Csa5G025920 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTATGGCTATGCCTACTCACCACGACGACGCTCCACCACCAGTCCCCCTCGACCCTTACAAGCAATCTCTTCTCAACCGCCACACCGAGAATCACTTCACCGCAGGCGACATCGTCCGCGATATCATCATCGGCGTCTCTGACGGTCTCACCGTCCCTTTCGCCCTCGCCGCTGGTCTTTCCGGCGCAAACGCCTCTTCTTCTATTGTTCTCACCGCTGGAATCGCTGAAGTCGCAGCTGGCGCTATCTCGATGGGACTCGGCGGGTGCGTTTGTTAATTAATATTGGTTTCAATTTGGGAGGGTTTAGGGGTTTTTTAGAATGTTATATATATATGTTAGGTATCTTGCGGCGAAGAGTGAAGCGGATCATTATATGAGAGAATTGCGGAGAGAGCAAGAAGAAATCGTTGCAGTTCCCGATACTGGTAATTATTATAAATCTCTTTTCCATCTCTACTTTTTCTTTCTTTCTACACTCTCATTCAAATCACATTCCTTTTCTTTACTCACTTCTTATTGTTTTTTCTTTTATACAAAATTATTGCAACCCCCAAAATGGTTGAAATATTAGGATTCACTTCTAAAAATATTATCAATGATGATAGAATTTGGAAATTTCAAAAATCTAATATTTTGTAAATCTTTCTATCTAATCATTAATAAAATTTTAAATTTTACAATACTTTCTAACTTACTTTCTTTCTACCCAATTCATCTGCTCAACAAAACTATTCTAATTACTAATTAGTATTTACATTTCCCCTAATGCCAAAATATTCCTTCCTATTTTCCTTTAATAATTCTTTCAAAACAAACTACTTTTTTTCCTACTTTTTTTTTTAAACTACGATATTTAATCTATTGCTTATAATTCCATACATTGTATCTTTGGTGTTCTATATCTTAATTTGTTGAGATTTTCATGTGTTATTCATTAACTTACCCTGTCTCAATTTTTTTGGGTTGGTCCAAAAAATACCATCAACTCAATTCAACCTATACCATAAACTATAGTGTTTGGTAAAGGGTTATTGTGAGAGTAGTAGAAGTAGTTGGTACGAACACACACTTGAATTTAAAAAGAAAAAGAAAATTGTTGGGTAAAATTGAACGATAGATTTGAAAAGTGGTTGGTTAATAGTTTAAAATTACTATATCACTGTATTTTACATATAATAACTAAACGTACTATTATATAAGATTTAAAAATAATAGTTGTCGAGTTATGTGAGGAAAATACTAGAGATATATAATATACATTTTAAATCTGAACCAAAAAGTTTAAAAATGAAAATTAGAAATTAGAAATTTATTAAAAAGCAGAATCTGATTTTACAAAAAGCTAAAATCTTATGTAAGGAACTGAGTTTAGAACTGATGGAAAATCAACATAGGTTGTGAAAGTGAATTTGATATATAAAAAAAATATTTTTAACCAAACATAAATTAGGGTTAAAATTCTTTTTAAATCACTTTTAACTCTCTTGAAATCAATCTCAAATACACCTTATTCTCGAGTTTGGGAGTACTTTATATCTTGAAATTGTTTTATATAAAAAAATGTCTATCTTGAATTTTTATGAATAAATTTTCCAATATTTTGTAATAGTTTTTTCCCCTTTTATTATTTTGAGGATTTAAAGAATATCTGTTCCTTCTAAATTATTTTTCTAATTTTAATACCATATAATTATGTAAAATTATATAAAGAAATTTTATGGAACGTTTATTAAACCTGTTCTTAAAAACTATGTATTAAAAAAGTGTGAAAATTTAGGGACCAATTCAAATTAAGTTTATAGAAAGCCTTTCTAAAAATTACAAAATTACTAATTTAACTTTGTTCTAAATTGTAATTAAATAACTGTGTTAGCTTATGTGCTTAAATTAAATGTACACTTGTAGTTATCATAATTTGAAAACTTTAACTTAGTCAGGGTTAAATATCTTCAATTATACTTTCTTTTGTCCATCTTTTTTTTCTTCGAAAGACATAGATACGAAAGTGTCTATGAACATGACTCAACTTTTTTTTTTCTTTCAAGTATATGTTCTTCACAAAGATAACTGAAATACACATAAAAGGTAAAACAATGTTCAATTCTTGACAATCATTTGTAGAAGTTGGATTCCACCAAACCAAGAAGTATTGAAACTATAATATAAATAATAATTTAACCAAATACAAAAAAGTAGGAATTGTTTTGAAAGAGAGAAATTAATATTTTATAATGTTAGAAATCCAGAAGCAGCAGAAGTAGCAGAGATATTGGCACAGTACGGAATCGAACCACACGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAGGCTTGGTTGGATTTCATGATGAAGTAATTAAGTTCCATCTCTATCTCATTCTCCTTCAATTCCTTTTATACCATTTTTTTCCTATCATAATCCTTTAGTTTCTTTATGCTTATTATTATTTACAACTGCTGAGCCATTGTCTAGTAATCAATTTGGCCTTGTTTGACAATCCTTTTGCTTTTTGGAAAAATATGTATGAAGGTTGTCCATGGAAATTAATGTCTAAGCCCAAAGGTGCCGAGCTCAATTGGGTTTAAGCGCTCCGAAAGGGAAAGTTAGCCCTTGAGTCCTTGACTAGTTGGGCAGAGCTCGTCCCATTTTATTGAAAAGGAAATGGTAGACTCGAGCTTACACTAGCATTCTACAACCTCGAGTTGTTACCCCCTACTCAACACTATCAAAATTGTACATACCCAAACGAGAGATCGGCAGAGAGAATGAACCTTATAAATAGTCCCACAATAACAACATCGAAGGGTAAACATTCTCTTTATGCTCACCTAGGCTGAATGCATATATTTACTAACTTAGGCGTAAGAGTGTACTCTACCCAACATCACACTTGCGTTAGTAATTTGCACGTCAGCTTCAGCTTTAATGTGTTTAGACAAAAAAAAAAAAAGTGGTTGGCAGAGCAAAAAGTGTCTGGATGAGAGATACTTGAATTAACATTTGGCACCATTTCTAGGGACAACACGTCCAAGCAAGGCCTAATAGTGTGTATGGTTGGCAATTGAACAAGAAAAAATCCCAATGAGGACATTGTCCTCCATGCCAGTGCAAATCACAACCAGAGCAAAGTTGACTCGACCCCCTAGTGAACGGTACACCCGTGAGGCAAAACCTTTGCAACCCACTTGTTCAGGTAATGACCTCAGGATCCCTGTTCTGCAACGAATTAGTCAATGAAAGCATGGGCCAATTCTCAAAAAGAGTCATATACTTCTGCAGGCACCTTTTGATATTAAGGTCGGGCTGGTCTCATGAGGTACATAGGGAAGGCATAGTAGCGTCTGACTGAATCCCATCTAGCTCTCCATGATTAAACTATATGTCTAGGACTCACTTAAGATATATGTAATATCAGTGAGTCAAAGTAGGTGTGGGTCTTGAGATTGTGAAATGTAAATTCTAGGCTTGGCATAGCATATATGAAGGGGTTTGACTTTCCTTTGGGTTGTGAGTGTTTGAGCCTTGAGCAACCCCTAAACATACAATGAAAAAGAAAAGAAAAAGCACATATAAATACAAAAGTAGCATTTATGAGTTTTCTATTATTAAGATTGGAGTTTTCCTCGAAAATCTAAGTAAGATATAGAAGTGAATAATTAATTTTGTTTGACAGTATTGTTAGGCGGTGAATTTATGTGGGTACCACAAATTTGTCTTCATATAAAAAAATCGAAGGTTAGGTATGTAATAATAGTAATACCCCATCAATAATCCACTCCAAGTTACCCAGACTGCTGGGGTGAAAAACCATAACCGAACTAAACCAAACCAAACCGGTTGGTTTGGTACAATTTTCCTGAGAATTTTGGTTCATCAGTTCAAAAAGTGAGGTATTCGGTTGTATTGAAATCAAGGGGAAAGAGGAAAAAATGGTTAAAACCAAACCAAATTGTTGAGAATCGAAATTAGCTGGTTTGATTCGGATTTATGCCTATCATAACCAAGGTATTCGGTTTTATTTGACCAAAACCAAACCCAACGGTGCACACCCCTAACTGACTACTCCCATCCCACCAAGATAACTAACGTCACACCTCTTTATTTATTGTTTAGGAACTTTGTGTTTATAAAATATTAAATTTGTAATTTATAGTTGATAAGTTCTTAAACTTTAAAAATATCTAATAAGTTGGACTTCTTCTAAAGATTACATTTAGATTGACAATTACTATAACAATAGTAATTGTAGTTATTGCAATAGTAACTAGTCATTACGATTCTTATGGTTATAATGATGGACATTACATATCAATTTATACATGAAGACCACAAACTTCTCTTGAAAACATTAATAAAGGCTCACTCACATAACATCCGCACTATGGTTTGATCTAAGGTATTCTTCTACTAGTATCGTCGAAACCTAGGTATTCTTCCATTAGTATCATCAAAATCAACATTGATACTCCAGCATTCATGACATACTTCTAATTGTACAACCAAAACTTAGAGTGAAATTTCTTACAATTTCAGAATGTTAGGTGAAATTGTGAAATCTAGGGTGTGAAATTGTGAAATCTAGGGTATGTTAGGGCCTTTCTATTAGAAAGCTCAAATTTTGTTTTTTGTTTTTCAAATTTATTTAGTTCAACAAATGTGTACCAAATAATCTAGTTTCTGTATTTGAAAATTGTTTTATGATTTTGTGATTTGCAAATCAATATTTTCAAAATTTTTAACATATGACGTAGTCATAAATTAAACAATAGTATTTTATATTAAACCTAATACTTAGCAGTAATCATATAACTAATTTTATAATTTATAAACATATTATTTAAAACAAGTGTTTAAATTAGAATCTCATTTCTTACTCTACTATCAAACATACATCTAAAACACATGAAAAAAAGACTTTTTTTTATAGTTGAATGTCTTGTTTTGAAATTTTTATCTTCAGGTTTGGAGTACGATGATTTCTCAGTGATCCAATAGGTATTCACATCCTTATATAATCCATTGTAAAGCATGGGTAACTATCAATAACATACAGTTTTGTTTTTTGTTCAATTGGTGTCTTTATCCATTAAACTATTGAAATAGCTAACATGACATAATTTTGCTACTGTCTTTTGGATAAGCAGACAGGTGTAATTGTAAACAACGAAATCACTTTGTAATTGTCAAAGTGAATAAATTCTTTCTACATTTTGAATTTTGAGAATTTTCTAATTCTTATGTTTCATGTTCTACAATTTTCATGCTTATCCTACGTATGAAACTGTAACCAGTAAAATCAACCTAATTTACCTCCATAAGAAAAACCCCTATTTACATGAAATATAAGCAGCAGCAGTAGTGTAGTAGAGCCACCAATGGACAAATATAATTTCAACATTTACTCTTATGATTTAATCCTTATTACTGTTTGGGTTGGTTATGTAGGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTACAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGATTGGTGCCTCTCATTCCTTACATGTTTATTACAAACGTGACGAGAGCCGTGACCGCATCTGTTGCATTGACACTAGTAGCATTGCTCGTGTTCGGGTATGCGAAGGGTTACTTCACTGGTAACAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATTGGAGCTATTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGAACTAACCAACCTCCCCATGACAACCTCTAATCAGAGAGTCCCCGTCCCCCAGGGTCACTTCTTTAGTCTAATATCAGAGATTATTTGCTACTTTCATTAGTTTTGTCTTGTTTAGTCTAATCTCAGAACATTATTCAATACTTTCATTAGTTGTCAGTTTAGGCCCAGAAATGAGAACATTTGATGTGGTTTTTAAAGCATTTTGTCATATGCAGGATTCAATTTTCTAAGAGCAACAAATATGTTTGAAAATCTTTTCCA ATGCCTATGGCTATGCCTACTCACCACGACGACGCTCCACCACCAGTCCCCCTCGACCCTTACAAGCAATCTCTTCTCAACCGCCACACCGAGAATCACTTCACCGCAGGCGACATCGTCCGCGATATCATCATCGGCGTCTCTGACGGTCTCACCGTCCCTTTCGCCCTCGCCGCTGGTCTTTCCGGCGCAAACGCCTCTTCTTCTATTGTTCTCACCGCTGGAATCGCTGAAGTCGCAGCTGGCGCTATCTCGATGGGACTCGGCGGGTATCTTGCGGCGAAGAGTGAAGCGGATCATTATATGAGAGAATTGCGGAGAGAGCAAGAAGAAATCGTTGCAGTTCCCGATACTGAAGCAGCAGAAGTAGCAGAGATATTGGCACAGTACGGAATCGAACCACACGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAGGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTACAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGATTGGTGCCTCTCATTCCTTACATGTTTATTACAAACGTGACGAGAGCCGTGACCGCATCTGTTGCATTGACACTAGTAGCATTGCTCGTGTTCGGGTATGCGAAGGGTTACTTCACTGGTAACAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATTGGAGCTATTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGA ATGCCTATGGCTATGCCTACTCACCACGACGACGCTCCACCACCAGTCCCCCTCGACCCTTACAAGCAATCTCTTCTCAACCGCCACACCGAGAATCACTTCACCGCAGGCGACATCGTCCGCGATATCATCATCGGCGTCTCTGACGGTCTCACCGTCCCTTTCGCCCTCGCCGCTGGTCTTTCCGGCGCAAACGCCTCTTCTTCTATTGTTCTCACCGCTGGAATCGCTGAAGTCGCAGCTGGCGCTATCTCGATGGGACTCGGCGGGTATCTTGCGGCGAAGAGTGAAGCGGATCATTATATGAGAGAATTGCGGAGAGAGCAAGAAGAAATCGTTGCAGTTCCCGATACTGAAGCAGCAGAAGTAGCAGAGATATTGGCACAGTACGGAATCGAACCACACGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAGGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTACAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGATTGGTGCCTCTCATTCCTTACATGTTTATTACAAACGTGACGAGAGCCGTGACCGCATCTGTTGCATTGACACTAGTAGCATTGCTCGTGTTCGGGTATGCGAAGGGTTACTTCACTGGTAACAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATTGGAGCTATTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGA MPMAMPTHHDDAPPPVPLDPYKQSLLNRHTENHFTAGDIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVAVPDTEAAEVAEILAQYGIEPHEYGPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFITNVTRAVTASVALTLVALLVFGYAKGYFTGNKPFKSAIQTTLIGAIASAAAFGMAKAIQQ*
BLAST of Csa5G025920 vs. Swiss-Prot
Match: VIT1_ARATH (Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 4.3e-106 Identity = 192/245 (78.37%), Postives = 216/245 (88.16%), Query Frame = 1
BLAST of Csa5G025920 vs. Swiss-Prot
Match: VIT11_ORYSJ (Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.0e-99 Identity = 173/228 (75.88%), Postives = 206/228 (90.35%), Query Frame = 1
BLAST of Csa5G025920 vs. Swiss-Prot
Match: VIT12_ORYSJ (Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=2) HSP 1 Score: 360.1 bits (923), Expect = 1.9e-98 Identity = 178/230 (77.39%), Postives = 202/230 (87.83%), Query Frame = 1
BLAST of Csa5G025920 vs. Swiss-Prot
Match: CCC1_YEAST (Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCC1 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 3.6e-36 Identity = 83/223 (37.22%), Postives = 131/223 (58.74%), Query Frame = 1
BLAST of Csa5G025920 vs. Swiss-Prot
Match: PCL1_SCHPO (Fe(2+)/Mn(2+) transporter pcl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pcl1 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.3e-13 Identity = 54/206 (26.21%), Postives = 103/206 (50.00%), Query Frame = 1
BLAST of Csa5G025920 vs. TrEMBL
Match: A0A0A0KJ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 2.3e-138 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Csa5G025920 vs. TrEMBL
Match: B9SNF5_RICCO (Protein CCC1, putative OS=Ricinus communis GN=RCOM_1148480 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 2.0e-110 Identity = 206/239 (86.19%), Postives = 222/239 (92.89%), Query Frame = 1
BLAST of Csa5G025920 vs. TrEMBL
Match: A9PFY9_POPTR (Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0010s11480g PE=2 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 1.7e-109 Identity = 205/238 (86.13%), Postives = 221/238 (92.86%), Query Frame = 1
BLAST of Csa5G025920 vs. TrEMBL
Match: A9PEU8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 5.0e-109 Identity = 206/238 (86.55%), Postives = 219/238 (92.02%), Query Frame = 1
BLAST of Csa5G025920 vs. TrEMBL
Match: A0A061EAE2_THECC (Vacuolar iron transporter 1 OS=Theobroma cacao GN=TCM_011277 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 8.5e-109 Identity = 203/236 (86.02%), Postives = 217/236 (91.95%), Query Frame = 1
BLAST of Csa5G025920 vs. TAIR10
Match: AT2G01770.1 (AT2G01770.1 vacuolar iron transporter 1) HSP 1 Score: 385.6 bits (989), Expect = 2.4e-107 Identity = 192/245 (78.37%), Postives = 216/245 (88.16%), Query Frame = 1
BLAST of Csa5G025920 vs. TAIR10
Match: AT1G21140.1 (AT1G21140.1 Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 62.8 bits (151), Expect = 3.6e-10 Identity = 57/217 (26.27%), Postives = 88/217 (40.55%), Query Frame = 1
BLAST of Csa5G025920 vs. TAIR10
Match: AT3G43660.1 (AT3G43660.1 Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08 Identity = 54/217 (24.88%), Postives = 82/217 (37.79%), Query Frame = 1
BLAST of Csa5G025920 vs. TAIR10
Match: AT3G25190.1 (AT3G25190.1 Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08 Identity = 49/214 (22.90%), Postives = 83/214 (38.79%), Query Frame = 1
BLAST of Csa5G025920 vs. NCBI nr
Match: gi|778698101|ref|XP_004142309.2| (PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 3.3e-138 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Csa5G025920 vs. NCBI nr
Match: gi|659129452|ref|XP_008464694.1| (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo]) HSP 1 Score: 466.5 bits (1199), Expect = 3.1e-128 Identity = 240/251 (95.62%), Postives = 243/251 (96.81%), Query Frame = 1
BLAST of Csa5G025920 vs. NCBI nr
Match: gi|255573190|ref|XP_002527524.1| (PREDICTED: vacuolar iron transporter 1 isoform X1 [Ricinus communis]) HSP 1 Score: 406.8 bits (1044), Expect = 2.9e-110 Identity = 206/239 (86.19%), Postives = 222/239 (92.89%), Query Frame = 1
BLAST of Csa5G025920 vs. NCBI nr
Match: gi|743822647|ref|XP_011021748.1| (PREDICTED: vacuolar iron transporter 1-like [Populus euphratica]) HSP 1 Score: 405.2 bits (1040), Expect = 8.4e-110 Identity = 207/238 (86.97%), Postives = 220/238 (92.44%), Query Frame = 1
BLAST of Csa5G025920 vs. NCBI nr
Match: gi|224108249|ref|XP_002314775.1| (integral membrane family protein [Populus trichocarpa]) HSP 1 Score: 403.7 bits (1036), Expect = 2.4e-109 Identity = 205/238 (86.13%), Postives = 221/238 (92.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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