Cp4.1LG14g05950 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g05950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain-containing protein, putative
LocationCp4.1LG14 : 687641 .. 688808 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTAGCATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATGTAATTTCTTCTTCCTTTTTTTATGAACTATTATGAGTTTCTGGTATTTAATTTAATTTGATATCATTTTACTTGATAATCAGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTGTAAACATGACAAAACTCCTTTCACTTCTTTTAAATCTTTTTTAGAATGAAAATGATAACATAGCTTCCAATTTTTTAAATCCTTGCTCCTCTTTCTTCATTTTGGTGCACGTCCCATTTACATCTCACTTTTCTCCGCTTAATAAACTTAAAAAATTCGTTTATAAGGAGGTGGAAACTTCTCTCTAATAGATACGAGAGGAATGAAAAATATGTTAATTGGAAGAATTTAGTCGGCAGTATAGTGTGGNTTCTTCTTCCTTTTTTTATGAACTATTATGAGTTTCTGGTATTTAATTTAATTTGATATCATTTTACTTGATAATCAGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTG

mRNA sequence

ATTCTAGCATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTG

Coding sequence (CDS)

ATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTG

Protein sequence

MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDFAVQPIQGPNTIGNSLCIYDPKQPKLCSLRQNAELKIQFMDVLELFLNYNINYTWQKPSWPKLGLRLHFSLPTSKKPNHKILQFSPFKAQILLGSLRLGFPLQPIGLIHSTL
Homology
[Close]
BLAST of Cp4.1LG14g05950 vs. Swiss-Prot
Match: LBD24_ARATH (LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.4e-39
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]
BLAST of Cp4.1LG14g05950 vs. Swiss-Prot
Match: LBD23_ARATH (LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-38
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L +    DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]
BLAST of Cp4.1LG14g05950 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-31
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP+H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]
BLAST of Cp4.1LG14g05950 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 1 

Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP+H R +A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI 106
            +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]
BLAST of Cp4.1LG14g05950 vs. Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 1 

Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L  + R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]
BLAST of Cp4.1LG14g05950 vs. TrEMBL
Match: A0A0A0L9N7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180300 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.3e-63
Identity = 120/135 (88.89%), Postives = 126/135 (93.33%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQE-AQPQD 120
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIA +ASN+QE  QPQD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAVQPIQGPNTIGNS 135
           FA +PIQGPN++G S
Sbjct: 121 FAFEPIQGPNSVGFS 135

[Close]
BLAST of Cp4.1LG14g05950 vs. TrEMBL
Match: A0A0A0LLX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373510 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.8e-53
Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+AQ +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 AV-QPIQGPNTIGNS 135
               P  GP   G S
Sbjct: 121 PFDDPSSGPIFTGLS 135

[Close]
BLAST of Cp4.1LG14g05950 vs. TrEMBL
Match: A0A061FP58_THECC (LOB domain-containing protein 23 OS=Theobroma cacao GN=TCM_035123 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.9e-45
Identity = 88/124 (70.97%), Postives = 101/124 (81.45%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           M SGRCAAC+YLRRRCP DCIFSP+FPSNNPQRF  +HRIYGASNVAK L QLP HLR E
Sbjct: 1   MNSGRCAACRYLRRRCPPDCIFSPYFPSNNPQRFVSIHRIYGASNVAKLLQQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AA++L+FEA+CR+EDPVYGCVG+I  LQ Q+H A +QLAKT+AEIA L S  Q  Q Q  
Sbjct: 61  AADSLYFEAQCRVEDPVYGCVGLIFLLQQQIHNAVSQLAKTQAEIAVLKSQAQHPQAQQV 120

Query: 121 AVQP 125
            V+P
Sbjct: 121 EVEP 124

[Close]
BLAST of Cp4.1LG14g05950 vs. TrEMBL
Match: B9I4F9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13910g PE=4 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 5.0e-44
Identity = 92/124 (74.19%), Postives = 103/124 (83.06%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSP+FPSNNPQRFA VHRIYGASNVAK L QLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPYFPSNNPQRFACVHRIYGASNVAKMLQQLPAHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQE-AQPQD 120
           AA +L++EA+ R +DPVYGCVGIIS L  Q+H  E+QLAKT+AEIA L S  QE AQ Q+
Sbjct: 61  AANSLYYEAQSRTQDPVYGCVGIISLLHQQIHGVESQLAKTKAEIAVLNSLAQEPAQIQE 120

Query: 121 FAVQ 124
             V+
Sbjct: 121 NEVE 124

[Close]
BLAST of Cp4.1LG14g05950 vs. TrEMBL
Match: A0A0B0PT25_GOSAR (LOB domain-containing 24-like protein OS=Gossypium arboreum GN=F383_07421 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.3e-43
Identity = 87/131 (66.41%), Postives = 102/131 (77.86%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           M SGRCAAC+YLRRRC  DCI SP+FPSNNPQRFA VHRIYGASNV K L +LP HLR E
Sbjct: 1   MSSGRCAACRYLRRRCTQDCILSPYFPSNNPQRFASVHRIYGASNVTKLLQRLPTHLRSE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AA++L+FEA+CR+EDPVYGCVG+I  LQ Q+H AE+QL KT+AEIA + S  Q  Q Q F
Sbjct: 61  AADSLYFEAQCRLEDPVYGCVGLIFLLQQQIHSAESQLIKTQAEIAVMKSQTQHPQTQPF 120

Query: 121 AVQPIQGPNTI 132
             + I G N +
Sbjct: 121 --RAISGSNNL 129

[Close]
BLAST of Cp4.1LG14g05950 vs. TAIR10
Match: AT3G26660.1 (AT3G26660.1 LOB domain-containing protein 24)

HSP 1 Score: 162.5 bits (410), Expect = 3.0e-40
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]
BLAST of Cp4.1LG14g05950 vs. TAIR10
Match: AT3G26620.1 (AT3G26620.1 LOB domain-containing protein 23)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 1 

Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L +    DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]
BLAST of Cp4.1LG14g05950 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 1 

Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP+H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]
BLAST of Cp4.1LG14g05950 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 1 

Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP+H R +A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI 106
            +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]
BLAST of Cp4.1LG14g05950 vs. TAIR10
Match: AT5G66870.1 (AT5G66870.1 ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 127.9 bits (320), Expect = 8.2e-30
Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 1 

Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L  + R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]
BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: gi|659077366|ref|XP_008439169.1| (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 3.1e-63
Identity = 122/136 (89.71%), Postives = 126/136 (92.65%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQP--Q 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+QE QP  Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAVQPIQGPNTIGNS 135
           DFA QPIQGPN++G S
Sbjct: 121 DFAFQPIQGPNSVGFS 136

[Close]
BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: gi|449446189|ref|XP_004140854.1| (PREDICTED: LOB domain-containing protein 24-like [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 9.1e-63
Identity = 120/135 (88.89%), Postives = 126/135 (93.33%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQE-AQPQD 120
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIA +ASN+QE  QPQD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAVQPIQGPNTIGNS 135
           FA +PIQGPN++G S
Sbjct: 121 FAFEPIQGPNSVGFS 135

[Close]
BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: gi|700207689|gb|KGN62808.1| (hypothetical protein Csa_2G373510 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+AQ +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 AV-QPIQGPNTIGNS 135
               P  GP   G S
Sbjct: 121 PFDDPSSGPIFTGLS 135

[Close]
BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: gi|659089563|ref|XP_008445577.1| (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 5.5e-52
Identity = 107/137 (78.10%), Postives = 118/137 (86.13%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ +R E
Sbjct: 1   MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQ--PQ 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRA+IA LASNLQ+AQ   Q
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQ 120

Query: 121 DFAV-QPIQGPNTIGNS 135
            FA   P  GP  IG S
Sbjct: 121 AFAFDDPSSGPICIGLS 137

[Close]
BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: gi|590599069|ref|XP_007019079.1| (LOB domain-containing protein 23 [Theobroma cacao])

HSP 1 Score: 189.1 bits (479), Expect = 8.5e-45
Identity = 88/124 (70.97%), Postives = 101/124 (81.45%), Query Frame = 1 

Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           M SGRCAAC+YLRRRCP DCIFSP+FPSNNPQRF  +HRIYGASNVAK L QLP HLR E
Sbjct: 1   MNSGRCAACRYLRRRCPPDCIFSPYFPSNNPQRFVSIHRIYGASNVAKLLQQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AA++L+FEA+CR+EDPVYGCVG+I  LQ Q+H A +QLAKT+AEIA L S  Q  Q Q  
Sbjct: 61  AADSLYFEAQCRVEDPVYGCVGLIFLLQQQIHNAVSQLAKTQAEIAVLKSQAQHPQAQQV 120

Query: 121 AVQP 125
            V+P
Sbjct: 121 EVEP 124

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g05950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD24_ARATH5.4e-3963.79LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24 PE=2 SV=1[more]
LBD23_ARATH2.7e-3862.93LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23 PE=2 SV=1[more]
LBD4_ARATH3.1e-3157.28LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD12_ARATH2.0e-3057.28LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD36_ARATH1.5e-2851.92LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1[more]
BLAST of Cp4.1LG14g05950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9N7_CUCSA6.3e-6388.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180300 PE=4 SV=1[more]
A0A0A0LLX6_CUCSA7.8e-5378.52Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373510 PE=4 SV=1[more]
A0A061FP58_THECC5.9e-4570.97LOB domain-containing protein 23 OS=Theobroma cacao GN=TCM_035123 PE=4 SV=1[more]
B9I4F9_POPTR5.0e-4474.19Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13910g PE=4 SV=2[more]
A0A0B0PT25_GOSAR4.3e-4366.41LOB domain-containing 24-like protein OS=Gossypium arboreum GN=F383_07421 PE=4 S... [more]
BLAST of Cp4.1LG14g05950 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G26660.13.0e-4063.79 LOB domain-containing protein 24[more]
AT3G26620.11.5e-3962.93 LOB domain-containing protein 23[more]
AT1G31320.11.8e-3257.28 LOB domain-containing protein 4[more]
AT2G30130.11.1e-3157.28 Lateral organ boundaries (LOB) domain family protein[more]
AT5G66870.18.2e-3051.92 ASYMMETRIC LEAVES 2-like 1[more]
BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077366|ref|XP_008439169.1|3.1e-6389.71PREDICTED: LOB domain-containing protein 24-like [Cucumis melo][more]
gi|449446189|ref|XP_004140854.1|9.1e-6388.89PREDICTED: LOB domain-containing protein 24-like [Cucumis sativus][more]
gi|700207689|gb|KGN62808.1|1.1e-5278.52hypothetical protein Csa_2G373510 [Cucumis sativus][more]
gi|659089563|ref|XP_008445577.1|5.5e-5278.10PREDICTED: LOB domain-containing protein 24-like [Cucumis melo][more]
gi|590599069|ref|XP_007019079.1|8.5e-4570.97LOB domain-containing protein 23 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g05950.1Cp4.1LG14g05950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 5..102
score: 7.7
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 4..105
score: 2
NoneNo IPR availableunknownCoilCoilcoord: 84..104
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 3..118
score: 1.7
NoneNo IPR availablePANTHERPTHR31301:SF13LOB DOMAIN-CONTAINING PROTEIN 23-RELATEDcoord: 3..118
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g05950Cucsa.250990Cucumber (Gy14) v1cgycpeB0673
Cp4.1LG14g05950Csa3G180300Cucumber (Chinese Long) v2cpecuB214
Cp4.1LG14g05950ClCG05G007800Watermelon (Charleston Gray)cpewcgB207
Cp4.1LG14g05950CSPI03G16590Wild cucumber (PI 183967)cpecpiB217
Cp4.1LG14g05950Lsi05G012630Bottle gourd (USVL1VR-Ls)cpelsiB172
Cp4.1LG14g05950MELO3C031638.2Melon (DHL92) v3.6.1cpemedB233
Cp4.1LG14g05950CsaV3_3G016790Cucumber (Chinese Long) v3cpecucB0257
Cp4.1LG14g05950CsGy3G016710Cucumber (Gy14) v2cgybcpeB327
Cp4.1LG14g05950Carg16701Silver-seed gourdcarcpeB1215
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g05950Wax gourdcpewgoB0290
Cp4.1LG14g05950Cucurbita pepo (Zucchini)cpecpeB023
Cp4.1LG14g05950Cucurbita pepo (Zucchini)cpecpeB232
Cp4.1LG14g05950Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG14g05950Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g05950Cucurbita maxima (Rimu)cmacpeB425
Cp4.1LG14g05950Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g05950Cucurbita moschata (Rifu)cmocpeB386
Cp4.1LG14g05950Cucurbita moschata (Rifu)cmocpeB557
Cp4.1LG14g05950Wild cucumber (PI 183967)cpecpiB229
Cp4.1LG14g05950Cucumber (Chinese Long) v2cpecuB226
Cp4.1LG14g05950Watermelon (Charleston Gray)cpewcgB202
Cp4.1LG14g05950Watermelon (97103) v1cpewmB227
Cp4.1LG14g05950Melon (DHL92) v3.5.1cpemeB181
Cp4.1LG14g05950Melon (DHL92) v3.5.1cpemeB190
Cp4.1LG14g05950Cucumber (Gy14) v2cgybcpeB746
Cp4.1LG14g05950Melon (DHL92) v3.6.1cpemedB219
Cp4.1LG14g05950Silver-seed gourdcarcpeB0009
Cp4.1LG14g05950Silver-seed gourdcarcpeB0998
Cp4.1LG14g05950Silver-seed gourdcarcpeB1272
Cp4.1LG14g05950Cucumber (Chinese Long) v3cpecucB0281