MELO3C018689.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018689.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	nuclear transcription factor Y subunit C-2
Location	chr01 : 2153793 .. 2156247 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACACCTTCTCTCTCTTGATCCTTCTCTCTCTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCCCTTAGGGTTTCTGCTCTGCTTACTGATGAGCTTTGCTGCTCTCTTCTTTCTGCTTTGTTGATCAGAGGTGATCTTTTTCTCTTTTTTTTTTTTTTCTTTTCCTTTTCTTCTTATTTTTGTTGTTTAATAACTGTTTTTGGAACATGGGTATTGATTTTCATAAACTCTTTTCCCCTTTTGGTTTGATTCTGCTTTTATGGGGGTTTTGGTTTGCTCTTTGGTGCATGAGATGAAAGCGATGGAATTTTTGCATGAAGGAAGTTTGTTTCTTCTTTCTTTCTACTTAACTCTCTGCCTTGTTTTGATTTAGGAAGATCACGATTCCAGTACCATTTGGTTTGTCTTGGTTTTCTGCTTTTTCCCACCATCGGATGATTTTCAAATTGGAATCCATAGCTAAGCGATTGATTCAATCCAAGCTTTGGAAAATAATTCATGTGTCCAATTAAAGGTTCTGTTGGAGGGAGGGATTGGGTGTCCATAGATTTCATTTGTGGATAATTACTCTCTCTTTCACTTCTGATGAATTTCCTTAGTTCGAACTAGTTCTTTGATCAGTGTGTAGATTATATTTTCTGGCATGGAATCACTTCTCAATTCTTTTTAAATGCTTTATTGAAGGCTGTTTGAAAGCGAGGTCTTTGCTCTTTTTTCATTACTTAATTGATTGATGCTGCCTGCAGCTTTTTTTAATAGCTTTGTTAATAGTGTAATGTAAGTCTTTGGGAATAGAATCCTCCTTATTCTCTTAGATGATCAAGACTTTGGAGGTTCTTTAAGCATAATAAAAATGTTGAACTGCTTACTTTTGATGCGGCTTTTTGGTAATATTCTCTTTTCTTGTTCTGTGTTTCTTTTTTCTTTCGAAGGAACAGAAACTTACTTCTTTTTTTTTTTTCTTCTTCTCCAAGATTTTAATTTTTCATTTTGCAAGTAAAACAACAATAAGCATCTTATTCTTATTTCTGTTTCTGAGAAATGGAAAATTGAAAGAAAGAAAGCGAAGTCTTTTGTTGTTTGAATTTGTATACAAGTAGAAGAACCTGTGTTTGCTACTGATTCTGCTGAAACTTATGGGAATCTTGAATGGTAAAGTTCTTTGCAACTGAGTTAGACTCTTCATAATGTTGATAGAATTTTGTGTTGTAATCAGCAGTGTGGAAAAAATACACCAAGTATTGTGAGCAATGGATCAATCGGAGCGTTCTCAGCATCAGCAACAATCACAGCAACCTGCAGGTGGTGTGGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTGCTATTACAATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAGCAGCAGCAGCAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGACGTCCGAATGATTTCCGCTGAAGCACCGGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCATGGATTCACACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAAAGAGGAAGGTCTTGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCGGTGGGTGCTACAGGAATGATAATGGGGAAGCAATTAGATCAAGCGAACATGTATGGTGCCACTGCACAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCACAGCAGCAACAACAAACTCAGCAGCAAAGTGATGGATAGTTATAAGTAGTAGGTGGTTTCAAAACCGTCATGATATGATTTGATAGAGGCGATACTGAGTGACTTTGAATGTGTCTACTGTCTAGTTTAGTTCATAAAAGAATAGCTCTTGTAGAGAACTTGTCAATGATGACAAGTTGGAGTTGAGTTTGTATGATGAGAGGGTGTGTTTTATCTCTTATTACTCTTAATTATCTATTACTGTAATGTACAACAGTGTATGTGGAATAGGTTCCAACTTTGCCC

mRNA sequence

AAACACCTTCTCTCTCTTGATCCTTCTCTCTCTCTCTCNNNNNNNNNNNNNNNNNNNNCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCCCTTAGGGTTTCTGCTCTGCTTACTGATGAGCTTTGCTGCTCTCTTCTTTCTGCTTTGTTGATCAGAGCAGTGTGGAAAAAATACACCAAGTATTGTGAGCAATGGATCAATCGGAGCGTTCTCAGCATCAGCAACAATCACAGCAACCTGCAGGTGGTGTGGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTGCTATTACAATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAGCAGCAGCAGCAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGACGTCCGAATGATTTCCGCTGAAGCACCGGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCATGGATTCACACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAAAGAGGAAGGTCTTGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCGGTGGGTGCTACAGGAATGATAATGGGGAAGCAATTAGATCAAGCGAACATGTATGGTGCCACTGCACAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCACAGCAGCAACAACAAACTCAGCAGCAAAGTGATGGATAGTTATAAGTAGTAGGTGGTTTCAAAACCGTCATGATATGATTTGATAGAGGCGATACTGAGTGACTTTGAATGTGTCTACTGTCTAGTTTAGTTCATAAAAGAATAGCTCTTGTAGAGAACTTGTCAATGATGACAAGTTGGAGTTGAGTTTGTATGATGAGAGGGTGTGTTTTATCTCTTATTACTCTTAATTATCTATTACTGTAATGTACAACAGTGTATGTGGAATAGGTTCCAACTTTGCCC

Coding sequence (CDS)

ATGGATCAATCGGAGCGTTCTCAGCATCAGCAACAATCACAGCAACCTGCAGGTGGTGTGGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTGCTATTACAATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAGCAGCAGCAGCAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGACGTCCGAATGATTTCCGCTGAAGCACCGGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCATGGATTCACACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAAAGAGGAAGGTCTTGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCGGTGGGTGCTACAGGAATGATAATGGGGAAGCAATTAGATCAAGCGAACATGTATGGTGCCACTGCACAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCACAGCAGCAACAACAAACTCAGCAGCAAAGTGATGGATAG

Protein sequence

MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDG

Homology

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BLAST of MELO3C018689.2 vs. NCBI nr
Match: XP_004136852.1 (PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_008455267.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_011658757.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_016901763.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >KGN43662.1 hypothetical protein Csa_7G051420 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 9.0e-127
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHTQXXXXXXXXXXSDG 267
           RPSMPFMPWPHTQXXXXXXXXXXSDG
Sbjct: 241 RPSMPFMPWPHTQXXXXXXXXXXSDG 266

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BLAST of MELO3C018689.2 vs. NCBI nr
Match: XP_022927856.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_022927857.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata])

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 230/241 (95.44%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+Q   XXXXXXXXXXXXXXX FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQXXXXXXXXXXXXXXXVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 R 242
           R
Sbjct: 241 R 241

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BLAST of MELO3C018689.2 vs. NCBI nr
Match: XP_022988890.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 231/241 (95.85%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+Q   XXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 R 242
           R
Sbjct: 241 R 241

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BLAST of MELO3C018689.2 vs. NCBI nr
Match: XP_022157652.1 (nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157654.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157655.1 nuclear transcription factor Y subunit C-2 [Momordica charantia])

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 233/242 (96.28%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQP 240

Query: 241 RP 243
           RP
Sbjct: 241 RP 242

[Close]

BLAST of MELO3C018689.2 vs. NCBI nr
Match: XP_023529250.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo] >XP_023529251.1 nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 2.4e-111
Identity = 228/240 (95.00%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+Q   XXXXXXXXXXXXXXX FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQXXXXXXXXXXXXXXXVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMY ATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSATAQQP 240

[Close]

BLAST of MELO3C018689.2 vs. TAIR10
Match: AT1G56170.1 (nuclear factor Y, subunit C2)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-60
Identity = 151/216 (69.91%), Postives = 164/216 (75.93%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNS 60
           M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDYVPPHAYQSGPV--------------------NA 60

Query: 61  PHQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120
              +A+QXXXXXXXXXXXXXXXXXX FWANQMQEIE TTDFKNH+LPLARIKKIMKADED
Sbjct: 61  ASHMAFQXXXXXXXXXXXXXXXXXXMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADED 120

Query: 121 VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180
           VRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI
Sbjct: 121 VRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180

Query: 181 IPRDELKEEGLGITKASLP-VVGSPADLPYYYVPSQ 214
           IPRDELKEEGLG+TK ++P VVGSP   PYYY+  Q
Sbjct: 181 IPRDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of MELO3C018689.2 vs. TAIR10
Match: AT3G48590.1 (nuclear factor Y, subunit C1)

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-53
Identity = 101/156 (64.74%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 85  FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 144
           FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R
Sbjct: 47  FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 106

Query: 145 SWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPAD 204
           SW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + 
Sbjct: 107 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASG 166

Query: 205 LPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 241
           +PYYY P   P G  GM++G+     N  G   Q P
Sbjct: 167 VPYYYPPMGQPAGPGGMMIGRPAMDPN--GVYVQPP 199

[Close]

BLAST of MELO3C018689.2 vs. TAIR10
Match: AT1G54830.2 (nuclear factor Y, subunit C3)

HSP 1 Score: 198.4 bits (503), Expect = 5.7e-51
Identity = 132/215 (61.40%), Postives = 150/215 (69.77%), Query Frame = 0


Query: 11  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQXXXXX 70
           QQ Q  A   G      SNPYQ        T A+T  PT        S H   +Q    X
Sbjct: 3   QQGQSSAMNYG------SNPYQ--------TNAMTTTPT-------GSDHPAYHQ----X 62

Query: 71  XXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 130
           XXXXXXXXXXXX  FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  XXXXXXXXXXXXQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 131 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 190
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 191 ITKASLPVVGSPADLPYYYV-PSQHPVGATGMIMG 225
              A      + A  PY Y+ P   P+G  GM+MG
Sbjct: 183 GVGAE---AATAAGYPYGYLPPGTAPIGNPGMVMG 189

[Close]

BLAST of MELO3C018689.2 vs. TAIR10
Match: AT5G63470.1 (nuclear factor Y, subunit C4)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-45
Identity = 83/100 (83.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 85  FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 144
           FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R
Sbjct: 60  FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 119

Query: 145 SWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDEL 185
           SW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR+E+
Sbjct: 120 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEI 159

[Close]

BLAST of MELO3C018689.2 vs. TAIR10
Match: AT1G08970.4 (nuclear factor Y, subunit C9)

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 83/93 (89.25%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 85  FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 144
           FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLR
Sbjct: 62  FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLR 121

Query: 145 SWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD 178
           SW HTEENKRRTLQKNDIAAA++RTD+FDFLVD
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVD 154

[Close]

BLAST of MELO3C018689.2 vs. Swiss-Prot
Match: sp|Q8LCG7|NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-59
Identity = 151/216 (69.91%), Postives = 164/216 (75.93%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNS 60
           M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDYVPPHAYQSGPV--------------------NA 60

Query: 61  PHQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120
              +A+QXXXXXXXXXXXXXXXXXX FWANQMQEIE TTDFKNH+LPLARIKKIMKADED
Sbjct: 61  ASHMAFQXXXXXXXXXXXXXXXXXXMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADED 120

Query: 121 VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180
           VRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI
Sbjct: 121 VRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180

Query: 181 IPRDELKEEGLGITKASLP-VVGSPADLPYYYVPSQ 214
           IPRDELKEEGLG+TK ++P VVGSP   PYYY+  Q
Sbjct: 181 IPRDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of MELO3C018689.2 vs. Swiss-Prot
Match: sp|Q655V5|NFYC4_ORYSJ (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.8e-55
Identity = 146/220 (66.36%), Postives = 165/220 (75.00%), Query Frame = 0


Query: 15  QPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQXXX 74
           QPA GV AG  Q    Y+ A  V +  PA+    +QP  SF  +P      HQL YQXXX
Sbjct: 8   QPAIGVVAGGSQVYPAYRPAATVPT-APAVIPAGSQPAPSFPANPDQLSAQHQLVYQXXX 67

Query: 75  XXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 134
           XXXXXXXXXXXXXXXXFWA ++ +IEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 68  XXXXXXXXXXXXXXXXFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 127

Query: 135 IFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEG 194
           IFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG
Sbjct: 128 IFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEG 187

Query: 195 LGITKASLPVVGSPADLPY--YYVPSQHPVGATGMIMGKQ 227
           +G+ +A               YYVP Q   GA G+  G Q
Sbjct: 188 VGLPRAXXXXXXXXXXXXXYGYYVPQQQVPGA-GIAYGGQ 225

[Close]

BLAST of MELO3C018689.2 vs. Swiss-Prot
Match: sp|Q9SMP0|NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.4e-52
Identity = 101/156 (64.74%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 85  FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 144
           FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R
Sbjct: 47  FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 106

Query: 145 SWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPAD 204
           SW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + 
Sbjct: 107 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASG 166

Query: 205 LPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 241
           +PYYY P   P G  GM++G+     N  G   Q P
Sbjct: 167 VPYYYPPMGQPAGPGGMMIGRPAMDPN--GVYVQPP 199

[Close]

BLAST of MELO3C018689.2 vs. Swiss-Prot
Match: sp|Q9ZVL3|NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-49
Identity = 132/215 (61.40%), Postives = 150/215 (69.77%), Query Frame = 0


Query: 11  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQXXXXX 70
           QQ Q  A   G      SNPYQ        T A+T  PT        S H   +Q    X
Sbjct: 3   QQGQSSAMNYG------SNPYQ--------TNAMTTTPT-------GSDHPAYHQ----X 62

Query: 71  XXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 130
           XXXXXXXXXXXX  FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  XXXXXXXXXXXXQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 131 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 190
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 191 ITKASLPVVGSPADLPYYYV-PSQHPVGATGMIMG 225
              A      + A  PY Y+ P   P+G  GM+MG
Sbjct: 183 GVGAE---AATAAGYPYGYLPPGTAPIGNPGMVMG 189

[Close]

BLAST of MELO3C018689.2 vs. Swiss-Prot
Match: sp|Q9XE33|NFYC6_ORYSJ (Nuclear transcription factor Y subunit C-6 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC6 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-45
Identity = 96/134 (71.64%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 85  FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 144
           FWA Q +EIE TTDFKNH+LPLARIKKIMKADEDVRMI+AEAPV+FA+ACEMFILELT R
Sbjct: 72  FWAEQYREIEHTTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHR 131

Query: 145 SWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKE-EGLGITKASL--PVVGS 204
            W H EENKRRTLQK+DIAAAI+RT+VFDFLVDI+PRDE K+ E      A +  P  G 
Sbjct: 132 GWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRDEAKDAEAAAAVAAGIPHPAAGL 191

Query: 205 PADLP--YYYVPSQ 214
           PA  P  YYYV  Q
Sbjct: 192 PATDPMAYYYVQPQ 205

[Close]

BLAST of MELO3C018689.2 vs. TrEMBL
Match: tr|A0A1S3C190|A0A1S3C190_CUCME (nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC103495470 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 5.9e-127
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHTQXXXXXXXXXXSDG 267
           RPSMPFMPWPHTQXXXXXXXXXXSDG
Sbjct: 241 RPSMPFMPWPHTQXXXXXXXXXXSDG 266

[Close]

BLAST of MELO3C018689.2 vs. TrEMBL
Match: tr|A0A0A0K5U1|A0A0A0K5U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 5.9e-127
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHTQXXXXXXXXXXSDG 267
           RPSMPFMPWPHTQXXXXXXXXXXSDG
Sbjct: 241 RPSMPFMPWPHTQXXXXXXXXXXSDG 266

[Close]

BLAST of MELO3C018689.2 vs. TrEMBL
Match: tr|A0A2P5DMB0|A0A2P5DMB0_PARAD (Nuclear transcription factor Y subunit C OS=Parasponia andersonii OX=3476 GN=PanNFYC2 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 4.1e-96
Identity = 211/253 (83.40%), Postives = 223/253 (88.14%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGV--GAGQLQYSNP-YQTAPMVASGTPAITIP-PTQPPSSFS 60
           MDQSE    Q Q QQP  G+  G+GQ+ Y  P YQT+PMVASG PA+T+P PTQPP +FS
Sbjct: 1   MDQSE----QTQQQQPVMGIVAGSGQMSYGPPSYQTSPMVASGAPAVTVPSPTQPPGTFS 60

Query: 61  NSPHQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 120
           NS HQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQT DFKNHSLPLARIKKIMKAD
Sbjct: 61  NSSHQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTPDFKNHSLPLARIKKIMKAD 120

Query: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180
           EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 181 DIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAT 240
           DIIPRDELKEEGLG+TK +LPVVGSPAD+PYYYVP QHP G TGMIMGK +DQA MY   
Sbjct: 181 DIIPRDELKEEGLGVTKGTLPVVGSPADIPYYYVPPQHPAGPTGMIMGKPVDQAVMY--A 240

Query: 241 AQQPRPSMPFMPW 250
           AQQPRP M F+PW
Sbjct: 241 AQQPRPPMAFVPW 247

[Close]

BLAST of MELO3C018689.2 vs. TrEMBL
Match: tr|A0A2P5CB24|A0A2P5CB24_9ROSA (Nuclear transcription factor Y subunit C OS=Trema orientalis OX=63057 GN=TorNFYC2 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.6e-95
Identity = 211/253 (83.40%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGV--GAGQLQYSNP-YQTAPMVASGTPAITIP-PTQPPSSFS 60
           MDQSE    Q Q QQ   G+  G+GQ+ Y  P YQT+PMVASG PA+ +P PTQPP +FS
Sbjct: 1   MDQSE----QTQQQQTVVGIVAGSGQMSYGPPSYQTSPMVASGAPAVAVPSPTQPPGTFS 60

Query: 61  NSPHQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 120
           NS HQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD
Sbjct: 61  NSSHQLAYQXXXXXXXXXXXXXXXXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 120

Query: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180
           EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 181 DIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAT 240
           DIIPRDELKEEGLGITK +LPVVGSPAD+PYYYVP QHP G TGMIMGK +DQA MY   
Sbjct: 181 DIIPRDELKEEGLGITKGTLPVVGSPADIPYYYVPPQHPAGPTGMIMGKPVDQAAMY--A 240

Query: 241 AQQPRPSMPFMPW 250
           AQQPRP M F+PW
Sbjct: 241 AQQPRPPMAFVPW 247

[Close]

BLAST of MELO3C018689.2 vs. TrEMBL
Match: tr|A0A2I4GVK3|A0A2I4GVK3_9ROSI (nuclear transcription factor Y subunit C-2 OS=Juglans regia OX=51240 GN=LOC109011255 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 3.5e-95
Identity = 198/234 (84.62%), Postives = 210/234 (89.74%), Query Frame = 0


Query: 21  GAGQLQYSNPYQTAPMVASGTPAITI-PPTQPPSSFSNSPHQLAYQXXXXXXXXXXXXXX 80
           GA Q+ Y+ PYQTAPMVASGTP   +  PTQPP++F+N  HQLAYQ   XXXXXXXXXXX
Sbjct: 25  GANQMAYATPYQTAPMVASGTPTGAVHSPTQPPTTFANPSHQLAYQQAQXXXXXXXXXXX 84

Query: 81  XXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFIL 140
           XXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFIL
Sbjct: 85  XXXXXFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFIL 144

Query: 141 ELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVV 200
           ELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TKA++PVV
Sbjct: 145 ELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKATIPVV 204

Query: 201 GSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQ 254
           GSPAD+PYYYVPSQHPVG TGMIMGK +DQA MY    QQPR  M FMPWP +Q
Sbjct: 205 GSPADIPYYYVPSQHPVGPTGMIMGKPVDQAAMY--ATQQPRAPMAFMPWPQSQ 256

The following BLAST results are available for this feature:

BLAST of MELO3C018689.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136852.1	9.0e-127	100.00	PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_0084...	[more]
XP_022927856.1	1.3e-112	95.44	nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_0229278...	[more]
XP_022988890.1	1.3e-112	95.85	nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891...	[more]
XP_022157652.1	1.6e-112	96.28	nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1...	[more]
XP_023529250.1	2.4e-111	95.00	nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MELO3C018689.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56170.1	1.8e-60	69.91	nuclear factor Y, subunit C2	[more]
AT3G48590.1	4.7e-53	64.74	nuclear factor Y, subunit C1	[more]
AT1G54830.2	5.7e-51	61.40	nuclear factor Y, subunit C3	[more]
AT5G63470.1	8.0e-45	83.00	nuclear factor Y, subunit C4	[more]
AT1G08970.4	1.5e-43	89.25	nuclear factor Y, subunit C9	[more]

BLAST of MELO3C018689.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LCG7\|NFYC2_ARATH	3.2e-59	69.91	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q655V5\|NFYC4_ORYSJ	2.8e-55	66.36	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
sp\|Q9SMP0\|NFYC1_ARATH	8.4e-52	64.74	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q9ZVL3\|NFYC3_ARATH	1.0e-49	61.40	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q9XE33\|NFYC6_ORYSJ	1.2e-45	71.64	Nuclear transcription factor Y subunit C-6 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of MELO3C018689.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C190\|A0A1S3C190_CUCME	5.9e-127	100.00	nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC1034954...	[more]
tr\|A0A0A0K5U1\|A0A0A0K5U1_CUCSA	5.9e-127	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=4 SV=1	[more]
tr\|A0A2P5DMB0\|A0A2P5DMB0_PARAD	4.1e-96	83.40	Nuclear transcription factor Y subunit C OS=Parasponia andersonii OX=3476 GN=Pan...	[more]
tr\|A0A2P5CB24\|A0A2P5CB24_9ROSA	1.6e-95	83.40	Nuclear transcription factor Y subunit C OS=Trema orientalis OX=63057 GN=TorNFYC...	[more]
tr\|A0A2I4GVK3\|A0A2I4GVK3_9ROSI	3.5e-95	84.62	nuclear transcription factor Y subunit C-2 OS=Juglans regia OX=51240 GN=LOC10901...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold
IPR003958	CBFA_NFYB_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018689.2.1	MELO3C018689.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 103..166 e-value: 2.4E-21 score: 75.7
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 64..181 e-value: 5.9E-48 score: 163.9
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 59..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..266
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 18..259
None	No IPR available	PANTHER	PTHR10252:SF71	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-2	coord: 18..259

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C018689.2	Csa7G051420	Cucumber (Chinese Long) v2	cumedB509
MELO3C018689.2	CSPI07G05080	Wild cucumber (PI 183967)	cpimedB523
MELO3C018689.2	Cucsa.345940	Cucumber (Gy14) v1	cgymedB563
MELO3C018689.2	CmaCh11G016190	Cucurbita maxima (Rimu)	cmamedB106
MELO3C018689.2	CmaCh19G002860	Cucurbita maxima (Rimu)	cmamedB528
MELO3C018689.2	CmoCh19G003130	Cucurbita moschata (Rifu)	cmomedB515
MELO3C018689.2	CmoCh11G015110	Cucurbita moschata (Rifu)	cmomedB091
MELO3C018689.2	Lsi03G008200	Bottle gourd (USVL1VR-Ls)	lsimedB260
MELO3C018689.2	Cp4.1LG04g06850	Cucurbita pepo (Zucchini)	cpemedB715
MELO3C018689.2	Cp4.1LG15g02590	Cucurbita pepo (Zucchini)	cpemedB256
MELO3C018689.2	CsGy7G004640	Cucumber (Gy14) v2	cgybmedB465
MELO3C018689.2	Cla97C09G176240	Watermelon (97103) v2	medwmbB200
MELO3C018689.2	Carg24587	Silver-seed gourd	carmedB0654
MELO3C018689.2	Carg23996	Silver-seed gourd	carmedB0740
MELO3C018689.2	CsaV3_7G006030	Cucumber (Chinese Long) v3	cucmedB536

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C018689.2	Wax gourd	medwgoB220
MELO3C018689.2	Cucurbita maxima (Rimu)	cmamedB534
MELO3C018689.2	Cucurbita moschata (Rifu)	cmomedB521
MELO3C018689.2	Bottle gourd (USVL1VR-Ls)	lsimedB098
MELO3C018689.2	Watermelon (Charleston Gray)	medwcgB163