]
A0A0A0LLX6_CUCSA7.1e-5574.67Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373510 PE=4 SV=1[more]
A0A061FP58_THECC2.3e-4571.90LOB domain-containing protein 23 OS=Theobroma cacao GN=TCM_035123 PE=4 SV=1[more]
B9I4F9_POPTR8.7e-4575.83Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13910g PE=4 SV=2[more]
A0A0B0PT25_GOSAR2.1e-4365.65LOB domain-containing 24-like protein OS=Gossypium arboreum GN=F383_07421 PE=4 S... [more]
BLAST of Lsi05G012630 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G26620.14.4e-4062.07 LOB domain-containing protein 23[more]
AT3G26660.14.4e-4062.93 LOB domain-containing protein 24[more]
AT2G30130.13.1e-3355.75 Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.19.9e-3256.31 LOB domain-containing protein 4[more]
AT5G66870.12.1e-2951.49 ASYMMETRIC LEAVES 2-like 1[more]
BLAST of Lsi05G012630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446189|ref|XP_004140854.1|6.4e-7391.33PREDICTED: LOB domain-containing protein 24-like [Cucumis sativus][more]
gi|659077366|ref|XP_008439169.1|3.2e-7289.40PREDICTED: LOB domain-containing protein 24-like [Cucumis melo][more]
gi|659089563|ref|XP_008445577.1|9.2e-5674.84PREDICTED: LOB domain-containing protein 24-like [Cucumis melo][more]
gi|700207689|gb|KGN62808.1|1.0e-5474.67hypothetical protein Csa_2G373510 [Cucumis sativus][more]
gi|590599069|ref|XP_007019079.1|3.3e-4571.90LOB domain-containing protein 23 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G012630.1Lsi05G012630.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 5..102
score: 1.3
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 4..105
score: 24
NoneNo IPR availableunknownCoilCoilcoord: 84..104
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 5..116
score: 3.8
NoneNo IPR availablePANTHERPTHR31301:SF13LOB DOMAIN-CONTAINING PROTEIN 23-RELATEDcoord: 5..116
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G012630Csa3G180300Cucumber (Chinese Long) v2culsiB210
Lsi05G012630CSPI03G16590Wild cucumber (PI 183967)cpilsiB208
Lsi05G012630Cucsa.250990Cucumber (Gy14) v1cgylsiB416
Lsi05G012630CmoCh16G001570Cucurbita moschata (Rifu)cmolsiB300
Lsi05G012630ClCG05G007800Watermelon (Charleston Gray)lsiwcgB336
Lsi05G012630MELO3C031638.2Melon (DHL92) v3.6.1lsimedB397
Lsi05G012630Cla97C05G089760Watermelon (97103) v2lsiwmbB334
Lsi05G012630Cp4.1LG14g05950Cucurbita pepo (Zucchini)cpelsiB172
Lsi05G012630CsGy3G016710Cucumber (Gy14) v2cgyblsiB197
Lsi05G012630Carg16701Silver-seed gourdcarlsiB791
Lsi05G012630CsaV3_3G016790Cucumber (Chinese Long) v3cuclsiB229
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G012630Bottle gourd (USVL1VR-Ls)lsilsiB008
Lsi05G012630Bottle gourd (USVL1VR-Ls)lsilsiB160
Lsi05G012630Cucumber (Gy14) v1cgylsiB490
Lsi05G012630Cucumber (Gy14) v1cgylsiB587
Lsi05G012630Cucurbita maxima (Rimu)cmalsiB288
Lsi05G012630Cucurbita maxima (Rimu)cmalsiB312
Lsi05G012630Cucurbita maxima (Rimu)cmalsiB387
Lsi05G012630Cucurbita maxima (Rimu)cmalsiB580
Lsi05G012630Cucurbita maxima (Rimu)cmalsiB836
Lsi05G012630Cucurbita moschata (Rifu)cmolsiB277
Lsi05G012630Cucurbita moschata (Rifu)cmolsiB372
Lsi05G012630Cucurbita moschata (Rifu)cmolsiB560
Lsi05G012630Cucurbita moschata (Rifu)cmolsiB570
Lsi05G012630Cucurbita pepo (Zucchini)cpelsiB035
Lsi05G012630Cucurbita pepo (Zucchini)cpelsiB153
Lsi05G012630Cucurbita pepo (Zucchini)cpelsiB624
Lsi05G012630Wild cucumber (PI 183967)cpilsiB379
Lsi05G012630Wild cucumber (PI 183967)cpilsiB384
Lsi05G012630Wild cucumber (PI 183967)cpilsiB469
Lsi05G012630Cucumber (Chinese Long) v2culsiB376
Lsi05G012630Cucumber (Chinese Long) v2culsiB380
Lsi05G012630Cucumber (Chinese Long) v2culsiB461
Lsi05G012630Melon (DHL92) v3.5.1lsimeB340
Lsi05G012630Melon (DHL92) v3.5.1lsimeB345
Lsi05G012630Melon (DHL92) v3.5.1lsimeB379
Lsi05G012630Watermelon (Charleston Gray)lsiwcgB322
Lsi05G012630Watermelon (Charleston Gray)lsiwcgB328
Lsi05G012630Watermelon (97103) v1lsiwmB366
Lsi05G012630Watermelon (97103) v1lsiwmB373
Lsi05G012630Cucumber (Gy14) v2cgyblsiB342
Lsi05G012630Cucumber (Gy14) v2cgyblsiB346
Lsi05G012630Melon (DHL92) v3.6.1lsimedB356
Lsi05G012630Melon (DHL92) v3.6.1lsimedB357
Lsi05G012630Melon (DHL92) v3.6.1lsimedB362
Lsi05G012630Silver-seed gourdcarlsiB006
Lsi05G012630Silver-seed gourdcarlsiB841
Lsi05G012630Silver-seed gourdcarlsiB852
Lsi05G012630Cucumber (Chinese Long) v3cuclsiB405
Lsi05G012630Cucumber (Chinese Long) v3cuclsiB399
Lsi05G012630Cucumber (Chinese Long) v3cuclsiB490
Lsi05G012630Watermelon (97103) v2lsiwmbB315
Lsi05G012630Watermelon (97103) v2lsiwmbB331
Lsi05G012630Watermelon (97103) v2lsiwmbB343
Lsi05G012630Wax gourdlsiwgoB426
Lsi05G012630Wax gourdlsiwgoB434