Cp4.1LG01g07100 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCTCTGACAGTTCGCGGCCACGGCAACACGCATCTCACTGTTCGACCTTTCGCATTCCATTTTCATTTCCTTCTCTTAATACTCTACTGGAGTTCCACTTTCTCTCTGCATCAATGGCGGACGGCTCTACACCACTCCACCTGGATCCTCACAAGCAGGCTCTTCTCAACCACCACACCGAGAAGCACTTCACCGCCGGCGAGATCGTCCGTGATATCATCATCGGCGTCTCCGACGGCCTCACTGTCCCTTTTGCCCTCGCCGCAGGACTTTCCGGCGCCAATGCCTCTTCCTCCATCGTCCTCACCGCCGGTATCGCTGAAGTCGCTGCCGGCGCTATCTCCATGGGACTCGGCGGGTGCGTCTCTCTCTCTCTCTCTCTCTCTCTCTTAATCACCGCCATTGACTTTCCGTGTACCTAGAAAAATGTCGCGCAATTAACACTGAACTCGATCGTTTTCGATATCCAAAATTTTGCTGGAGCATTGAATCGGTTCTAGTATAGAAATTGAATCTGAGTTTTTCTGTAATGCTGAACAGAATCGTCCTTCATTTCGCATTTGTATTTCGTGTTTATGTAGATATCTTGCGGCGAAGAGCGAAGCGGATCACTATATGAGAGAGCTGCGGAGAGAGCAAGAAGAAATCGTCGCGGTTCCCGATACTGGTACAGATTGATCAACTCTTTTCCTTTTTTCATTCCTTTTTAGAGTTTCATTTTAGATTTCTTACTGAAATGAAATTAGGATGAATATGAACAACATTTCGTAAATGGTAAGTTAGTTCGGAATAAGATTTGTTGTTCAATATGGCTTAAGGGTAGTTTGGGCATATGCTTAAAGAACGGCTTTTCCACGTCAAAAATTGGGATTTCTGTTAAATATTTGTTTTAAGGTTAAATTATTAAATAACACTTCGGTCAATTTTGCCCTTTTATTCTTTCAAAAATTACAAACCTTTCATATACATTGTTTTAAAATATTTAGACAACAAGTTATGTTTTAAAATATTGCAAACATTGTGTCGTGTCAATCAGCTCATATCTGATTAAAATACGTGTCCTAACCAATGGTGAATCCCTGTAGTTGAATTAGAAAAACACTAAAACAATATTCAATTTCTACTTTTGAAGATCAATCCAACAAACTCATTTGAATTTAAAACTTTTCTTTTAGTATGATAGAATGCGAGGTTAACATGTTATTGTCTTTTGAAAGAATTTTATTTGGCAATATAAATGCAGAAGCGGCAGAAGTAGCAGAGATATTGGCACAGTATGGGATTGAACCCCATGAATATGCTCCAGTTGTGAATGCTCTTAGGAAGAGACCTCAAGCTTGGTTGGATTTCATGATGAAGTAAGTTCTCTTTCTCCTTCTTTAGCTATGACACCATTTTATAATTATTTCATCTTTTGTTTTCTGTTTAATAAGATTGATATTTTCCTTTATTAAAATCCATATAAGATATAGACGTGAATATTTTATTTAATATTCTTAGGCGGTGAGTTTATCTCGATCCCAGAAATTTGTCTCATATAGAAAGCAAAGTTTAGCTTTGTAATAATACCCATCTATAATCCATTTGAAGTTTCTAGCCTTTTCTAACTTACATGTTCACTGCTGCCACCCAAGAAGATACTGACATCACTATTTTCAGCTGCTTCCTAAGGTGGTTTCTCAAAACAAATAACCTTATTTTCTTTTTCTTCAAATTACAAATTTAGTAGTTAATTTTTTTTTTTTTTCACTTTAAATTTTACGATAAGTCCATCATATTCAAAAGACAAGTTTAGAAAGTATTATCAAGGATGAGTTTAGCAAACAGTATAATTTCAGGTTCGGTTCATGATTTAATCCGTCAACTGTTTGTGTGGTGTGGTGATGTAGATTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCACTCACAATTGCATTGGCTTACATATTGGGGGGGCTGGTGCCGCTCATTCCTTACATGTTTATTGCAAATGCAACCAGAGCAGTGACAGCGTCAGTTGCATTGACACTATTAGCGCTGCTCGTTTTCGGGTATGCAAAGGGTTACTTCACCGGTAATAAGCCCTTTCAAAGTGCCATCCAAACCACCCTTATCGGAGCCATCGCATCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACTGTGAACTAACCAGCCCCCATGTCAATATCTAATAAGAGTATCCCCCCCTAAGGCCACGTTTTTAGTCTAATCTCATAAGATGAGTCTAAAACTTTTGCCAGTTTTCTCAGTTCAGGTCTAGAAATGAACATTTGATGCGGATCTTAGAACATTAAAACATCTTTTTCAATCCTTGAAGTGTTTGGTTTGGTATAACGCTTGAAAGTTGAAACAAAAGTATTACCTTGCGGCATCACCAAGAAAAAGATGGTTGAAATTCTATAAACCTGTCTGAAACTCATTACTCTACTCAGGACATTGAAATGGCAGCAGCTTAAGATTCATCCAACCTTTGTGACATCTCAAAAGTTTCACATCTCTCCATTTGCCTGATTAGAATCTCAAAATCCTGTGACTTCTCTTCATGAGTTCGAGTATCGATTGTTTCCATATCCAGTTCATCGTCCTCATTGTCCACCGATCGTTTTTCATGGTCAATTTTTGTAGCATTATCTGAATTCCCAGAAAAAGGGCTAGCTAGAAGAAGCTGCTCCCATGCAACATCTTGTACATCTGGAAGAACAAATTGAGTATGATTGTCTAAACACAACTTTTCATCCATAAGCACTTTCATGAAGTCAGAATTAAGGAAAAAGTCCTTCATTCCATCAGGAAATGGATCAGTTTCTTGCTGTTTCCCCATACCCGACACTGCTGGAAGTAGATTTGCTGGCAGTTCATCTAATGGTCGTTGATGATACCTGACTATCATACCATTTGAAGGTACTTGTTTATCATCTGGTATTTGTTCTAGCATATTGCTCGTGTCGGCCATGCGCCAATTCTTCTCTTTCGGTTGAAGAAACTGAACCAAAAATCCAGGGCTTTGCACAGCCATTACTAAGAATGACAGCATCTGCTGTTGATTCTTTTCCACGCCTTGAAGGCGGTCTCTCAATACGAGCAACTTGTCCTCTGAAGTTTCTTGGTGCTGCTTAAGTTTAACCAATTCCTGCATTACAGAGTTTTTATCAATTTTAAGACTCTCAACTTCCTTCCATAGCTCTGTATAATCATGTAGTTCAACTTGTCCCTCAGACTTGTCTTGGGGCTGCGCTGCGTTATGCTGATCTGTGCCCTGGATGTTTTTCCTTCTGTAGATGTTCTTTAATAGATG TGTCTCTGACAGTTCGCGGCCACGGCAACACGCATCTCACTGTTCGACCTTTCGCATTCCATTTTCATTTCCTTCTCTTAATACTCTACTGGAGTTCCACTTTCTCTCTGCATCAATGGCGGACGGCTCTACACCACTCCACCTGGATCCTCACAAGCAGGCTCTTCTCAACCACCACACCGAGAAGCACTTCACCGCCGGCGAGATCGTCCGTGATATCATCATCGGCGTCTCCGACGGCCTCACTGTCCCTTTTGCCCTCGCCGCAGGACTTTCCGGCGCCAATGCCTCTTCCTCCATCGTCCTCACCGCCGGTATCGCTGAAGTCGCTGCCGGCGCTATCTCCATGGGACTCGGCGGATATCTTGCGGCGAAGAGCGAAGCGGATCACTATATGAGAGAGCTGCGGAGAGAGCAAGAAGAAATCGTCGCGGTTCCCGATACTGAAGCGGCAGAAGTAGCAGAGATATTGGCACAGTATGGGATTGAACCCCATGAATATGCTCCAGTTGTGAATGCTCTTAGGAAGAGACCTCAAGCTTGGTTGGATTTCATGATGAAATTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCACTCACAATTGCATTGGCTTACATATTGGGGGGGCTGGTGCCGCTCATTCCTTACATGTTTATTGCAAATGCAACCAGAGCAGTGACAGCGTCAGTTGCATTGACACTATTAGCGCTGCTCGTTTTCGGGTATGCAAAGGGTTACTTCACCGGTAATAAGCCCTTTCAAAGTGCCATCCAAACCACCCTTATCGGAGCCATCGCATCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACTGTGAACTAACCAGCCCCCATGTCAATATCTAATAAGAGTATCCCCCCCTAAGGCCACGTTTTTAGTCTAATCTCATAAGATGAGTCTAAAACTTTTGCCAGTTTTCTCAGTTCAGGTCTAGAAATGAACATTTGATGCGGATCTTAGAACATTAAAACATCTTTTTCAATCCTTGAAGTGTTTGGTTTGGTATAACGCTTGAAAGTTGAAACAAAAGTATTACCTTGCGGCATCACCAAGAAAAAGATGGTTGAAATTCTATAAACCTGTCTGAAACTCATTACTCTACTCAGGACATTGAAATGGCAGCAGCTTAAGATTCATCCAACCTTTGTGACATCTCAAAAGTTTCACATCTCTCCATTTGCCTGATTAGAATCTCAAAATCCTGTGACTTCTCTTCATGAGTTCGAGTATCGATTGTTTCCATATCCAGTTCATCGTCCTCATTGTCCACCGATCGTTTTTCATGGTCAATTTTTGTAGCATTATCTGAATTCCCAGAAAAAGGGCTAGCTAGAAGAAGCTGCTCCCATGCAACATCTTGTACATCTGGAAGAACAAATTGAGTATGATTGTCTAAACACAACTTTTCATCCATAAGCACTTTCATGAAGTCAGAATTAAGGAAAAAGTCCTTCATTCCATCAGGAAATGGATCAGTTTCTTGCTGTTTCCCCATACCCGACACTGCTGGAAGTAGATTTGCTGGCAGTTCATCTAATGGTCGTTGATGATACCTGACTATCATACCATTTGAAGGTACTTGTTTATCATCTGGTATTTGTTCTAGCATATTGCTCGTGTCGGCCATGCGCCAATTCTTCTCTTTCGGTTGAAGAAACTGAACCAAAAATCCAGGGCTTTGCACAGCCATTACTAAGAATGACAGCATCTGCTGTTGATTCTTTTCCACGCCTTGAAGGCGGTCTCTCAATACGAGCAACTTGTCCTCTGAAGTTTCTTGGTGCTGCTTAAGTTTAACCAATTCCTGCATTACAGAGTTTTTATCAATTTTAAGACTCTCAACTTCCTTCCATAGCTCTGTATAATCATGTAGTTCAACTTGTCCCTCAGACTTGTCTTGGGGCTGCGCTGCGTTATGCTGATCTGTGCCCTGGATGTTTTTCCTTCTGTAGATGTTCTTTAATAGATG ATGGCGGACGGCTCTACACCACTCCACCTGGATCCTCACAAGCAGGCTCTTCTCAACCACCACACCGAGAAGCACTTCACCGCCGGCGAGATCGTCCGTGATATCATCATCGGCGTCTCCGACGGCCTCACTGTCCCTTTTGCCCTCGCCGCAGGACTTTCCGGCGCCAATGCCTCTTCCTCCATCGTCCTCACCGCCGGTATCGCTGAAGTCGCTGCCGGCGCTATCTCCATGGGACTCGGCGGATATCTTGCGGCGAAGAGCGAAGCGGATCACTATATGAGAGAGCTGCGGAGAGAGCAAGAAGAAATCGTCGCGGTTCCCGATACTGAAGCGGCAGAAGTAGCAGAGATATTGGCACAGTATGGGATTGAACCCCATGAATATGCTCCAGTTGTGAATGCTCTTAGGAAGAGACCTCAAGCTTGGTTGGATTTCATGATGAAATTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCACTCACAATTGCATTGGCTTACATATTGGGGGGGCTGGTGCCGCTCATTCCTTACATGTTTATTGCAAATGCAACCAGAGCAGTGACAGCGTCAGTTGCATTGACACTATTAGCGCTGCTCGTTTTCGGGTATGCAAAGGGTTACTTCACCGGTAATAAGCCCTTTCAAAGTGCCATCCAAACCACCCTTATCGGAGCCATCGCATCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACTGTGA MADGSTPLHLDPHKQALLNHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELRREQEEIVAVPDTEAAEVAEILAQYGIEPHEYAPVVNALRKRPQAWLDFMMKFELGLEKPDPRRALQSALTIALAYILGGLVPLIPYMFIANATRAVTASVALTLLALLVFGYAKGYFTGNKPFQSAIQTTLIGAIASAAAFGMAKAIQL
BLAST of Cp4.1LG01g07100 vs. Swiss-Prot
Match: VIT1_ARATH (Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.7e-104 Identity = 196/244 (80.33%), Postives = 219/244 (89.75%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. Swiss-Prot
Match: VIT11_ORYSJ (Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 4.2e-98 Identity = 179/243 (73.66%), Postives = 214/243 (88.07%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. Swiss-Prot
Match: VIT12_ORYSJ (Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=2) HSP 1 Score: 349.7 bits (896), Expect = 2.5e-95 Identity = 183/237 (77.22%), Postives = 208/237 (87.76%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. Swiss-Prot
Match: CCC1_YEAST (Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCC1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 5.2e-32 Identity = 81/223 (36.32%), Postives = 133/223 (59.64%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. Swiss-Prot
Match: PCL1_SCHPO (Fe(2+)/Mn(2+) transporter pcl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pcl1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.3e-10 Identity = 55/216 (25.46%), Postives = 112/216 (51.85%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TrEMBL
Match: A0A0A0KJ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 2.1e-117 Identity = 228/244 (93.44%), Postives = 234/244 (95.90%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TrEMBL
Match: B9SNF5_RICCO (Protein CCC1, putative OS=Ricinus communis GN=RCOM_1148480 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 1.5e-107 Identity = 207/245 (84.49%), Postives = 225/245 (91.84%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TrEMBL
Match: A9PFY9_POPTR (Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0010s11480g PE=2 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 2.0e-107 Identity = 209/245 (85.31%), Postives = 225/245 (91.84%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TrEMBL
Match: A9PEU8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 5.8e-107 Identity = 210/245 (85.71%), Postives = 223/245 (91.02%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TrEMBL
Match: A0A0J8BVU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g185590 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 4.9e-106 Identity = 204/236 (86.44%), Postives = 219/236 (92.80%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TAIR10
Match: AT2G01770.1 (AT2G01770.1 vacuolar iron transporter 1) HSP 1 Score: 380.2 bits (975), Expect = 9.8e-106 Identity = 196/244 (80.33%), Postives = 219/244 (89.75%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TAIR10
Match: AT1G21140.1 (AT1G21140.1 Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 50.1 bits (118), Expect = 2.3e-06 Identity = 57/217 (26.27%), Postives = 90/217 (41.47%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. TAIR10
Match: AT3G43660.1 (AT3G43660.1 Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06 Identity = 61/248 (24.60%), Postives = 94/248 (37.90%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. NCBI nr
Match: gi|778698101|ref|XP_004142309.2| (PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus]) HSP 1 Score: 429.9 bits (1104), Expect = 3.1e-117 Identity = 228/244 (93.44%), Postives = 234/244 (95.90%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. NCBI nr
Match: gi|659129452|ref|XP_008464694.1| (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo]) HSP 1 Score: 419.5 bits (1077), Expect = 4.2e-114 Identity = 222/240 (92.50%), Postives = 231/240 (96.25%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. NCBI nr
Match: gi|255573190|ref|XP_002527524.1| (PREDICTED: vacuolar iron transporter 1 isoform X1 [Ricinus communis]) HSP 1 Score: 397.1 bits (1019), Expect = 2.2e-107 Identity = 207/245 (84.49%), Postives = 225/245 (91.84%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. NCBI nr
Match: gi|743822647|ref|XP_011021748.1| (PREDICTED: vacuolar iron transporter 1-like [Populus euphratica]) HSP 1 Score: 397.1 bits (1019), Expect = 2.2e-107 Identity = 211/245 (86.12%), Postives = 223/245 (91.02%), Query Frame = 1
BLAST of Cp4.1LG01g07100 vs. NCBI nr
Match: gi|224108249|ref|XP_002314775.1| (integral membrane family protein [Populus trichocarpa]) HSP 1 Score: 396.7 bits (1018), Expect = 2.9e-107 Identity = 209/245 (85.31%), Postives = 225/245 (91.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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