CmoCh04G005410 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G005410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Expressed protein) (Late embryogenesis abundant hydroxyproline-rich glycoprotein)
Location	Cmo_Chr04 : 2685040 .. 2687940 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCCAGAGCTCCCTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCAGCAACATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGCTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCTGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGGGTGAATCTACTTCAGGCGGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTCAGTTCCTTTTTCTTCCCATTTCTCGTCTTCTTTTGCACGCATTTTCCTCCCGCTTCCCTTTTTTTTTTTTTTAGCTTTAAAATTATAATTTTAACATTTAGTCTATCAAATTTGTGCTTCCTATTTATTTAATTTATTTATTTTTAACAAAAGTATATTTTATATTTAATGATCCATAAATTAGTGGATTAAAAAAACAAAAGTTAAAAGGCTAAATTACATAAATTAAATTAAACTGGTAAGGAGAGTTTATAATTAAACTTCTGAATATTTTAATAGAAAAAATAAATGTGAGTTAGGAAGCCGCGCTAATAATAGTAGGGGGCAGTGTGTTTTAAGGATTTATTATTATTTATAAAAAAGCTTCAATTTATTAGTTTAATACTTTGAATTATCCATATAGAAATTTATTATTTTAAAAAAGAAAAACATCCAACTTTTAATTAGCATAATAGACAAAATAAAAGAATAAAAACAGAAGTACAAAAGGCTATGCCTCAATTAGCTAATCAAAATAATTCTCAATCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAGAATAATTGTGATTTTTTCTTTTAAATTCAACAATTGTTATTGTTGTTTTTTTAAATATATATATATATGTTTATATTTATTAATCATATTTACATTTTGTTTTTCTTCCGTAAAAAAAATTATTATTATTTGAAAAGAATAAAATTAAAATAAAAAAAGTATTAAAAAGTCAAAGTGATAAAACATTGGGAAACCGCTGCCGAAGAAAACGGTGCCGCTTAGTTGCTTTACGACAAAATGGTGGGGGCCACACCGACCGAATAAAACTGCGTTGTTTTTTCAACCCTTTCACATTTGGGAGTTTTTTTTTAATTATTTATTTAACCTATTTACTCATCATGTCTTGTCCCTATTTATTTACCTAATATAATAATAATAATATCATCTTTTTTACATACCCATTGTGTTTAATTAGTTTGATTCAAATTCTCGTACTCCTTTTTAAATATAAGTATATTCCCATTTTACCATTGAATCGGGTCGAGGAATAATGAATATTTTTTCTTAAAGAAAATGTCAAGCTCAAGTCCTGGCCATTACTCAATTTATGTTGTTGCATGATCAAGTTTTATCGTGTTAAGTTCATTATGTTCTTGTGATTCTGTACGAGTTTTTGTTTATGGTTGTGTAGTCAAATATTTTGAATGACGACAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGATTGTTCTTACTTATTTTCTTCACTCTCTATCTCTGGTCTTTTAATGTCAACAGAGATGGAATGAATGATTTTGAGAGGAAGAAGAAAAATGTACACAAAAAAAAGAAAGAAAAAGTAAGAAGTAAGCAACATCACATGCAAAGGAGTCCTTCAAAAGCAATGCCTTTTGATTCCCAAATTTTAAAACAAAAAGAATTGGGAGAATCTCAAACCTTTATTCTTTTATATTTTGGCAACTTTGTTATCGGATTCAAATTATAAATCTTGTCTACTAGTTCGTGATTTGATTGAGTTGATTTAGAACAATTGGATTGTCTTGTTTCGTTGTGTGAGATTCCACATCGGTTGGAGAGAACGAGAGTGAAGCATTCATTTCAAGGATGTGGAAAACTCTCCCTACTAGACGAATTTTAAAACCATGAGGTTGATGGCAATACGCAACGGGTCAAAGAGGACAATATTTATTAATAGTGGGTGTAGTGTAATGTATCAGTGATGACACTGGGGCCACCAATGGAGTGGATAGTGAGATCCCCCATCGGTTGGAGAGGAGAACGAAACATTCCATATAAGGGTGTGGAAACCTCTTTCAAATAGACGCGTTTCAAAACCGTAAGATTAACGACGATACGTAACGGGCTAAAACATACAATATTTACTAATGGTAGTATCATAATCAGACATCGA

mRNA sequence

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCCAGAGCTCCCTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCAGCAACATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGCTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCTGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGGGTGAATCTACTTCAGGCGGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGATTGTTCTTACTTATTTTCTTCACTCTCTATCTCTGGTCTTTTAATGTCAACAGAGATGGAATGAATGATTTTGAGAGGAAGAAGAAAAATGTACACAAAAAAAAGAAAGAAAAAGTAAGAAGTAAGCAACATCACATGCAAAGGAGTCCTTCAAAAGCAATGCCTTTTGATTCCCAAATTTTAAAACAAAAAGAATTGGGAGAATCTCAAACCTTTATTCTTTTATATTTTGGCAACTTTGTTATCGGATTCAAATTATAAATCTTGTCTACTAGTTCGTGATTTGATTGAGTTGATTTAGAACAATTGGATTGTCTTGTTTCGTTGTGTGAGATTCCACATCGGTTGGAGAGAACGAGAGTGAAGCATTCATTTCAAGGATGTGGAAAACTCTCCCTACTAGACGAATTTTAAAACCATGAGGTTGATGGCAATACGCAACGGGTCAAAGAGGACAATATTTATTAATAGTGGGTGTAGTGTAATGTATCAGTGATGACACTGGGGCCACCAATGGAGTGGATAGTGAGATCCCCCATCGGTTGGAGAGGAGAACGAAACATTCCATATAAGGGTGTGGAAACCTCTTTCAAATAGACGCGTTTCAAAACCGTAAGATTAACGACGATACGTAACGGGCTAAAACATACAATATTTACTAATGGTAGTATCATAATCAGACATCGA

Coding sequence (CDS)

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCCAGAGCTCCCTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCAGCAACATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGCTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCTGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGGGTGAATCTACTTCAGGCGGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

Homology

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BLAST of CmoCh04G005410 vs. TrEMBL
Match: A0A0A0L9B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.0e-124
Identity = 253/313 (80.83%), Postives = 275/313 (87.86%), Query Frame = 1


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP +N RN   Q PLPPPPSR    P NN+  PLPPPPSRAPFN+Q +    P 
Sbjct: 1   MEEMTSRPQLNPRNT--QPPLPPPPSR---RPDNNHRPPLPPPPSRAPFNLQTNPRSPPF 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PS   + PNS+++N R+PSPPS PP SR+QHFGY   ++SSS S RGCCCCLCLLFSFIA
Sbjct: 61  PS---TTPNSNTRNTRYPSPPS-PPSSRRQHFGYG--AASSSPSLRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLA+AIVLV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T  T +  TTSA+
Sbjct: 121 LLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTS--TTSAS 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 300

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BLAST of CmoCh04G005410 vs. TrEMBL
Match: A0A067EH55_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023930mg PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 6.5e-87
Identity = 188/265 (70.94%), Postives = 205/265 (77.36%), Query Frame = 1


Query: 58  SPLPSMPP-SRPNSDSQNARFPSPPSSPPLSRQQ--------HFGYDTTSSSSSASFRGC 117
           S  P MPP ++PN    + R P PP  PPL  Q         H  Y TTSSSSSASFRGC
Sbjct: 17  SSQPKMPPQTQPNGTHHHQRRPHPPPPPPLQPQSQYHHHHDHHQYYPTTSSSSSASFRGC 76

Query: 118 CCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQT 177
           CCCL LLFSFIALL LA+VL+V LAVKPKKPQFDLQ+VGVQYMGI+TPN    SS D  T
Sbjct: 77  CCCLFLLFSFIALLILAVVLIVFLAVKPKKPQFDLQQVGVQYMGISTPN--PTSSVDPST 136

Query: 178 VTTPTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAH 237
               T   TSA+LSL I LLFTA NPNKVGIKYG S+FTVMYRGIPLGKA VPGFYQ AH
Sbjct: 137 ----TIAATSASLSLTIHLLFTAANPNKVGIKYGESKFTVMYRGIPLGKASVPGFYQGAH 196

Query: 238 SQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSV 297
           S R VEA IAVDR NL+QADAA LI+DASLNDRVELRVLG+V A+IRV+ FDSPGVQVSV
Sbjct: 197 SVRNVEATIAVDRANLMQADAASLIKDASLNDRVELRVLGDVSAKIRVMNFDSPGVQVSV 256

Query: 298 DCSIVISPRNQSLTSKQCGFDGFSL 314
           DC+IVISPR QSLT KQCGFDG ++
Sbjct: 257 DCAIVISPRKQSLTYKQCGFDGLTV 275

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BLAST of CmoCh04G005410 vs. TrEMBL
Match: A0A061DZ99_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao GN=TCM_006430 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 9.4e-86
Identity = 181/272 (66.54%), Postives = 208/272 (76.47%), Query Frame = 1


Query: 42  PPPSRAPFNVQHDTHRSPLPSMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSS 101
           PP + +P +  H     P         N +  +    +PP  P    Q+H  Y   SSSS
Sbjct: 2   PPTNMSPNHQPHAREMRPTA-------NGEHHHRGLTAPPPRP----QRHHPYYPRSSSS 61

Query: 102 SASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSL 161
           SASF+GCCCCL LLFSF+ALL LA+VL++VLAVKPKKPQFDLQ+VGVQYMGI+T N  + 
Sbjct: 62  SASFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVGVQYMGISTSNPSAF 121

Query: 162 SSADSQTVTTPTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVP 221
             A +   TTPT    +A+LSL I +LFTAVNPNKVGIKYG SRFTVMYRGIPLGKA VP
Sbjct: 122 DGAAAAVTTTPT----TASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKAAVP 181

Query: 222 GFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDS 281
           GF+QEAHS R VEA IAVDR NL+QADAADLIRDASLNDRVELRVLG+VGA+IRVL+FDS
Sbjct: 182 GFFQEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGDVGAKIRVLDFDS 241

Query: 282 PGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           PGVQVS+DC+IVISPR QSLT KQCGFDG S+
Sbjct: 242 PGVQVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

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BLAST of CmoCh04G005410 vs. TrEMBL
Match: M5Y567_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.5e-83
Identity = 191/312 (61.22%), Postives = 218/312 (69.87%), Query Frame = 1


Query: 4   MTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPLPSM 63
           MTSR N N           P P+    G +N  HRP  PPP                   
Sbjct: 1   MTSRANPN-----------PTPN----GTANGEHRPRGPPPR------------------ 60

Query: 64  PPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSSS--ASFRGCCCCLCLLFSFIAL 123
                         P P SS P +   H  Y TTSSSSS  ASF+GCCCCL LLFSF+AL
Sbjct: 61  --------------PPPSSSNPHNSNHHPYYPTTSSSSSSSASFKGCCCCLFLLFSFLAL 120

Query: 124 LALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAAL 183
           L LA+VLV++LAVKPKKPQFDLQ+VGVQYMGI +PN    ++A +     P    TSA+L
Sbjct: 121 LVLAVVLVIILAVKPKKPQFDLQQVGVQYMGINSPNPTPAAAATAD----PNQNPTSASL 180

Query: 184 SLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDR 243
           SL+IR+LF+AVNPNKVGI+YG SRFTVMYRGIPLGKA VPGF+Q+AH+ R+V A I+VDR
Sbjct: 181 SLSIRMLFSAVNPNKVGIRYGESRFTVMYRGIPLGKASVPGFFQDAHTVRQVVATISVDR 240

Query: 244 VNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSL 303
           VNLLQADAADLIRDASLNDRVELRVLG+VGA+IRVL FDSPGVQVSVDC+IVISPR QSL
Sbjct: 241 VNLLQADAADLIRDASLNDRVELRVLGDVGAKIRVLNFDSPGVQVSVDCAIVISPRKQSL 261

Query: 304 TSKQCGFDGFSL 314
           T KQCGFDG S+
Sbjct: 301 TYKQCGFDGLSV 261

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BLAST of CmoCh04G005410 vs. TrEMBL
Match: F6H1R4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00370 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.0e-83
Identity = 175/249 (70.28%), Postives = 198/249 (79.52%), Query Frame = 1


Query: 66  SRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTS-SSSSASFRGCCCCLCLLFSFIALLAL 125
           SR N + ++   P P        Q H  Y + S S SSASF+GCCCCL LLFSF+ALL L
Sbjct: 3   SRANVNGEHNLRPPPNHHHHPHSQHHSHYQSPSYSPSSASFKGCCCCLFLLFSFLALLVL 62

Query: 126 AIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAALSLN 185
           A+VL++VLAVKPKKPQFDLQ+VGVQYMGIT        +  S TV    PT TSA+LSLN
Sbjct: 63  AVVLIIVLAVKPKKPQFDLQQVGVQYMGIT--------ANPSSTVAGSPPTPTSASLSLN 122

Query: 186 IRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNL 245
           I++LFTAVNPNKVGIKYG SRFTVMYRGIPLGK +VPGFYQ AHS R+VE  +AVDR NL
Sbjct: 123 IKMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKGVVPGFYQPAHSVRQVETTVAVDRANL 182

Query: 246 LQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSK 305
           LQADAADLI+DASLNDRVELR+LGEVGA+IRVL+F SPGVQVSVDC+IVISPR QSLT K
Sbjct: 183 LQADAADLIKDASLNDRVELRILGEVGAKIRVLDFTSPGVQVSVDCAIVISPRKQSLTYK 242

Query: 306 QCGFDGFSL 314
           QCGFDG S+
Sbjct: 243 QCGFDGLSV 243

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BLAST of CmoCh04G005410 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 283.1 bits (723), Expect = 2.1e-76
Identity = 157/244 (64.34%), Postives = 187/244 (76.64%), Query Frame = 1


Query: 78  PSPPSS--------PPLSRQQHFGYDTTSSSSSASFRGCCCCLCLLFSFIALLALAIVLV 137
           P PPSS        P  ++ Q   Y + SSSSSAS +GCCCCL LLF+F+ALL LA+VL+
Sbjct: 2   PPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLI 61

Query: 138 VVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAALSLNIRLLF 197
           V+LAVKPKKPQFDLQ+V V YMGI+ P+           V  PT    +A+LSL IR+LF
Sbjct: 62  VILAVKPKKPQFDLQQVAVVYMGISNPS----------AVLDPT----TASLSLTIRMLF 121

Query: 198 TAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADA 257
           TAVNPNKVGI+YG S FTVMY+G+PLG+A VPGFYQ+AHS + VEA I+VDRVNL+QA A
Sbjct: 122 TAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHA 181

Query: 258 ADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFD 314
           ADL+RDASLNDRVEL V G+VGA+IRV+ FDSPGVQVSV+C I ISPR Q+L  KQCGFD
Sbjct: 182 ADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFD 231

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BLAST of CmoCh04G005410 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 56/247 (22.67%), Postives = 100/247 (40.49%), Query Frame = 1


Query: 62  SMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSSSASFRGCCCCLCLLFSFIAL 121
           S+ P     + + A    PP  P  S  +    +T ++      R C  C+C     I L
Sbjct: 5   SIKPDDKKEEEKPATAMLPPPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILL 64

Query: 122 LALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAAL 181
           +A+ IV++     KPK+P   +  V V  +  +                   P      L
Sbjct: 65  IAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASV-----------------NPLLLKVLL 124

Query: 182 SLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDR 241
           +L + +  +  NPN++G  Y +S   + YRG  +G+A +P     A     +   + +  
Sbjct: 125 NLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMA 184

Query: 242 VNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSL 301
             LL      L+ D  +   + L    +V  ++ VL+     VQ S  C + IS  ++++
Sbjct: 185 DRLL--SETQLLSDV-MAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNV 231

Query: 302 TSKQCGF 309
           TS+ C +
Sbjct: 245 TSQHCKY 231

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BLAST of CmoCh04G005410 vs. NCBI nr
Match: gi|659112197|ref|XP_008456109.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo])

HSP 1 Score: 454.9 bits (1169), Expect = 1.1e-124
Identity = 254/313 (81.15%), Postives = 277/313 (88.50%), Query Frame = 1


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP +N R+   Q PLPPPPSR    P NN+HRPLPPPPSRAPFN+ H   RSP 
Sbjct: 1   MEEMTSRPQLNPRST--QPPLPPPPSR---RPHNNHHRPLPPPPSRAPFNL-HSNPRSP- 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
              P + PN +++N R+PSPPS PP SR+QHFGY   ++SSS SFRGCCCCLCLLFSFIA
Sbjct: 61  -PFPSTAPNPNTRNTRYPSPPS-PPSSRRQHFGYG--AASSSPSFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLA+AI+LV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T  T +  TTSA+
Sbjct: 121 LLAIAIILVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTS--TTSAS 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 300

[Close]

BLAST of CmoCh04G005410 vs. NCBI nr
Match: gi|449446081|ref|XP_004140800.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 4.3e-124
Identity = 253/313 (80.83%), Postives = 275/313 (87.86%), Query Frame = 1


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP +N RN   Q PLPPPPSR    P NN+  PLPPPPSRAPFN+Q +    P 
Sbjct: 1   MEEMTSRPQLNPRNT--QPPLPPPPSR---RPDNNHRPPLPPPPSRAPFNLQTNPRSPPF 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PS   + PNS+++N R+PSPPS PP SR+QHFGY   ++SSS S RGCCCCLCLLFSFIA
Sbjct: 61  PS---TTPNSNTRNTRYPSPPS-PPSSRRQHFGYG--AASSSPSLRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLA+AIVLV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T  T +  TTSA+
Sbjct: 121 LLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTS--TTSAS 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 300

[Close]

BLAST of CmoCh04G005410 vs. NCBI nr
Match: gi|641834195|gb|KDO53195.1| (hypothetical protein CISIN_1g023930mg [Citrus sinensis])

HSP 1 Score: 328.9 bits (842), Expect = 9.4e-87
Identity = 188/265 (70.94%), Postives = 205/265 (77.36%), Query Frame = 1


Query: 58  SPLPSMPP-SRPNSDSQNARFPSPPSSPPLSRQQ--------HFGYDTTSSSSSASFRGC 117
           S  P MPP ++PN    + R P PP  PPL  Q         H  Y TTSSSSSASFRGC
Sbjct: 17  SSQPKMPPQTQPNGTHHHQRRPHPPPPPPLQPQSQYHHHHDHHQYYPTTSSSSSASFRGC 76

Query: 118 CCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQT 177
           CCCL LLFSFIALL LA+VL+V LAVKPKKPQFDLQ+VGVQYMGI+TPN    SS D  T
Sbjct: 77  CCCLFLLFSFIALLILAVVLIVFLAVKPKKPQFDLQQVGVQYMGISTPN--PTSSVDPST 136

Query: 178 VTTPTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAH 237
               T   TSA+LSL I LLFTA NPNKVGIKYG S+FTVMYRGIPLGKA VPGFYQ AH
Sbjct: 137 ----TIAATSASLSLTIHLLFTAANPNKVGIKYGESKFTVMYRGIPLGKASVPGFYQGAH 196

Query: 238 SQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSV 297
           S R VEA IAVDR NL+QADAA LI+DASLNDRVELRVLG+V A+IRV+ FDSPGVQVSV
Sbjct: 197 SVRNVEATIAVDRANLMQADAASLIKDASLNDRVELRVLGDVSAKIRVMNFDSPGVQVSV 256

Query: 298 DCSIVISPRNQSLTSKQCGFDGFSL 314
           DC+IVISPR QSLT KQCGFDG ++
Sbjct: 257 DCAIVISPRKQSLTYKQCGFDGLTV 275

[Close]

BLAST of CmoCh04G005410 vs. NCBI nr
Match: gi|568877715|ref|XP_006491866.1| (PREDICTED: uncharacterized protein LOC102625126 [Citrus sinensis])

HSP 1 Score: 325.9 bits (834), Expect = 7.9e-86
Identity = 187/266 (70.30%), Postives = 205/266 (77.07%), Query Frame = 1


Query: 58  SPLPSMPP-SRPNSDSQNARFPSPPSSPPLSRQQ---------HFGYDTTSSSSSASFRG 117
           S  P MPP ++PN    + R P PP  PP  + Q         H  Y TTSSSSSASFRG
Sbjct: 17  SSQPKMPPQTQPNGTHHHQRRPHPPPPPPPLQPQSQYHHHHDHHQYYPTTSSSSSASFRG 76

Query: 118 CCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQ 177
           CCCCL LLFSFIALL LA+VL+V LAVKPKKPQFDLQ+VGVQYMGI+TPN    SS D  
Sbjct: 77  CCCCLFLLFSFIALLILAVVLIVFLAVKPKKPQFDLQQVGVQYMGISTPN--PTSSVDPS 136

Query: 178 TVTTPTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEA 237
           T    T   TSA+LSL I LLFTA NPNKVGIKYG S+FTVMYRGIPLGKA VPGFYQ A
Sbjct: 137 T----TIAATSASLSLTIHLLFTAANPNKVGIKYGESKFTVMYRGIPLGKASVPGFYQGA 196

Query: 238 HSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVS 297
           HS R VEA IAVDR NL+QADAA LI+DASLNDRVELRVLG+V A+IRV+ FDSPGVQVS
Sbjct: 197 HSVRNVEATIAVDRANLMQADAASLIKDASLNDRVELRVLGDVSAKIRVMNFDSPGVQVS 256

Query: 298 VDCSIVISPRNQSLTSKQCGFDGFSL 314
           VDC+IVISPR QSLT KQCGFDG ++
Sbjct: 257 VDCAIVISPRKQSLTYKQCGFDGLTV 276

[Close]

BLAST of CmoCh04G005410 vs. NCBI nr
Match: gi|590683364|ref|XP_007041580.1| (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [Theobroma cacao])

HSP 1 Score: 325.1 bits (832), Expect = 1.4e-85
Identity = 181/272 (66.54%), Postives = 208/272 (76.47%), Query Frame = 1


Query: 42  PPPSRAPFNVQHDTHRSPLPSMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSS 101
           PP + +P +  H     P         N +  +    +PP  P    Q+H  Y   SSSS
Sbjct: 2   PPTNMSPNHQPHAREMRPTA-------NGEHHHRGLTAPPPRP----QRHHPYYPRSSSS 61

Query: 102 SASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSL 161
           SASF+GCCCCL LLFSF+ALL LA+VL++VLAVKPKKPQFDLQ+VGVQYMGI+T N  + 
Sbjct: 62  SASFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVGVQYMGISTSNPSAF 121

Query: 162 SSADSQTVTTPTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVP 221
             A +   TTPT    +A+LSL I +LFTAVNPNKVGIKYG SRFTVMYRGIPLGKA VP
Sbjct: 122 DGAAAAVTTTPT----TASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKAAVP 181

Query: 222 GFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDS 281
           GF+QEAHS R VEA IAVDR NL+QADAADLIRDASLNDRVELRVLG+VGA+IRVL+FDS
Sbjct: 182 GFFQEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGDVGAKIRVLDFDS 241

Query: 282 PGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           PGVQVS+DC+IVISPR QSLT KQCGFDG S+
Sbjct: 242 PGVQVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

The following BLAST results are available for this feature:

BLAST of CmoCh04G005410 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G005410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9B0_CUCSA	3.0e-124	80.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1	[more]
A0A067EH55_CITSI	6.5e-87	70.94	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023930mg PE=4 SV=1	[more]
A0A061DZ99_THECC	9.4e-86	66.54	Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS...	[more]
M5Y567_PRUPE	1.5e-83	61.22	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1	[more]
F6H1R4_VITVI	2.0e-83	70.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00370 PE=4 SV=...	[more]

BLAST of CmoCh04G005410 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01080.1	2.1e-76	64.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT3G54200.1	1.6e-07	22.67	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of CmoCh04G005410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112197\|ref\|XP_008456109.1\|	1.1e-124	81.15	PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo]	[more]
gi\|449446081\|ref\|XP_004140800.1\|	4.3e-124	80.83	PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus]	[more]
gi\|641834195\|gb\|KDO53195.1\|	9.4e-87	70.94	hypothetical protein CISIN_1g023930mg [Citrus sinensis]	[more]
gi\|568877715\|ref\|XP_006491866.1\|	7.9e-86	70.30	PREDICTED: uncharacterized protein LOC102625126 [Citrus sinensis]	[more]
gi\|590683364\|ref\|XP_007041580.1\|	1.4e-85	66.54	Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [T...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G005410.1	CmoCh04G005410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 191..288 score: 6.9
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 13..43 score: 1.7E-134coord: 64..311 score: 1.7E
None	No IPR available	PANTHER	PTHR31234:SF8	EXPRESSED PROTEIN	coord: 64..311 score: 1.7E-134coord: 13..43 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G005410	Cucsa.244220	Cucumber (Gy14) v1	cgycmoB0687
CmoCh04G005410	CmaCh04G005020	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G005410	Cla013056	Watermelon (97103) v1	cmowmB699
CmoCh04G005410	Csa3G209460	Cucumber (Chinese Long) v2	cmocuB687
CmoCh04G005410	MELO3C019499	Melon (DHL92) v3.5.1	cmomeB683
CmoCh04G005410	ClCG05G009890	Watermelon (Charleston Gray)	cmowcgB660
CmoCh04G005410	CSPI03G18650	Wild cucumber (PI 183967)	cmocpiB698
CmoCh04G005410	Lsi05G002020	Bottle gourd (USVL1VR-Ls)	cmolsiB683
CmoCh04G005410	Cp4.1LG01g02100	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G005410	MELO3C031692.2	Melon (DHL92) v3.6.1	cmomedB774
CmoCh04G005410	CsaV3_3G018700	Cucumber (Chinese Long) v3	cmocucB0814
CmoCh04G005410	Cla97C05G092300	Watermelon (97103) v2	cmowmbB735
CmoCh04G005410	Bhi01G001245	Wax gourd	cmowgoB0849
CmoCh04G005410	CsGy3G018490	Cucumber (Gy14) v2	cgybcmoB386
CmoCh04G005410	Carg08172	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G005410	Silver-seed gourd	carcmoB0899
CmoCh04G005410	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G005410	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G005410	Melon (DHL92) v3.5.1	cmomeB682
CmoCh04G005410	Watermelon (Charleston Gray)	cmowcgB658
CmoCh04G005410	Watermelon (97103) v1	cmowmB697
CmoCh04G005410	Cucurbita pepo (Zucchini)	cmocpeB668