CSPI05G00690 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAGACGAAAAGACAAAAAAAAAAGAAAAATGTTTGAGAGGATCGGAATCTCTCTCTTTTCAGTCCTCCGTCTCTGACACTTCACGGTTATATCAACACGAACCCCACGCCTTCGGCTTTCGCTTGCTCTTCCCCCCACGCCCCATTCCCATTACTTATTTTTCATTCAACCAACCTCCATCTTTTTCTCTCTTCACATCAATGCCTATGGCTATGCCTACTCACCACGACGACGCTCCACCACCAGTCCCCCTCGACCCTTACAAGCAATCTCTTCTCAACCGCCACACCGAGAATCACTTCACCGCAGGCGACATCGTCCGCGATATCATCATCGGCGTCTCTGACGGTCTCACCGTCCCTTTCGCCCTCGCCGCTGGTCTTTCCGGCGCAAACGCCTCTTCTTCTATTGTTCTCACAGCTGGAATCGCTGAAGTCGCAGCTGGCGCTATCTCGATGGGACTCGGCGGGTGCGTTTGTTAATTAATATTGGTTTCAATTTGGGAGGGTTTAGGGGTTTTTTAGAATGTTATATATATATATATATATATATGTTAGGTATCTTGCGGCGAAGAGTGAAGCGGATCATTATATGAGAGAATTGCGGAGAGAGCAAGAAGAAATCGTTGCAGTTCCCGATACTGGTAATTATTATAAATCCCTTTTCCATCTCTACTTTTTCTTTCTTTCTACACTCTCGTTCAAATCACATTCCTTTTCTTTACTCACTTCTTATTGTTTTTTCTTTTATAAAAAATTATTGCAACCCCCAAAATGGTTGAAATATTAGGATTCACTTCTAAAAATATTATCAATGATGATAGAATTTGGAAATTTCAAAAATCTAGTATTTTGTAAATCTTTCTATCTATCATTAATAAAATTTTAAATTTTACAATACTTTCTAAGTTACTTTCTTTCTACCCAATTCATCTGCTCAACAAAACTATTCTAATTACTAATTAGTATTTACATTTCCCCTAATGCCAAAATATTCCTTCCTATTTTCCTTTAATAATTCTTTCAAAACAAACTACTTTTTTTCCTACTTTTTTTTTAAACTACAATATTTAATCTATTGCTTATAATTCCATACATTGTATCTTTGGTGTTTTATATCTTAATTTGTTGAGATTTTCATGTGTTATTCATTAACTTACCCTGTCTCAATTTTTTTGGGTTGGTCCAAAAACTACCATCAACTCAATTCAACCTATACCATAAACTATAGTGTTTGGTAAAGGTTTACTGTGAGAGTAGTAGAAGTAGTTGGTACGAACACACACTTGAATTTTTTTAAAAAAAAAGGAAAAGAAAAAGAAAATTGTTGGGTAAAATTGAACGATAGATTTGAAAAGTGGTTGGTTAATAGTTTAAAATTACTATATCATTGTATTTTACATATAATAACTAAACGTACTATTATATAAGATTTAAAAATAATAGTTGTCGAGTTATGTGAGGAAAATACTAGAGATATATAATATACATTTTAAATCTGAACCAAAAAGTTTAAAAATGAAAATTAGAAATTAGAAATTTATTAAAAAGCAGAATCTGATTTTACAAAAAGCTAAAATCTTATGTAAGGAACTGAGTTTAGAAGTGATGGAAAATCAACATAGGTTGTGAAAGTGAATTTGATATATAAAAAAAATATTGTTTAACCAAACATAAATTAGGGTTAAAATTCTTTTTAAATCACTTTTAACTCTCTTGAAATCAATCTCAAATACACCTTATTCTCGAGTTTGGGAGTACTTTATATCTTGAAATTTTTTTATATAAAAAAATGTCTATCTTGAATTTTTATGAATAAATTTTCCAATATTTTGTAATAGATTTTTACCCTTTTATTATTTTGAGGATTTAAAGAATATCTGTTCCTTCTAAATTATTTTTCTAATTTTAATACCATATAATTATGTAAATTTATATAAAGAAATTTTATGGAACGTTTATTAAACCTGTTCTTAAAAACTATGTATTAAAAATGTGTGAAAATTTAGGGACCAATTCAAATTAAGTTTATAGAAAGCCTTTCTAAAAATTACAAAATTACTAATTTAACTTTGTTCTAAATTGTAATTAAATAACTGTGTTAGCTTATGTGCTTAAATTAAATGTACACTTGTAGTTATCATAATTTGAAAACTTTAATTTAGTCAGGGTTAAATATCTTCAATTATACTTTCTTTTGTCCATCTTTTTTTTCTTCGAAAGACATAGATACGAAAGTGTCTATGAACATGACTCAACTTTTTTTTTCTTTTAAGTATATGTTCTTCACAAATATAAACTGATATACACATAAAAGGTAAAACAATGTTCAATTCTTTGACAATCATTTGTAGAAGTTGGATTCCACCAAACCAAGAAGTATTGAAACTATAATATAAATAATAATTTAACCAAATACAAAAAAGTAGGAATTGTTTTGAAAGAGAGAAATTAATATTTTATAATGTTAGAAATCCAGAAGCAGCAGAAGTAGCAGAGATATTGGCACAGTACGGAATCGAACCACACGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAGGCTTGGTTGGATTTCATGATGAAGTAATTAAGTTCCATCTCTATCTCATTCTCCTTCAATTCCTTTTATACCATTTTTTTTCCTATCATAATCCTTTAGTTTCTTTATGCTTATTATTATTTACAACTGCTGAGCCATTGTCTAGTAATCAATTTGGCCTTGTTTGACAATCCTTTTGCTTTTTGGAAAAATATGTATGAAGGTTGTCCATGGAAATTAATGTCTAAGCCCAAAGGTGCCAAGCTCAATTGGGTTTAAGCGCTCCGAAAGGGAAAGTTAGCCCTTGAGTCCTTGACTAGTTGGGCAGAGCTCGTCCCATTTTATTGAAAAGGAAATGGTAGACTCGAGCTTACACTAGCATTCTACAACCTCGAGTTGTTACCCCCTACTCAACACTATCAAAATTGTACATACCCAAACGAGAGATCGACAGAGAGAATGAACCTTATAAATAGTCCCACAATAACAACATCGAAGGGTAAATATTCTCTTTATGCTCACCTAGGCTGAATGCATATATTTACTAACTTAGGCGTAAGAGTGTACTCTACCCAACATCACACTTGCGTTAGTAATTTGCACGTCAGCTTCAGCTTTAACGTGTTTAGACAAAAAAAAAAAAAAAAAGTGGTTGGCAGAGCAAAAAGTGTCTGGATGAGAGATACTTGAATTAACATTTGGCACCATTTCTAGGGACAACACGTCCAAGCAAGGCCTAATAGTGTGTATGGTTGGCAATTGAACAAGAAAAAATCCCAATGAGGAGGACATTGTCCTCCATGCCAGTGCAAATCACAACCAGAGCAAAGTTGACTCGACCCCCTAGTGAACGGTACACCCGTGAGGCAAAACCTTTGCAACCCACTTGTTCAGGTAATGACCTCAGGATCCCTGTTCTGCAACGAATTAGTCAATGAAAGCATGGGCCAATTCTCAAAAAGAGTCAAATACTTCTGCAGGCACCTTTTGATATTAAGGTCGGGCTGGTCTCATGAGGTACATAGGGAAGGCGTAGTAGCGTCTGACTGAATCCCATCTAGCTCTCCATGATTAAACTATATGTCTAGGACTCACTTAAGATATATGTAATATCAGTGAGTCAAAGTAGGTGTGGGTCTTGAGATTGTGAAATGTAAATTCTAGGCTTGGCATAGCATATATGAAGGGGTTTGACTTTCCTTTGGGTTGTGAGTGTTTGAGCCTTGAGCAACCCCTAAACATACAATGAAAAAGAAAAGAAAAAGCACATATAAATACAAAAGTAGCATTTATGAGTTTTCTATTATTAAGATTGGAGTTTTCCTCGAAAATCTAAGTAAGATATAGAAGTGAATAATTAATTTTATTTGACAGTATTGTTAGGCGGTGAGTTTATGTGGGTACCACAAATTTGTCTTCATATAAAAAAAATCGAAGGTTAGGTATGTAATAATAGTAATAGCCCCATCAATAATCCACTCCAAGTTACCCAGACTGCTGGGGTGAAAAACCATAACCGAACTAAACCAAACCAAACCGGTTGGTTTGGTACAATTTTCCTGAGAATTTTGGTTCATCAGTTCAAAAAGTGAGGTATTCGGTTGTATTGAAATCAAGGGGAAAGAGGAAAAAATGGTTAAAACCAAACCAAATTGTTGAGAATCGAAATTAGCTGGTTTGATTCGGATTTATGCCTATCATAACCAAGGTATTCGGTTTCATTTGACCAAAACCAAACCCAACGGTGCACACCCCTAACTGACTACTCCCATCCCACCAAGATAACTAACGTCACACCTCCTTATTTATTGTTTAGGAACTTTGTTTTATAAAATATTAAATTTGTAATTTATAGTGATAAGTTCTTAAACTTTAAAAATATCTAATAAGTTGGACTTCTTCTAAAGATTACATTTAGATTGACGATTACTATAACAATAGTAATTATGGTTATTGCAATAGTAACTAGTCATTACGATTCTTATGGTTATAATGATGGACATTACATATAAATATACATGAAGACCACAAACTTCTCTTGAAAACGTTAACAAAGGCTCACTCACATAACATCCGCACTATGGTTTGATCTAAGGTATTCTTCTATGAGTATCGTCGAAATCTAGGTATTCTTCTATTAGTATCATCGAAATGTTGTATCATCGAAATCAACATTGATACTCCAGCATTCATGACATACTTCTAATTGTACAACCAAAACTTAGAGTGAAATTTCTTACAATTTCAGAATGTTAGGTGAAATTGTGAAATCTAGGGTGTGAAATTGTGAAATCTAGGGTATGTTAGGGCCTTTCTATTAGAAAGCTCAAATTTTGTTTTTTGTTTTTCAAATTTATTTAGTTCAACAAATGTGTACCAAATAATCTAGTTTCTGTATTTGAAAATTGTTTTATGATTTTGTGATTTGCAAATCAATATTTTTAAAATTTTTAACATATGACGGTCATAAATTAAACAATAGTACTTTATATTAAACCTAATACTTAGCAGTAATCATATAACTAATTTTATAATTTATAAACATATTATTTAAAACAAGTGTTTAAATTAGAATCTCATTTCTTACTCTACTATCAAACATACATCTAAAACACATGAAAAAAAGACTTTTTTTATAGTTGAATGTCTTGTTTTGAAATTTTTATCTTCAGGTTTGGAGTACGATGATTTCTCAGTGATCCAATAGGTATTCACATCCTTATATAATCCATTGTAAAGCATGGGTAACTATCAATAACATACAGTTTTGTTTTTTGTTCAATTGGTGTCTTTATCCATTAAACTATTGAAATAGCTAACATGACATAATTTTGCTACTGTCTTTTGGATAAGCAGACAGGTGTAATTGTAAACAACGAAATCACTTTGTAATTGTCAAAGTGAATAAATTCTTTCTACATTTTGAATTTTGAGAATTTTCTAATTCTTATGTTTCATGTTCTACAATTTTCATGCTTATCCTACGTATGAAACTGTAACCAGTAAAATCAACCTAATTTACCTCCATAAATAAACCCCTATTTACATGAAATATAAGCAGCAGCAGTAGTGTAGTAGAGCCACCAATGGACAAATATAATTTCAACATTTACTCTTATGATTTAATCCTTATTACTGTTTGGGTTGGTTATGTAGGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTACAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGATTGGTGCCTCTCATTCCTTACATGTTTATTACAAACGTGACGAGAGCCGTGACCGCATCGGTTGCATTGACACTAGTAGCATTGCTCGTGTTCGGGTATGCGAAGGGTTACTTCACAGGTAACAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATTGGAGCTATTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGA ATGCCTATGGCTATGCCTACTCACCACGACGACGCTCCACCACCAGTCCCCCTCGACCCTTACAAGCAATCTCTTCTCAACCGCCACACCGAGAATCACTTCACCGCAGGCGACATCGTCCGCGATATCATCATCGGCGTCTCTGACGGTCTCACCGTCCCTTTCGCCCTCGCCGCTGGTCTTTCCGGCGCAAACGCCTCTTCTTCTATTGTTCTCACAGCTGGAATCGCTGAAGTCGCAGCTGGCGCTATCTCGATGGGACTCGGCGGGTATCTTGCGGCGAAGAGTGAAGCGGATCATTATATGAGAGAATTGCGGAGAGAGCAAGAAGAAATCGTTGCAGTTCCCGATACTGAAGCAGCAGAAGTAGCAGAGATATTGGCACAGTACGGAATCGAACCACACGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAGGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTACAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGATTGGTGCCTCTCATTCCTTACATGTTTATTACAAACGTGACGAGAGCCGTGACCGCATCGGTTGCATTGACACTAGTAGCATTGCTCGTGTTCGGGTATGCGAAGGGTTACTTCACAGGTAACAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATTGGAGCTATTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGA ATGCCTATGGCTATGCCTACTCACCACGACGACGCTCCACCACCAGTCCCCCTCGACCCTTACAAGCAATCTCTTCTCAACCGCCACACCGAGAATCACTTCACCGCAGGCGACATCGTCCGCGATATCATCATCGGCGTCTCTGACGGTCTCACCGTCCCTTTCGCCCTCGCCGCTGGTCTTTCCGGCGCAAACGCCTCTTCTTCTATTGTTCTCACAGCTGGAATCGCTGAAGTCGCAGCTGGCGCTATCTCGATGGGACTCGGCGGGTATCTTGCGGCGAAGAGTGAAGCGGATCATTATATGAGAGAATTGCGGAGAGAGCAAGAAGAAATCGTTGCAGTTCCCGATACTGAAGCAGCAGAAGTAGCAGAGATATTGGCACAGTACGGAATCGAACCACACGAGTATGGTCCAGTTGTGAATGCTCTTAGGAAGAGGCCTCAGGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTACAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGATTGGTGCCTCTCATTCCTTACATGTTTATTACAAACGTGACGAGAGCCGTGACCGCATCGGTTGCATTGACACTAGTAGCATTGCTCGTGTTCGGGTATGCGAAGGGTTACTTCACAGGTAACAAGCCCTTTAAAAGTGCCATCCAAACCACCCTCATTGGAGCTATTGCGTCTGCAGCTGCTTTTGGCATGGCCAAGGCTATACAACAATGA
BLAST of CSPI05G00690 vs. Swiss-Prot
Match: VIT1_ARATH (Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 1.3e-102 Identity = 192/245 (78.37%), Postives = 217/245 (88.57%), Query Frame = 1
BLAST of CSPI05G00690 vs. Swiss-Prot
Match: VIT11_ORYSJ (Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.8e-96 Identity = 173/228 (75.88%), Postives = 207/228 (90.79%), Query Frame = 1
BLAST of CSPI05G00690 vs. Swiss-Prot
Match: VIT12_ORYSJ (Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=2) HSP 1 Score: 349.7 bits (896), Expect = 2.6e-95 Identity = 178/230 (77.39%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of CSPI05G00690 vs. Swiss-Prot
Match: CCC1_YEAST (Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCC1 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 8.3e-33 Identity = 83/223 (37.22%), Postives = 133/223 (59.64%), Query Frame = 1
BLAST of CSPI05G00690 vs. Swiss-Prot
Match: PCL1_SCHPO (Fe(2+)/Mn(2+) transporter pcl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pcl1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.8e-10 Identity = 54/206 (26.21%), Postives = 105/206 (50.97%), Query Frame = 1
BLAST of CSPI05G00690 vs. TrEMBL
Match: A0A0A0KJ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 1.5e-134 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of CSPI05G00690 vs. TrEMBL
Match: B9SNF5_RICCO (Protein CCC1, putative OS=Ricinus communis GN=RCOM_1148480 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 2.7e-107 Identity = 206/239 (86.19%), Postives = 222/239 (92.89%), Query Frame = 1
BLAST of CSPI05G00690 vs. TrEMBL
Match: A9PFY9_POPTR (Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0010s11480g PE=2 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 2.3e-106 Identity = 205/238 (86.13%), Postives = 221/238 (92.86%), Query Frame = 1
BLAST of CSPI05G00690 vs. TrEMBL
Match: A9PEU8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 6.7e-106 Identity = 206/238 (86.55%), Postives = 219/238 (92.02%), Query Frame = 1
BLAST of CSPI05G00690 vs. TrEMBL
Match: V4U611_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016475mg PE=4 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-105 Identity = 201/236 (85.17%), Postives = 219/236 (92.80%), Query Frame = 1
BLAST of CSPI05G00690 vs. TAIR10
Match: AT2G01770.1 (AT2G01770.1 vacuolar iron transporter 1) HSP 1 Score: 374.0 bits (959), Expect = 7.3e-104 Identity = 192/245 (78.37%), Postives = 217/245 (88.57%), Query Frame = 1
BLAST of CSPI05G00690 vs. TAIR10
Match: AT1G21140.1 (AT1G21140.1 Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 51.6 bits (122), Expect = 8.3e-07 Identity = 57/217 (26.27%), Postives = 90/217 (41.47%), Query Frame = 1
BLAST of CSPI05G00690 vs. NCBI nr
Match: gi|778698101|ref|XP_004142309.2| (PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus]) HSP 1 Score: 486.9 bits (1252), Expect = 2.2e-134 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of CSPI05G00690 vs. NCBI nr
Match: gi|659129452|ref|XP_008464694.1| (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo]) HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-124 Identity = 240/251 (95.62%), Postives = 243/251 (96.81%), Query Frame = 1
BLAST of CSPI05G00690 vs. NCBI nr
Match: gi|255573190|ref|XP_002527524.1| (PREDICTED: vacuolar iron transporter 1 isoform X1 [Ricinus communis]) HSP 1 Score: 396.4 bits (1017), Expect = 3.9e-107 Identity = 206/239 (86.19%), Postives = 222/239 (92.89%), Query Frame = 1
BLAST of CSPI05G00690 vs. NCBI nr
Match: gi|743822647|ref|XP_011021748.1| (PREDICTED: vacuolar iron transporter 1-like [Populus euphratica]) HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-106 Identity = 207/238 (86.97%), Postives = 220/238 (92.44%), Query Frame = 1
BLAST of CSPI05G00690 vs. NCBI nr
Match: gi|224108249|ref|XP_002314775.1| (integral membrane family protein [Populus trichocarpa]) HSP 1 Score: 393.3 bits (1009), Expect = 3.3e-106 Identity = 205/238 (86.13%), Postives = 221/238 (92.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|