Lsi04G009950 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G009950
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Vacuolar iron transporter-like protein
Location	chr04 : 10880452 .. 10890703 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCAACCACGCCTTTCACCCCTTCGCATTCCATTTTTTTATTATTTATTTTTCATATTTTCATTATTTCTACTGAACCTCCACTTTCTCAGTACATCAATGGCGGACGACGCTCCACCAATCCGCCTCGACCCTCACAAGCAATCTCTTCTCAACCGCCACACCGAGAACCACTTCACCGCCGGTGAGATCGTTCGCGATATCATAATCGGCGTCTCCGACGGCCTCACCGTTCCTTTCGCCCTCGCCGCTGGACTTTCCGGCGCCAACGCCTCTTCTTCCATCGTTCTCACCGCCGGAATCGCTGAAGTGGCTGCCGGCGCTATCTCGATGGGACTCGGCGGGTGCGTTTCTCTCTGCCCTTGCCTTTTGGTGAAGCATTGAATCGTCGTCCTTCATTTAGGGATTTTTATGTTGTGATTTTGTGTAGATATCTTGCGGCGAAGAGCGAAGCGGATCATTATATGAGAGAACTGCGGAGAGAGCAAGAAGAAATCGTCACAGTTCCCGATACTGGTACCCATTTCATCTACTTTTTTTTCCTATCTTTTTTTATAGTTTGATTTTAGATTTTTTAGATGAAATTAGTATGAATATGAACAACTTTTCTTATATGGCAACTTAATTTTAGGAATAAGATTTTTTTTATTAAATATGGCTTTTCGGTAGTGGATTCAGTTTTCGGTTTTGTTAGTTTTGGATTCAACTAAGAATCAAACCAAACTAATTCTTTTTATAAAAAGAAAACTAAAGTGATGTCTAATAAAAAACAAAATCAATAAATTCGTTTTTATTTGATTCGATTTATTTTTGGTTTAGATCTCTTCATTTGATTCTCAATTTTTGGTATTTTCATTTTTTTAAAATTTTTATTCTTAATTGCTTATTTTTACTAATTTTAAATTAAAATTAAAATACTTAGAGTTTATTTTTAAATGTGCCTTTTTAACTCTCCACAATTGTAAGGATGGTTTAAAATATTTTTGAAGTATTTATTTTTATTATTTTAAATAATTGTGATTCCTTATCAAAAGAGAATTCTTAAAAATTAAAAAATAAGTGAAACTATTTAAAAAAAAACAAAATTTTTATATAGTTGTGAAAGATGGTGATAGAAGTTTATTAGGGTCTATCAGGATAGAAAATCTATTCTATCTATTTTTTTTTTTTTTGTTATTTTCTATAAATAAGTTGACATTTTTTCTACTTGTGGAAATTTCTCTATAAAAAACCTCTTCCCTCATTTCAAAATGCTATATAATTATTTAAAATAATAAAGAAATTATTCTAGGTATTTTTAAACATATTTTTAAGATACATTTTAAAAATTCAAAGTTGAATTCAAACACGCATTTTTTCAAAATTCTGGACTAGGAAGATAATTTTTCATTTTCTTTTAAATATTTGTTTTAAGCTTAAAATTATATATAAAAAAGTTGCTTTGACAATATTTCTAATATTTAAAAAAGAGTTGTAATATTATTTTTAATCTTTTTATTGTTTCAAAACTACCATTAAATTGATAAATCTTTTAAAATTTCAACTAGAACTTGAGTATGGTTAAATTTAAAATTTATAATCTTGGCAAAGGTGAATTTCCATACACATCATGTAAAACAAAATTCAATTCTTTACTAAAATTTCTAGAAGATTGATAAAAAGAGACAAAGTCTCAACAAATGACTAAGAGGTCATGGGTTCAATCCATGGTGGCCACCAAATTAATTTCCTACGAGTTTCCTTGACATCCAAATGTTGTAGGGTCAAGCGGGTGTCCCGTGAGATTAGTCGAGGTGCGCTTAAGCTAGCTCGAACACTCACGGATATATAAAAAAAAATGTAAAACAAAATTCAATTCTTTATGAAAATTTCTAGAAGATTGATTCAACAAAACTATATGAATAAAAATGAGTACTATTGATACTAAAATATAACTAATAAATTTAGCCAAAAAAAAAAAAAGAATTTAATTTGTTTTGAAGGAGATTAATATTAATATGTTATAATGAATAATGGTACAAATGCAGAAGCGGCAGAAATAGCAGAGATATTGGCGGAGTATGGGATCGAACCACATGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAAGCTTGGTTGGATTTCATGATGAAGTAAGTTCATTCTCTCTCCTTCTCCTTTACTTCCATTTATACCATTTTTTTTCCTATCATAATCGTTTATTTTTTTATTTTTTTTTTTATTATTGTTATTATTTAGAATAGCTAAGACATTGTTTAGTAATCATTTTCTTCTTGTTTGATAATCTTTTTGTTTTTGAAAATTATGCTTGTTGTAAAGGGTTGTCCAAGTCAAGGTCCAAGCTCAAATGCGTCCTAAAGCTTGCATAGCATCCACACGTCCCAAAGGGAAAGTCAAACCCACGGGTCTTGGATCGACCAGTTGAGTTTGCCCCATTTTGTCAAAAAGTAAATGGTCGAGCCGAGACTGACATTGGCAATCTGCAACCTCTAGTGCCACACCTACTCTGACACCGTCGATATTGCACATACCCCAAACGAGAGTCAGACAATGAACCTCATAAATAGCCCCACACCACCAACCCCAAAGGATAAGCAATTCTCTTTGTGCTCAGCCGAGCTAAATTCTTAATGTACTAACTTAGGCATCAGAGTGACATGACTTGGCACCACATCGGTGCGAGTACTCTCATAGGTCTGCTCCAACTCTAGCGATGTGTTTGGACCAAAGAAGAGGGTTGGAGGAGTGAAGATAGCTTGGACGAGATATTTGTGCCAACATTTGGCACCGTTTGTGGGGACTACATGTCTAAGCAAAGCTCGACTGCATAGATGGCTCGGAGGCCGGCGATCGAATAAGAAAACCCCATTGAGGAGGATGAATTCTCCATGCCCCATGTAGACCACGACCAGAGCTGAGTCGACCGAAAGGCATCTCAATCCCCCGGTGGAGGGTACACCTGTGAGGCAAAACCTTCCTGCCACCCACCTGTTCATGTAATGGTCAGAGGGTTTCGTGTTCCTCGATGAATTGGTCGATGAAGGCCAACTCCCAAAAAGAGCTGAACGCTTCAGCGAGCACCTTCCAATACCAGCTCGGGCTGGTCCCATGAGGTACATGTGGAAGGCTCAGTAGCATACGACTTCAAGAACCCCATGTAGCTCCATGGTTAATTGGTATGTCTCGACATGCTTGATTGGGTCAGCGCTATCATTGTATTCTTTGATAATTGGGAGGTTGAAGCACTTTAGGAGCTCTTCTGCCATGACCTTGCTTGAGAATGGGGCATTGTCTTTCTTCAAGAGCTTATTGGTGAGCTCTACGTACTCGAGCGAATCGTCACTTTTCTTGGCCATTTTGGCCTCCACCGCTGACTGATTTAATCAGGGATTTTGGAGATGGGGTCGTCTACTAGTTGACTCATTCAGGAAATTGCGCACGTTAATTGCCTCTAGGTGGCTGGTGTTGGTGGAGGGTAGGTCCAGCCGCAACCCTTCCAATGTTGGTCTTTGGGACCTCCATGAGAGGGTATGCTCTTGTGTCTTGGCCTTCGCTTTTCCCTTGTGCGAGTTGTGTATTAGATTTGAGTTGATGGCCCTCGTCCCTCGTGTTGGCATGACATTGTCTTTGTCATGGCCTCCATCTGGGACATGCACTTTGCCATCATCACTTGAAAGTTAGAGAAGACGTTCGAGACTGTGTTTGTTCTTCCAGCTCTAGGGGTTTCCTTGGGCCTTTTTGCTTCTTAGCATTAGGGCGACAGGAAAATGTTTTGCCTCCCGGGTATACCCTCCACTGGGAGTTGATTCCCCCTTCGATCGATTCAGTTCCAATCGTGATTTGCTAGGGGTCATGGAGGATTTCTTCCTTGTTAGAATTTTCTCGTTCGATCGTCAATCTCGGAGCGACCCACGTTGTCGGGCTTCGCTTGGACATGTCGTCCCCACAAACTACGTCAAATGATGGTGTGGGTATCTTGTTTAGGCCCTCTCCTCTAGTCCAGACACATCGTTGGAGCTGAAGCTGACTTGCAAGAGTACTCACACTGGTGTTATGTTGAGTCGAGTACACTCCAATGTCTAAGTACATGAAGTATTTAACTCGGTCGAGTACAAAGAAAATTGCTTACCCATTGAGGTTGGTGGTTTGGATGCTATTTATAAGGTATATTCTCTAACTCTCGCTTTGTATAATATCGATGATGTTAGAGTAGGCGTGACACTCGAGGCTATAGAGTGCTAGTGCTAAGCTAAGCTTGACCAAATCTAAAATTTGAAGATTTAACTTTCCTTGAGGACGGTGGATCCCTATGTACGCTCTAGAGCGCTCGTGAGCTTGGGCTTTACCTCGAGCTTCCCTCGACAATATATAAATACATAAGTAACATTTATTGGTTTTCTATCATTAAGTTTGGTATTTTCCTTGAAAATCTAAGATAAAGACGTGAATAGTTTTCTATGACAATATTCTTAGGCGGTGAGTTTATCTCGATCCCACAAATTTGTCTCATATAAAAAGCAAGGGCTAGCTTCGTAAATAGCAATCAATAATCCATTTGAAGTTTCCCAACCTTTTCTAATGAACATGTTGACTGCTCCCATCCAAGAAAGATAATTGACATCACAATTTCTTTTTTTTTTTTTCTAAAAAAATGTTTGTGAACTTATAAAATGAGCTCTTTTCAAATTTAGAAAAATAAGTCAAATTATTTACAAATATAGAAAAATTTTACAGTCTATTACTGATAGATCGCGATAGAATTCTATCGCTTTCTATCGCTCAGGCGATAGAATTTATTTGCTTGAGCGATAGAAAGCGATAGAATTCTATGCGGTCTATCACTGATAGAATGAAATTTTTTTATATATGTAAATAGTAGCAAATAAATTCTATCGCGGTCTATCATTGATAGAATGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTGTTTACAGTAATTTCCCTTATAAAATTGTGTTATAATTATTAAACTTTTAATGGTACATCTTATAGGTTAAACTTTAAAAATGTTAGGTTTTTTAACTTCCAAATATATGAATAGTTTCTTATTTGGAAAAAAAAGTTATAATATATATAAAATGTCATTGAACTTTGCACTTTATGTAAAAAAAAATCGTTGAAACTTTAAAAAAGTTCAAATATACTCGTAAACTCTAAAAAAAAGTTTAAAAATACACCTACTTTTAATTTTGGACGAAAACCGTTAGTATTTTGTTTCAAAAATACCCTTGAACTTTCTAAAGTATCAAAAATACCTTTAAACTTAAAAAAATGTTTAAAAATATCCTTATTATTAATATATGAACAGAAATCTTTAATATCTCATTACAAAAATAACTTTACATTTTTTTTTAAAAAAAAAAAAGTTTAAAATGCTCTTACCGTTAGTATAATGATCAATTTGTTTGTAATTTTCTTGCATTAAAAAAGAACCAATTTTAAAATAAATTATATAGATATCCTTATTATTTTTTTCATATAAAATACTATTATTTTCTCATATTTATACCATTCTTACACCAATTTTTTCAGCAATCAAAATAAAAACCAACTTTAAATTAAAATATAAAATCTCATAAAATTTTAAAATCAAAATCTCCCCTTAAAATATACCAAAACGATAAATAGCCAAATAAAAAAATATTTGACTATTAACACACACTCAACTACTAATTTACAATCTTGTTAAGACATTTAAGGCCTAAGACCCCTTTGTGCTTTCATTATTATTTTTCTTCTTGTTATAGTTTGTATACTTTAACTGAAGTGAACAATTTTATGTCAAATAGTTAATAAAAAGTGGAGGAGTAGAAGGGTGTTGAAGAAGAGAGAGGAGAAAAAAGAGGGAAAATAGAGAAGTAAGAGTGTATTAACAATTTTTGTTCATATACTAACAGTAAATGCATTTTTTAACTTTATTTTTTTAAGTTTAAGGGTATTTTTAAAATTTTTGAAAGTCCTGACACAAAACACAATGGTTTCATCCAAAATTAACGGTAAAGGTATTTCTGAACTCTTTGGAAGTTTAAGGGTATTTTTGAAACTTTTGAAAATTCAAGAGTATGTTTGACATAAATTTACAAAGTTTAGGGGTATTTTGTATAATTTAGCAAAAAAAATCAATTATGTATTTGATAGACGTTATAAATATTTGAATTAGATATATATATCCATAGATTACATATCTTCAAATATTATTTTCAAATATCTTCCCCATTATCTTCTCCATATATTTATCTTTTCTATATCTGGTAAACTTTACAAGCAGTGGTCATTGAGACTTTTGAGATATACAATTTGAATAGAGAATACATTCAGTCTTTACTTTATCTTCTCCTTACTTTGTTCTTTATTCTCTTATTTTACAACAATAGATTCGCGATATATTTATAAAAAACTAATTGGGATATTAGATATAAAATTTAAATTTATATCTAATATCTCTCAACTTTAAATTATTTATTTTGTTTAGTAGGTCTGTGATTTTTTATTTATTTATTGTTTTTTAGTATCAAATAGGTCAAGCATCTATTAAACAACAAAATTGAAAATTTAGAAATTTATTGGACATAAAGTTAAAAGTTAAGTGTCTATTTGAGACTTTGTAAAGTTTAAGAGATTAGAGATCTATTAAATACAATTGAAGGTTTATGAGGATACCTTTAAAACTTGAGATTAAATAGACAAAAATTTTAAAGTTTAGAAACCTTATTTTTTAACACATTTTTTTCTAACAGTTAATTGTTGATCGAGCCATTCTTATTAAATATCTGATTTAGGATTTAAATAAATAAACAAGTTCTAGATTTGTATGGTTATATTTAGATTATATTCAGAAGAGTGAGTCATGTCACTGAGGTCTGGTTTAGTTTGTAGATTTATGGTTTATAAAATCTTGTAGGCAGTCTTATTAAAAGTGGGTTTTAGAAATTTAATCTCATATTTATTTAGTTTGTAGAATTAGCCCTACATGTAGACTGAGACAAATTAATTCACATATTAAATGTTATGGGAATAATCTTCCAAAGGCCCCTAGGACTAGGCTCATAGGGCCCATCACATCTACACATCCGTAAAAGGAAAGAGATGTCTTGTAGCTCGTCACGATTGAGCCAAGGAGACTCCCTATTACATGAAATTGGTAGACAAGTCCCGAGACAACTGATAGGTTGCTAGACCTGCAGGTGTCTACGGGTGGAGCGGGGCCGGGAATGATTTTTCCGCTCCCCATTTCATTTTCCGTCCCTGCTAAAATGAATTTTTTTTTAATTAAATGGTTAGTTTTATATGATTAGTTTCACATGAATAATTAGAATTTAAAAAAAATTATTCAAAATTTTCAAATTAAAAAAAATAATTATCTATCAAATTATTCATATATATAATCTAAATTTATTAGAATTCAAACCTATTTTTTTTACACTAATTCAAACATATCCATTATTTTGACCATTAAACAATAAATCTTGAAAATTATAGAAAAAATGTTAAACTATTTACATAAAATAGTAAAAAAAAAAAAAAAGCACGGATAACATTGATAAACTTCTATCAGCATCTATCGGTGATACACTTCTATCCTTTCTATCATTCTATCAACGTTTATCACAACTATCTAAAAAATTTGTTATTTTGTGTAAATATTTTCCCTTATTTTTCTATTTTTAAAAATTCTTCATATTTATATAATAAAAATAAATAGCATAACATTAAATTATTATTAATAAATATAAGAAAAAAGCCTAACGGCGCGGGGCGGGGAATGCATTCCCCTCCCCATCCTCGTTTAGCTTTTGGGGAATTTTTTCCCTACTCCCTCCCACATTCTCCCTTAAATAGGGAATCCCCTCGGGGCCTGTTCCCGTTGGAAAAGTGAACATCTTCGATAGAGAAAGTGGACATCTCTTGCTAAACATTCCCTGTCCCCATTTTGGTTTCGAGAAATTTTTTTCTCCACTCCCTCCCCCATTTTCCGCTTAAATAAGAAATTCTCGTGGCCCTCGTCCCTGTGGAAAAAGTAAACATCTTTGATAGAAAAAGTGGACATCTCTTTCTAGACCTGCTTCAAGTGCTCTCACTAATAGTGCAAAGCTCCCAACATAGGTCCCAAGGGAGCAAGATGCCTTTGGCGCATTTTTTAAGCTCGGCCATGCCTTCATTGACCAATTCATTGCCATGGACGCCCAACTTTTCATTATTACGAGACGTAGTGTGAGTATGTGACTTGCTTAGAAGTCGAGGTGCTGAAAATTGACGTCTACTTCGATGTCATCATTTGCTCGGTGATGGTGGCAGGCCTTACCCACCAGGGGCTTCTACGACCCTTCACTAAAGCTCGGTAACATCATATTTTGAGCTCTTGGCCTGAGCACAAAAGTATATTTTTTGCACTCGAATTTGTTACCTAATCTTTCCTTAATATTATATATCTAATTTTTTTCAAATTTCTCTATTCCTAATTCAAATTTTCAATTCAATCTTTGATTCCCACAAACTCATTCCAATTTTCCTATTTCAATATTCTCAAATCTTATGTAATCTTTCTCAAATATTATATGTATACTCGTTTTAAAATTCCCCTATTTCAACATCCTTTTTCATAGGAAAATCGAAAAGAGTTGAAGAGGGAATAGAATTTGGATTAGGAATAAAAAATTTGAAGAAAATTATATACATAATATTTGGAGAGATTGCGTACAAATTAATAGTCCGTCATGGTCTTTGTCTTGGTCAAGATTCCAAAAAAAAAAAAAAATTGTTAGATTTATGGTTGTATGTAAATTTATGGTTGTAGGCAGTCTTATTATTTAAAATTAGTCCAATTTTTATTTTGGTCTCGATATCAATCCTGGCCAAGATGTATCGAGATGAGCCATTAAAATAATTGGCCAAAAAGAGTACTTTGTTAAGGGTGAAAAACTTTGAGTGTTATTTATGACAATTTCTGATAGAATTTCTGATTATGTATTTGACAGACAATCTGAAAATTGTTTTAAGATTCCGAGATCTAAACAATACAAATTCTGAAAACAACATTTTTAGAATAGTGTATCTAGATTTAAAATGCAAAATCATATTAAAAAAGATAAAAAAAAACATTTAGAAATATAGTATTTCATGTAATAAACTCAATTAATTTTTAAAAATGAATTAGTATTTCATGTTCCAATAAGCCTTGGTCAAACTTAAAAGACTCACAAACAACATTTTATCGGTCTATTTTTTTAATTCAACAACACCAGAATGGAAGATCAAACTATTGACCTTCGTGATGGTAATCAGTATCTTTGTCCATTGAATTATGCTCAAATTCTTTAGAAAAAGAATTAGCAAAACGTAATTTTGCTACCTTTGGATACATAGATAGGTGTAATGGGATAGGTGTAATGGTAAACCACATCATTTTGTAATTGTCAATGTGAATTAATTCTTTCTACATTTAAATTTTCAGTTTTTCTAATTTTTATGTTTCATGTGCTACAATTTTCATACTTATCATACCTATGGAAATTATTCAATTTTTAAGTGTAACCAGTAAAAGCAACCTAATTTACCTCCTTAAAACCCCTATTTACATTAAATATAAGCAGTAGTAGTAGAAACAATGAACAATTTGAGTTTGGAGCCTAGTAAGTATTATTGAGGATGAGTACACTGTTAAACCAAACAGAATAATTTCAACATTTATTCCTCTGATTTAATGCTTCTACTGTTTATGTTGGTGATGTAGGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGAGGACTGGTGCCCCTCATTCCTTACATGTTTATTTCAAATGTGACGAGAGCTGTGACAGCCTCGGTTGCATTGACATTAGTAGCGTTGCTCGTGTTCGGGTATGCAAAGGGTTACTTCACAGGCAATAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATCGGAGCTGTTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGAACTAACCAACCCCCTATGTAGGCCACATGTTTAGTCTAATATCATGAGATTATTCTACAACTTTCATTAGTTTTCTCAGTTTAGGTCCAGAAATGAACATTTGATGTGGTTTTTAAAGCATTTAGTCATATGTGCAGAATTCAATTTTCTATGAGCAACAAATATGGTTGAAACATCTTTTCTAA

mRNA sequence

ACGCAACCACGCCTTTCACCCCTTCGCATTCCATTTTTTTATTATTTATTTTTCATATTTTCATTATTTCTACTGAACCTCCACTTTCTCAGTACATCAATGGCGGACGACGCTCCACCAATCCGCCTCGACCCTCACAAGCAATCTCTTCTCAACCGCCACACCGAGAACCACTTCACCGCCGGTGAGATCGTTCGCGATATCATAATCGGCGTCTCCGACGGCCTCACCGTTCCTTTCGCCCTCGCCGCTGGACTTTCCGGCGCCAACGCCTCTTCTTCCATCGTTCTCACCGCCGGAATCGCTGAAGTGGCTGCCGGCGCTATCTCGATGGGACTCGGCGGATATCTTGCGGCGAAGAGCGAAGCGGATCATTATATGAGAGAACTGCGGAGAGAGCAAGAAGAAATCGTCACAGTTCCCGATACTGAAGCGGCAGAAATAGCAGAGATATTGGCGGAGTATGGGATCGAACCACATGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAAGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGAGGACTGGTGCCCCTCATTCCTTACATGTTTATTTCAAATGTGACGAGAGCTGTGACAGCCTCGGTTGCATTGACATTAGTAGCGTTGCTCGTGTTCGGGTATGCAAAGGGTTACTTCACAGGCAATAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATCGGAGCTGTTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGAACTAACCAACCCCCTATGTAGGCCACATGTTTAGTCTAATATCATGAGATTATTCTACAACTTTCATTAGTTTTCTCAGTTTAGGTCCAGAAATGAACATTTGATGTGGTTTTTAAAGCATTTAGTCATATGTGCAGAATTCAATTTTCTATGAGCAACAAATATGGTTGAAACATCTTTTCTAA

Coding sequence (CDS)

ATGGCGGACGACGCTCCACCAATCCGCCTCGACCCTCACAAGCAATCTCTTCTCAACCGCCACACCGAGAACCACTTCACCGCCGGTGAGATCGTTCGCGATATCATAATCGGCGTCTCCGACGGCCTCACCGTTCCTTTCGCCCTCGCCGCTGGACTTTCCGGCGCCAACGCCTCTTCTTCCATCGTTCTCACCGCCGGAATCGCTGAAGTGGCTGCCGGCGCTATCTCGATGGGACTCGGCGGATATCTTGCGGCGAAGAGCGAAGCGGATCATTATATGAGAGAACTGCGGAGAGAGCAAGAAGAAATCGTCACAGTTCCCGATACTGAAGCGGCAGAAATAGCAGAGATATTGGCGGAGTATGGGATCGAACCACATGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAAGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGAGGACTGGTGCCCCTCATTCCTTACATGTTTATTTCAAATGTGACGAGAGCTGTGACAGCCTCGGTTGCATTGACATTAGTAGCGTTGCTCGTGTTCGGGTATGCAAAGGGTTACTTCACAGGCAATAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATCGGAGCTGTTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGA

Protein sequence

MADDAPPIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMAKAIQQ

Homology

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BLAST of Lsi04G009950 vs. Swiss-Prot
Match: VIT1_ARATH (Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-102
Identity = 190/244 (77.87%), Postives = 215/244 (88.11%), Query Frame = 1


Query: 3   DDAPPIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSI 62
           D    I ++P KQ+LL+ HTE HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSI
Sbjct: 6   DKITRISIEPEKQTLLDHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSI 65

Query: 63  VLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEY 122
           VLTAGIAEVAAGAISMGLGGYLAAKSE DHY RE++REQEEIV VP+TEAAE+AEILA+Y
Sbjct: 66  VLTAGIAEVAAGAISMGLGGYLAAKSEEDHYAREMKREQEEIVAVPETEAAEVAEILAQY 125

Query: 123 GIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLI 182
           GIEPHEY PVVNALRK PQAWLDFMM+FELGLEKPDP+RALQSAFTIA+AY+LGG +PL+
Sbjct: 126 GIEPHEYSPVVNALRKNPQAWLDFMMRFELGLEKPDPKRALQSAFTIAIAYVLGGFIPLL 185

Query: 183 PYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMA 242
           PYM I +   AV ASV +TL AL +FGYAKG+FTG+KP +SA +T  IGA+ASAAAF +A
Sbjct: 186 PYMLIPHAMDAVVASVVITLFALFIFGYAKGHFTGSKPLRSAFETAFIGAIASAAAFCLA 245

Query: 243 KAIQ 247
           K +Q
Sbjct: 246 KVVQ 249

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BLAST of Lsi04G009950 vs. Swiss-Prot
Match: VIT11_ORYSJ (Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.3e-96
Identity = 176/240 (73.33%), Postives = 209/240 (87.08%), Query Frame = 1


Query: 7   PIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTA 66
           P+  D       + H E HFT+GE+VRD+I+GVSDGLTVPFALAAGLSGA+A SS+VLTA
Sbjct: 11  PLLADKAASHSHHHHPERHFTSGEVVRDVIMGVSDGLTVPFALAAGLSGASAPSSLVLTA 70

Query: 67  GIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEYGIEP 126
           G+AEVAAGAISMGLGGYLAAKSEADHY RE++REQEEI+ VPDTEAAEI EI+++YG+EP
Sbjct: 71  GLAEVAAGAISMGLGGYLAAKSEADHYQREMKREQEEIIAVPDTEAAEIGEIMSQYGLEP 130

Query: 127 HEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMF 186
           HEYGPVV+ LR+ PQAWLDFMM+FELGLEKPDP+RA+QSA TIAL+Y++GGLVPL+PYMF
Sbjct: 131 HEYGPVVDGLRRNPQAWLDFMMRFELGLEKPDPKRAIQSALTIALSYVIGGLVPLLPYMF 190

Query: 187 ISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMAKAIQ 246
           IS    A+  SV +TLVALL FGY KG FTGN+PF SA+QT +IGA+ASAAA+GMAKA+Q
Sbjct: 191 ISTAQNAMLTSVGVTLVALLFFGYIKGRFTGNRPFLSAVQTAIIGALASAAAYGMAKAVQ 250

[Close]

BLAST of Lsi04G009950 vs. Swiss-Prot
Match: VIT12_ORYSJ (Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=2)

HSP 1 Score: 352.1 bits (902), Expect = 5.1e-96
Identity = 183/237 (77.22%), Postives = 208/237 (87.76%), Query Frame = 1


Query: 11  DPHKQS-LLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIA 70
           D  KQ  LL+ HTE HFTAGE+VRDIIIGVSDGLTVPFALAAGLSGANA S++VLTAG+A
Sbjct: 8   DEEKQRLLLDEHTEKHFTAGEVVRDIIIGVSDGLTVPFALAAGLSGANAPSALVLTAGLA 67

Query: 71  EVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEYGIEPHEY 130
           EVAAGAISMGLGGYLAAKS+ADHY REL+REQEEI TVPDTEAAEIA+IL++YG+ P EY
Sbjct: 68  EVAAGAISMGLGGYLAAKSDADHYHRELQREQEEIDTVPDTEAAEIADILSQYGLGPEEY 127

Query: 131 GPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFISN 190
           GPVVN+LR  P+AWL+FMMKFELGLEKP+PRRAL SA TIALAY++GGLVPL+PYMF+  
Sbjct: 128 GPVVNSLRSNPKAWLEFMMKFELGLEKPEPRRALMSAGTIALAYVVGGLVPLLPYMFVPT 187

Query: 191 VTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMAKAIQ 247
             RA+  SV +TL ALL FGY KG FTGN+PF SA QT +IGA+ASAAAFGMAKA+Q
Sbjct: 188 ADRAMATSVVVTLAALLFFGYVKGRFTGNRPFISAFQTAVIGALASAAAFGMAKAVQ 244

[Close]

BLAST of Lsi04G009950 vs. Swiss-Prot
Match: CCC1_YEAST (Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCC1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.2e-34
Identity = 87/223 (39.01%), Postives = 133/223 (59.64%), Query Frame = 1


Query: 31  IVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEA 90
           ++ D+IIG+SDGLTVPFAL AGLS     + +V+T G AE+ +GAISMGLGGYL AKSE+
Sbjct: 100 VISDLIIGLSDGLTVPFALTAGLSSLG-DAKLVITGGFAELISGAISMGLGGYLGAKSES 159

Query: 91  DHYMRELRREQEEIVTVPDTEAAEIAEILAEYG--IEPHEYGPVVNALRKRPQAWLDFMM 150
           D+Y  E+++E+ +     +    EI +IL E             +  L++ P+  +DF++
Sbjct: 160 DYYHAEVKKEKRKFYDNSNLINREIEDILLEINPNFSDETIVSFIKDLQRTPELMVDFII 219

Query: 151 KFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFISNVTRAVTASVALTLVALLVF 210
           ++  GL++P   R L SA TI   Y+LGGLVPL+PY F+S+V   +  S+ + +V L  F
Sbjct: 220 RYGRGLDEPAENRELISAVTIGGGYLLGGLVPLVPYFFVSDVGTGLIYSIIVMVVTLFWF 279

Query: 211 GYAKGYF------TGNKPFKSAIQTTLIGAVASAAAFGMAKAI 246
           GY K         + +K     ++  ++G VA+ AA+   K +
Sbjct: 280 GYVKTKLSMGSGSSTSKKVTEGVEMVVVGGVAAGAAWFFVKLL 321

[Close]

BLAST of Lsi04G009950 vs. Swiss-Prot
Match: PCL1_SCHPO (Fe(2+)/Mn(2+) transporter pcl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pcl1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 1


Query: 32  VRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEAD 91
           +R  ++G +DG+     L  G+  ANA   ++L  G+A + +GA+SM +G Y++  S+AD
Sbjct: 21  LRASVLGANDGILSLSGLLVGVVAANADIKVILITGVAGLMSGALSMAVGEYVSVSSQAD 80

Query: 92  HYMRELRREQEEIVTVPDTEAAEIAEILAEYGIEPHEYGPVVNALRKRPQAWLDFMMKFE 151
               +L+ E+ E+    D E  E+A I    G++  E    V A++      L+   + E
Sbjct: 81  LEDADLQLERREMDADWDAEVDELAAIYRGRGLD-EELSRTV-AVQLMEYNALEAHARDE 140

Query: 152 LGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFISNVTRAVTASVALTLVALLVFGYA 211
           LG+      +   +A + A ++ +GG+ PL+  +       ++   +A T+  L + G+ 
Sbjct: 141 LGINIHTTAKPTLAALSSAASFSVGGIFPLLTSLITPLEYLSLVLPIA-TMFFLGMLGFV 200

Query: 212 KGYFTGNKPFKSAIQTTLIGAVASAA 238
             +  G K  ++ ++  ++G +A AA
Sbjct: 201 GAHIGGAKRVRAILRAVVLGLLAMAA 223

[Close]

BLAST of Lsi04G009950 vs. TrEMBL
Match: A0A0A0KJ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 5.8e-123
Identity = 236/246 (95.93%), Postives = 243/246 (98.78%), Query Frame = 1


Query: 3   DDAPP-IRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSS 62
           DDAPP + LDP+KQSLLNRHTENHFTAG+IVRDIIIGVSDGLTVPFALAAGLSGANASSS
Sbjct: 10  DDAPPPVPLDPYKQSLLNRHTENHFTAGDIVRDIIIGVSDGLTVPFALAAGLSGANASSS 69

Query: 63  IVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAE 122
           IVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIV VPDTEAAE+AEILA+
Sbjct: 70  IVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVAVPDTEAAEVAEILAQ 129

Query: 123 YGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPL 182
           YGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPL
Sbjct: 130 YGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPL 189

Query: 183 IPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGM 242
           IPYMFI+NVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGA+ASAAAFGM
Sbjct: 190 IPYMFITNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAIASAAAFGM 249

Query: 243 AKAIQQ 248
           AKAIQQ
Sbjct: 250 AKAIQQ 255

[Close]

BLAST of Lsi04G009950 vs. TrEMBL
Match: B9SNF5_RICCO (Protein CCC1, putative OS=Ricinus communis GN=RCOM_1148480 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.3e-108
Identity = 204/239 (85.36%), Postives = 223/239 (93.31%), Query Frame = 1


Query: 8   IRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAG 67
           + L+P KQSLLN+H E HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANA+SSIVLTAG
Sbjct: 9   VNLEPEKQSLLNQHKERHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAG 68

Query: 68  IAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEYGIEPH 127
           +AEVAAGAISMGLGGYLAAKSE+DHY REL+REQEEIVTVPDTEAAE+AEILA+YGIEPH
Sbjct: 69  VAEVAAGAISMGLGGYLAAKSESDHYARELKREQEEIVTVPDTEAAEVAEILAQYGIEPH 128

Query: 128 EYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFI 187
           EY PVVNALRK+PQAWLDFMMKFELGLEKPDPRRALQSAFTIA+AYILGG+VPLIPYMFI
Sbjct: 129 EYQPVVNALRKQPQAWLDFMMKFELGLEKPDPRRALQSAFTIAIAYILGGIVPLIPYMFI 188

Query: 188 SNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMAKAIQ 247
                AV ASV LTL+ALL+FGYAKG+FTGNKPF++A QT LIGA+ASAAAFGMAK +Q
Sbjct: 189 PRAQDAVVASVILTLIALLIFGYAKGHFTGNKPFRNAFQTCLIGAIASAAAFGMAKVVQ 247

[Close]

BLAST of Lsi04G009950 vs. TrEMBL
Match: A9PFY9_POPTR (Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0010s11480g PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.0e-107
Identity = 205/245 (83.67%), Postives = 223/245 (91.02%), Query Frame = 1


Query: 1   MADDAPPIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASS 60
           MA     + LDP KQ+LLN+H E HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANA+S
Sbjct: 1   MATSTQGVNLDPEKQTLLNQHKEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATS 60

Query: 61  SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILA 120
           SIVLTAG+AEVAAGAISMGLGGYLAAKSEADHY RELRREQEEI +VPDTEAAE+AEILA
Sbjct: 61  SIVLTAGVAEVAAGAISMGLGGYLAAKSEADHYARELRREQEEIKSVPDTEAAEVAEILA 120

Query: 121 EYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVP 180
            YGIEPHEYGPVV+ALRK+PQAWLDFMMKFELGLEKPDPRRALQSA TIA+AYILGG VP
Sbjct: 121 HYGIEPHEYGPVVSALRKKPQAWLDFMMKFELGLEKPDPRRALQSALTIAIAYILGGFVP 180

Query: 181 LIPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFG 240
           LIPYMFI +   AV ASV LTL ALL+FG+AKGYFTGNKPF+SA+QT LIGA+ASAAAFG
Sbjct: 181 LIPYMFIPSAQDAVIASVILTLAALLIFGFAKGYFTGNKPFRSALQTALIGAIASAAAFG 240

Query: 241 MAKAI 246
           +AKA+
Sbjct: 241 IAKAV 245

[Close]

BLAST of Lsi04G009950 vs. TrEMBL
Match: A9PEU8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.8e-107
Identity = 206/245 (84.08%), Postives = 221/245 (90.20%), Query Frame = 1


Query: 1   MADDAPPIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASS 60
           MA     + LDP KQ+LLN+H E HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANA+S
Sbjct: 1   MATSTQGVNLDPEKQTLLNQHKEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATS 60

Query: 61  SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILA 120
           SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHY REL REQEEI +VPDTEAAE+AEILA
Sbjct: 61  SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYARELGREQEEIKSVPDTEAAEVAEILA 120

Query: 121 EYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVP 180
            YGIEPHEYGPVV+ALRK+PQAWLDFMMKFELGLEKPDPRRALQSA TIA+AYILGG VP
Sbjct: 121 HYGIEPHEYGPVVSALRKKPQAWLDFMMKFELGLEKPDPRRALQSALTIAIAYILGGFVP 180

Query: 181 LIPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFG 240
           LIPYMFI +   AV ASV LTL ALL+FG+AKGYFTGNKPF+SA QT LIGA+ASAAAFG
Sbjct: 181 LIPYMFIPSAQDAVIASVILTLAALLIFGFAKGYFTGNKPFRSAFQTALIGAIASAAAFG 240

Query: 241 MAKAI 246
           MAKA+
Sbjct: 241 MAKAV 245

[Close]

BLAST of Lsi04G009950 vs. TrEMBL
Match: V4U611_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016475mg PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.0e-106
Identity = 201/236 (85.17%), Postives = 221/236 (93.64%), Query Frame = 1


Query: 10  LDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIA 69
           ++P KQ+LLN+H E HFTAGEIVRD+IIGVSDGLTVPFALAAGLSGANA+SSIVLTAGIA
Sbjct: 4   IEPEKQTLLNQHREKHFTAGEIVRDVIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIA 63

Query: 70  EVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEYGIEPHEY 129
           EVAAGAISMGLGGYLAAKSEADHY REL+REQEEI+TVPDTEAAE+A ILA+YGIEPHEY
Sbjct: 64  EVAAGAISMGLGGYLAAKSEADHYARELKREQEEIITVPDTEAAEVAGILADYGIEPHEY 123

Query: 130 GPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFISN 189
           GPVVNALRK+PQAWL+FMMKFELGLEKPDPRRAL SA TIA+AY+LGG+VPLIPYMFI  
Sbjct: 124 GPVVNALRKKPQAWLEFMMKFELGLEKPDPRRALHSALTIAIAYVLGGMVPLIPYMFIPR 183

Query: 190 VTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMAKAI 246
            T AV ASVA+TLVALL+FGYAKGYFTGNKP KSA+QT  IGA+ASAAAFGMAKA+
Sbjct: 184 ATDAVLASVAVTLVALLIFGYAKGYFTGNKPVKSALQTAFIGAIASAAAFGMAKAV 239

[Close]

BLAST of Lsi04G009950 vs. TAIR10
Match: AT2G01770.1 (AT2G01770.1 vacuolar iron transporter 1)

HSP 1 Score: 373.6 bits (958), Expect = 9.2e-104
Identity = 190/244 (77.87%), Postives = 215/244 (88.11%), Query Frame = 1


Query: 3   DDAPPIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSI 62
           D    I ++P KQ+LL+ HTE HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSI
Sbjct: 6   DKITRISIEPEKQTLLDHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSI 65

Query: 63  VLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEY 122
           VLTAGIAEVAAGAISMGLGGYLAAKSE DHY RE++REQEEIV VP+TEAAE+AEILA+Y
Sbjct: 66  VLTAGIAEVAAGAISMGLGGYLAAKSEEDHYAREMKREQEEIVAVPETEAAEVAEILAQY 125

Query: 123 GIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLI 182
           GIEPHEY PVVNALRK PQAWLDFMM+FELGLEKPDP+RALQSAFTIA+AY+LGG +PL+
Sbjct: 126 GIEPHEYSPVVNALRKNPQAWLDFMMRFELGLEKPDPKRALQSAFTIAIAYVLGGFIPLL 185

Query: 183 PYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMA 242
           PYM I +   AV ASV +TL AL +FGYAKG+FTG+KP +SA +T  IGA+ASAAAF +A
Sbjct: 186 PYMLIPHAMDAVVASVVITLFALFIFGYAKGHFTGSKPLRSAFETAFIGAIASAAAFCLA 245

Query: 243 KAIQ 247
           K +Q
Sbjct: 246 KVVQ 249

[Close]

BLAST of Lsi04G009950 vs. NCBI nr
Match: gi|778698101|ref|XP_004142309.2| (PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus])

HSP 1 Score: 448.4 bits (1152), Expect = 8.3e-123
Identity = 236/246 (95.93%), Postives = 243/246 (98.78%), Query Frame = 1


Query: 3   DDAPP-IRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSS 62
           DDAPP + LDP+KQSLLNRHTENHFTAG+IVRDIIIGVSDGLTVPFALAAGLSGANASSS
Sbjct: 10  DDAPPPVPLDPYKQSLLNRHTENHFTAGDIVRDIIIGVSDGLTVPFALAAGLSGANASSS 69

Query: 63  IVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAE 122
           IVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIV VPDTEAAE+AEILA+
Sbjct: 70  IVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVAVPDTEAAEVAEILAQ 129

Query: 123 YGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPL 182
           YGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPL
Sbjct: 130 YGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPL 189

Query: 183 IPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGM 242
           IPYMFI+NVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGA+ASAAAFGM
Sbjct: 190 IPYMFITNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAIASAAAFGM 249

Query: 243 AKAIQQ 248
           AKAIQQ
Sbjct: 250 AKAIQQ 255

[Close]

BLAST of Lsi04G009950 vs. NCBI nr
Match: gi|659129452|ref|XP_008464694.1| (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo])

HSP 1 Score: 441.4 bits (1134), Expect = 1.0e-120
Identity = 233/247 (94.33%), Postives = 240/247 (97.17%), Query Frame = 1


Query: 3   DDAPP--IRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASS 62
           DDAPP  + LD +KQSLLNRHTENHFTAG++VRDIIIGVSDGLTVPFALAAGLSGANASS
Sbjct: 5   DDAPPPPVPLDSYKQSLLNRHTENHFTAGDVVRDIIIGVSDGLTVPFALAAGLSGANASS 64

Query: 63  SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILA 122
           SIVLTAGIAEVAAGA+SMGLGGYLAAKSEADHYMRELRREQEEIV VPDTEAAE+AEILA
Sbjct: 65  SIVLTAGIAEVAAGAMSMGLGGYLAAKSEADHYMRELRREQEEIVAVPDTEAAEVAEILA 124

Query: 123 EYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVP 182
            YGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVP
Sbjct: 125 NYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVP 184

Query: 183 LIPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFG 242
           LIPYMFISNV RAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGA+ASAAAFG
Sbjct: 185 LIPYMFISNVKRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAIASAAAFG 244

Query: 243 MAKAIQQ 248
           MAKAIQQ
Sbjct: 245 MAKAIQQ 251

[Close]

BLAST of Lsi04G009950 vs. NCBI nr
Match: gi|255573190|ref|XP_002527524.1| (PREDICTED: vacuolar iron transporter 1 isoform X1 [Ricinus communis])

HSP 1 Score: 398.7 bits (1023), Expect = 7.6e-108
Identity = 204/239 (85.36%), Postives = 223/239 (93.31%), Query Frame = 1


Query: 8   IRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAG 67
           + L+P KQSLLN+H E HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANA+SSIVLTAG
Sbjct: 9   VNLEPEKQSLLNQHKERHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAG 68

Query: 68  IAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILAEYGIEPH 127
           +AEVAAGAISMGLGGYLAAKSE+DHY REL+REQEEIVTVPDTEAAE+AEILA+YGIEPH
Sbjct: 69  VAEVAAGAISMGLGGYLAAKSESDHYARELKREQEEIVTVPDTEAAEVAEILAQYGIEPH 128

Query: 128 EYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFI 187
           EY PVVNALRK+PQAWLDFMMKFELGLEKPDPRRALQSAFTIA+AYILGG+VPLIPYMFI
Sbjct: 129 EYQPVVNALRKQPQAWLDFMMKFELGLEKPDPRRALQSAFTIAIAYILGGIVPLIPYMFI 188

Query: 188 SNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFGMAKAIQ 247
                AV ASV LTL+ALL+FGYAKG+FTGNKPF++A QT LIGA+ASAAAFGMAK +Q
Sbjct: 189 PRAQDAVVASVILTLIALLIFGYAKGHFTGNKPFRNAFQTCLIGAIASAAAFGMAKVVQ 247

[Close]

BLAST of Lsi04G009950 vs. NCBI nr
Match: gi|743822647|ref|XP_011021748.1| (PREDICTED: vacuolar iron transporter 1-like [Populus euphratica])

HSP 1 Score: 397.1 bits (1019), Expect = 2.2e-107
Identity = 207/245 (84.49%), Postives = 222/245 (90.61%), Query Frame = 1


Query: 1   MADDAPPIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASS 60
           MA     + LDP KQ+LLN+H E HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANA+S
Sbjct: 1   MATSTQGVDLDPEKQTLLNQHQEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATS 60

Query: 61  SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILA 120
           SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHY RELRREQEEI +VPDTEAAE+AEILA
Sbjct: 61  SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYARELRREQEEIKSVPDTEAAEVAEILA 120

Query: 121 EYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVP 180
            YGIEPHEYGPVV+ALRK+PQAWLDFMMKFELGLEKPDPRRALQSA TIA+AYILGG VP
Sbjct: 121 HYGIEPHEYGPVVSALRKKPQAWLDFMMKFELGLEKPDPRRALQSALTIAIAYILGGFVP 180

Query: 181 LIPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFG 240
           LIPYMFI +   AV ASV LTL ALL+FG+AKGYFTGNKPF+SA QT LIGA+ASAAAFG
Sbjct: 181 LIPYMFIPSAQDAVIASVILTLAALLIFGFAKGYFTGNKPFRSAFQTALIGAIASAAAFG 240

Query: 241 MAKAI 246
           MAKA+
Sbjct: 241 MAKAV 245

[Close]

BLAST of Lsi04G009950 vs. NCBI nr
Match: gi|224108249|ref|XP_002314775.1| (integral membrane family protein [Populus trichocarpa])

HSP 1 Score: 396.7 bits (1018), Expect = 2.9e-107
Identity = 205/245 (83.67%), Postives = 223/245 (91.02%), Query Frame = 1


Query: 1   MADDAPPIRLDPHKQSLLNRHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASS 60
           MA     + LDP KQ+LLN+H E HFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANA+S
Sbjct: 1   MATSTQGVNLDPEKQTLLNQHKEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATS 60

Query: 61  SIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVTVPDTEAAEIAEILA 120
           SIVLTAG+AEVAAGAISMGLGGYLAAKSEADHY RELRREQEEI +VPDTEAAE+AEILA
Sbjct: 61  SIVLTAGVAEVAAGAISMGLGGYLAAKSEADHYARELRREQEEIKSVPDTEAAEVAEILA 120

Query: 121 EYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVP 180
            YGIEPHEYGPVV+ALRK+PQAWLDFMMKFELGLEKPDPRRALQSA TIA+AYILGG VP
Sbjct: 121 HYGIEPHEYGPVVSALRKKPQAWLDFMMKFELGLEKPDPRRALQSALTIAIAYILGGFVP 180

Query: 181 LIPYMFISNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAVASAAAFG 240
           LIPYMFI +   AV ASV LTL ALL+FG+AKGYFTGNKPF+SA+QT LIGA+ASAAAFG
Sbjct: 181 LIPYMFIPSAQDAVIASVILTLAALLIFGFAKGYFTGNKPFRSALQTALIGAIASAAAFG 240

Query: 241 MAKAI 246
           +AKA+
Sbjct: 241 IAKAV 245

The following BLAST results are available for this feature:

BLAST of Lsi04G009950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VIT1_ARATH	1.6e-102	77.87	Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1	[more]
VIT11_ORYSJ	1.3e-96	73.33	Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=...	[more]
VIT12_ORYSJ	5.1e-96	77.22	Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=...	[more]
CCC1_YEAST	7.2e-34	39.01	Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCC1 PE...	[more]
PCL1_SCHPO	1.2e-09	25.73	Fe(2+)/Mn(2+) transporter pcl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of Lsi04G009950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ93_CUCSA	5.8e-123	95.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1	[more]
B9SNF5_RICCO	5.3e-108	85.36	Protein CCC1, putative OS=Ricinus communis GN=RCOM_1148480 PE=4 SV=1	[more]
A9PFY9_POPTR	2.0e-107	83.67	Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0010s11480g PE=...	[more]
A9PEU8_POPTR	5.8e-107	84.08	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
V4U611_9ROSI	1.0e-106	85.17	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016475mg PE=4 SV=1	[more]

BLAST of Lsi04G009950 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01770.1	9.2e-104	77.87	vacuolar iron transporter 1	[more]

BLAST of Lsi04G009950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778698101\|ref\|XP_004142309.2\|	8.3e-123	95.93	PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus]	[more]
gi\|659129452\|ref\|XP_008464694.1\|	1.0e-120	94.33	PREDICTED: vacuolar iron transporter 1-like [Cucumis melo]	[more]
gi\|255573190\|ref\|XP_002527524.1\|	7.6e-108	85.36	PREDICTED: vacuolar iron transporter 1 isoform X1 [Ricinus communis]	[more]
gi\|743822647\|ref\|XP_011021748.1\|	2.2e-107	84.49	PREDICTED: vacuolar iron transporter 1-like [Populus euphratica]	[more]
gi\|224108249\|ref\|XP_002314775.1\|	2.9e-107	83.67	integral membrane family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008217	Ccc1_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006880	intracellular sequestering of iron ion
biological_process	GO:0008150	biological_process
biological_process	GO:0034755	iron ion transmembrane transport
biological_process	GO:0030026	cellular manganese ion homeostasis
biological_process	GO:0071281	cellular response to iron ion
biological_process	GO:0071421	manganese ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005381	iron ion transmembrane transporter activity
molecular_function	GO:0005384	manganese ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G009950.1	Lsi04G009950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008217	Ccc1 family	PFAM	PF01988	VIT1	coord: 32..242 score: 3.8
None	No IPR available	unknown	Coil	Coil	coord: 83..103 scor
None	No IPR available	PANTHER	PTHR31851	FAMILY NOT NAMED	coord: 8..246 score: 4.0E
None	No IPR available	PANTHER	PTHR31851:SF9	SUBFAMILY NOT NAMED	coord: 8..246 score: 4.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G009950	Csa5G025920	Cucumber (Chinese Long) v2	culsiB367
Lsi04G009950	CSPI05G00690	Wild cucumber (PI 183967)	cpilsiB371
Lsi04G009950	Cucsa.174130	Cucumber (Gy14) v1	cgylsiB289
Lsi04G009950	CmaCh04G010440	Cucurbita maxima (Rimu)	cmalsiB672
Lsi04G009950	CmoCh04G011140	Cucurbita moschata (Rifu)	cmolsiB662
Lsi04G009950	Cla002209	Watermelon (97103) v1	lsiwmB304
Lsi04G009950	ClCG07G005420	Watermelon (Charleston Gray)	lsiwcgB297
Lsi04G009950	Cla97C07G133740	Watermelon (97103) v2	lsiwmbB298
Lsi04G009950	Bhi07G000379	Wax gourd	lsiwgoB381
Lsi04G009950	Cp4.1LG01g07100	Cucurbita pepo (Zucchini)	cpelsiB354
Lsi04G009950	CsGy5G010950	Cucumber (Gy14) v2	cgyblsiB336
Lsi04G009950	Carg00150	Silver-seed gourd	carlsiB605
Lsi04G009950	CsaV3_5G014530	Cucumber (Chinese Long) v3	cuclsiB392

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G009950	Watermelon (97103) v1	lsiwmB306
Lsi04G009950	Watermelon (97103) v2	lsiwmbB274
Lsi04G009950	Cucurbita maxima (Rimu)	cmalsiB671
Lsi04G009950	Cucurbita moschata (Rifu)	cmolsiB663
Lsi04G009950	Cucurbita pepo (Zucchini)	cpelsiB355
Lsi04G009950	Melon (DHL92) v3.5.1	lsimeB283