Lsi03G008200 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G008200
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionDNA binding transcription factor
Locationchr03 : 12431968 .. 12432768 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGTGGTGTCGGTGCAGGCCAATTACCATATTCTAATCCTTACCAAACAGCTTCGATGGTGGCTTCCGGGACTCCTGCTATTACGATTCCCCCAACTCAGCCACCGTCCAGTTTCTCTAATTCTCCCCACCAGCTTGCCTACCAGCAGGCTCAGCACTTCCACCACCAGCAACAGCAACAACAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCCGTCATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCAATTTCAAGGACCGATGTCTTCGATTTCTTGGTTGATATCATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACAAAAGGTTCCATTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGGTGGGTGCTACAGGAATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGGCACTGCTCAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATGCTCAACCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAG

mRNA sequence

ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGTGGTGTCGGTGCAGGCCAATTACCATATTCTAATCCTTACCAAACAGCTTCGATGGTGGCTTCCGGGACTCCTGCTATTACGATTCCCCCAACTCAGCCACCGTCCAGTTTCTCTAATTCTCCCCACCAGCTTGCCTACCAGCAGGCTCAGCACTTCCACCACCAGCAACAGCAACAACAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCCGTCATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCAATTTCAAGGACCGATGTCTTCGATTTCTTGGTTGATATCATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACAAAAGGTTCCATTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGGTGGGTGCTACAGGAATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGGCACTGCTCAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATGCTCAACCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAG

Coding sequence (CDS)

ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGTGGTGTCGGTGCAGGCCAATTACCATATTCTAATCCTTACCAAACAGCTTCGATGGTGGCTTCCGGGACTCCTGCTATTACGATTCCCCCAACTCAGCCACCGTCCAGTTTCTCTAATTCTCCCCACCAGCTTGCCTACCAGCAGGCTCAGCACTTCCACCACCAGCAACAGCAACAACAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCCGTCATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCAATTTCAAGGACCGATGTCTTCGATTTCTTGGTTGATATCATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACAAAAGGTTCCATTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGGTGGGTGCTACAGGAATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGGCACTGCTCAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATGCTCAACCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAG

Protein sequence

MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGGTAQQPRPSMPFMPWPHAQPQQQQQTQQQSDA
Homology
[Close]
BLAST of Lsi03G008200 vs. Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 6.3e-68
Identity = 150/214 (70.09%), Postives = 161/214 (75.23%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPPTQPPSSFSNSPH 60
           M+QSE  Q QQQ          G + Y                  +PP    S   N+  
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDY------------------VPPHAYQSGPVNAAS 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
            +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKGSIP-VVGSPADLPYYYVPSQ 214
           RDELKEEGLG+TKG+IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]
BLAST of Lsi03G008200 vs. Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.6e-57
Identity = 144/260 (55.38%), Postives = 170/260 (65.38%), Query Frame = 1 

Query: 11  QQSQQPAGGVGAGQLPY-SNPYQTASMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQH 70
           QQ    +G +  G  PY +NP  T +   +G  A               P QLA+ Q   
Sbjct: 3   QQDHGQSGAMNYGTNPYQTNPMSTTAATVAGGAA--------------QPGQLAFHQI-- 62

Query: 71  FHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 130
             HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAP
Sbjct: 63  --HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 122

Query: 131 VIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 190
           V+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E
Sbjct: 123 VVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDE 182

Query: 191 GLG-ITKGSIPVVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGGTAQQPRPSMP 250
            LG I +G++P   + A  PY Y+P+   P+G  GM+MG          G A  P P M 
Sbjct: 183 VLGSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMGNP--------GGAYPPNPYM- 228

Query: 251 FMPWPHAQPQQQQQTQQQSD 266
                  QP  QQQ   Q D
Sbjct: 243 ------GQPMWQQQAPDQPD 228

[Close]
BLAST of Lsi03G008200 vs. Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-54
Identity = 114/183 (62.30%), Postives = 137/183 (74.86%), Query Frame = 1 

Query: 43  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNH 102
           A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH
Sbjct: 12  AAGIPPPPPGTTISAAGGGASY-------HHLLQQQQQQLQLFWTYQRQEIEQVNDFKNH 71

Query: 103 SLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDI 162
            LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDI
Sbjct: 72  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 131

Query: 163 AAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMI 222
           AAAI+RTD+FDFLVDI+PRDE+K+E   +  G + V  + + +PYYY P   P G  GM+
Sbjct: 132 AAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMM 186

Query: 223 MGK 226
           +G+
Sbjct: 192 IGR 186

[Close]
BLAST of Lsi03G008200 vs. Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.9e-54
Identity = 136/248 (54.84%), Postives = 156/248 (62.90%), Query Frame = 1 

Query: 11  QQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 70
           QQ Q  A   G      SNPYQT +M            T P  S   + HQ+        
Sbjct: 3   QQGQSSAMNYG------SNPYQTNAMT-----------TTPTGSDHPAYHQI-------- 62

Query: 71  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 130
           H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 131 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 190
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 191 ITKGSIPVVGSPADLPYYYV-PSQHPVGATGMIMGKQLDQANMYGGTAQQPRPSMPFMPW 250
              G      + A  PY Y+ P   P+G  GM+MG            A  P P M    W
Sbjct: 183 ---GVGAEAATAAGYPYGYLPPGTAPIGNPGMVMGNP---------GAYPPNPYMGQPMW 213

Query: 251 PHAQPQQQ 258
               P+QQ
Sbjct: 243 QQPGPEQQ 213

[Close]
BLAST of Lsi03G008200 vs. Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.3e-52
Identity = 120/209 (57.42%), Postives = 144/209 (68.90%), Query Frame = 1 

Query: 35  SMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIE 94
           S+   G+   T+ P  P  S S     +       +HH   QQQQQQLQMFW  Q QEIE
Sbjct: 16  SVYPPGSAVTTVIPPPPSGSAS-----IVTGGGATYHHLL-QQQQQQLQMFWTYQRQEIE 75

Query: 95  QTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKR 154
           Q  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKR
Sbjct: 76  QVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKR 135

Query: 155 RTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE--GLGITKGSIPVVGSPADLPYYYVPS 214
           RTLQKNDIAAAI+RTD+FDFLVDI+PR+E+KEE        G   V  + + +PYYY P 
Sbjct: 136 RTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPM 195

Query: 215 QHPVGATGMIMGK-QLDQANMYGGTAQQP 241
             P    GM++G+  +D + +Y   AQ P
Sbjct: 196 GQPAVPGGMMIGRPAMDPSGVY---AQPP 215

[Close]
BLAST of Lsi03G008200 vs. TrEMBL
Match: A0A0A0K5U1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 3.1e-138
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQL YSNPYQTA MVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGGTAQQP 240
           RDELKEEGLGITK S+PVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYG TAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHAQPQQQQQTQQQSD 266
           RPSMPFMPWPH QPQQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]
BLAST of Lsi03G008200 vs. TrEMBL
Match: B9RHZ1_RICCO (Ccaat-binding transcription factor, putative OS=Ricinus communis GN=RCOM_1574650 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.4e-113
Identity = 230/272 (84.56%), Postives = 240/272 (88.24%), Query Frame = 1 

Query: 1   MDQSERSQHQQQ-SQQPAGGV--GAGQLPYSN-PYQTASMVASGTPAITIP-PTQPPSSF 60
           MDQSE+ Q QQQ SQQP  GV  GAGQ+ YS  PYQT +M+ASG PAI +P PTQPPSSF
Sbjct: 1   MDQSEQGQQQQQQSQQPVMGVVAGAGQMAYSTAPYQTTAMMASGAPAIAVPSPTQPPSSF 60

Query: 61  SNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKA 120
           SNSPHQL YQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQT DFKNHSLPLARIKKIMKA
Sbjct: 61  SNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTMDFKNHSLPLARIKKIMKA 120

Query: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180
           DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL
Sbjct: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180

Query: 181 VDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGG 240
           VDIIPRDELKEEGLG+TK +IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA  YGG
Sbjct: 181 VDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAGYGG 240

Query: 241 TAQQPRPSMPFMPWPHAQPQQQQQ--TQQQSD 266
             QQPRP M FMPWP  QPQQQQQ   QQQSD
Sbjct: 241 -QQQPRPPMAFMPWPQTQPQQQQQQPQQQQSD 271

[Close]
BLAST of Lsi03G008200 vs. TrEMBL
Match: A0A061FB94_THECC (Nuclear transcription factor Y subunit C-2 isoform 1 OS=Theobroma cacao GN=TCM_033437 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.3e-112
Identity = 228/278 (82.01%), Postives = 243/278 (87.41%), Query Frame = 1 

Query: 1   MDQSERSQ--------HQQQSQQPAGGV--GAGQLPYSN-PYQTASMVASGTPAITIP-P 60
           MDQSE++Q        HQQ  QQP  GV  GAGQ+ YS  PY TASMVASGTPA+ +P P
Sbjct: 1   MDQSEQTQQQHQHQQQHQQHQQQPVMGVVPGAGQMGYSTGPYHTASMVASGTPAVAVPSP 60

Query: 61  TQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR 120
           TQPP++FS+SPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR
Sbjct: 61  TQPPTTFSSSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR 120

Query: 121 IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR 180
           IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR
Sbjct: 121 IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR 180

Query: 181 TDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLD 240
           TDVFDFLVDIIPRDELKEEGLG+TK +IP+VGSPAD+PYYYVP QHPVG TGMIMGK +D
Sbjct: 181 TDVFDFLVDIIPRDELKEEGLGVTKATIPLVGSPADIPYYYVP-QHPVGPTGMIMGKPVD 240

Query: 241 QANMYGGTAQQPRPSMPFMPWPHAQPQQQQQTQQQSDA 267
           QA +Y G  QQ RP M FMPWP  QPQQQQ  QQQSD+
Sbjct: 241 QATLYPG--QQARPPMAFMPWPQGQPQQQQSQQQQSDS 275

[Close]
BLAST of Lsi03G008200 vs. TrEMBL
Match: A0A067JQF0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22608 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.7e-110
Identity = 221/273 (80.95%), Postives = 239/273 (87.55%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQ----PAGGV--GAGQLPYSN-PYQTASMVASGTPAITIPP-TQPP 60
           MDQSE++Q QQQ QQ    P  GV  GA Q+ Y+  PYQTA M+ASGTPA+ +P  TQ P
Sbjct: 1   MDQSEQTQQQQQQQQSQQLPVMGVVAGAAQMAYTTTPYQTAGMMASGTPAMAVPSSTQAP 60

Query: 61  SSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKI 120
           S++SNSPHQL YQQAQHFHHQQQQQQQQQLQMFWANQMQE+EQTTDFKNHSLPLARIKKI
Sbjct: 61  STYSNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEVEQTTDFKNHSLPLARIKKI 120

Query: 121 MKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180
           MKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF
Sbjct: 121 MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180

Query: 181 DFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANM 240
           DFLVDIIPRDELKEEGLG+TK +IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA +
Sbjct: 181 DFLVDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAV 240

Query: 241 YGGTAQQPRPSMPFMPWPHAQPQQQQQTQQQSD 266
           YG  AQQPRP + FMPWP  QPQQQQ  QQQSD
Sbjct: 241 YG--AQQPRPPVAFMPWPQNQPQQQQPQQQQSD 271

[Close]
BLAST of Lsi03G008200 vs. TrEMBL
Match: W9QHS7_9ROSA (Nuclear transcription factor Y subunit C-2 OS=Morus notabilis GN=L484_004059 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.7e-110
Identity = 219/264 (82.95%), Postives = 231/264 (87.50%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPP-TQPPSSFSNSP 60
           MDQSE++Q QQQ QQP  G+ AG  P S  YQTA MVASG PA  +P  TQ P++FSNSP
Sbjct: 1   MDQSEQTQQQQQQQQPVVGMVAGYAPQS--YQTAPMVASGAPAAPVPSQTQAPATFSNSP 60

Query: 61  HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDV 120
           HQLAYQQAQHFHHQQQQQQQQQLQMFW NQMQEIEQT DFKNHSLPLARIKKIMKADEDV
Sbjct: 61  HQLAYQQAQHFHHQQQQQQQQQLQMFWVNQMQEIEQTADFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 180
           RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII
Sbjct: 121 RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 180

Query: 181 PRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGGTAQQ 240
           PRDELKEEGLG+TK ++PVVGSPAD+PYYYVP QHPVG TGMIMGK +DQA MY   AQQ
Sbjct: 181 PRDELKEEGLGVTKATLPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAAMY--AAQQ 240

Query: 241 PRPSMPFMPWPHAQPQQQQQTQQQ 264
           PRP M F+PWP  QPQQQQQ Q Q
Sbjct: 241 PRPPMAFVPWPQTQPQQQQQQQPQ 260

[Close]
BLAST of Lsi03G008200 vs. TAIR10
Match: AT1G56170.1 (AT1G56170.1 nuclear factor Y, subunit C2)

HSP 1 Score: 258.8 bits (660), Expect = 3.6e-69
Identity = 150/214 (70.09%), Postives = 161/214 (75.23%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPPTQPPSSFSNSPH 60
           M+QSE  Q QQQ          G + Y                  +PP    S   N+  
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDY------------------VPPHAYQSGPVNAAS 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
            +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKGSIP-VVGSPADLPYYYVPSQ 214
           RDELKEEGLG+TKG+IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]
BLAST of Lsi03G008200 vs. TAIR10
Match: AT1G08970.4 (AT1G08970.4 nuclear factor Y, subunit C9)

HSP 1 Score: 221.9 bits (564), Expect = 4.8e-58
Identity = 144/260 (55.38%), Postives = 170/260 (65.38%), Query Frame = 1 

Query: 11  QQSQQPAGGVGAGQLPY-SNPYQTASMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQH 70
           QQ    +G +  G  PY +NP  T +   +G  A               P QLA+ Q   
Sbjct: 3   QQDHGQSGAMNYGTNPYQTNPMSTTAATVAGGAA--------------QPGQLAFHQI-- 62

Query: 71  FHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 130
             HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAP
Sbjct: 63  --HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 122

Query: 131 VIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 190
           V+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E
Sbjct: 123 VVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDE 182

Query: 191 GLG-ITKGSIPVVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGGTAQQPRPSMP 250
            LG I +G++P   + A  PY Y+P+   P+G  GM+MG          G A  P P M 
Sbjct: 183 VLGSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMGNP--------GGAYPPNPYM- 228

Query: 251 FMPWPHAQPQQQQQTQQQSD 266
                  QP  QQQ   Q D
Sbjct: 243 ------GQPMWQQQAPDQPD 228

[Close]
BLAST of Lsi03G008200 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1)

HSP 1 Score: 214.5 bits (545), Expect = 7.7e-56
Identity = 114/183 (62.30%), Postives = 137/183 (74.86%), Query Frame = 1 

Query: 43  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNH 102
           A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH
Sbjct: 12  AAGIPPPPPGTTISAAGGGASY-------HHLLQQQQQQLQLFWTYQRQEIEQVNDFKNH 71

Query: 103 SLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDI 162
            LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDI
Sbjct: 72  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 131

Query: 163 AAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMI 222
           AAAI+RTD+FDFLVDI+PRDE+K+E   +  G + V  + + +PYYY P   P G  GM+
Sbjct: 132 AAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMM 186

Query: 223 MGK 226
           +G+
Sbjct: 192 IGR 186

[Close]
BLAST of Lsi03G008200 vs. TAIR10
Match: AT1G54830.2 (AT1G54830.2 nuclear factor Y, subunit C3)

HSP 1 Score: 211.8 bits (538), Expect = 5.0e-55
Identity = 136/248 (54.84%), Postives = 156/248 (62.90%), Query Frame = 1 

Query: 11  QQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 70
           QQ Q  A   G      SNPYQT +M            T P  S   + HQ+        
Sbjct: 3   QQGQSSAMNYG------SNPYQTNAMT-----------TTPTGSDHPAYHQI-------- 62

Query: 71  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 130
           H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 131 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 190
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 191 ITKGSIPVVGSPADLPYYYV-PSQHPVGATGMIMGKQLDQANMYGGTAQQPRPSMPFMPW 250
              G      + A  PY Y+ P   P+G  GM+MG            A  P P M    W
Sbjct: 183 ---GVGAEAATAAGYPYGYLPPGTAPIGNPGMVMGNP---------GAYPPNPYMGQPMW 213

Query: 251 PHAQPQQQ 258
               P+QQ
Sbjct: 243 QQPGPEQQ 213

[Close]
BLAST of Lsi03G008200 vs. TAIR10
Match: AT5G63470.1 (AT5G63470.1 nuclear factor Y, subunit C4)

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-53
Identity = 120/209 (57.42%), Postives = 144/209 (68.90%), Query Frame = 1 

Query: 35  SMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIE 94
           S+   G+   T+ P  P  S S     +       +HH   QQQQQQLQMFW  Q QEIE
Sbjct: 16  SVYPPGSAVTTVIPPPPSGSAS-----IVTGGGATYHHLL-QQQQQQLQMFWTYQRQEIE 75

Query: 95  QTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKR 154
           Q  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKR
Sbjct: 76  QVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKR 135

Query: 155 RTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE--GLGITKGSIPVVGSPADLPYYYVPS 214
           RTLQKNDIAAAI+RTD+FDFLVDI+PR+E+KEE        G   V  + + +PYYY P 
Sbjct: 136 RTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPM 195

Query: 215 QHPVGATGMIMGK-QLDQANMYGGTAQQP 241
             P    GM++G+  +D + +Y   AQ P
Sbjct: 196 GQPAVPGGMMIGRPAMDPSGVY---AQPP 215

[Close]
BLAST of Lsi03G008200 vs. NCBI nr
Match: gi|449438149|ref|XP_004136852.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus])

HSP 1 Score: 499.2 bits (1284), Expect = 4.4e-138
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTASMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQL YSNPYQTA MVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGGTAQQP 240
           RDELKEEGLGITK S+PVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYG TAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHAQPQQQQQTQQQSD 266
           RPSMPFMPWPH QPQQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]
BLAST of Lsi03G008200 vs. NCBI nr
Match: gi|255544598|ref|XP_002513360.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Ricinus communis])

HSP 1 Score: 416.0 bits (1068), Expect = 4.9e-113
Identity = 230/272 (84.56%), Postives = 240/272 (88.24%), Query Frame = 1 

Query: 1   MDQSERSQHQQQ-SQQPAGGV--GAGQLPYSN-PYQTASMVASGTPAITIP-PTQPPSSF 60
           MDQSE+ Q QQQ SQQP  GV  GAGQ+ YS  PYQT +M+ASG PAI +P PTQPPSSF
Sbjct: 1   MDQSEQGQQQQQQSQQPVMGVVAGAGQMAYSTAPYQTTAMMASGAPAIAVPSPTQPPSSF 60

Query: 61  SNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKA 120
           SNSPHQL YQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQT DFKNHSLPLARIKKIMKA
Sbjct: 61  SNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTMDFKNHSLPLARIKKIMKA 120

Query: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180
           DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL
Sbjct: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180

Query: 181 VDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGG 240
           VDIIPRDELKEEGLG+TK +IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA  YGG
Sbjct: 181 VDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAGYGG 240

Query: 241 TAQQPRPSMPFMPWPHAQPQQQQQ--TQQQSD 266
             QQPRP M FMPWP  QPQQQQQ   QQQSD
Sbjct: 241 -QQQPRPPMAFMPWPQTQPQQQQQQPQQQQSD 271

[Close]
BLAST of Lsi03G008200 vs. NCBI nr
Match: gi|590613292|ref|XP_007022622.1| (Nuclear transcription factor Y subunit C-2 isoform 1 [Theobroma cacao])

HSP 1 Score: 414.1 bits (1063), Expect = 1.9e-112
Identity = 228/278 (82.01%), Postives = 243/278 (87.41%), Query Frame = 1 

Query: 1   MDQSERSQ--------HQQQSQQPAGGV--GAGQLPYSN-PYQTASMVASGTPAITIP-P 60
           MDQSE++Q        HQQ  QQP  GV  GAGQ+ YS  PY TASMVASGTPA+ +P P
Sbjct: 1   MDQSEQTQQQHQHQQQHQQHQQQPVMGVVPGAGQMGYSTGPYHTASMVASGTPAVAVPSP 60

Query: 61  TQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR 120
           TQPP++FS+SPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR
Sbjct: 61  TQPPTTFSSSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR 120

Query: 121 IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR 180
           IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR
Sbjct: 121 IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR 180

Query: 181 TDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLD 240
           TDVFDFLVDIIPRDELKEEGLG+TK +IP+VGSPAD+PYYYVP QHPVG TGMIMGK +D
Sbjct: 181 TDVFDFLVDIIPRDELKEEGLGVTKATIPLVGSPADIPYYYVP-QHPVGPTGMIMGKPVD 240

Query: 241 QANMYGGTAQQPRPSMPFMPWPHAQPQQQQQTQQQSDA 267
           QA +Y G  QQ RP M FMPWP  QPQQQQ  QQQSD+
Sbjct: 241 QATLYPG--QQARPPMAFMPWPQGQPQQQQSQQQQSDS 275

[Close]
BLAST of Lsi03G008200 vs. NCBI nr
Match: gi|1009129970|ref|XP_015882049.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Ziziphus jujuba])

HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-111
Identity = 222/267 (83.15%), Postives = 236/267 (88.39%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQP--AGGVGAGQLPYSNP-YQTASMVASGTPAITIP-PTQPPSSFS 60
           MDQS ++Q Q Q  QP   G V   Q+ Y+ P YQTA MVASGTPA+ +P PTQPP++FS
Sbjct: 1   MDQSGQAQQQHQQPQPPVVGVVTGAQMTYAPPSYQTAPMVASGTPAVAVPSPTQPPTTFS 60

Query: 61  NSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 120
           NSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQT+DFKNHSLPLARIKKIMKAD
Sbjct: 61  NSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTSDFKNHSLPLARIKKIMKAD 120

Query: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180
           EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 181 DIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGGT 240
           DIIPRDELKEEGLG+TK +IPVVGSPAD+PYYYVP QHPVG TGMIMGK +DQA MY   
Sbjct: 181 DIIPRDELKEEGLGVTKATIPVVGSPADIPYYYVPPQHPVGPTGMIMGKPVDQAAMY--A 240

Query: 241 AQQPRPSMPFMPWPHAQPQQQQQTQQQ 264
           AQQPRP M F+PWP  QPQQQQQ QQQ
Sbjct: 241 AQQPRPPMAFVPWPQTQPQQQQQQQQQ 265

[Close]
BLAST of Lsi03G008200 vs. NCBI nr
Match: gi|802742645|ref|XP_012087361.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas])

HSP 1 Score: 406.4 bits (1043), Expect = 3.9e-110
Identity = 221/273 (80.95%), Postives = 239/273 (87.55%), Query Frame = 1 

Query: 1   MDQSERSQHQQQSQQ----PAGGV--GAGQLPYSN-PYQTASMVASGTPAITIPP-TQPP 60
           MDQSE++Q QQQ QQ    P  GV  GA Q+ Y+  PYQTA M+ASGTPA+ +P  TQ P
Sbjct: 1   MDQSEQTQQQQQQQQSQQLPVMGVVAGAAQMAYTTTPYQTAGMMASGTPAMAVPSSTQAP 60

Query: 61  SSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKI 120
           S++SNSPHQL YQQAQHFHHQQQQQQQQQLQMFWANQMQE+EQTTDFKNHSLPLARIKKI
Sbjct: 61  STYSNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEVEQTTDFKNHSLPLARIKKI 120

Query: 121 MKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180
           MKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF
Sbjct: 121 MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180

Query: 181 DFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANM 240
           DFLVDIIPRDELKEEGLG+TK +IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA +
Sbjct: 181 DFLVDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAV 240

Query: 241 YGGTAQQPRPSMPFMPWPHAQPQQQQQTQQQSD 266
           YG  AQQPRP + FMPWP  QPQQQQ  QQQSD
Sbjct: 241 YG--AQQPRPPVAFMPWPQNQPQQQQPQQQQSD 271

The following BLAST results are available for this feature:
BLAST of Lsi03G008200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NFYC2_ARATH6.3e-6870.09Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2... [more]
NFYC9_ARATH8.6e-5755.38Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2... [more]
NFYC1_ARATH1.4e-5462.30Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1... [more]
NFYC3_ARATH8.9e-5454.84Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2... [more]
NFYC4_ARATH8.3e-5257.42Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2... [more]
BLAST of Lsi03G008200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5U1_CUCSA3.1e-13897.74Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051420 PE=4 SV=1[more]
B9RHZ1_RICCO3.4e-11384.56Ccaat-binding transcription factor, putative OS=Ricinus communis GN=RCOM_1574650... [more]
A0A061FB94_THECC1.3e-11282.01Nuclear transcription factor Y subunit C-2 isoform 1 OS=Theobroma cacao GN=TCM_0... [more]
A0A067JQF0_JATCU2.7e-11080.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22608 PE=4 SV=1[more]
W9QHS7_9ROSA4.7e-11082.95Nuclear transcription factor Y subunit C-2 OS=Morus notabilis GN=L484_004059 PE=... [more]
BLAST of Lsi03G008200 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G56170.13.6e-6970.09 nuclear factor Y, subunit C2[more]
AT1G08970.44.8e-5855.38 nuclear factor Y, subunit C9[more]
AT3G48590.17.7e-5662.30 nuclear factor Y, subunit C1[more]
AT1G54830.25.0e-5554.84 nuclear factor Y, subunit C3[more]
AT5G63470.14.7e-5357.42 nuclear factor Y, subunit C4[more]
BLAST of Lsi03G008200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438149|ref|XP_004136852.1|4.4e-13897.74PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus][more]
gi|255544598|ref|XP_002513360.1|4.9e-11384.56PREDICTED: nuclear transcription factor Y subunit C-2 [Ricinus communis][more]
gi|590613292|ref|XP_007022622.1|1.9e-11282.01Nuclear transcription factor Y subunit C-2 isoform 1 [Theobroma cacao][more]
gi|1009129970|ref|XP_015882049.1|2.1e-11183.15PREDICTED: nuclear transcription factor Y subunit C-2 [Ziziphus jujuba][more]
gi|802742645|ref|XP_012087361.1|3.9e-11080.95PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G008200.1Lsi03G008200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 103..166
score: 2.3
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 95..167
score: 1.9
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 59..175
score: 1.05
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 35..261
score: 2.9E
NoneNo IPR availablePANTHERPTHR10252:SF49SUBFAMILY NOT NAMEDcoord: 35..261
score: 2.9E