Lsi05G002020 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative
Location	chr05 : 2783765 .. 2787372 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATACACAGTGTCTCTCTCTACTCTCTACAAACAAAAAAAGAAGCAAAGGATTCACTGAAACAAGAAATCAAAGACAACCATGGAGGAAATGACGTCACGACCTCATGTCATGAACTCTCGCAACACGCAACGTCCTCTTCCACCGCCACCGTCAAGAACACCCGACAACAACAATCACCGTCCTCTTCCGCCTCCACCTTCAAGAGCTCCGCTCAATGTTCACAACACTCACCGTTCTCCTTCATTGCCACCGTCCAGGCCTAATTCCGACTCTCACAACACTCGCTATCCATCTCCGCCGTCGCCGCCTACCTCTCGTCGCCAACATTTTGGTTACGGCACGGCATCATCCTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGCTGCTGCTGCCTCTGCCTCCTCTTCTTCTTCATCGCTCTCCTCGCTCTCGCTATCGTCCTCGTCATTGTTCTCGCCGTCAAACCTAAAAAGCCTCAATTCGATCTCCAGCGAGTCGGCGTTCAATACATGGGGATAACCGCTCCAAATCTCTTCTCATTGTCTTCCTCTGACGCCGAGACCGCTGCGACAACGGCGACGTCCACCTCCGCATCGTTATCGCTTAACATTCGATTGCTGTTCACGGCGGTGAATCCTAACAAAGTCGGAATAAAGTACGGGAATTCGAGGTTCACAGTGATGTACCGAGGGATTCCGTTAGGGAAAGCGATAGTTCCTGGATTTTACCAAGAGGCACACAGTCAGAGAGAGGTGGAGGCGACGATCGCGGTGGATCGAGTGAATTTGCTTCAGGCGGACGCCGCCGATCTCATCAGAGACGCTTCGTTGAACGATCGAGTAGAACTGAGGGTTTTGGGGGAAGTTGGCGCCAGGATCCGCGTCTTGGATTTTGATTCGCCCGGCGTTCAGGTCAGTTCCCAATTTTTTTTTTTTTTTAATTAAATCAAATTATTTTAATTATTTAATTTTATTCGCTTTTGAATATTATGGAGCACGCACTTTACATTTCTAGATAATTGATTGATGGATTTTAGATTCTTTATAATGAATGAATATATTTTTGGATAAAAAAAAATGTGTGAAGGAATAAAAATTAGATGAAACTGACCCACAAAACAAAAGGTTTAGGGAAGTTCTAGTAAAAAAAAATTCACTTCATAAATTTATTACTTTAAATTATTATTATTATTATTATTATTTTGTGGAGTCCAGTTATTTTTGAAGTTATTGTTATTAATTTTTCACAAGTTATTTAAGAATAACTTTGATTGATTCGTTTTTTTCCCCCATTAGATGTGTGTGTAAATAAAATATTTGTCCAAGGTTTAATTCTAAAATGGATCTAAATTTCTGTTAAGATTATTAAGAAAAAAAATTTATATAATTCATAAGTCTAGATTCGAATTAGAATAGTTGAAAATATTTTTTTTAAAAAAAAAAAATTTAGAGATAAGAATAAAACTGAAAACTAATTTAAATCTATGAAAATCTTTCAGGTCTTCTCAACAAAAGTTGATTAGAAGACTAAATATGCATATACTCTCCAATAAAAGTTTAACCTCAAAAATAAATAATAAAAAGGATATTTTTGTAAGTGATTGTTTGAATTATTAAAATGGAAAGGGTTAAAAATTATTTGTGGTCATTGAACTTTAGAGTAATAATTTAATCCATATACTTTGGTTCGTAACATTTTAGTTATTACTTCAAATATTATAAAAATTTAATCTTTATCATGAATAATTTCATCAAAATAAATGTCAATTTTCAGCATGTGATAATATGATTTTTTTAGTTTATAAATATATGTGGTCCTTAATCAATTATATCAACGATAAATCTTATTAAATCTTATCAATATTTTCATATAAAATATTATAACATTAAAAGTATGATGACTAAATTGTTACCACTCTAAATACTATTTTGTAATATATATTATATATATATGTCCAAATAATTTCCTACTTTAATTAACATAACAGACCGACTGGGAAAACACATAAGAATACAAAAATAAATACAAAAGTCAACGAAATAATTCAGAATCCCAAAAAAAAATGCAAGCACACGAAGAAGAAAAAAATTGTGATATTATATTTATTTGCTTCTTTTTTCCCTTTTTGGAGGATGATTTTCTTGTTTTTATAAATAAAAAATTGCAAAAATTAACAATCACTAAATAATCATATTAAAAAATTAATAATAAACTATAAAGGAAGGATGTAAAAGATCATAATTAAGGAAAATGAAATTAGACAGAAAAGTAGAAAAAGAAAATTGAGTATTATATGGGCAAAAGCCAAAGAGTAAAAGGTAAAAAAAAAAAATTAAGTGGGAAACCGTTGTTGAAGGTAACGGTGCCGCTTAATTGCTTTACTTTTTCGCGGCGATTGAGGGAGGCGCCAAATTGGTGGGCCATACCGACCGAACAAAACTACTTTAGTTTTCAACCCTTTCACATTTATAGTTTATTCAAAACTACTTTATCCTTTCATCCATCATGTGTTGTCCCTATTCATCTAGGTAATATAATCATTGTTAAAATATCTTTTTTTTAGTTCATATATTTTGGAATTTTTTTCAATTTTAGTCATGTAGTTACGAGCGTCCAATTTTAGTGTATATGTAATTCGTTAAATCTTAAATTTAGTCATTTAGGAGGCGTTTAGTTGTTGTGAAAAAAAGTGAATTGAGTTGAGTTTAGTTAGTAATTATTATAGGTAGAAAGTAATTGGGGGAGTTGACACAAATAACAAAGTGAGAAATGTAAGTTAATGCGAATATAAACCTCTTTAATTATTGGTGAACCAAACTGTGGGTGGGTTTTTTTTACCCACCCAACCCAATTCAACTTGGGTGTCTAGGGGTGTTTGGCCTACCGACTTCATAAGTCGGTGTTAACTAACTCAACTCCACTTACTTCAATAGTGTTCACTATTGAAATTTGCACATTTATTGAGAAATTTTATCTTTTTCTCTTTTGTACATTTATCGATGAACTTTATTGCTTGTAAGTTAAATAATTAAAATTGACATTTTCAAACAACAAACATCAAAGTTGAATAAAATGGTTTAAATAACATGTTAATCAATATATAACATGTTTTTCTCTTTTTGGGTTATAGATTTATTACTCTTGGAAGAATATTTCCAAAGATAAACAAATTATGTCATTATCTACTACTCTTGAATGTTAAATGCTTGATGCATATCATGTATTATCTCTAGCAATCACAATTCATACTTACATATCGTTCTTTCGACGATGCATGCTAATCCTAATTGAAAAGCGACTATATAAGAAATTCGATATGAGCTCTTACTAACGAGTAACGAGTTTGTAGCGAAATATTGTTATTTTAAGGACGAAGAAGAAACTGAAAATGATCGATGTATGACAGGTGTCGGTCGATTGCTCAATAGTGATAAGTCCAAGGAATCAATCTTTGACTTCCAAGCAATGTGGATTTGATGGGTTCAGTTTATGATTTTTTGCCCCCACTTTTTTTTTTTTATATTCTAACATAGTTTCTTCTCTTCCTCACTCTCTATCTCTGCTATTTTATACTCAAAAGAGATTGGAATAATGATGAGGGAG

mRNA sequence

GCCATACACAGTGTCTCTCTCTACTCTCTACAAACAAAAAAAGAAGCAAAGGATTCACTGAAACAAGAAATCAAAGACAACCATGGAGGAAATGACGTCACGACCTCATGTCATGAACTCTCGCAACACGCAACGTCCTCTTCCACCGCCACCGTCAAGAACACCCGACAACAACAATCACCGTCCTCTTCCGCCTCCACCTTCAAGAGCTCCGCTCAATGTTCACAACACTCACCGTTCTCCTTCATTGCCACCGTCCAGGCCTAATTCCGACTCTCACAACACTCGCTATCCATCTCCGCCGTCGCCGCCTACCTCTCGTCGCCAACATTTTGGTTACGGCACGGCATCATCCTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGCTGCTGCTGCCTCTGCCTCCTCTTCTTCTTCATCGCTCTCCTCGCTCTCGCTATCGTCCTCGTCATTGTTCTCGCCGTCAAACCTAAAAAGCCTCAATTCGATCTCCAGCGAGTCGGCGTTCAATACATGGGGATAACCGCTCCAAATCTCTTCTCATTGTCTTCCTCTGACGCCGAGACCGCTGCGACAACGGCGACGTCCACCTCCGCATCGTTATCGCTTAACATTCGATTGCTGTTCACGGCGGTGAATCCTAACAAAGTCGGAATAAAGTACGGGAATTCGAGGTTCACAGTGATGTACCGAGGGATTCCGTTAGGGAAAGCGATAGTTCCTGGATTTTACCAAGAGGCACACAGTCAGAGAGAGGTGGAGGCGACGATCGCGGTGGATCGAGTGAATTTGCTTCAGGCGGACGCCGCCGATCTCATCAGAGACGCTTCGTTGAACGATCGAGTAGAACTGAGGGTTTTGGGGGAAGTTGGCGCCAGGATCCGCGTCTTGGATTTTGATTCGCCCGGCGTTCAGGTGTCGGTCGATTGCTCAATAGTGATAAGTCCAAGGAATCAATCTTTGACTTCCAAGCAATGTGGATTTGATGGGTTCAGTTTATGATTTTTTGCCCCCACTTTTTTTTTTTTATATTCTAACATAGTTTCTTCTCTTCCTCACTCTCTATCTCTGCTATTTTATACTCAAAAGAGATTGGAATAATGATGAGGGAG

Coding sequence (CDS)

ATGGAGGAAATGACGTCACGACCTCATGTCATGAACTCTCGCAACACGCAACGTCCTCTTCCACCGCCACCGTCAAGAACACCCGACAACAACAATCACCGTCCTCTTCCGCCTCCACCTTCAAGAGCTCCGCTCAATGTTCACAACACTCACCGTTCTCCTTCATTGCCACCGTCCAGGCCTAATTCCGACTCTCACAACACTCGCTATCCATCTCCGCCGTCGCCGCCTACCTCTCGTCGCCAACATTTTGGTTACGGCACGGCATCATCCTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGCTGCTGCTGCCTCTGCCTCCTCTTCTTCTTCATCGCTCTCCTCGCTCTCGCTATCGTCCTCGTCATTGTTCTCGCCGTCAAACCTAAAAAGCCTCAATTCGATCTCCAGCGAGTCGGCGTTCAATACATGGGGATAACCGCTCCAAATCTCTTCTCATTGTCTTCCTCTGACGCCGAGACCGCTGCGACAACGGCGACGTCCACCTCCGCATCGTTATCGCTTAACATTCGATTGCTGTTCACGGCGGTGAATCCTAACAAAGTCGGAATAAAGTACGGGAATTCGAGGTTCACAGTGATGTACCGAGGGATTCCGTTAGGGAAAGCGATAGTTCCTGGATTTTACCAAGAGGCACACAGTCAGAGAGAGGTGGAGGCGACGATCGCGGTGGATCGAGTGAATTTGCTTCAGGCGGACGCCGCCGATCTCATCAGAGACGCTTCGTTGAACGATCGAGTAGAACTGAGGGTTTTGGGGGAAGTTGGCGCCAGGATCCGCGTCTTGGATTTTGATTCGCCCGGCGTTCAGGTGTCGGTCGATTGCTCAATAGTGATAAGTCCAAGGAATCAATCTTTGACTTCCAAGCAATGTGGATTTGATGGGTTCAGTTTATGA

Protein sequence

MEEMTSRPHVMNSRNTQRPLPPPPSRTPDNNNHRPLPPPPSRAPLNVHNTHRSPSLPPSRPNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLFFFIALLALAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL

Homology

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BLAST of Lsi05G002020 vs. TrEMBL
Match: A0A0A0L9B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 5.3e-134
Identity = 268/306 (87.58%), Postives = 279/306 (91.18%), Query Frame = 1


Query: 1   MEEMTSRPHVMNSRNTQRPLPPPPSRTPDNNNHRPLPPPPSRAPLNVHNTHRSPSLPPSR 60
           MEEMTSRP  +N RNTQ PLPPPPSR PDNN+  PLPPPPSRAP N+    RSP  P + 
Sbjct: 1   MEEMTSRPQ-LNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTT 60

Query: 61  PNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLFFFIALLALAI 120
           PNS++ NTRYPSPPSPP+SRRQHFGYG A    SSS S RGCCCCLCLLF FIALLA+AI
Sbjct: 61  PNSNTRNTRYPSPPSPPSSRRQHFGYGAA----SSSPSLRGCCCCLCLLFSFIALLAVAI 120

Query: 121 VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNIRL 180
           VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSD ETAATT+T TSASLSLNIRL
Sbjct: 121 VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTST-TSASLSLNIRL 180

Query: 181 LFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLLQA 240
           LFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEATIAVDRVNLLQA
Sbjct: 181 LFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQA 240

Query: 241 DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG 300
           DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG
Sbjct: 241 DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG 300

Query: 301 FDGFSL 307
           FDGFSL
Sbjct: 301 FDGFSL 300

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BLAST of Lsi05G002020 vs. TrEMBL
Match: A0A061DZ99_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao GN=TCM_006430 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.7e-84
Identity = 187/269 (69.52%), Postives = 210/269 (78.07%), Query Frame = 1


Query: 38  PPPSRAPLNVHNTHRSPSLPPSRPNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSA 97
           PP + +P   H  H     P +  N + H+    +PP  P  +R H  Y     SSSSSA
Sbjct: 2   PPTNMSPN--HQPHAREMRPTA--NGEHHHRGLTAPP--PRPQRHHPYY---PRSSSSSA 61

Query: 98  SFRGCCCCLCLLFFFIALLALAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSS 157
           SF+GCCCCL LLF F+ALL LA+VL+IVLAVKPKKPQFDLQ+VGVQYMGI+  N    S+
Sbjct: 62  SFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVGVQYMGISTSNP---SA 121

Query: 158 SDAETAATTATSTSASLSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFY 217
            D   AA T T T+ASLSL I +LFTAVNPNKVGIKYG SRFTVMYRGIPLGKA VPGF+
Sbjct: 122 FDGAAAAVTTTPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKAAVPGFF 181

Query: 218 QEAHSQREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGV 277
           QEAHS R VEATIAVDR NL+QADAADLIRDASLNDRVELRVLG+VGA+IRVLDFDSPGV
Sbjct: 182 QEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGDVGAKIRVLDFDSPGV 241

Query: 278 QVSVDCSIVISPRNQSLTSKQCGFDGFSL 307
           QVS+DC+IVISPR QSLT KQCGFDG S+
Sbjct: 242 QVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

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BLAST of Lsi05G002020 vs. TrEMBL
Match: M5Y567_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84
Identity = 189/291 (64.95%), Postives = 216/291 (74.23%), Query Frame = 1


Query: 16  TQRPLPPPPSRTPDNNNHRPLPPPPSRAPLNVHNTHRSPSLPPSRPNSDSHNTRYPSPPS 75
           T R  P P      N  HRP  PPP   P +            S P++ +H+  YP    
Sbjct: 2   TSRANPNPTPNGTANGEHRPRGPPPRPPPSS------------SNPHNSNHHPYYP---- 61

Query: 76  PPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLFFFIALLALAIVLVIVLAVKPKKPQF 135
                       T SSSSSSSASF+GCCCCL LLF F+ALL LA+VLVI+LAVKPKKPQF
Sbjct: 62  ------------TTSSSSSSSASFKGCCCCLFLLFSFLALLVLAVVLVIILAVKPKKPQF 121

Query: 136 DLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNIRLLFTAVNPNKVGIKYG 195
           DLQ+VGVQYMGI +PN    + + A TA      TSASLSL+IR+LF+AVNPNKVGI+YG
Sbjct: 122 DLQQVGVQYMGINSPNP---TPAAAATADPNQNPTSASLSLSIRMLFSAVNPNKVGIRYG 181

Query: 196 NSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLLQADAADLIRDASLNDRV 255
            SRFTVMYRGIPLGKA VPGF+Q+AH+ R+V ATI+VDRVNLLQADAADLIRDASLNDRV
Sbjct: 182 ESRFTVMYRGIPLGKASVPGFFQDAHTVRQVVATISVDRVNLLQADAADLIRDASLNDRV 241

Query: 256 ELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 307
           ELRVLG+VGA+IRVL+FDSPGVQVSVDC+IVISPR QSLT KQCGFDG S+
Sbjct: 242 ELRVLGDVGAKIRVLNFDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 261

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BLAST of Lsi05G002020 vs. TrEMBL
Match: A0A067EH55_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023930mg PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.1e-83
Identity = 183/262 (69.85%), Postives = 207/262 (79.01%), Query Frame = 1


Query: 54  PSLPP-SRPNSDSHNTRYPSPPSPPTSRRQ--------HFGYGTASSSSSSSASFRGCCC 113
           P +PP ++PN   H+ R P PP PP  + Q        H  Y   ++SSSSSASFRGCCC
Sbjct: 20  PKMPPQTQPNGTHHHQRRPHPPPPPPLQPQSQYHHHHDHHQY-YPTTSSSSSASFRGCCC 79

Query: 114 CLCLLFFFIALLALAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAA 173
           CL LLF FIALL LA+VL++ LAVKPKKPQFDLQ+VGVQYMGI+ PN    SS D    +
Sbjct: 80  CLFLLFSFIALLILAVVLIVFLAVKPKKPQFDLQQVGVQYMGISTPN--PTSSVDP---S 139

Query: 174 TTATSTSASLSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQR 233
           TT  +TSASLSL I LLFTA NPNKVGIKYG S+FTVMYRGIPLGKA VPGFYQ AHS R
Sbjct: 140 TTIAATSASLSLTIHLLFTAANPNKVGIKYGESKFTVMYRGIPLGKASVPGFYQGAHSVR 199

Query: 234 EVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCS 293
            VEATIAVDR NL+QADAA LI+DASLNDRVELRVLG+V A+IRV++FDSPGVQVSVDC+
Sbjct: 200 NVEATIAVDRANLMQADAASLIKDASLNDRVELRVLGDVSAKIRVMNFDSPGVQVSVDCA 259

Query: 294 IVISPRNQSLTSKQCGFDGFSL 307
           IVISPR QSLT KQCGFDG ++
Sbjct: 260 IVISPRKQSLTYKQCGFDGLTV 275

[Close]

BLAST of Lsi05G002020 vs. TrEMBL
Match: F6H1R4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00370 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.5e-83
Identity = 175/248 (70.56%), Postives = 197/248 (79.44%), Query Frame = 1


Query: 59  SRPNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLFFFIALLAL 118
           SR N +  +   P P        QH  +  + S S SSASF+GCCCCL LLF F+ALL L
Sbjct: 3   SRANVNGEHNLRPPPNHHHHPHSQHHSHYQSPSYSPSSASFKGCCCCLFLLFSFLALLVL 62

Query: 119 AIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNI 178
           A+VL+IVLAVKPKKPQFDLQ+VGVQYMGITA       +  +  A +  T TSASLSLNI
Sbjct: 63  AVVLIIVLAVKPKKPQFDLQQVGVQYMGITA-------NPSSTVAGSPPTPTSASLSLNI 122

Query: 179 RLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLL 238
           ++LFTAVNPNKVGIKYG SRFTVMYRGIPLGK +VPGFYQ AHS R+VE T+AVDR NLL
Sbjct: 123 KMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKGVVPGFYQPAHSVRQVETTVAVDRANLL 182

Query: 239 QADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQ 298
           QADAADLI+DASLNDRVELR+LGEVGA+IRVLDF SPGVQVSVDC+IVISPR QSLT KQ
Sbjct: 183 QADAADLIKDASLNDRVELRILGEVGAKIRVLDFTSPGVQVSVDCAIVISPRKQSLTYKQ 242

Query: 299 CGFDGFSL 307
           CGFDG S+
Sbjct: 243 CGFDGLSV 243

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BLAST of Lsi05G002020 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 278.9 bits (712), Expect = 3.8e-75
Identity = 156/243 (64.20%), Postives = 184/243 (75.72%), Query Frame = 1


Query: 73  PPSPPTSRRQHFGYGTA---------SSSSSSSASFRGCCCCLCLLFFFIALLALAIVLV 132
           PP P +SR    G   A         S SSSSSAS +GCCCCL LLF F+ALL LA+VL+
Sbjct: 2   PPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLI 61

Query: 133 IVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNIRLLFT 192
           ++LAVKPKKPQFDLQ+V V YMGI+ P+                  T+ASLSL IR+LFT
Sbjct: 62  VILAVKPKKPQFDLQQVAVVYMGISNPS-------------AVLDPTTASLSLTIRMLFT 121

Query: 193 AVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLLQADAA 252
           AVNPNKVGI+YG S FTVMY+G+PLG+A VPGFYQ+AHS + VEATI+VDRVNL+QA AA
Sbjct: 122 AVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAA 181

Query: 253 DLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDG 307
           DL+RDASLNDRVEL V G+VGA+IRV++FDSPGVQVSV+C I ISPR Q+L  KQCGFDG
Sbjct: 182 DLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFDG 231

[Close]

BLAST of Lsi05G002020 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 51.6 bits (122), Expect = 9.9e-07
Identity = 59/246 (23.98%), Postives = 100/246 (40.65%), Query Frame = 1


Query: 56  LPPSRPNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLFFFIAL 115
           LPP +PN+ S  T+  +  +    RR+                 R C  C+C     I L
Sbjct: 22  LPPPKPNASSMETQSANTGTAKKLRRK-----------------RNCKICICFTILLILL 81

Query: 116 LALAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLS 175
           +A+ IV++     KPK+P   +  V V                D   A+         L+
Sbjct: 82  IAIVIVILAFTLFKPKRPTTTIDSVTV----------------DRLQASVNPLLLKVLLN 141

Query: 176 LNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRV 235
           L + +  +  NPN++G  Y +S   + YRG  +G+A +P     A     +  T+ +   
Sbjct: 142 LTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMAD 201

Query: 236 NLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLT 295
            LL      L+ D  +   + L    +V  ++ VL      VQ S  C + IS  ++++T
Sbjct: 202 RLL--SETQLLSDV-MAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVT 231

Query: 296 SKQCGF 302
           S+ C +
Sbjct: 262 SQHCKY 231

[Close]

BLAST of Lsi05G002020 vs. NCBI nr
Match: gi|659112197|ref|XP_008456109.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo])

HSP 1 Score: 491.9 bits (1265), Expect = 8.2e-136
Identity = 269/306 (87.91%), Postives = 283/306 (92.48%), Query Frame = 1


Query: 1   MEEMTSRPHVMNSRNTQRPLPPPPSRTPDNNNHRPLPPPPSRAPLNVHNTHRSPSLPPSR 60
           MEEMTSRP  +N R+TQ PLPPPPSR P NN+HRPLPPPPSRAP N+H+  RSP  P + 
Sbjct: 1   MEEMTSRPQ-LNPRSTQPPLPPPPSRRPHNNHHRPLPPPPSRAPFNLHSNPRSPPFPSTA 60

Query: 61  PNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLFFFIALLALAI 120
           PN ++ NTRYPSPPSPP+SRRQHFGYG A    SSS SFRGCCCCLCLLF FIALLA+AI
Sbjct: 61  PNPNTRNTRYPSPPSPPSSRRQHFGYGAA----SSSPSFRGCCCCLCLLFSFIALLAIAI 120

Query: 121 VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNIRL 180
           +LVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATT+T TSASLSLNIRL
Sbjct: 121 ILVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTST-TSASLSLNIRL 180

Query: 181 LFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLLQA 240
           LFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEATIAVDRVNLLQA
Sbjct: 181 LFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQA 240

Query: 241 DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG 300
           DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG
Sbjct: 241 DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG 300

Query: 301 FDGFSL 307
           FDGFSL
Sbjct: 301 FDGFSL 300

[Close]

BLAST of Lsi05G002020 vs. NCBI nr
Match: gi|449446081|ref|XP_004140800.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 7.6e-134
Identity = 268/306 (87.58%), Postives = 279/306 (91.18%), Query Frame = 1


Query: 1   MEEMTSRPHVMNSRNTQRPLPPPPSRTPDNNNHRPLPPPPSRAPLNVHNTHRSPSLPPSR 60
           MEEMTSRP  +N RNTQ PLPPPPSR PDNN+  PLPPPPSRAP N+    RSP  P + 
Sbjct: 1   MEEMTSRPQ-LNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTT 60

Query: 61  PNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLFFFIALLALAI 120
           PNS++ NTRYPSPPSPP+SRRQHFGYG A    SSS S RGCCCCLCLLF FIALLA+AI
Sbjct: 61  PNSNTRNTRYPSPPSPPSSRRQHFGYGAA----SSSPSLRGCCCCLCLLFSFIALLAVAI 120

Query: 121 VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNIRL 180
           VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSD ETAATT+T TSASLSLNIRL
Sbjct: 121 VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTST-TSASLSLNIRL 180

Query: 181 LFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLLQA 240
           LFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEATIAVDRVNLLQA
Sbjct: 181 LFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQA 240

Query: 241 DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG 300
           DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG
Sbjct: 241 DAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCG 300

Query: 301 FDGFSL 307
           FDGFSL
Sbjct: 301 FDGFSL 300

[Close]

BLAST of Lsi05G002020 vs. NCBI nr
Match: gi|645223834|ref|XP_008218823.1| (PREDICTED: uncharacterized protein LOC103319102 [Prunus mume])

HSP 1 Score: 324.3 bits (830), Expect = 2.3e-85
Identity = 183/259 (70.66%), Postives = 210/259 (81.08%), Query Frame = 1


Query: 53  SPSLPPSRPNSDSHNTRYPSPPSPPTSRRQHFG-----YGTASSSSSSSASFRGCCCCLC 112
           +P+  P+   +  H  R P P  PP+S   H       Y T SSSSS+SASF+GCCCCL 
Sbjct: 6   NPNPTPNGTANGEHRQRGPPPRPPPSSSNPHNSNHHPYYPTTSSSSSNSASFKGCCCCLF 65

Query: 113 LLFFFIALLALAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTA 172
           LLF F+ALL LA+VLVIVLAVKPKKPQFDLQ+VGVQYMGI +PN    + + A TA    
Sbjct: 66  LLFSFLALLVLAVVLVIVLAVKPKKPQFDLQQVGVQYMGINSPNP---TPAAAATADPNQ 125

Query: 173 TSTSASLSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVE 232
             TSASLSL+IR+LF+AVNPNKVGI+YG SRFTVMYRGIPLGKA VPGF+Q+AH+ R+V 
Sbjct: 126 NPTSASLSLSIRMLFSAVNPNKVGIRYGESRFTVMYRGIPLGKASVPGFFQDAHTVRQVV 185

Query: 233 ATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVI 292
           ATI+VDRVNLLQADAADLIRDASLNDRVELRVLG+VGA+IRVL+FDSPGVQVSVDC+IVI
Sbjct: 186 ATISVDRVNLLQADAADLIRDASLNDRVELRVLGDVGAKIRVLNFDSPGVQVSVDCAIVI 245

Query: 293 SPRNQSLTSKQCGFDGFSL 307
           SPR QSLT KQCGFDG S+
Sbjct: 246 SPRKQSLTYKQCGFDGLSV 261

[Close]

BLAST of Lsi05G002020 vs. NCBI nr
Match: gi|658058956|ref|XP_008365290.1| (PREDICTED: uncharacterized protein LOC103428932 [Malus domestica])

HSP 1 Score: 323.2 bits (827), Expect = 5.0e-85
Identity = 181/247 (73.28%), Postives = 200/247 (80.97%), Query Frame = 1


Query: 66  HNTRYPSPPS-----PPTSRRQHFGYGTASS-SSSSSASFRGCCCCLCLLFFFIALLALA 125
           H  R P PPS     P +S   H  Y T SS SSSSSASF+GCCCCL LLF F+ALL LA
Sbjct: 19  HRXRVPPPPSSSSSNPHSSSNHHRYYPTRSSYSSSSSASFKGCCCCLFLLFSFLALLVLA 78

Query: 126 IVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATSTSASLSLNIR 185
           +VLVI+LAVKPKKPQFDLQ+VGVQYMGI +PN          TA      TSASLSLNIR
Sbjct: 79  VVLVIILAVKPKKPQFDLQQVGVQYMGINSPN-------PTATADPNQNPTSASLSLNIR 138

Query: 186 LLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEATIAVDRVNLLQ 245
           +LF+A NPNKV IKYG SRFTVMYRGIPLGKA +PGFYQ+AH+ R+V ATIAVDRVNLLQ
Sbjct: 139 MLFSAANPNKVXIKYGESRFTVMYRGIPLGKASIPGFYQDAHTVRQVVATIAVDRVNLLQ 198

Query: 246 ADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQC 305
           ADAADL+RDASLNDRVELRVLG+VGA+IRVL+FDSPGVQVSVDC+IVISPR QSLT KQC
Sbjct: 199 ADAADLVRDASLNDRVELRVLGDVGAKIRVLNFDSPGVQVSVDCAIVISPRKQSLTYKQC 258

Query: 306 GFDGFSL 307
           GFDG S+
Sbjct: 259 GFDGLSV 258

[Close]

BLAST of Lsi05G002020 vs. NCBI nr
Match: gi|590683364|ref|XP_007041580.1| (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [Theobroma cacao])

HSP 1 Score: 320.9 bits (821), Expect = 2.5e-84
Identity = 187/269 (69.52%), Postives = 210/269 (78.07%), Query Frame = 1


Query: 38  PPPSRAPLNVHNTHRSPSLPPSRPNSDSHNTRYPSPPSPPTSRRQHFGYGTASSSSSSSA 97
           PP + +P   H  H     P +  N + H+    +PP  P  +R H  Y     SSSSSA
Sbjct: 2   PPTNMSPN--HQPHAREMRPTA--NGEHHHRGLTAPP--PRPQRHHPYY---PRSSSSSA 61

Query: 98  SFRGCCCCLCLLFFFIALLALAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSS 157
           SF+GCCCCL LLF F+ALL LA+VL+IVLAVKPKKPQFDLQ+VGVQYMGI+  N    S+
Sbjct: 62  SFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVGVQYMGISTSNP---SA 121

Query: 158 SDAETAATTATSTSASLSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFY 217
            D   AA T T T+ASLSL I +LFTAVNPNKVGIKYG SRFTVMYRGIPLGKA VPGF+
Sbjct: 122 FDGAAAAVTTTPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKAAVPGFF 181

Query: 218 QEAHSQREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGV 277
           QEAHS R VEATIAVDR NL+QADAADLIRDASLNDRVELRVLG+VGA+IRVLDFDSPGV
Sbjct: 182 QEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGDVGAKIRVLDFDSPGV 241

Query: 278 QVSVDCSIVISPRNQSLTSKQCGFDGFSL 307
           QVS+DC+IVISPR QSLT KQCGFDG S+
Sbjct: 242 QVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

The following BLAST results are available for this feature:

BLAST of Lsi05G002020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G002020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9B0_CUCSA	5.3e-134	87.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1	[more]
A0A061DZ99_THECC	1.7e-84	69.52	Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS...	[more]
M5Y567_PRUPE	2.3e-84	64.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1	[more]
A0A067EH55_CITSI	1.1e-83	69.85	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023930mg PE=4 SV=1	[more]
F6H1R4_VITVI	2.5e-83	70.56	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00370 PE=4 SV=...	[more]

BLAST of Lsi05G002020 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01080.1	3.8e-75	64.20	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT3G54200.1	9.9e-07	23.98	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Lsi05G002020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112197\|ref\|XP_008456109.1\|	8.2e-136	87.91	PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo]	[more]
gi\|449446081\|ref\|XP_004140800.1\|	7.6e-134	87.58	PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus]	[more]
gi\|645223834\|ref\|XP_008218823.1\|	2.3e-85	70.66	PREDICTED: uncharacterized protein LOC103319102 [Prunus mume]	[more]
gi\|658058956\|ref\|XP_008365290.1\|	5.0e-85	73.28	PREDICTED: uncharacterized protein LOC103428932 [Malus domestica]	[more]
gi\|590683364\|ref\|XP_007041580.1\|	2.5e-84	69.52	Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [T...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002020.1	Lsi05G002020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 184..283 score: 7.8
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 32..304 score: 3.6E
None	No IPR available	PANTHER	PTHR31234:SF8	EXPRESSED PROTEIN	coord: 32..304 score: 3.6E
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 175..263 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002020	Csa3G209460	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002020	CSPI03G18650	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002020	Cucsa.244220	Cucumber (Gy14) v1	cgylsiB404
Lsi05G002020	CmaCh04G005020	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G002020	CmoCh04G005410	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G002020	Cla013056	Watermelon (97103) v1	lsiwmB361
Lsi05G002020	MELO3C019499	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002020	ClCG05G009890	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002020	MELO3C031692.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002020	Cla97C05G092300	Watermelon (97103) v2	lsiwmbB329
Lsi05G002020	Bhi01G001245	Wax gourd	lsiwgoB431
Lsi05G002020	Cp4.1LG01g02100	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G002020	CsGy3G018490	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002020	Carg08172	Silver-seed gourd	carlsiB346
Lsi05G002020	CsaV3_3G018700	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002020	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G002020	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G002020	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G002020	Silver-seed gourd	carlsiB595