Lsi05G001490 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Heavy metal transport/detoxification superfamily protein
Location	chr05 : 2162808 .. 2163644 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATGTCGGTAAGTACTATAATCCTTCGCTTCAATTTTATCCAATGTCATTATCGTTCACTGAAATCTAGAAATTTAAACTGATAAGTTATAGCATATTATTTATAATTCGATGGCATATTTTCGATTTCGCAGATTATAGAGCTTTTGGTGCACATGGATTGTAATGGATGTGAAGGTCGGATTCGAAGAGCGATCTCCAAAATGGAAGGTAAGCGTACTACTACTACTTTCATCTTATGAGCAATACTTTGGTGCATGCAGCCTACGTTATATCCATCTCCATGCATCCTCTTCAATCACAAAAGAAAAAAAATATATTAAAAATATATCTTTTAAAATAAAATAAAAATCAACACATGAGAATTTGTGATTGTATAGTTAAGTGGAATACACAAAAATAGGTGCAGCTTAGGATGTACTCAAGTATTTTTATTTCATTGATAAAGAAAATGTTTAATGAGGTAAATTTTGTTTCTGAGCTAATAGAGAGAGTGATGTTACTAAAACAGGAGTAGATGGCTTGGAAATAGACATGGACAAACAGAAAGTTACTGTAACTGGATATGTAGAGGAAAGAAAAGTATTGAAGGTGGTGAGAGGAACGGGGCGAAAAGCTGAGCTATGGCCGTTCCCTTACGACAACGAATACTACCCGTACGCATCGCAATACTACGACGAATCGACATATGCCTCGACGTATAACTATTATAGGCATGGTTTCAATGAAGGCGTCCATGGATACTTTCCAGATCCTTTATATTCAACTGTCAGTGATAACACTGTTCATCTTTTTAGTGAAGATAATGTCCATGCTTATTGTAGTATTATGTGA

mRNA sequence

ATGCCATGTCGAGAGAGTGATGTTACTAAAACAGGAGTAGATGGCTTGGAAATAGACATGGACAAACAGAAAGTTACTGTAACTGGATATGTAGAGGAAAGAAAAGTATTGAAGGTGGTGAGAGGAACGGGGCGAAAAGCTGAGCTATGGCCGTTCCCTTACGACAACGAATACTACCCGTACGCATCGCAATACTACGACGAATCGACATATGCCTCGACGTATAACTATTATAGGCATGGTTTCAATGAAGGCGTCCATGGATACTTTCCAGATCCTTTATATTCAACTGTCAGTGATAACACTGTTCATCTTTTTAGTGAAGATAATGTCCATGCTTATTGTAGTATTATGTGA

Coding sequence (CDS)

ATGCCATGTCGAGAGAGTGATGTTACTAAAACAGGAGTAGATGGCTTGGAAATAGACATGGACAAACAGAAAGTTACTGTAACTGGATATGTAGAGGAAAGAAAAGTATTGAAGGTGGTGAGAGGAACGGGGCGAAAAGCTGAGCTATGGCCGTTCCCTTACGACAACGAATACTACCCGTACGCATCGCAATACTACGACGAATCGACATATGCCTCGACGTATAACTATTATAGGCATGGTTTCAATGAAGGCGTCCATGGATACTTTCCAGATCCTTTATATTCAACTGTCAGTGATAACACTGTTCATCTTTTTAGTGAAGATAATGTCCATGCTTATTGTAGTATTATGTGA

Protein sequence

MPCRESDVTKTGVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTYASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM

Homology

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BLAST of Lsi05G001490 vs. Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPF-PYDNEYYPYASQYYDEST 71
           GV  +E++  + ++TV G+V+  KVLK V+ TG+KAE WP+ P    YYP+A   YD+  
Sbjct: 52  GVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRA 111

Query: 72  YASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
            A         F          P  +   +N V LFS+DNVHA CSIM
Sbjct: 112 PAGHIRNPTQSF----------PTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of Lsi05G001490 vs. Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.0e-09
Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPF-PYDNEYYPYASQYYDEST 71
           GV  +E++    KVTV+GYVE +KVLK +  TG+KAE+WP+ PY+   YPYA   YD+  
Sbjct: 54  GVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKA 113

Query: 72  YASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
            A    Y R      +       L     ++ + LFS++N +A C++M
Sbjct: 114 PA---GYVRKSEQSQL-----QLLPGAPENHYISLFSDENPNA-CTVM 152

[Close]

BLAST of Lsi05G001490 vs. Swiss-Prot
Match: HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN=HIPP22 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTG-RKAELWPF-PYDNEYYPYASQYYDES 71
           G   +E++    KVTV+GYV+ +KVLK V+ TG +KAELWP+ PY    YPYA+  YD+ 
Sbjct: 55  GAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKR 114

Query: 72  TYASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
                      GF          P   +  D  + LFS++N +A C++M
Sbjct: 115 A--------PPGFVRKSEQAQAQP--GSTDDKLMSLFSDENPNA-CTVM 152

[Close]

BLAST of Lsi05G001490 vs. Swiss-Prot
Match: HIP25_ARATH (Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana GN=HIPP25 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-06
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVL-KVVRGTGRKAELWPF-PYDNEYYPYASQYYD 68
           G+  + I+ + QKVTV GYVE  KV+ +++  TG++AEL+PF PYD   +PYAS  YD
Sbjct: 51  GIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYD 108

[Close]

BLAST of Lsi05G001490 vs. TrEMBL
Match: A0A0A0L9G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G231930 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-53
Identity = 102/107 (95.33%), Postives = 105/107 (98.13%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GV  LEIDM+KQKVTVTGYVEERKVLK+VRGTGRKAELWPFPYD+EYYPYASQYYDESTY
Sbjct: 42  GVHSLEIDMNKQKVTVTGYVEERKVLKMVRGTGRKAELWPFPYDDEYYPYASQYYDESTY 101

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM
Sbjct: 102 ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 148

[Close]

BLAST of Lsi05G001490 vs. TrEMBL
Match: A0A061EZK6_THECC (Heavy metal transport/detoxification superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_025236 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.5e-47
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GVD LEIDMDKQKVTVTGY++ERKVLKVVR TGRKAELWPFPYD+EYYPYAS+Y DESTY
Sbjct: 42  GVDSLEIDMDKQKVTVTGYIDERKVLKVVRRTGRKAELWPFPYDSEYYPYASRYLDESTY 101

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           AS+YNYYRHG+NE VHGYFPD  YSTV D TVHLFS+DNVHAYC++M
Sbjct: 102 ASSYNYYRHGYNESVHGYFPDQAYSTVPDQTVHLFSDDNVHAYCNVM 148

[Close]

BLAST of Lsi05G001490 vs. TrEMBL
Match: M5VSE8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013392mg PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.5e-47
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GVD LEIDMDKQKVTVTGYV++RKVLKVVR TGRKAE WPFPYD EYYPYASQY DESTY
Sbjct: 19  GVDSLEIDMDKQKVTVTGYVDQRKVLKVVRRTGRKAEFWPFPYDTEYYPYASQYLDESTY 78

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           +S+YNYY HG NE VHGYFPDPLYSTV+D TVHLFS+DNVHAYC++M
Sbjct: 79  SSSYNYYMHGSNESVHGYFPDPLYSTVADQTVHLFSDDNVHAYCTLM 125

[Close]

BLAST of Lsi05G001490 vs. TrEMBL
Match: W9SW68_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027991 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.5e-47
Identity = 90/107 (84.11%), Postives = 97/107 (90.65%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GVD  EIDMDKQKVTVTGYV++RKVLK+VR TGRKAE WPFPYD+EYYPYASQY DESTY
Sbjct: 7   GVDSFEIDMDKQKVTVTGYVDKRKVLKMVRRTGRKAEFWPFPYDSEYYPYASQYLDESTY 66

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
            S+YNYYRHG+NEGVHGYFPD  YSTV D TVHLFS+DNVHAYCSIM
Sbjct: 67  TSSYNYYRHGYNEGVHGYFPDQAYSTVDDQTVHLFSDDNVHAYCSIM 113

[Close]

BLAST of Lsi05G001490 vs. TrEMBL
Match: B9RG30_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1438770 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-46
Identity = 92/118 (77.97%), Postives = 100/118 (84.75%), Query Frame = 1


Query: 1   MPCRESDVTKTGVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYP 60
           MPC    V   GVD LEIDMD+QKVTVTGYV++RKVLKVVR TGRKAE WPFPYD EYYP
Sbjct: 571 MPCLVHHVA--GVDSLEIDMDRQKVTVTGYVDQRKVLKVVRRTGRKAEFWPFPYDVEYYP 630

Query: 61  YASQYYDESTYASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           YA+QY DE+TY ++YNYYRHGFNE VHGYFPD  Y TV DNTVHLFSEDNVHAYC+IM
Sbjct: 631 YAAQYLDETTYTTSYNYYRHGFNESVHGYFPDQAYETVDDNTVHLFSEDNVHAYCTIM 686

[Close]

BLAST of Lsi05G001490 vs. TAIR10
Match: AT3G56891.1 (AT3G56891.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 9.4e-22
Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYD---NEYYPYASQYYDE 71
           GVD +EID+D+QKVTVTGYV+  +VLK+V+ TGR AE WPFPY+    +YY Y SQ+ ++
Sbjct: 42  GVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEYWPFPYNGYYGDYYTYPSQHLEQ 101

Query: 72  S--------TYASTYNYY-----RHGFNEGVHGYFP---DPLYSTVSDNTVHLFSEDNVH 119
           S        +Y+  Y++Y     ++  N  ++GY+P     +   + +N +HLFS+DN H
Sbjct: 102 SDQKIYQTISYSGKYDFYDVDDFQNTNNSTINGYYPSSSQKVQPNIDENALHLFSDDNAH 161

[Close]

BLAST of Lsi05G001490 vs. TAIR10
Match: AT2G18196.1 (AT2G18196.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 6.3e-18
Identity = 46/110 (41.82%), Postives = 71/110 (64.55%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDEST- 71
           GVD +E++++ ++VTV GYVE +KVLK VR  G++AE WP+P    Y+  +  Y+ ++T 
Sbjct: 72  GVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEFWPYPDMPRYFTSSDHYFKDTTR 131

Query: 72  -YASTYNYYRHGFN-EGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
            +  +YNYYRHG+N    HG     + +   D   + F++DNVHA CS+M
Sbjct: 132 EFRESYNYYRHGYNLSDRHGNI--HVTNRGDDKMSNFFNDDNVHA-CSLM 178

[Close]

BLAST of Lsi05G001490 vs. TAIR10
Match: AT1G06330.1 (AT1G06330.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15
Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQ----YYD 71
           GVD +EIDM +QKVTVTGY +++KVLK VR TGR+AELW  PY+ ++   +S     +Y+
Sbjct: 37  GVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAELWQLPYNPDHMGGSSSNGGYFYN 96

Query: 72  ES-----------TYASTYNYYRHGFNEGVH-GYFPDPLYSTV-SDNTVHLFSEDNVHAY 119
                           S+YNYY+HG++   +  Y   P+++++ S  T   FS++N +A 
Sbjct: 97  PQGCNGPINHAAPVPTSSYNYYKHGYDSNDYSSYRHHPVHASIFSHQTGSKFSDENPNA- 156

[Close]

BLAST of Lsi05G001490 vs. TAIR10
Match: AT1G29100.1 (AT1G29100.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.5e-14
Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRG-TGRKAELWPFPYDNEYYPYASQYYDE-- 71
           GV  ++ID+ +Q+VTVTG  E++KVLKV R  T R   LW +PY  E   Y  +Y+ +  
Sbjct: 23  GVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTKRDICLWSYPYHPESNGYNDRYFKKKF 82

Query: 72  ---------STYASTYNYYRHGFNEGVHGYFPDPLYS-TVSDNTVHLFSEDNVHAYCSIM 119
                        S+YNY++HG++   HGY+ +  YS  ++ +   +FSE+N H +CSIM
Sbjct: 83  RKRINMSVNGEKVSSYNYHKHGYHGHEHGYYQERPYSGLINPSASSMFSEENPH-FCSIM 141

[Close]

BLAST of Lsi05G001490 vs. TAIR10
Match: AT4G10465.1 (AT4G10465.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 3.2e-14
Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDEST- 71
           GVD +E+D +  +V V GYV+  KVLK VR  G++AE  P+P    Y+     Y+ + + 
Sbjct: 77  GVDSVEVDKELGRVRVVGYVDRNKVLKAVRRAGKRAEFSPYPEPPLYFTSTQNYFVDPSK 136

Query: 72  -YASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
            +  +YNYYRHG+N G   +   P+ S   D   ++F++DNV+A C +M
Sbjct: 137 EFKESYNYYRHGYN-GTEQHGNIPVGSRGDDRVSNMFNDDNVNA-CRLM 183

[Close]

BLAST of Lsi05G001490 vs. NCBI nr
Match: gi|659112036|ref|XP_008456034.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 3.0e-54
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GV  LEIDM+KQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY
Sbjct: 42  GVHSLEIDMNKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 101

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM
Sbjct: 102 ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 148

[Close]

BLAST of Lsi05G001490 vs. NCBI nr
Match: gi|449457031|ref|XP_004146252.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-53
Identity = 102/107 (95.33%), Postives = 105/107 (98.13%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GV  LEIDM+KQKVTVTGYVEERKVLK+VRGTGRKAELWPFPYD+EYYPYASQYYDESTY
Sbjct: 42  GVHSLEIDMNKQKVTVTGYVEERKVLKMVRGTGRKAELWPFPYDDEYYPYASQYYDESTY 101

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM
Sbjct: 102 ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 148

[Close]

BLAST of Lsi05G001490 vs. NCBI nr
Match: gi|645270862|ref|XP_008240650.1| (PREDICTED: copper transport protein ATX1 [Prunus mume])

HSP 1 Score: 199.1 bits (505), Expect = 4.2e-48
Identity = 92/107 (85.98%), Postives = 99/107 (92.52%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GVD LEIDMDKQKVTVTGYV++RKVLKVVR TGRKAE WPFPYD EYYPYASQY DESTY
Sbjct: 43  GVDSLEIDMDKQKVTVTGYVDQRKVLKVVRRTGRKAEFWPFPYDTEYYPYASQYLDESTY 102

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           +S+YNYY HGFNE VHGYFPDPLYSTVSD TVHLFS+DNVHAYC++M
Sbjct: 103 SSSYNYYMHGFNESVHGYFPDPLYSTVSDQTVHLFSDDNVHAYCTLM 149

[Close]

BLAST of Lsi05G001490 vs. NCBI nr
Match: gi|657951383|ref|XP_008352454.1| (PREDICTED: copper transport protein ATX1 [Malus domestica])

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-47
Identity = 89/107 (83.18%), Postives = 101/107 (94.39%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GVD LEIDMD QKVTVTGYV++RKVLKVVR TGR+AE WPFPYD+EYYPYASQY+DESTY
Sbjct: 43  GVDSLEIDMDTQKVTVTGYVDQRKVLKVVRRTGRRAEFWPFPYDSEYYPYASQYFDESTY 102

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           +S+YNYY HG+NEGVHGYFPD LYSTV+DNTVHLFS+DNVHAYC++M
Sbjct: 103 SSSYNYYMHGYNEGVHGYFPDQLYSTVADNTVHLFSDDNVHAYCTLM 149

[Close]

BLAST of Lsi05G001490 vs. NCBI nr
Match: gi|590638340|ref|XP_007029365.1| (Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 196.1 bits (497), Expect = 3.6e-47
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 1


Query: 12  GVDGLEIDMDKQKVTVTGYVEERKVLKVVRGTGRKAELWPFPYDNEYYPYASQYYDESTY 71
           GVD LEIDMDKQKVTVTGY++ERKVLKVVR TGRKAELWPFPYD+EYYPYAS+Y DESTY
Sbjct: 42  GVDSLEIDMDKQKVTVTGYIDERKVLKVVRRTGRKAELWPFPYDSEYYPYASRYLDESTY 101

Query: 72  ASTYNYYRHGFNEGVHGYFPDPLYSTVSDNTVHLFSEDNVHAYCSIM 119
           AS+YNYYRHG+NE VHGYFPD  YSTV D TVHLFS+DNVHAYC++M
Sbjct: 102 ASSYNYYRHGYNESVHGYFPDQAYSTVPDQTVHLFSDDNVHAYCNVM 148

The following BLAST results are available for this feature:

BLAST of Lsi05G001490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HIP21_ARATH	1.3e-12	39.81	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN...	[more]
HIP20_ARATH	5.0e-09	37.96	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN...	[more]
HIP22_ARATH	2.5e-08	37.61	Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN...	[more]
HIP25_ARATH	1.0e-06	50.00	Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana GN...	[more]

BLAST of Lsi05G001490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9G7_CUCSA	1.8e-53	95.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G231930 PE=4 SV=1	[more]
A0A061EZK6_THECC	2.5e-47	84.11	Heavy metal transport/detoxification superfamily protein isoform 1 OS=Theobroma ...	[more]
M5VSE8_PRUPE	5.5e-47	84.11	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013392mg PE=4 SV=1	[more]
W9SW68_9ROSA	5.5e-47	84.11	Uncharacterized protein OS=Morus notabilis GN=L484_027991 PE=4 SV=1	[more]
B9RG30_RICCO	1.2e-46	77.97	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]

BLAST of Lsi05G001490 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56891.1	9.4e-22	43.65	Heavy metal transport/detoxification superfamily protein	[more]
AT2G18196.1	6.3e-18	41.82	Heavy metal transport/detoxification superfamily protein	[more]
AT1G06330.1	1.0e-15	41.13	Heavy metal transport/detoxification superfamily protein	[more]
AT1G29100.1	2.5e-14	38.33	Heavy metal transport/detoxification superfamily protein	[more]
AT4G10465.1	3.2e-14	38.53	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Lsi05G001490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112036\|ref\|XP_008456034.1\|	3.0e-54	97.20	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis melo]	[more]
gi\|449457031\|ref\|XP_004146252.1\|	2.6e-53	95.33	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis sativu...	[more]
gi\|645270862\|ref\|XP_008240650.1\|	4.2e-48	85.98	PREDICTED: copper transport protein ATX1 [Prunus mume]	[more]
gi\|657951383\|ref\|XP_008352454.1\|	2.1e-47	83.18	PREDICTED: copper transport protein ATX1 [Malus domestica]	[more]
gi\|590638340\|ref\|XP_007029365.1\|	3.6e-47	84.11	Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma ca...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046916	cellular transition metal ion homeostasis
biological_process	GO:0030001	metal ion transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046914	transition metal ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001490.1	Lsi05G001490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 11..51 score: 4.0
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 11..51 score: 6.
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 12..117 score: 4.6
None	No IPR available	PANTHER	PTHR22814:SF85	METAL ION BINDING PROTEIN	coord: 12..117 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001490	Csa3G231930	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001490	CSPI03G19320	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001490	Cucsa.032650	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001490	CmaCh16G003940	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G001490	CmoCh16G004270	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G001490	Cla004301	Watermelon (97103) v1	lsiwmB361
Lsi05G001490	MELO3C019416	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001490	ClCG05G009390	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001490	MELO3C019416.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001490	Cla97C05G091740	Watermelon (97103) v2	lsiwmbB329
Lsi05G001490	Bhi01G001176	Wax gourd	lsiwgoB431
Lsi05G001490	Cp4.1LG14g03870	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G001490	CsGy3G019210	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001490	Carg11326	Silver-seed gourd	carlsiB595
Lsi05G001490	CsaV3_3G019390	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001490	Silver-seed gourd	carlsiB039
Lsi05G001490	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G001490	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G001490	Cucurbita pepo (Zucchini)	cpelsiB369