Cla97C05G089760 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G089760
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	LOB domain-containing protein 24-like
Location	Cla97Chr05 : 7984065 .. 7984779 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCATTTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATGTAAGTTTATATTTCATCTTCCCCCTACCTTTTTAATTCCTATATCATACAATATCTTTTCTTTCCATTATTTCTATGCTTTTTTTATTTACTATTTTATTCATAAACCTACCTCACCACGTTATTCAACTCTTCCAAACAACTTAATAATCTATTTTAATCTATTTAAAGTGATTTCTTAGTATTTAATTTACTTTATACCAAGTTCTTTTTAATAAGTATATATATAATACTTGGAGACTTAACATTCTTTTTTGACTAATTTAATCAGCAACTTCCTACACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAGGCAAAATGCAGAATCGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTATTGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTAAATTCATAA

mRNA sequence

ATGATTTCGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCATTTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAGGCAAAATGCAGAATCGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTATTGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTAAATTCATAA

Coding sequence (CDS)

ATGATTTCGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCATTTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAGGCAAAATGCAGAATCGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTATTGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTAAATTCATAA

Protein sequence

MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFLNS

Homology

[Close]

BLAST of Cla97C05G089760 vs. NCBI nr
Match: XP_004140854.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis sativus] >KGN57342.1 hypothetical protein Csa_3G180300 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 4.9e-74
Identity = 137/148 (92.57%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE-PQLQD 120
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIAC+ASNVQE PQ QD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FVFEPIQGPNTIGFSQIGLSTPAHFLNS 148
           F FEPIQGPN++GFSQIGLSTPAH  NS
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNS 148

[Close]

BLAST of Cla97C05G089760 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 8.3e-74
Identity = 136/149 (91.28%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE--PQLQ 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAC+ASNVQE  PQLQ
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFVFEPIQGPNTIGFSQIGLSTPAHFLNS 148
           DF F+PIQGPN++GFSQIGLS+PAH  NS
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149

[Close]

BLAST of Cla97C05G089760 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.4 bits (716), Expect = 3.5e-72
Identity = 134/147 (91.16%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 120
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+QE Q QDF
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120

Query: 121 VFEPIQGPNTIGFSQIGLSTPAHFLNS 148
             +PIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of Cla97C05G089760 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 279.3 bits (713), Expect = 7.8e-72
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNV-QEPQLQD 120
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+ QE Q QD
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 121 FVFEPIQGPNTIGFSQIGLSTPAHFLNS 148
           F  EPIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 FAVEPIQGPNTIGFSQIGLSTPAHWFNS 148

[Close]

BLAST of Cla97C05G089760 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata])

HSP 1 Score: 273.5 bits (698), Expect = 4.3e-70
Identity = 131/147 (89.12%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRC +DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 120
           AAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+QE Q  DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 VFEPIQGPNTIGFSQIGLSTPAHFLNS 148
             +PIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of Cla97C05G089760 vs. TrEMBL
Match: tr|A0A0A0L9N7|A0A0A0L9N7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.2e-74
Identity = 137/148 (92.57%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE-PQLQD 120
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIAC+ASNVQE PQ QD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FVFEPIQGPNTIGFSQIGLSTPAHFLNS 148
           F FEPIQGPN++GFSQIGLSTPAH  NS
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNS 148

[Close]

BLAST of Cla97C05G089760 vs. TrEMBL
Match: tr|A0A1S3AY36|A0A1S3AY36_CUCME (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.5e-74
Identity = 136/149 (91.28%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE--PQLQ 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAC+ASNVQE  PQLQ
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFVFEPIQGPNTIGFSQIGLSTPAHFLNS 148
           DF F+PIQGPN++GFSQIGLS+PAH  NS
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149

[Close]

BLAST of Cla97C05G089760 vs. TrEMBL
Match: tr|A0A0A0LLX6|A0A0A0LLX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54
Identity = 110/145 (75.86%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MI  RCAACKYLRRRC ++CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+ Q +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 VF-EPIQGPNTIGFSQIGLSTPAHF 145
            F +P  GP        GLSTPAHF
Sbjct: 121 PFDDPSSGP-----IFTGLSTPAHF 140

[Close]

BLAST of Cla97C05G089760 vs. TrEMBL
Match: tr|A0A061FP58|A0A061FP58_THECC (LOB domain-containing protein 23 OS=Theobroma cacao OX=3641 GN=TCM_035123 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.7e-47
Identity = 91/124 (73.39%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           M SGRCAAC+YLRRRCP DCIFSP+FPSNNPQRF  +HRIYGASNVAK L QLPTHLRAE
Sbjct: 1   MNSGRCAACRYLRRRCPPDCIFSPYFPSNNPQRFVSIHRIYGASNVAKLLQQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 120
           AA++L+FEA+CR+EDPVYGCVG+I  LQ Q+H A +QLAKT+AEIA L S  Q PQ Q  
Sbjct: 61  AADSLYFEAQCRVEDPVYGCVGLIFLLQQQIHNAVSQLAKTQAEIAVLKSQAQHPQAQQV 120

Query: 121 VFEP 125
             EP
Sbjct: 121 EVEP 124

[Close]

BLAST of Cla97C05G089760 vs. TrEMBL
Match: tr|B9I4F9|B9I4F9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G133700v3 PE=4 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 90/120 (75.00%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60
           MISGRCAACKYLRRRCP+DCIFSP+FPSNNPQRF  VHRIYGASNVAK L QLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPYFPSNNPQRFACVHRIYGASNVAKMLQQLPAHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEP-QLQD 120
           AA +L++EA+ R +DPVYGCVGIIS L  Q+H  E+QLAKT+AEIA L S  QEP Q+Q+
Sbjct: 61  AANSLYYEAQSRTQDPVYGCVGIISLLHQQIHGVESQLAKTKAEIAVLNSLAQEPAQIQE 120

[Close]

BLAST of Cla97C05G089760 vs. Swiss-Prot
Match: sp|P59467|LBD23_ARATH (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-33
Identity = 65/98 (66.33%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 5   RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR 103
           L FEAKCR++DPVYGCVGII       H+ +TQ+ KT+
Sbjct: 65  LCFEAKCRVDDPVYGCVGII-------HLLKTQIQKTQ 95

[Close]

BLAST of Cla97C05G089760 vs. Swiss-Prot
Match: sp|P59468|LBD24_ARATH (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-33
Identity = 65/97 (67.01%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 5   RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKT 102
           L FEAKCR++DPVYGCVGII       H+ +TQ+ KT
Sbjct: 65  LCFEAKCRVDDPVYGCVGII-------HLLKTQIQKT 94

[Close]

BLAST of Cla97C05G089760 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-32
Identity = 64/116 (55.17%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQ 119
            +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI C+     EP LQ
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ-NEPTLQ 120

[Close]

BLAST of Cla97C05G089760 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-30
Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 6   CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of Cla97C05G089760 vs. Swiss-Prot
Match: sp|Q9FKZ3|LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 53/104 (50.96%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]

BLAST of Cla97C05G089760 vs. TAIR10
Match: AT3G26620.1 (LOB domain-containing protein 23)

HSP 1 Score: 144.1 bits (362), Expect = 7.1e-35
Identity = 65/98 (66.33%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 5   RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR 103
           L FEAKCR++DPVYGCVGII       H+ +TQ+ KT+
Sbjct: 65  LCFEAKCRVDDPVYGCVGII-------HLLKTQIQKTQ 95

[Close]

BLAST of Cla97C05G089760 vs. TAIR10
Match: AT3G26660.1 (LOB domain-containing protein 24)

HSP 1 Score: 143.7 bits (361), Expect = 9.2e-35
Identity = 65/97 (67.01%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 5   RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKT 102
           L FEAKCR++DPVYGCVGII       H+ +TQ+ KT
Sbjct: 65  LCFEAKCRVDDPVYGCVGII-------HLLKTQIQKT 94

[Close]

BLAST of Cla97C05G089760 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 64/116 (55.17%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQ 119
            +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI C+     EP LQ
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ-NEPTLQ 120

[Close]

BLAST of Cla97C05G089760 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4)

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-31
Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 6   CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of Cla97C05G089760 vs. TAIR10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 127.1 bits (318), Expect = 8.9e-30
Identity = 53/104 (50.96%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

The following BLAST results are available for this feature:

BLAST of Cla97C05G089760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140854.1	4.9e-74	92.57	PREDICTED: LOB domain-containing protein 24-like [Cucumis sativus] >KGN57342.1 h...	[more]
XP_008439169.1	8.3e-74	91.28	PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]	[more]
XP_023522202.1	3.5e-72	91.16	LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985104.1	7.8e-72	91.89	LOB domain-containing protein 24-like [Cucurbita maxima]	[more]
XP_022923144.1	4.3e-70	89.12	LOB domain-containing protein 24-like [Cucurbita moschata]	[more]

BLAST of Cla97C05G089760 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9N7\|A0A0A0L9N7_CUCSA	3.2e-74	92.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=4 SV=1	[more]
tr\|A0A1S3AY36\|A0A1S3AY36_CUCME	5.5e-74	91.28	LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE...	[more]
tr\|A0A0A0LLX6\|A0A0A0LLX6_CUCSA	1.7e-54	75.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=4 SV=1	[more]
tr\|A0A061FP58\|A0A061FP58_THECC	5.7e-47	73.39	LOB domain-containing protein 23 OS=Theobroma cacao OX=3641 GN=TCM_035123 PE=4 S...	[more]
tr\|B9I4F9\|B9I4F9_POPTR	1.2e-44	75.00	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G133700v3 PE=...	[more]

BLAST of Cla97C05G089760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P59467\|LBD23_ARATH	1.3e-33	66.33	LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S...	[more]
sp\|P59468\|LBD24_ARATH	1.7e-33	67.01	LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S...	[more]
sp\|Q8LBW3\|LBD12_ARATH	2.4e-32	55.17	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
sp\|Q9SHE9\|LBD4_ARATH	2.3e-30	56.31	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
sp\|Q9FKZ3\|LBD36_ARATH	1.6e-28	50.96	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]

BLAST of Cla97C05G089760 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26620.1	7.1e-35	66.33	LOB domain-containing protein 23	[more]
AT3G26660.1	9.2e-35	67.01	LOB domain-containing protein 24	[more]
AT2G30130.1	1.3e-33	55.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.2e-31	56.31	LOB domain-containing protein 4	[more]
AT5G66870.1	8.9e-30	50.96	ASYMMETRIC LEAVES 2-like 1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G089760.1	Cla97C05G089760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	PANTHER	PTHR31301:SF13	LOB DOMAIN-CONTAINING PROTEIN 23-RELATED	coord: 2..114
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 2..114
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 5..102 e-value: 1.2E-38 score: 131.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 4..105 score: 24.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G089760	Csa3G180300	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G089760	ClCG05G007800	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G089760	CSPI03G16590	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G089760	Cucsa.250990	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G089760	Lsi05G012630	Bottle gourd (USVL1VR-Ls)	lsiwmbB334
Cla97C05G089760	CsGy3G016710	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G089760	MELO3C031638.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G089760	Carg16701	Silver-seed gourd	carwmbB0910
Cla97C05G089760	CsaV3_3G016790	Cucumber (Chinese Long) v3	cucwmbB206

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G089760	Watermelon (97103) v2	wmbwmbB023
Cla97C05G089760	Watermelon (97103) v2	wmbwmbB130
Cla97C05G089760	Silver-seed gourd	carwmbB0006
Cla97C05G089760	Silver-seed gourd	carwmbB0743
Cla97C05G089760	Silver-seed gourd	carwmbB0969
Cla97C05G089760	Silver-seed gourd	carwmbB0984
Cla97C05G089760	Cucumber (Gy14) v2	cgybwmbB367
Cla97C05G089760	Cucumber (Gy14) v1	cgywmbB522
Cla97C05G089760	Cucurbita maxima (Rimu)	cmawmbB304
Cla97C05G089760	Cucurbita maxima (Rimu)	cmawmbB346
Cla97C05G089760	Cucurbita maxima (Rimu)	cmawmbB424
Cla97C05G089760	Cucurbita maxima (Rimu)	cmawmbB649
Cla97C05G089760	Cucurbita maxima (Rimu)	cmawmbB651
Cla97C05G089760	Cucurbita moschata (Rifu)	cmowmbB286
Cla97C05G089760	Cucurbita moschata (Rifu)	cmowmbB331
Cla97C05G089760	Cucurbita moschata (Rifu)	cmowmbB404
Cla97C05G089760	Cucurbita moschata (Rifu)	cmowmbB621
Cla97C05G089760	Cucurbita moschata (Rifu)	cmowmbB624
Cla97C05G089760	Wild cucumber (PI 183967)	cpiwmbB404
Cla97C05G089760	Cucumber (Chinese Long) v3	cucwmbB400
Cla97C05G089760	Cucumber (Chinese Long) v2	cuwmbB386
Cla97C05G089760	Bottle gourd (USVL1VR-Ls)	lsiwmbB022
Cla97C05G089760	Melon (DHL92) v3.6.1	medwmbB021
Cla97C05G089760	Melon (DHL92) v3.5.1	mewmbB024
Cla97C05G089760	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G089760	Watermelon (Charleston Gray)	wcgwmbB109
Cla97C05G089760	Watermelon (97103) v1	wmwmbB206
Cla97C05G089760	Watermelon (97103) v1	wmwmbB269
Cla97C05G089760	Wax gourd	wgowmbB075
Cla97C05G089760	Wax gourd	wgowmbB192