CmoCh04G011140 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTCGCGGCCACGGCAACACGCATCTCACAGTTCGACCGTTCGCATTCCATTTTCATTTCCTTCTCTTAATACTCTACTGAAGTTCCACTTTCTCTCTGCATCAATGGCGGACGGCTCTACACCAATCCACCTGGATCCTCACAAGCAGGCTCTTCTCAACCACCACACCGAGAAGCACTTCACCGCCGGCGAGATCGTCCGTGATATCATCATCGGCGTCTCCGACGGCCTCACTGTTCCTTTTGCCCTCGCCGCAGGACTTTCCGGCGCCAATGCCTCTTCCTCCATCGTCCTCACCGCCGGTATCGCTGAAGTCGCTGCCGGCGCTATCTCCATGGGACTCGGCGGGTGCGACTCTCTCTCTCTCTCTCTTAATCACCGCCATTGACTTTCCGTTTACCTAGAAAAATGTCGCGCAATTAACATTGAACTTGATCGTTTTCGATATCCAAAATTTTGCTGGAGCATTGAGTCGGTTCTAGTATAGAAATTGAATCTGAGTTTTTCTGTAATACTGAACCGAATCGTCCTTCATTTCGCATTTGTATTTTGTGTTTGTGTAGATATCTTGCGGCGAAGAGCGAAGCGGATCACTATATGAGAGAACTGCGGAGAGAGCAAGAAGAAATCGTCGCGGTTCCCGATACTGGTACAGATTGATCAACTCTTTTCTTTTTTTCCTTTTTTTTCCTTTTTTCATTCCTTTTTAGAGTTTCATTTTAGATTTCTTACTGAAATGAAATTAGGATGAATATGAACAAAACATTTCGTAAATGGTAAGTTAATTCGGAATAAGATTTGTTGTTCAATATGGCTTAAGGGTAGTTTGGGCATATGCTTAAAGAACGGCTTTTCCACGAAAAAAATTGGGATTTCTGTCAAAATATTTGTTTTAAGGTTAAATTATTAAATAACACTTCGGTCAATTTTGCCCTTTTATTCTTTCAAAAATTACAAACCTTTCATATACATTTTTAAAAATATTTAGACAAAAAATTATGATTTAAAATATTGCAAACCTTGTGTCATGTGTCAATCAGCTCATATCTGATTAAAATACGTGTCCTAACCAGTGGTGAATCCCTGTAGTTGAATTAGAAAAACGCTAAAACAATATTCAATTTCTACTTTTTGAAGATCAATCCAACAAACTCATTTGAATTTAAAACTTTTTTTTTAGTATGATAGAATGGGAGGTTAATATGTGATTAATTCGGAATGAAAGGGTTCACTTTGACCGTTAAGAGTAGGTAACCCGTTCCGTTCATGTGTCTTTGTTTCTATTGCATTCTATCTCATCGTATCAAATTCTATTCTGCAATATTTGAAAATCACCGTCAATACTTCGGTGTAGGTCCGGGATAATCCTTTGTTCCACAGTCTGGGTCTATTTACAACTAGCCAATTAAGAATTCTTAGATGTACTAGTACTAGCAAGTGCATCTTTGATGCAGTTATCGATTCTCTCGAGAGATCACAATTACCGTGAACAAACATATTAATGACGAGGAATACAATTTTGTTATTCTATTAAATACTTCGTCTTCTGAAAGAATTTTATTTGGCAATATAAATGCAGAAGCGGCAGAAGTAGCAGAGATATTGGCACGGTATGGGATTGAACCCCATGAATATGCTCCAGTTGTGAATGCTCTTAGGAAGAGACCTCAAGCTTGGTTGGATTTCATGATGAAGTAAGTTCTCTTTCTCCTCCTTTAGCTGTGATACCATTTTATAATTATTTCATTTTTTGTTTTCTGTTTAATAAGATTGATATTTTCCTTTATTAAAATCCATATAAGATATAGACGTGAATATTTTATTTAATATTCTTAGGCGGTGTGTTTATCTCGATCCCAGAAATTTGTCTCATATAGAAAGCAAAGGTTAGCGCTTTGTAATAATAATGCCCATCTATAATCCATTTGAAGTTTCCAGCCTTTTCTAACTTAAATGTTCACTGCTGCCACCCAAGAAGATACTGACATCACTATTTTCAGCTGCTTCCTCTTACCTCCAAAACCCAATATCAAAAGGGTGGTTTTACAAAACTCTTATTCGTTTCAGAGTCGTGAGGGGAAACTCGAAAAAAAAAGCCTAAAGAGGACAATATCTGCTAGCAGTGGGTTCCGGTTGTTACATTTTTTTTTTTCTTCAAATTACAAATTTAGTAGTTAATTTTATTTTTATTGTCACTTTAAACTTTACAATAAGTTCATCATATTCAAAAGACAAGTTTAGAAAGTATTATTATCAAGGATGAGTTTAGCAAACAGTATAGTTTCAGGTTCGGTTCATGATTTAATCCGTCAACTGTTTGTGTGGTGTGGTGATGTAGATTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCACTCACAATTGCATTGGCTTACATATTGGGGGGGCTGGTGCCGCTCATTCCTTACATGTTTATTGCAAATGCAACCAGAGCAGTGACAGCATCAGTTGCATTGACACTATTAGCGCTGCTCGTTTTCGGGTATGCAAAGGGTTACTTCACAGGTAATAAGCCCTTTCAAAGTGCCATCCAAACCACCCTTATCGGAGCCATCGCATCTGCCGCTGCTTTTGGCATGGCCAAGGCTATACAACTGTGAATTAACCCGCCCCCATGTCAATATCTAATAAGAGTATCCCCCCCTAAGGCCACGTTTTTAGTCTAATCTCATAAGATGAGTCTAAAACTTTTGCCAGTTTTCTCAGTTCAGGTCTAGAAATGAACATTTGATGCGGATCTTAGAACATTAAAACATCTTTTTCAATCCTTGAAGTGTTTGGTTTGGTATAATGCTTGAAAGTTGAAACAAAAGTATTACCTTGCGGCATCACCAAGAAAAAGATGGTTGAAATTCTATAAACCTGTCTGAAACTCATTACTCTA AGTTCGCGGCCACGGCAACACGCATCTCACAGTTCGACCGTTCGCATTCCATTTTCATTTCCTTCTCTTAATACTCTACTGAAGTTCCACTTTCTCTCTGCATCAATGGCGGACGGCTCTACACCAATCCACCTGGATCCTCACAAGCAGGCTCTTCTCAACCACCACACCGAGAAGCACTTCACCGCCGGCGAGATCGTCCGTGATATCATCATCGGCGTCTCCGACGGCCTCACTGTTCCTTTTGCCCTCGCCGCAGGACTTTCCGGCGCCAATGCCTCTTCCTCCATCGTCCTCACCGCCGGTATCGCTGAAGTCGCTGCCGGCGCTATCTCCATGGGACTCGGCGGATATCTTGCGGCGAAGAGCGAAGCGGATCACTATATGAGAGAACTGCGGAGAGAGCAAGAAGAAATCGTCGCGGTTCCCGATACTGAAGCGGCAGAAGTAGCAGAGATATTGGCACGGTATGGGATTGAACCCCATGAATATGCTCCAGTTGTGAATGCTCTTAGGAAGAGACCTCAAGCTTGGTTGGATTTCATGATGAAATTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCACTCACAATTGCATTGGCTTACATATTGGGGGGGCTGGTGCCGCTCATTCCTTACATGTTTATTGCAAATGCAACCAGAGCAGTGACAGCATCAGTTGCATTGACACTATTAGCGCTGCTCGTTTTCGGGTATGCAAAGGGTTACTTCACAGGTAATAAGCCCTTTCAAAGTGCCATCCAAACCACCCTTATCGGAGCCATCGCATCTGCCGCTGCTTTTGGCATGGCCAAGGCTATACAACTGTGAATTAACCCGCCCCCATGTCAATATCTAATAAGAGTATCCCCCCCTAAGGCCACGTTTTTAGTCTAATCTCATAAGATGAGTCTAAAACTTTTGCCAGTTTTCTCAGTTCAGGTCTAGAAATGAACATTTGATGCGGATCTTAGAACATTAAAACATCTTTTTCAATCCTTGAAGTGTTTGGTTTGGTATAATGCTTGAAAGTTGAAACAAAAGTATTACCTTGCGGCATCACCAAGAAAAAGATGGTTGAAATTCTATAAACCTGTCTGAAACTCATTACTCTA ATGGCGGACGGCTCTACACCAATCCACCTGGATCCTCACAAGCAGGCTCTTCTCAACCACCACACCGAGAAGCACTTCACCGCCGGCGAGATCGTCCGTGATATCATCATCGGCGTCTCCGACGGCCTCACTGTTCCTTTTGCCCTCGCCGCAGGACTTTCCGGCGCCAATGCCTCTTCCTCCATCGTCCTCACCGCCGGTATCGCTGAAGTCGCTGCCGGCGCTATCTCCATGGGACTCGGCGGATATCTTGCGGCGAAGAGCGAAGCGGATCACTATATGAGAGAACTGCGGAGAGAGCAAGAAGAAATCGTCGCGGTTCCCGATACTGAAGCGGCAGAAGTAGCAGAGATATTGGCACGGTATGGGATTGAACCCCATGAATATGCTCCAGTTGTGAATGCTCTTAGGAAGAGACCTCAAGCTTGGTTGGATTTCATGATGAAATTTGAATTAGGATTGGAAAAGCCAGATCCTAGAAGAGCTCTGCAAAGTGCACTCACAATTGCATTGGCTTACATATTGGGGGGGCTGGTGCCGCTCATTCCTTACATGTTTATTGCAAATGCAACCAGAGCAGTGACAGCATCAGTTGCATTGACACTATTAGCGCTGCTCGTTTTCGGGTATGCAAAGGGTTACTTCACAGGTAATAAGCCCTTTCAAAGTGCCATCCAAACCACCCTTATCGGAGCCATCGCATCTGCCGCTGCTTTTGGCATGGCCAAGGCTATACAACTGTGA
BLAST of CmoCh04G011140 vs. Swiss-Prot
Match: VIT1_ARATH (Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.7e-104 Identity = 196/244 (80.33%), Postives = 219/244 (89.75%), Query Frame = 1
BLAST of CmoCh04G011140 vs. Swiss-Prot
Match: VIT11_ORYSJ (Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 1.2e-97 Identity = 177/243 (72.84%), Postives = 214/243 (88.07%), Query Frame = 1
BLAST of CmoCh04G011140 vs. Swiss-Prot
Match: VIT12_ORYSJ (Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=2) HSP 1 Score: 348.6 bits (893), Expect = 5.6e-95 Identity = 182/237 (76.79%), Postives = 208/237 (87.76%), Query Frame = 1
BLAST of CmoCh04G011140 vs. Swiss-Prot
Match: CCC1_YEAST (Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCC1 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 6.8e-32 Identity = 81/223 (36.32%), Postives = 132/223 (59.19%), Query Frame = 1
BLAST of CmoCh04G011140 vs. Swiss-Prot
Match: PCL1_SCHPO (Fe(2+)/Mn(2+) transporter pcl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pcl1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.3e-10 Identity = 55/216 (25.46%), Postives = 112/216 (51.85%), Query Frame = 1
BLAST of CmoCh04G011140 vs. TrEMBL
Match: A0A0A0KJ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 2.1e-117 Identity = 227/244 (93.03%), Postives = 234/244 (95.90%), Query Frame = 1
BLAST of CmoCh04G011140 vs. TrEMBL
Match: A9PFY9_POPTR (Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0010s11480g PE=2 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 9.0e-108 Identity = 209/245 (85.31%), Postives = 225/245 (91.84%), Query Frame = 1
BLAST of CmoCh04G011140 vs. TrEMBL
Match: B9SNF5_RICCO (Protein CCC1, putative OS=Ricinus communis GN=RCOM_1148480 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 2.0e-107 Identity = 206/245 (84.08%), Postives = 225/245 (91.84%), Query Frame = 1
BLAST of CmoCh04G011140 vs. TrEMBL
Match: A9PEU8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 2.6e-107 Identity = 210/245 (85.71%), Postives = 223/245 (91.02%), Query Frame = 1
BLAST of CmoCh04G011140 vs. TrEMBL
Match: A0A0J8BVU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g185590 PE=4 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-105 Identity = 203/236 (86.02%), Postives = 219/236 (92.80%), Query Frame = 1
BLAST of CmoCh04G011140 vs. TAIR10
Match: AT2G01770.1 (AT2G01770.1 vacuolar iron transporter 1) HSP 1 Score: 380.2 bits (975), Expect = 9.8e-106 Identity = 196/244 (80.33%), Postives = 219/244 (89.75%), Query Frame = 1
BLAST of CmoCh04G011140 vs. TAIR10
Match: AT1G21140.1 (AT1G21140.1 Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06 Identity = 56/217 (25.81%), Postives = 90/217 (41.47%), Query Frame = 1
BLAST of CmoCh04G011140 vs. NCBI nr
Match: gi|778698101|ref|XP_004142309.2| (PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus]) HSP 1 Score: 429.9 bits (1104), Expect = 3.1e-117 Identity = 227/244 (93.03%), Postives = 234/244 (95.90%), Query Frame = 1
BLAST of CmoCh04G011140 vs. NCBI nr
Match: gi|659129452|ref|XP_008464694.1| (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo]) HSP 1 Score: 421.0 bits (1081), Expect = 1.4e-114 Identity = 222/240 (92.50%), Postives = 231/240 (96.25%), Query Frame = 1
BLAST of CmoCh04G011140 vs. NCBI nr
Match: gi|743822647|ref|XP_011021748.1| (PREDICTED: vacuolar iron transporter 1-like [Populus euphratica]) HSP 1 Score: 398.3 bits (1022), Expect = 9.9e-108 Identity = 211/245 (86.12%), Postives = 223/245 (91.02%), Query Frame = 1
BLAST of CmoCh04G011140 vs. NCBI nr
Match: gi|224108249|ref|XP_002314775.1| (integral membrane family protein [Populus trichocarpa]) HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107 Identity = 209/245 (85.31%), Postives = 225/245 (91.84%), Query Frame = 1
BLAST of CmoCh04G011140 vs. NCBI nr
Match: gi|255573190|ref|XP_002527524.1| (PREDICTED: vacuolar iron transporter 1 isoform X1 [Ricinus communis]) HSP 1 Score: 396.7 bits (1018), Expect = 2.9e-107 Identity = 206/245 (84.08%), Postives = 225/245 (91.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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