Cucsa.244220 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.244220
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLate embryogenesis abundant protein
Locationscaffold02135 : 44739 .. 45581 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCACGACCTCAACTGAACCCTCGCAACACGCAACCTCCTCTACCACCCCCACCGTCACGACGACCCGACAACAACCATCGCCCTCCTCTCCCGCCACCACCCTCAAGAGCTCCCTTCAATCTTCAAACCAATCCCCGTTCTCCTCCATTCCCATCAACCACACCTAATTCCAACACTCGCAACACTCGCTATCCATCTCCGCCATCTCCGCCGTCCTCTCGACGGCAACATTTCGGTTACGGAGCGGCATCCTCATCACCTTCCTTACGAGGCTGCTGCTGTTGCCTCTGCCTCCTCTTCTCATTCATCGCTCTCCTCGCGGTCGCCATCGTCCTCGTCATTGTCCTAGCTGTCAAACCTAAAAAGCCTCAGTTCGACCTCCAACGAGTCGGTGTTCAATACATGGGAATAACCGCTCCAAATCTCTTCTCATTGTCATCCTCCGACACCGAGACTGCTGCAACAACTTCAACGACATCCGCATCGTTGTCGCTCAACATTCGATTGCTGTTCACGGCGGTGAATCCGAACAAAGTAGGAATAAAATACGGGGATTCGAGGTTTACGGTGATGTACAGAGGGATACCGCTAGGGAAAGCGATAGTACCTGGATTTTACCAAGAGGCACATAGTGAAAGAGAGGTGGAGGCGACGATAGCCGTAGATCGAGTGAATTTGCTTCAGGCGGACGCGGCCGATCTGATAAGAGACGCTTCGTTGAACGATCGAGTTGAACTGAGGGTTTTGGGTGAAGTTGGCGCCAGGATCCGCGTCTTGGATTTTGATTCGCCGGGCGTCCAGGTCAGTTTCCCACCTCTTTTTTCTTCTTCTTCTTAA

mRNA sequence

ATGACGTCACGACCTCAACTGAACCCTCGCAACACGCAACCTCCTCTACCACCCCCACCGTCACGACGACCCGACAACAACCATCGCCCTCCTCTCCCGCCACCACCCTCAAGAGCTCCCTTCAATCTTCAAACCAATCCCCGTTCTCCTCCATTCCCATCAACCACACCTAATTCCAACACTCGCAACACTCGCTATCCATCTCCGCCATCTCCGCCGTCCTCTCGACGGCAACATTTCGGTTACGGAGCGGCATCCTCATCACCTTCCTTACGAGGCTGCTGCTGTTGCCTCTGCCTCCTCTTCTCATTCATCGCTCTCCTCGCGGTCGCCATCGTCCTCGTCATTGTCCTAGCTGTCAAACCTAAAAAGCCTCAGTTCGACCTCCAACGAGTCGGTGTTCAATACATGGGAATAACCGCTCCAAATCTCTTCTCATTGTCATCCTCCGACACCGAGACTGCTGCAACAACTTCAACGACATCCGCATCGTTGTCGCTCAACATTCGATTGCTGTTCACGGCGGTGAATCCGAACAAAGTAGGAATAAAATACGGGGATTCGAGGTTTACGGTGATGTACAGAGGGATACCGCTAGGGAAAGCGATAGTACCTGGATTTTACCAAGAGGCACATAGTGAAAGAGAGGTGGAGGCGACGATAGCCGTAGATCGAGTGAATTTGCTTCAGGCGGACGCGGCCGATCTGATAAGAGACGCTTCGTTGAACGATCGAGTTGAACTGAGGGTTTTGGGTGAAGTTGGCGCCAGGATCCGCGTCTTGGATTTTGATTCGCCGGGCGTCCAGGTCAGTTTCCCACCTCTTTTTTCTTCTTCTTCTTAA

Coding sequence (CDS)

ATGACGTCACGACCTCAACTGAACCCTCGCAACACGCAACCTCCTCTACCACCCCCACCGTCACGACGACCCGACAACAACCATCGCCCTCCTCTCCCGCCACCACCCTCAAGAGCTCCCTTCAATCTTCAAACCAATCCCCGTTCTCCTCCATTCCCATCAACCACACCTAATTCCAACACTCGCAACACTCGCTATCCATCTCCGCCATCTCCGCCGTCCTCTCGACGGCAACATTTCGGTTACGGAGCGGCATCCTCATCACCTTCCTTACGAGGCTGCTGCTGTTGCCTCTGCCTCCTCTTCTCATTCATCGCTCTCCTCGCGGTCGCCATCGTCCTCGTCATTGTCCTAGCTGTCAAACCTAAAAAGCCTCAGTTCGACCTCCAACGAGTCGGTGTTCAATACATGGGAATAACCGCTCCAAATCTCTTCTCATTGTCATCCTCCGACACCGAGACTGCTGCAACAACTTCAACGACATCCGCATCGTTGTCGCTCAACATTCGATTGCTGTTCACGGCGGTGAATCCGAACAAAGTAGGAATAAAATACGGGGATTCGAGGTTTACGGTGATGTACAGAGGGATACCGCTAGGGAAAGCGATAGTACCTGGATTTTACCAAGAGGCACATAGTGAAAGAGAGGTGGAGGCGACGATAGCCGTAGATCGAGTGAATTTGCTTCAGGCGGACGCGGCCGATCTGATAAGAGACGCTTCGTTGAACGATCGAGTTGAACTGAGGGTTTTGGGTGAAGTTGGCGCCAGGATCCGCGTCTTGGATTTTGATTCGCCGGGCGTCCAGGTCAGTTTCCCACCTCTTTTTTCTTCTTCTTCTTAA

Protein sequence

MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSFPPLFSSSS*
Homology
[Close]
BLAST of Cucsa.244220 vs. Swiss-Prot
Match: GP1_CHLRE (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii GN=GP1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06
Identity = 30/71 (42.25%), Postives = 33/71 (46.48%), Query Frame = 1 

Query: 5   PQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNT 64
           P   P +  PP P PPS +P     PP PPPP          P  PPFP+ TP       
Sbjct: 242 PSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPP---------PPRPPFPANTPMP----- 296

Query: 65  RYPSPPSPPSS 76
             PSPPSPP S
Sbjct: 302 --PSPPSPPPS 296


HSP 2 Score: 47.8 bits (112), Expect = 2.3e-04
Identity = 29/70 (41.43%), Postives = 34/70 (48.57%), Query Frame = 1 

Query: 5   PQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNT 64
           P   P +  PP P PPS  P +   PP P PPS AP     +P SP  PS  P S    +
Sbjct: 41  PSPAPPSPAPPSPAPPSPAPPSP-APPSPGPPSPAP----PSPPSPAPPSPAPPSPAPPS 100

Query: 65  RYPSPPSPPS 75
             P  P+PPS
Sbjct: 101 PAPPSPAPPS 105


HSP 3 Score: 46.6 bits (109), Expect = 5.2e-04
Identity = 29/70 (41.43%), Postives = 34/70 (48.57%), Query Frame = 1 

Query: 5   PQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNT 64
           P   P +  PP P PPS  P +   PP P PPS AP +    P SP  PS  P S    +
Sbjct: 56  PSPAPPSPAPPSPGPPSPAPPS---PPSPAPPSPAPPS--PAPPSPAPPSPAPPSPAPPS 115

Query: 65  RYPSPPSPPS 75
             P  P+PPS
Sbjct: 116 PAPPSPAPPS 120

[Close]
BLAST of Cucsa.244220 vs. TrEMBL
Match: A0A0A0L9B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 1.8e-152
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSN 60
           MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSN
Sbjct: 4   MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSN 63

Query: 61  TRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAV 120
           TRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAV
Sbjct: 64  TRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAV 123

Query: 121 KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK 180
           KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK
Sbjct: 124 KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK 183

Query: 181 VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA 240
           VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA
Sbjct: 184 VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA 243

Query: 241 SLNDRVELRVLGEVGARIRVLDFDSPGVQVS 272
           SLNDRVELRVLGEVGARIRVLDFDSPGVQVS
Sbjct: 244 SLNDRVELRVLGEVGARIRVLDFDSPGVQVS 274

[Close]
BLAST of Cucsa.244220 vs. TrEMBL
Match: W9RV36_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024155 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 9.0e-80
Identity = 169/239 (70.71%), Postives = 188/239 (78.66%), Query Frame = 1 

Query: 34  PPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRG 93
           PPPSR P      P  PP PS   N+N ++  YP+  S              SSS S RG
Sbjct: 10  PPPSRPP------PSRPP-PSQPSNNNYQHY-YPTTSS--------------SSSASFRG 69

Query: 94  CCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTE 153
           CCCCL LLFSF+ALL +AIVLVI+LAVKPKKPQFDLQ+VGVQYMGITAPN  S  ++ T+
Sbjct: 70  CCCCLFLLFSFLALLVLAIVLVIILAVKPKKPQFDLQQVGVQYMGITAPNPTSAMTTTTD 129

Query: 154 TAATTSTTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHS 213
                 TT+ASLSLNIR+LFTAVNPNKVGIKYG+SRF+VMYRGIPLGKA VPGFYQEAHS
Sbjct: 130 PNPNP-TTTASLSLNIRMLFTAVNPNKVGIKYGESRFSVMYRGIPLGKASVPGFYQEAHS 189

Query: 214 EREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSF 273
            R+V ATIAVDRVNLLQADAADLIRDASLNDRVELRVLG+VGA+IRVL+FDSPGVQV F
Sbjct: 190 VRQVVATIAVDRVNLLQADAADLIRDASLNDRVELRVLGDVGAKIRVLNFDSPGVQVDF 225

[Close]
BLAST of Cucsa.244220 vs. TrEMBL
Match: B9SPL8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1183370 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.9e-79
Identity = 162/240 (67.50%), Postives = 185/240 (77.08%), Query Frame = 1 

Query: 34  PPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFG--YGAASSSPSL 93
           PPP  AP   Q +  +    +T+ N   R T+ P P        QH    Y  +SSS SL
Sbjct: 2   PPPGPAPQQQQHHHPT----TTSQNGEHRPTQRPPPQQQQHHHHQHHHPYYPTSSSSASL 61

Query: 94  RGCCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSD 153
           +GCCCCL LLFSF+ALL +AI L+I+LAVKPKKPQFDLQ+VGVQYMGI+A N    +S D
Sbjct: 62  KGCCCCLFLLFSFLALLVLAIFLIIILAVKPKKPQFDLQQVGVQYMGISASN--PTASLD 121

Query: 154 TETAATTSTTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEA 213
             T   T  T+ASLSL I +LFTAVNPNKVGIKYG+SRFTVMY GIPLGKA VPGFYQEA
Sbjct: 122 PTTTVATGPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYHGIPLGKASVPGFYQEA 181

Query: 214 HSEREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVS 272
           HSER+VEATI+VDR +L+QA+AADLIRDASLNDRVELRVLGEVGA+IRVLDFDSPGVQVS
Sbjct: 182 HSERQVEATISVDRYSLMQANAADLIRDASLNDRVELRVLGEVGAKIRVLDFDSPGVQVS 235

[Close]
BLAST of Cucsa.244220 vs. TrEMBL
Match: A0A067LHD5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16906 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.7e-79
Identity = 162/243 (66.67%), Postives = 186/243 (76.54%), Query Frame = 1 

Query: 30  PPLPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFGYGAASSSP 89
           PP P P S A  N    P  PP P++  + N  +  +P  P+  SS           SS 
Sbjct: 2   PPPPQPQSSASLNGDHRPPRPP-PASNTHQNHHHHHHPYYPTSSSS-----------SSA 61

Query: 90  SLRGCCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLS- 149
           SL+GCCCCL LLFSF+ALL +AI L+I+LAVKPKKPQFDLQ+VGVQYMGI+A N  S   
Sbjct: 62  SLKGCCCCLFLLFSFLALLVLAIFLIIILAVKPKKPQFDLQQVGVQYMGISASNPASFDP 121

Query: 150 SSDTETAATTSTTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFY 209
           S+ T T   T  T+ASLSL I +LFTAVNPNKVGIKYG+SRFTVMY GIPLGKA VPGFY
Sbjct: 122 STTTTTTVATGPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYHGIPLGKASVPGFY 181

Query: 210 QEAHSEREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGV 269
           QEAHSER+VEATI+VDR +L+QA+AA+LIRDASLNDRVELRVLGEVGA+IRVLDFDSPGV
Sbjct: 182 QEAHSERQVEATISVDRYSLMQANAAELIRDASLNDRVELRVLGEVGAKIRVLDFDSPGV 232

Query: 270 QVS 272
           QVS
Sbjct: 242 QVS 232

[Close]
BLAST of Cucsa.244220 vs. TrEMBL
Match: A0A061DZ99_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao GN=TCM_006430 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-76
Identity = 157/233 (67.38%), Postives = 180/233 (77.25%), Query Frame = 1 

Query: 40  PFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFGYG-AASSSPSLRGCCCCL 99
           P N+  N   P      P +N  +        PP  +R H  Y  ++SSS S +GCCCCL
Sbjct: 3   PTNMSPN-HQPHAREMRPTANGEHHHRGLTAPPPRPQRHHPYYPRSSSSSASFKGCCCCL 62

Query: 100 CLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATT 159
            LLFSF+ALL +A+VL+IVLAVKPKKPQFDLQ+VGVQYMGI+  N  +   +    A TT
Sbjct: 63  FLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVGVQYMGISTSNPSAFDGA--AAAVTT 122

Query: 160 STTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVE 219
           + T+ASLSL I +LFTAVNPNKVGIKYG+SRFTVMYRGIPLGKA VPGF+QEAHS R VE
Sbjct: 123 TPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYRGIPLGKAAVPGFFQEAHSTRNVE 182

Query: 220 ATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVS 272
           ATIAVDR NL+QADAADLIRDASLNDRVELRVLG+VGA+IRVLDFDSPGVQVS
Sbjct: 183 ATIAVDRANLMQADAADLIRDASLNDRVELRVLGDVGAKIRVLDFDSPGVQVS 232

[Close]
BLAST of Cucsa.244220 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-70
Identity = 135/216 (62.50%), Postives = 167/216 (77.31%), Query Frame = 1 

Query: 69  PPSPPSSR-------------RQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLV 128
           PP P SSR             + ++   ++SSS SL+GCCCCL LLF+F+ALL +A+VL+
Sbjct: 2   PPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLI 61

Query: 129 IVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTA 188
           ++LAVKPKKPQFDLQ+V V YMGI+ P+            A    T+ASLSL IR+LFTA
Sbjct: 62  VILAVKPKKPQFDLQQVAVVYMGISNPS------------AVLDPTTASLSLTIRMLFTA 121

Query: 189 VNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAAD 248
           VNPNKVGI+YG+S FTVMY+G+PLG+A VPGFYQ+AHS + VEATI+VDRVNL+QA AAD
Sbjct: 122 VNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAAD 181

Query: 249 LIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVS 272
           L+RDASLNDRVEL V G+VGA+IRV++FDSPGVQVS
Sbjct: 182 LVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVS 205

[Close]
BLAST of Cucsa.244220 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 35/139 (25.18%), Postives = 56/139 (40.29%), Query Frame = 1 

Query: 67  PSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQ 126
           P  P+  S   Q    G A      R C  C+C     I L+A+ IV++     KPK+P 
Sbjct: 24  PPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPT 83

Query: 127 FDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNKVGIKYG 186
             +  V V  +               + +         L+L + +  +  NPN++G  Y 
Sbjct: 84  TTIDSVTVDRL---------------QASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYD 143

Query: 187 DSRFTVMYRGIPLGKAIVP 206
            S   + YRG  +G+A +P
Sbjct: 144 SSSALLNYRGQVIGEAPLP 147

[Close]
BLAST of Cucsa.244220 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 51/162 (31.48%), Postives = 68/162 (41.98%), Query Frame = 1 

Query: 53  PSTTPNSNTRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAI 112
           PS  P  N R  R+  P +PP  RR                CC C C  F F+ LL VA+
Sbjct: 37  PSKVP-LNQRPQRFV-PLAPPKKRRSC--------------CCRCFCYTFCFLLLLVVAV 96

Query: 113 ---VLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNI 172
              + ++ L  KPK P + + R+ +          F+L+   + T A   T         
Sbjct: 97  GASIGILYLVFKPKLPDYSIDRLQL--------TRFALNQDSSLTTAFNVT--------- 156

Query: 173 RLLFTAVNPN-KVGIKYGD-SRFTVMYRGIPLGKAIVPGFYQ 210
               TA NPN K+GI Y D S+ TV Y    L    +P FYQ
Sbjct: 157 ---ITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQ 162

[Close]
BLAST of Cucsa.244220 vs. TAIR10
Match: AT1G17620.1 (AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 51.6 bits (122), Expect = 9.1e-07
Identity = 61/261 (23.37%), Postives = 101/261 (38.70%), Query Frame = 1 

Query: 25  DNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFGYGA 84
           D+   P   PP         TNP  P   +   N+N    R      PP+ RR+      
Sbjct: 3   DDRVYPASKPPAIVGGGAPTTNPTFPANKAQLYNANRPAYR------PPAGRRR------ 62

Query: 85  ASSSPSLRGCCCCLCLLFSFIALLAVAIV----LVIVLAVKPKKPQFDLQRVGVQYMGIT 144
              +   RGCCC  C    F+ +L + IV     V+ L  +P++P F +  + +  +   
Sbjct: 63  ---TSHTRGCCCRCCCWTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNF- 122

Query: 145 APNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK-VGIKYGDSRFTVMYRG--- 204
                        T+A   TT+ SLS+  R      NPNK VG  Y  +  T +Y+    
Sbjct: 123 -------------TSAVRLTTAISLSVIAR------NPNKNVGFIYDVTDIT-LYKASTG 182

Query: 205 ----IPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVL- 264
               + +GK  +  F     +   + +TI      L +  A  L  D      V ++++ 
Sbjct: 183 GDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDLKAKKAVAIKIVL 227

Query: 265 -GEVGARIRVLDFDSPGVQVS 272
             +V  ++  L     G++V+
Sbjct: 243 NSKVKVKMGALKTPKSGIRVT 227

[Close]
BLAST of Cucsa.244220 vs. TAIR10
Match: AT5G23150.1 (AT5G23150.1 Tudor/PWWP/MBT domain-containing protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.5e-06
Identity = 31/71 (43.66%), Postives = 35/71 (49.30%), Query Frame = 1 

Query: 9    PRNTQPPLPP-PPSRRPDNNHRPP--LPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTR 68
            P+ + PPLPP PPS  P +   PP  LPPPP  A F     P  PP PS  P        
Sbjct: 1065 PQESPPPLPPLPPSPPPPSPPLPPSSLPPPPPAALF-----PPLPPPPSQPPPPPLSPPP 1124

Query: 69   YPSPPSPPSSR 77
             P PP PP S+
Sbjct: 1125 SPPPPPPPPSQ 1130

[Close]
BLAST of Cucsa.244220 vs. NCBI nr
Match: gi|449446081|ref|XP_004140800.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus])

HSP 1 Score: 546.6 bits (1407), Expect = 2.6e-152
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSN 60
           MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSN
Sbjct: 4   MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSN 63

Query: 61  TRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAV 120
           TRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAV
Sbjct: 64  TRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAV 123

Query: 121 KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK 180
           KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK
Sbjct: 124 KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK 183

Query: 181 VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA 240
           VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA
Sbjct: 184 VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA 243

Query: 241 SLNDRVELRVLGEVGARIRVLDFDSPGVQVS 272
           SLNDRVELRVLGEVGARIRVLDFDSPGVQVS
Sbjct: 244 SLNDRVELRVLGEVGARIRVLDFDSPGVQVS 274

[Close]
BLAST of Cucsa.244220 vs. NCBI nr
Match: gi|659112197|ref|XP_008456109.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo])

HSP 1 Score: 525.0 bits (1351), Expect = 8.0e-146
Identity = 259/271 (95.57%), Postives = 263/271 (97.05%), Query Frame = 1 

Query: 1   MTSRPQLNPRNTQPPLPPPPSRRPDNNHRPPLPPPPSRAPFNLQTNPRSPPFPSTTPNSN 60
           MTSRPQLNPR+TQPPLPPPPSRRP NNH  PLPPPPSRAPFNL +NPRSPPFPST PN N
Sbjct: 4   MTSRPQLNPRSTQPPLPPPPSRRPHNNHHRPLPPPPSRAPFNLHSNPRSPPFPSTAPNPN 63

Query: 61  TRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRGCCCCLCLLFSFIALLAVAIVLVIVLAV 120
           TRNTRYPSPPSPPSSRRQHFGYGAASSSPS RGCCCCLCLLFSFIALLA+AI+LVIVLAV
Sbjct: 64  TRNTRYPSPPSPPSSRRQHFGYGAASSSPSFRGCCCCLCLLFSFIALLAIAIILVIVLAV 123

Query: 121 KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAATTSTTSASLSLNIRLLFTAVNPNK 180
           KPKKPQFDLQRVGVQYMGITAPNLFSLSSSD ETAATTSTTSASLSLNIRLLFTAVNPNK
Sbjct: 124 KPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTSTTSASLSLNIRLLFTAVNPNK 183

Query: 181 VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA 240
           VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA
Sbjct: 184 VGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDA 243

Query: 241 SLNDRVELRVLGEVGARIRVLDFDSPGVQVS 272
           SLNDRVELRVLGEVGARIRVLDFDSPGVQVS
Sbjct: 244 SLNDRVELRVLGEVGARIRVLDFDSPGVQVS 274

[Close]
BLAST of Cucsa.244220 vs. NCBI nr
Match: gi|703127528|ref|XP_010103853.1| (hypothetical protein L484_024155 [Morus notabilis])

HSP 1 Score: 305.1 bits (780), Expect = 1.3e-79
Identity = 169/239 (70.71%), Postives = 188/239 (78.66%), Query Frame = 1 

Query: 34  PPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFGYGAASSSPSLRG 93
           PPPSR P      P  PP PS   N+N ++  YP+  S              SSS S RG
Sbjct: 10  PPPSRPP------PSRPP-PSQPSNNNYQHY-YPTTSS--------------SSSASFRG 69

Query: 94  CCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTE 153
           CCCCL LLFSF+ALL +AIVLVI+LAVKPKKPQFDLQ+VGVQYMGITAPN  S  ++ T+
Sbjct: 70  CCCCLFLLFSFLALLVLAIVLVIILAVKPKKPQFDLQQVGVQYMGITAPNPTSAMTTTTD 129

Query: 154 TAATTSTTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHS 213
                 TT+ASLSLNIR+LFTAVNPNKVGIKYG+SRF+VMYRGIPLGKA VPGFYQEAHS
Sbjct: 130 PNPNP-TTTASLSLNIRMLFTAVNPNKVGIKYGESRFSVMYRGIPLGKASVPGFYQEAHS 189

Query: 214 EREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSF 273
            R+V ATIAVDRVNLLQADAADLIRDASLNDRVELRVLG+VGA+IRVL+FDSPGVQV F
Sbjct: 190 VRQVVATIAVDRVNLLQADAADLIRDASLNDRVELRVLGDVGAKIRVLNFDSPGVQVDF 225

[Close]
BLAST of Cucsa.244220 vs. NCBI nr
Match: gi|255574042|ref|XP_002527937.1| (PREDICTED: uncharacterized protein LOC8273514 [Ricinus communis])

HSP 1 Score: 302.4 bits (773), Expect = 8.4e-79
Identity = 162/240 (67.50%), Postives = 185/240 (77.08%), Query Frame = 1 

Query: 34  PPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFG--YGAASSSPSL 93
           PPP  AP   Q +  +    +T+ N   R T+ P P        QH    Y  +SSS SL
Sbjct: 2   PPPGPAPQQQQHHHPT----TTSQNGEHRPTQRPPPQQQQHHHHQHHHPYYPTSSSSASL 61

Query: 94  RGCCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSD 153
           +GCCCCL LLFSF+ALL +AI L+I+LAVKPKKPQFDLQ+VGVQYMGI+A N    +S D
Sbjct: 62  KGCCCCLFLLFSFLALLVLAIFLIIILAVKPKKPQFDLQQVGVQYMGISASN--PTASLD 121

Query: 154 TETAATTSTTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEA 213
             T   T  T+ASLSL I +LFTAVNPNKVGIKYG+SRFTVMY GIPLGKA VPGFYQEA
Sbjct: 122 PTTTVATGPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYHGIPLGKASVPGFYQEA 181

Query: 214 HSEREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVS 272
           HSER+VEATI+VDR +L+QA+AADLIRDASLNDRVELRVLGEVGA+IRVLDFDSPGVQVS
Sbjct: 182 HSERQVEATISVDRYSLMQANAADLIRDASLNDRVELRVLGEVGAKIRVLDFDSPGVQVS 235

[Close]
BLAST of Cucsa.244220 vs. NCBI nr
Match: gi|802556282|ref|XP_012065648.1| (PREDICTED: uncharacterized protein LOC105628778 [Jatropha curcas])

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78
Identity = 162/243 (66.67%), Postives = 186/243 (76.54%), Query Frame = 1 

Query: 30  PPLPPPPSRAPFNLQTNPRSPPFPSTTPNSNTRNTRYPSPPSPPSSRRQHFGYGAASSSP 89
           PP P P S A  N    P  PP P++  + N  +  +P  P+  SS           SS 
Sbjct: 2   PPPPQPQSSASLNGDHRPPRPP-PASNTHQNHHHHHHPYYPTSSSS-----------SSA 61

Query: 90  SLRGCCCCLCLLFSFIALLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLS- 149
           SL+GCCCCL LLFSF+ALL +AI L+I+LAVKPKKPQFDLQ+VGVQYMGI+A N  S   
Sbjct: 62  SLKGCCCCLFLLFSFLALLVLAIFLIIILAVKPKKPQFDLQQVGVQYMGISASNPASFDP 121

Query: 150 SSDTETAATTSTTSASLSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFY 209
           S+ T T   T  T+ASLSL I +LFTAVNPNKVGIKYG+SRFTVMY GIPLGKA VPGFY
Sbjct: 122 STTTTTTVATGPTTASLSLTIHMLFTAVNPNKVGIKYGESRFTVMYHGIPLGKASVPGFY 181

Query: 210 QEAHSEREVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGV 269
           QEAHSER+VEATI+VDR +L+QA+AA+LIRDASLNDRVELRVLGEVGA+IRVLDFDSPGV
Sbjct: 182 QEAHSERQVEATISVDRYSLMQANAAELIRDASLNDRVELRVLGEVGAKIRVLDFDSPGV 232

Query: 270 QVS 272
           QVS
Sbjct: 242 QVS 232

The following BLAST results are available for this feature:
BLAST of Cucsa.244220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GP1_CHLRE4.3e-0642.25Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii GN=GP1 PE=1 SV=1[more]
BLAST of Cucsa.244220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9B0_CUCSA1.8e-152100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209460 PE=4 SV=1[more]
W9RV36_9ROSA9.0e-8070.71Uncharacterized protein OS=Morus notabilis GN=L484_024155 PE=4 SV=1[more]
B9SPL8_RICCO5.9e-7967.50Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1183370 PE=4 SV=1[more]
A0A067LHD5_JATCU7.7e-7966.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16906 PE=4 SV=1[more]
A0A061DZ99_THECC1.2e-7667.38Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS... [more]
BLAST of Cucsa.244220 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01080.14.4e-7062.50 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G54200.12.2e-0825.18 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT1G65690.12.2e-0831.48 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT1G17620.19.1e-0723.37 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G23150.13.5e-0643.66 Tudor/PWWP/MBT domain-containing protein[more]
BLAST of Cucsa.244220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446081|ref|XP_004140800.1|2.6e-152100.00PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus][more]
gi|659112197|ref|XP_008456109.1|8.0e-14695.57PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo][more]
gi|703127528|ref|XP_010103853.1|1.3e-7970.71hypothetical protein L484_024155 [Morus notabilis][more]
gi|255574042|ref|XP_002527937.1|8.4e-7967.50PREDICTED: uncharacterized protein LOC8273514 [Ricinus communis][more]
gi|802556282|ref|XP_012065648.1|1.1e-7866.67PREDICTED: uncharacterized protein LOC105628778 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.244220.1Cucsa.244220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 175..255
score: 1.1
NoneNo IPR availablePANTHERPTHR31234FAMILY NOT NAMEDcoord: 3..35
score: 4.4E-118coord: 53..271
score: 4.4E
NoneNo IPR availablePANTHERPTHR31234:SF8EXPRESSED PROTEINcoord: 3..35
score: 4.4E-118coord: 53..271
score: 4.4E
NoneNo IPR availableunknownSSF117070LEA14-likecoord: 166..254
score: 2.4