Cp4.1LG01g02100 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g02100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Late embryogenesis abundant protein
Location	Cp4.1LG01 : 2620215 .. 2623172 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTTAACTAAAGGTCCGGTAGTTAATGCTCTATGAATTATTGTTTTCTTAGGAAGAGCATGTTCAGCTAAATATGGTAGTACTACAGCACCTTACTTTATAAGCTTCAGTTTATTGATCATATGGGATAGTTGCAATGCTCTTGATTATCTTTAGATAAAGTGCTTTTTAACTAATTAAAACCAAATTTGCATCAAATTTGAGCTCAATAATAGAAAGAAATTGTTAAGTATTTTTGTTTGAGGTAATTATGAACAAGAAAAAAAAAAAGGGGAAATAGAAGATAGAGTCAGAAACTTTTACTTTTGACACAATGTGGCTTTAGTTGAGCATTAAGCAAAGTATCCAAAGCCACGCACATTCTCACTGCAAGCTCTCTCTCTCTCTGTCTCTTTCCCTGTCTAGAAAACCCGAAGGATTCACTGAAACAGGAAGACCAGAGCTTAATCAACCATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCGGTTGCAAGCAACAACAATCACCGTCCTCTTCCACCGCCACCGTCAAGAGCTCCCTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGAGTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCTGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACAACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTCCTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAACTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCCCCCGGCGTTCAGGTCAGTTCCTTTTTCTTCCCATTTCTCGTCTTCTTTTGCACGCATTTTCCTCCCGCTTCGCTTTTTTATTTATTTATTTATTTTTTTTTTATTTTAACTTTTTTAAGTTTTAAAATTATAATTTTAACATTTAGTCTATCAAATTTGTGCTTCCTATTTATTTAATTTATTTAAAAAAAAAAGTATAGTTTATATTTTATGATCCATAAATTAGTGGATTAAAGTTTTATAATTAAATTAAAATGGTATAATATTTTAATAGAAAAAATAAATGTGAGTTAGGAAGCCGCGCTAATAATAGTAGGGGCAGTGTGTTTTAAGGATTTATTATTATTTATTAAAAAAAAAAAAGCTTCAATTTATTAATTTAATACTTTGAATTATCCATATAGAAATCATATATGTCGATAGCTCAACTAACATGTATTTTTAATTAAGAAAAATAAAGTTTTCCCTAAAAAAATAAAATTCAAAATTAATTTAATTCAAACCCAAGTAATTAAGTAACTTAAAAAATGATGATGTAAAAGTATTTTTTGAGGCAATTAGCTAATACAAAATAATTCTCAATCCCAAAAAAAATAGACAAGAATAATTGTGATTTTTTCTTTTAAATTCAATAATTTTTATTCTTGTTTTTTTAAATATATATATATATGTGTATATATTTATTAATCATATTTACATTTTGTTTTTCTTCCGTAAAAAAAATAATATTATTATTTGAAAAGAATAAAATTAAAATAAAAAAAAGTATTAAAAAGTCAAAGTGATAAAACATTGGGAAACCGCCGTCGAAGAAAACGGTGCCGCTTAGTTGCTTTACGACAAAATGGTGGGGGCCACACCGACCGAATAAAACTGCTTTGTTTTTTTCAACCCTTTCACATTTGGGAGTTTTTATTATTTTTTTTATAAATATTTTATTTAACCTATTTACTTTATCCTTTTACTCATCATGTCTTGTCCCTATTTTATCTACCTAATATAATAATAATAATAATATCACCTTTTTTTACATACCCATTGTGTTTAATTAGTTTTAACCTTTTTTTTTTCTTTTTAATCGAAGATTCAAATTCTCGTACTCCTTTTTAAATATAAGTATATTCCTATTTTACCATTGAATCATGTCGAGGAATAATGAAAATCATGAAAATATATATTTTTTTCTTAAAGAAAATGTCAAACTCAACTACTAATCATTACTCAGTTTATATTGCATGATCAAGTTTTATCGTGTTAAGTTCATTTTGTTCTTGTGATTTTGTACGAGGTTTTGTTTATGGTTGTGTACGACAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGATTGTTCTTACTTATTTTCTTCACTCTCTATCTCTGGTCTTTTAATGTCAACAGAGATGGAATGAATGATTTTGAGAGGAAGAAGAAAAATGTACACAAAAAAAAAAAAAAAAAAAAAAAAAANGAAGTCCTTCAAAAGCAATGCCTTTTGATTCCCAAATTTTAAAACAAAAAGAATTGGGAGAATCTCAAACCTTTATTCTTTTTATATTTTGGCAACTTTGTTATCGGATTCAAATTATAAATCTTGTCTAC

mRNA sequence

CTCTTTAACTAAAGGTCCGGTAGTTAATGCTCTATGAATTATTGTTTTCTTAGGAAGAGCATGTTCAGCTAAATATGGTAGTACTACAGCACCTTACTTTATAAGCTTCAGTTTATTGATCATATGGGATAGTTGCAATGCTCTTGATTATCTTTAGATAAAGTGCTTTTTAACTAATTAAAACCAAATTTGCATCAAATTTGAGCTCAATAATAGAAAGAAATTGTTAAGTATTTTTGTTTGAGGTAATTATGAACAAGAAAAAAAAAAAGGGGAAATAGAAGATAGAGTCAGAAACTTTTACTTTTGACACAATGTGGCTTTAGTTGAGCATTAAGCAAAGTATCCAAAGCCACGCACATTCTCACTGCAAGCTCTCTCTCTCTCTGTCTCTTTCCCTGTCTAGAAAACCCGAAGGATTCACTGAAACAGGAAGACCAGAGCTTAATCAACCATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCGGTTGCAAGCAACAACAATCACCGTCCTCTTCCACCGCCACCGTCAAGAGCTCCCTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGAGTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCTGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACAACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTCCTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAACTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCCCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGATTGTTCTTACTTATTTTCTTCACTCTCTATCTCTGGTCTTTTAATGTCAACAGAGATGGAATGAATGATTTTGAGAGGAAGAAGAAAAATGTACACAAAAAAAAAAAAAAAAAAAAAAAAAANGAAGTCCTTCAAAAGCAATGCCTTTTGATTCCCAAATTTTAAAACAAAAAGAATTGGGAGAATCTCAAACCTTTATTCTTTTTATATTTTGGCAACTTTGTTATCGGATTCAAATTATAAATCTTGTCTAC

Coding sequence (CDS)

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCGGTTGCAAGCAACAACAATCACCGTCCTCTTCCACCGCCACCGTCAAGAGCTCCCTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGAGTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCTGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACAACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTCCTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAACTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCCCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

Protein sequence

MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAVASNNNHRPLPPPPSRAPFNVQHDTHRSPLPSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL

Homology

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BLAST of Cp4.1LG01g02100 vs. TrEMBL
Match: A0A0A0L9B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.0e-124
Identity = 256/316 (81.01%), Postives = 276/316 (87.34%), Query Frame = 1


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAVASNNNHRP-LPPPPSRAPFNVQHDTHRSP 60
           MEEMTSRP +N RN   Q PLPPPPSR      +NNHRP LPPPPSRAPFN+Q +    P
Sbjct: 1   MEEMTSRPQLNPRNT--QPPLPPPPSR----RPDNNHRPPLPPPPSRAPFNLQTNPRSPP 60

Query: 61  LPSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFI 120
            PS   + PNS ++N R+PSPPS PP SRRQHFGY   ++SSS S RGCCCCLCLLFSFI
Sbjct: 61  FPS---TTPNSNTRNTRYPSPPS-PPSSRRQHFGYG--AASSSPSLRGCCCCLCLLFSFI 120

Query: 121 ALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTTT 180
           ALLA+AIVLV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T  T    T+TT
Sbjct: 121 ALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAAT----TSTT 180

Query: 181 SAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMI 240
           SA+LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA I
Sbjct: 181 SASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATI 240

Query: 241 AVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPR 300
           AVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPR
Sbjct: 241 AVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPR 300

Query: 301 NQSLTSKQCGFDGFSL 316
           NQSLTSKQCGFDGFSL
Sbjct: 301 NQSLTSKQCGFDGFSL 300

[Close]

BLAST of Cp4.1LG01g02100 vs. TrEMBL
Match: A0A067EH55_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023930mg PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86
Identity = 187/267 (70.04%), Postives = 206/267 (77.15%), Query Frame = 1


Query: 58  SPLPSMPP-SRPNSESQNARFPSPPSSPPLSRRQ--------HFGYDTTSSSSSASFRGC 117
           S  P MPP ++PN    + R P PP  PPL  +         H  Y TTSSSSSASFRGC
Sbjct: 17  SSQPKMPPQTQPNGTHHHQRRPHPPPPPPLQPQSQYHHHHDHHQYYPTTSSSSSASFRGC 76

Query: 118 CCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQT 177
           CCCL LLFSFIALL LA+VL+V LAVKPKKPQFDLQ+VGVQYMGI+TPN    SS D   
Sbjct: 77  CCCLFLLFSFIALLILAVVLIVFLAVKPKKPQFDLQQVGVQYMGISTPN--PTSSVD--- 136

Query: 178 VTTPTPTTTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQE 237
              P+ T   TSA+LSL I LLFTA NPNKVGIKYG S+FTVMYRGIPLGKA VPGFYQ 
Sbjct: 137 ---PSTTIAATSASLSLTIHLLFTAANPNKVGIKYGESKFTVMYRGIPLGKASVPGFYQG 196

Query: 238 AHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQV 297
           AHS R VEA IAVDR NL+QADAA LI+DASLNDRVELRVLG+V A+IRV+ FDSPGVQV
Sbjct: 197 AHSVRNVEATIAVDRANLMQADAASLIKDASLNDRVELRVLGDVSAKIRVMNFDSPGVQV 256

Query: 298 SVDCSIVISPRNQSLTSKQCGFDGFSL 316
           SVDC+IVISPR QSLT KQCGFDG ++
Sbjct: 257 SVDCAIVISPRKQSLTYKQCGFDGLTV 275

[Close]

BLAST of Cp4.1LG01g02100 vs. TrEMBL
Match: A0A061DZ99_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao GN=TCM_006430 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.1e-85
Identity = 181/274 (66.06%), Postives = 208/274 (75.91%), Query Frame = 1


Query: 42  PPPSRAPFNVQHDTHRSPLPSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSS 101
           PP + +P +  H     P         N E  +    +PP  P    ++H  Y   SSSS
Sbjct: 2   PPTNMSPNHQPHAREMRPTA-------NGEHHHRGLTAPPPRP----QRHHPYYPRSSSS 61

Query: 102 SASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSL 161
           SASF+GCCCCL LLFSF+ALL LA+VL++VLAVKPKKPQFDLQ+VGVQYMGI+T N  + 
Sbjct: 62  SASFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVGVQYMGISTSNPSAF 121

Query: 162 SSADSQTVTTPTPTTTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAI 221
             A +   TTPT      +A+LSL I +LFTAVNPNKVGIKYG SRFTVMYRGIPLGKA 
Sbjct: 122 DGAAAAVTTTPT------TASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKAA 181

Query: 222 VPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEF 281
           VPGF+QEAHS R VEA IAVDR NL+QADAADLIRDASLNDRVELRVLG+VGA+IRVL+F
Sbjct: 182 VPGFFQEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGDVGAKIRVLDF 241

Query: 282 DSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 316
           DSPGVQVS+DC+IVISPR QSLT KQCGFDG S+
Sbjct: 242 DSPGVQVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

[Close]

BLAST of Cp4.1LG01g02100 vs. TrEMBL
Match: M5Y567_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 4.0e-84
Identity = 184/274 (67.15%), Postives = 210/274 (76.64%), Query Frame = 1


Query: 44  PSRAPFNVQHDTHRSPLPSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSS- 103
           P+  P    +  HR   P  PP RP           P SS P +   H  Y TTSSSSS 
Sbjct: 7   PNPTPNGTANGEHR---PRGPPPRP----------PPSSSNPHNSNHHPYYPTTSSSSSS 66

Query: 104 -ASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSL 163
            ASF+GCCCCL LLFSF+ALL LA+VLV++LAVKPKKPQFDLQ+VGVQYMGI +PN    
Sbjct: 67  SASFKGCCCCLFLLFSFLALLVLAVVLVIILAVKPKKPQFDLQQVGVQYMGINSPNPTPA 126

Query: 164 SSADSQTVTTPTPTTTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAI 223
           ++A      T  P    TSA+LSL+IR+LF+AVNPNKVGI+YG SRFTVMYRGIPLGKA 
Sbjct: 127 AAA------TADPNQNPTSASLSLSIRMLFSAVNPNKVGIRYGESRFTVMYRGIPLGKAS 186

Query: 224 VPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEF 283
           VPGF+Q+AH+ R+V A I+VDRVNLLQADAADLIRDASLNDRVELRVLG+VGA+IRVL F
Sbjct: 187 VPGFFQDAHTVRQVVATISVDRVNLLQADAADLIRDASLNDRVELRVLGDVGAKIRVLNF 246

Query: 284 DSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 316
           DSPGVQVSVDC+IVISPR QSLT KQCGFDG S+
Sbjct: 247 DSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 261

[Close]

BLAST of Cp4.1LG01g02100 vs. TrEMBL
Match: A0A067LHD5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16906 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 6.8e-84
Identity = 178/259 (68.73%), Postives = 204/259 (78.76%), Query Frame = 1


Query: 64  PPSRPNSESQNARFPSPPSSPPLSR-------RQHFGYDTTSSSSSASFRGCCCCLCLLF 123
           PP +P S +       PP  PP S          H  Y T+SSSSSAS +GCCCCL LLF
Sbjct: 3   PPPQPQSSASLNGDHRPPRPPPASNTHQNHHHHHHPYYPTSSSSSSASLKGCCCCLFLLF 62

Query: 124 SFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTT 183
           SF+ALL LAI L+++LAVKPKKPQFDLQ+VGVQYMGI+  N    +S D  T TT T  T
Sbjct: 63  SFLALLVLAIFLIIILAVKPKKPQFDLQQVGVQYMGISASNP---ASFDPSTTTTTTVAT 122

Query: 184 TTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVE 243
             T+A+LSL I +LFTAVNPNKVGIKYG SRFTVMY GIPLGKA VPGFYQEAHS+R+VE
Sbjct: 123 GPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYHGIPLGKASVPGFYQEAHSERQVE 182

Query: 244 AMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVI 303
           A I+VDR +L+QA+AA+LIRDASLNDRVELRVLGEVGA+IRVL+FDSPGVQVSV+C+IVI
Sbjct: 183 ATISVDRYSLMQANAAELIRDASLNDRVELRVLGEVGAKIRVLDFDSPGVQVSVNCAIVI 242

Query: 304 SPRNQSLTSKQCGFDGFSL 316
           SPR QSLT KQCGFDG S+
Sbjct: 243 SPRKQSLTYKQCGFDGLSV 258

[Close]

BLAST of Cp4.1LG01g02100 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 282.3 bits (721), Expect = 3.6e-76
Identity = 157/246 (63.82%), Postives = 187/246 (76.02%), Query Frame = 1


Query: 78  PSPPSS--------PPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIALLALAIVLV 137
           P PPSS        P  ++ Q   Y + SSSSSAS +GCCCCL LLF+F+ALL LA+VL+
Sbjct: 2   PPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLI 61

Query: 138 VVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTTTSAALSLNIRL 197
           V+LAVKPKKPQFDLQ+V V YMGI+ P+           V  PT      +A+LSL IR+
Sbjct: 62  VILAVKPKKPQFDLQQVAVVYMGISNPS----------AVLDPT------TASLSLTIRM 121

Query: 198 LFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQA 257
           LFTAVNPNKVGI+YG S FTVMY+G+PLG+A VPGFYQ+AHS + VEA I+VDRVNL+QA
Sbjct: 122 LFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQA 181

Query: 258 DAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCG 316
            AADL+RDASLNDRVEL V G+VGA+IRV+ FDSPGVQVSV+C I ISPR Q+L  KQCG
Sbjct: 182 HAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCG 231

[Close]

BLAST of Cp4.1LG01g02100 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 59/249 (23.69%), Postives = 101/249 (40.56%), Query Frame = 1


Query: 62  SMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIAL 121
           S+ P     E + A    PP  P  S  +    +T ++      R C  C+C     I L
Sbjct: 5   SIKPDDKKEEEKPATAMLPPPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILL 64

Query: 122 LALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTTTSA 181
           +A+ IV++     KPK+P   +  V V  +  +                   P       
Sbjct: 65  IAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASV-----------------NPLLLKVLL 124

Query: 182 ALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAV 241
            L+LN+ L  +  NPN++G  Y +S   + YRG  +G+A +P     A     +   + +
Sbjct: 125 NLTLNVDL--SLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTL 184

Query: 242 DRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQ 301
               LL      L+ D  +   + L    +V  ++ VL+     VQ S  C + IS  ++
Sbjct: 185 MADRLL--SETQLLSDV-MAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDR 231

Query: 302 SLTSKQCGF 311
           ++TS+ C +
Sbjct: 245 NVTSQHCKY 231

[Close]

BLAST of Cp4.1LG01g02100 vs. NCBI nr
Match: gi|659112197|ref|XP_008456109.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 8.7e-125
Identity = 255/315 (80.95%), Postives = 276/315 (87.62%), Query Frame = 1


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAVASNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP +N R+   Q PLPPPPSR      NN+HRPLPPPPSRAPFN+ H   RSP 
Sbjct: 1   MEEMTSRPQLNPRST--QPPLPPPPSRR---PHNNHHRPLPPPPSRAPFNL-HSNPRSP- 60

Query: 61  PSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
              P + PN  ++N R+PSPPS PP SRRQHFGY   ++SSS SFRGCCCCLCLLFSFIA
Sbjct: 61  -PFPSTAPNPNTRNTRYPSPPS-PPSSRRQHFGYG--AASSSPSFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTTTS 180
           LLA+AI+LV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T  T    T+TTS
Sbjct: 121 LLAIAIILVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAAT----TSTTS 180

Query: 181 AALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIA 240
           A+LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IA
Sbjct: 181 ASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIA 240

Query: 241 VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRN 300
           VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRN
Sbjct: 241 VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRN 300

Query: 301 QSLTSKQCGFDGFSL 316
           QSLTSKQCGFDGFSL
Sbjct: 301 QSLTSKQCGFDGFSL 300

[Close]

BLAST of Cp4.1LG01g02100 vs. NCBI nr
Match: gi|449446081|ref|XP_004140800.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 1.5e-124
Identity = 256/316 (81.01%), Postives = 276/316 (87.34%), Query Frame = 1


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAVASNNNHRP-LPPPPSRAPFNVQHDTHRSP 60
           MEEMTSRP +N RN   Q PLPPPPSR      +NNHRP LPPPPSRAPFN+Q +    P
Sbjct: 1   MEEMTSRPQLNPRNT--QPPLPPPPSR----RPDNNHRPPLPPPPSRAPFNLQTNPRSPP 60

Query: 61  LPSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFI 120
            PS   + PNS ++N R+PSPPS PP SRRQHFGY   ++SSS S RGCCCCLCLLFSFI
Sbjct: 61  FPS---TTPNSNTRNTRYPSPPS-PPSSRRQHFGYG--AASSSPSLRGCCCCLCLLFSFI 120

Query: 121 ALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTTT 180
           ALLA+AIVLV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T  T    T+TT
Sbjct: 121 ALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAAT----TSTT 180

Query: 181 SAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMI 240
           SA+LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA I
Sbjct: 181 SASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATI 240

Query: 241 AVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPR 300
           AVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPR
Sbjct: 241 AVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPR 300

Query: 301 NQSLTSKQCGFDGFSL 316
           NQSLTSKQCGFDGFSL
Sbjct: 301 NQSLTSKQCGFDGFSL 300

[Close]

BLAST of Cp4.1LG01g02100 vs. NCBI nr
Match: gi|641834195|gb|KDO53195.1| (hypothetical protein CISIN_1g023930mg [Citrus sinensis])

HSP 1 Score: 327.8 bits (839), Expect = 2.1e-86
Identity = 187/267 (70.04%), Postives = 206/267 (77.15%), Query Frame = 1


Query: 58  SPLPSMPP-SRPNSESQNARFPSPPSSPPLSRRQ--------HFGYDTTSSSSSASFRGC 117
           S  P MPP ++PN    + R P PP  PPL  +         H  Y TTSSSSSASFRGC
Sbjct: 17  SSQPKMPPQTQPNGTHHHQRRPHPPPPPPLQPQSQYHHHHDHHQYYPTTSSSSSASFRGC 76

Query: 118 CCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQT 177
           CCCL LLFSFIALL LA+VL+V LAVKPKKPQFDLQ+VGVQYMGI+TPN    SS D   
Sbjct: 77  CCCLFLLFSFIALLILAVVLIVFLAVKPKKPQFDLQQVGVQYMGISTPN--PTSSVD--- 136

Query: 178 VTTPTPTTTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQE 237
              P+ T   TSA+LSL I LLFTA NPNKVGIKYG S+FTVMYRGIPLGKA VPGFYQ 
Sbjct: 137 ---PSTTIAATSASLSLTIHLLFTAANPNKVGIKYGESKFTVMYRGIPLGKASVPGFYQG 196

Query: 238 AHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQV 297
           AHS R VEA IAVDR NL+QADAA LI+DASLNDRVELRVLG+V A+IRV+ FDSPGVQV
Sbjct: 197 AHSVRNVEATIAVDRANLMQADAASLIKDASLNDRVELRVLGDVSAKIRVMNFDSPGVQV 256

Query: 298 SVDCSIVISPRNQSLTSKQCGFDGFSL 316
           SVDC+IVISPR QSLT KQCGFDG ++
Sbjct: 257 SVDCAIVISPRKQSLTYKQCGFDGLTV 275

[Close]

BLAST of Cp4.1LG01g02100 vs. NCBI nr
Match: gi|568877715|ref|XP_006491866.1| (PREDICTED: uncharacterized protein LOC102625126 [Citrus sinensis])

HSP 1 Score: 325.9 bits (834), Expect = 8.0e-86
Identity = 187/268 (69.78%), Postives = 206/268 (76.87%), Query Frame = 1


Query: 58  SPLPSMPP-SRPNSESQNARFPSPPSSPPLSRRQ---------HFGYDTTSSSSSASFRG 117
           S  P MPP ++PN    + R P PP  PP  + Q         H  Y TTSSSSSASFRG
Sbjct: 17  SSQPKMPPQTQPNGTHHHQRRPHPPPPPPPLQPQSQYHHHHDHHQYYPTTSSSSSASFRG 76

Query: 118 CCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQ 177
           CCCCL LLFSFIALL LA+VL+V LAVKPKKPQFDLQ+VGVQYMGI+TPN    SS D  
Sbjct: 77  CCCCLFLLFSFIALLILAVVLIVFLAVKPKKPQFDLQQVGVQYMGISTPN--PTSSVD-- 136

Query: 178 TVTTPTPTTTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQ 237
               P+ T   TSA+LSL I LLFTA NPNKVGIKYG S+FTVMYRGIPLGKA VPGFYQ
Sbjct: 137 ----PSTTIAATSASLSLTIHLLFTAANPNKVGIKYGESKFTVMYRGIPLGKASVPGFYQ 196

Query: 238 EAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQ 297
            AHS R VEA IAVDR NL+QADAA LI+DASLNDRVELRVLG+V A+IRV+ FDSPGVQ
Sbjct: 197 GAHSVRNVEATIAVDRANLMQADAASLIKDASLNDRVELRVLGDVSAKIRVMNFDSPGVQ 256

Query: 298 VSVDCSIVISPRNQSLTSKQCGFDGFSL 316
           VSVDC+IVISPR QSLT KQCGFDG ++
Sbjct: 257 VSVDCAIVISPRKQSLTYKQCGFDGLTV 276

[Close]

BLAST of Cp4.1LG01g02100 vs. NCBI nr
Match: gi|590683364|ref|XP_007041580.1| (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [Theobroma cacao])

HSP 1 Score: 323.9 bits (829), Expect = 3.0e-85
Identity = 181/274 (66.06%), Postives = 208/274 (75.91%), Query Frame = 1


Query: 42  PPPSRAPFNVQHDTHRSPLPSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSS 101
           PP + +P +  H     P         N E  +    +PP  P    ++H  Y   SSSS
Sbjct: 2   PPTNMSPNHQPHAREMRPTA-------NGEHHHRGLTAPPPRP----QRHHPYYPRSSSS 61

Query: 102 SASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSL 161
           SASF+GCCCCL LLFSF+ALL LA+VL++VLAVKPKKPQFDLQ+VGVQYMGI+T N  + 
Sbjct: 62  SASFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVGVQYMGISTSNPSAF 121

Query: 162 SSADSQTVTTPTPTTTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAI 221
             A +   TTPT      +A+LSL I +LFTAVNPNKVGIKYG SRFTVMYRGIPLGKA 
Sbjct: 122 DGAAAAVTTTPT------TASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKAA 181

Query: 222 VPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEF 281
           VPGF+QEAHS R VEA IAVDR NL+QADAADLIRDASLNDRVELRVLG+VGA+IRVL+F
Sbjct: 182 VPGFFQEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGDVGAKIRVLDF 241

Query: 282 DSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 316
           DSPGVQVS+DC+IVISPR QSLT KQCGFDG S+
Sbjct: 242 DSPGVQVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g02100 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g02100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9B0_CUCSA	1.0e-124	81.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1	[more]
A0A067EH55_CITSI	1.5e-86	70.04	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023930mg PE=4 SV=1	[more]
A0A061DZ99_THECC	2.1e-85	66.06	Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS...	[more]
M5Y567_PRUPE	4.0e-84	67.15	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1	[more]
A0A067LHD5_JATCU	6.8e-84	68.73	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16906 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g02100 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01080.1	3.6e-76	63.82	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT3G54200.1	1.0e-06	23.69	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Cp4.1LG01g02100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112197\|ref\|XP_008456109.1\|	8.7e-125	80.95	PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo]	[more]
gi\|449446081\|ref\|XP_004140800.1\|	1.5e-124	81.01	PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus]	[more]
gi\|641834195\|gb\|KDO53195.1\|	2.1e-86	70.04	hypothetical protein CISIN_1g023930mg [Citrus sinensis]	[more]
gi\|568877715\|ref\|XP_006491866.1\|	8.0e-86	69.78	PREDICTED: uncharacterized protein LOC102625126 [Citrus sinensis]	[more]
gi\|590683364\|ref\|XP_007041580.1\|	3.0e-85	66.06	Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [T...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g02100.1	Cp4.1LG01g02100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 193..290 score: 7.0
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 64..158 score: 9.3E-134coord: 13..43 score: 9.3E-134coord: 175..313 score: 9.3E
None	No IPR available	PANTHER	PTHR31234:SF8	EXPRESSED PROTEIN	coord: 13..43 score: 9.3E-134coord: 175..313 score: 9.3E-134coord: 64..158 score: 9.3E
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 183..271 score: 7.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g02100	Cucsa.244220	Cucumber (Gy14) v1	cgycpeB0654
Cp4.1LG01g02100	CmaCh04G005020	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g02100	CmoCh04G005410	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g02100	Cla013056	Watermelon (97103) v1	cpewmB433
Cp4.1LG01g02100	Csa3G209460	Cucumber (Chinese Long) v2	cpecuB389
Cp4.1LG01g02100	MELO3C019499	Melon (DHL92) v3.5.1	cpemeB412
Cp4.1LG01g02100	ClCG05G009890	Watermelon (Charleston Gray)	cpewcgB394
Cp4.1LG01g02100	CSPI03G18650	Wild cucumber (PI 183967)	cpecpiB388
Cp4.1LG01g02100	Lsi05G002020	Bottle gourd (USVL1VR-Ls)	cpelsiB369
Cp4.1LG01g02100	MELO3C031692.2	Melon (DHL92) v3.6.1	cpemedB481
Cp4.1LG01g02100	CsaV3_3G018700	Cucumber (Chinese Long) v3	cpecucB0484
Cp4.1LG01g02100	Bhi01G001245	Wax gourd	cpewgoB0517
Cp4.1LG01g02100	CsGy3G018490	Cucumber (Gy14) v2	cgybcpeB362
Cp4.1LG01g02100	Carg08172	Silver-seed gourd	carcpeB0527

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g02100	Cucurbita pepo (Zucchini)	cpecpeB234
Cp4.1LG01g02100	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g02100	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g02100	Watermelon (Charleston Gray)	cpewcgB392
Cp4.1LG01g02100	Watermelon (97103) v1	cpewmB431
Cp4.1LG01g02100	Melon (DHL92) v3.5.1	cpemeB411
Cp4.1LG01g02100	Silver-seed gourd	carcpeB0927
Cp4.1LG01g02100	Wax gourd	cpewgoB0516