CmoCh19G003130 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G003130
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DNA binding transcription factor
Location	Cmo_Chr19 : 2356529 .. 2357275 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAATCAGAGCGTTCACAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTGGGCGGTGCGGGCGGTGCAGGCACATATTCTAATCCTTACCAAACAGCTCCGTTGGTGGCTTCCGGAACACCCGCCATTACAGTTCCCCCAACTCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCACCACCAGCAACAACAGCACCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCCCTTGCTCGAATCAAGAAGATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCACCCGTTGTATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTACGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATCGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACTAAAGCCTCTATTCCTGTAGTTGGTTCCCCAGCTGATATTCCTTATTACTATGTTCCCTCGCAGCATCCAGTTGGTGCGACGGGGATGATCATGGGGAAGCAATTGGATCAAGCGAATGTGTACGGTGCCACTGCTCAACAGCCACGACCACCTATGCCGTTCATGCCATGGCCGCACACTCAACCTCAGCAGCAGCAGCAGCAGCAATGA

mRNA sequence

ATGGATCAATCAGAGCGTTCACAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTGGGCGGTGCGGGCGGTGCAGGCACATATTCTAATCCTTACCAAACAGCTCCGTTGGTGGCTTCCGGAACACCCGCCATTACAGTTCCCCCAACTCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCACCACCAGCAACAACAGCACCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCCCTTGCTCGAATCAAGAAGATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCACCCGTTGTATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTACGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATCGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACTAAAGCCTCTATTCCTGTAGTTGGTTCCCCAGCTGATATTCCTTATTACTATGTTCCCTCGCAGCATCCAGTTGGTGCGACGGGGATGATCATGGGGAAGCAATTGGATCAAGCGAATGTGTACGGTGCCACTGCTCAACAGCCACGACCACCTATGCCGTTCATGCCATGGCCGCACACTCAACCTCAGCAGCAGCAGCAGCAGCAATGA

Coding sequence (CDS)

ATGGATCAATCAGAGCGTTCACAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTGGGCGGTGCGGGCGGTGCAGGCACATATTCTAATCCTTACCAAACAGCTCCGTTGGTGGCTTCCGGAACACCCGCCATTACAGTTCCCCCAACTCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCACCACCAGCAACAACAGCACCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCCCTTGCTCGAATCAAGAAGATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCACCCGTTGTATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTACGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATCGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACTAAAGCCTCTATTCCTGTAGTTGGTTCCCCAGCTGATATTCCTTATTACTATGTTCCCTCGCAGCATCCAGTTGGTGCGACGGGGATGATCATGGGGAAGCAATTGGATCAAGCGAATGTGTACGGTGCCACTGCTCAACAGCCACGACCACCTATGCCGTTCATGCCATGGCCGCACACTCAACCTCAGCAGCAGCAGCAGCAGCAATGA

Homology

[Close]

BLAST of CmoCh19G003130 vs. Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 5.0e-67
Identity = 147/207 (71.01%), Postives = 159/207 (76.81%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQA 60
           M+QSE  Q QQQ            G   Y  P  YQ+ P+ A+         + +AFQQA
Sbjct: 1   MEQSEEGQQQQQQ-----------GVMDYVPPHAYQSGPVNAA---------SHMAFQQA 60

Query: 61  QHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 120
            HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVRMISAEAP
Sbjct: 61  HHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAP 120

Query: 121 VVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 180
           V+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE
Sbjct: 121 VIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 180

Query: 181 GLGITKASIP-VVGSPADIPYYYVPSQ 201
           GLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 GLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of CmoCh19G003130 vs. Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-56
Identity = 140/235 (59.57%), Postives = 162/235 (68.94%), Query Frame = 1


Query: 22  GAGGAGTY-SNPYQTAPLVASGTPAITVP-----PTQLAFQQAQHFHHHQQ--QQHQMFW 81
           G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW
Sbjct: 7   GQSGAMNYGTNPYQTNPM---STTAATVAGGAAQPGQLAFHQIHQQQQQQQLAQQLQAFW 66

Query: 82  ANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSW 141
            NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA+ACEMFILELTLRSW
Sbjct: 67  ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSW 126

Query: 142 IHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADI 201
            HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  
Sbjct: 127 NHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAA-AGY 186

Query: 202 PYYYVPS-QHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ 247
           PY Y+P+   P+G  GM+MG      N  GA      PP P+M  P  Q Q   Q
Sbjct: 187 PYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYMGQPMWQQQAPDQ 226

[Close]

BLAST of CmoCh19G003130 vs. Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.3e-54
Identity = 114/191 (59.69%), Postives = 136/191 (71.20%), Query Frame = 1


Query: 34  QTAPLVASGTPAITVPPTQLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTDFKNHS 93
           Q  P  A+G P      T  A      +HH    QQQQ Q+FW  Q QEIEQ  DFKNH 
Sbjct: 6   QQPPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTYQRQEIEQVNDFKNHQ 65

Query: 94  LPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIA 153
           LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIA
Sbjct: 66  LPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIA 125

Query: 154 AAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIM 213
           AAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++
Sbjct: 126 AAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMMI 185

Query: 214 GK-QLDQANVY 221
           G+  +D   VY
Sbjct: 186 GRPAMDPNGVY 195

[Close]

BLAST of CmoCh19G003130 vs. Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.9e-52
Identity = 131/230 (56.96%), Postives = 149/230 (64.78%), Query Frame = 1


Query: 22  GAGGAGTY-SNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQH-----QMFWAN 81
           G   A  Y SNPYQT         A+T  PT  +   A H  H QQQQ      Q FW  
Sbjct: 5   GQSSAMNYGSNPYQTN--------AMTTTPTG-SDHPAYHQIHQQQQQQLTQQLQSFWET 64

Query: 82  QMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIH 141
           Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA+ACEMFILELTLRSW H
Sbjct: 65  QFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNH 124

Query: 142 TEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYY 201
           TEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY 
Sbjct: 125 TEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAE---AATAAGYPYG 184

Query: 202 YV-PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQ 245
           Y+ P   P+G  GM+MG            A  P P M    W    P+QQ
Sbjct: 185 YLPPGTAPIGNPGMVMG---------NPGAYPPNPYMGQPMWQQPGPEQQ 213

[Close]

BLAST of CmoCh19G003130 vs. Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-51
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = 1


Query: 32  PYQTAPLVASGTPAITVPPT---QLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTD 91
           P    P  ++ T  I  PP+    +       +HH    QQQQ QMFW  Q QEIEQ  D
Sbjct: 14  PTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQRQEIEQVND 73

Query: 92  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQ 151
           FKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQ
Sbjct: 74  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 133

Query: 152 KNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA--DIPYYYVPSQHPV 211
           KNDIAAAI+RTD+FDFLVDI+PR+E+KEE    +      + +PA   +PYYY P   P 
Sbjct: 134 KNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPMGQPA 193

Query: 212 GATGMIMGK-QLDQANVYGATAQQ 227
              GM++G+  +D + VY     Q
Sbjct: 194 VPGGMMIGRPAMDPSGVYAQPPSQ 217

[Close]

BLAST of CmoCh19G003130 vs. TrEMBL
Match: A0A0A0K5U1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 3.9e-119
Identity = 231/263 (87.83%), Postives = 238/263 (90.49%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQ-------- 60
           MDQSERSQHQQQSQQPAGGVG   G   YSNPYQTAP+VASGTPAIT+PPTQ        
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGA--GQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNS 60

Query: 61  ---LAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120
              LA+QQAQHFHH QQQQ Q    MFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
Sbjct: 61  PHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120

Query: 121 VRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180
           VRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI
Sbjct: 121 VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180

Query: 181 IPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQ 240
           IPRDELKEEGLGITKAS+PVVGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQ
Sbjct: 181 IPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ 240

Query: 241 QPRPPMPFMPWPHTQPQQQQQQQ 249
           QPRP MPFMPWPHTQPQQQQQ Q
Sbjct: 241 QPRPSMPFMPWPHTQPQQQQQTQ 261

[Close]

BLAST of CmoCh19G003130 vs. TrEMBL
Match: W9QHS7_9ROSA (Nuclear transcription factor Y subunit C-2 OS=Morus notabilis GN=L484_004059 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.4e-100
Identity = 204/264 (77.27%), Postives = 217/264 (82.20%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVP----------- 60
           MDQSE++Q QQQ QQP  G+     AG     YQTAP+VASG PA  VP           
Sbjct: 1   MDQSEQTQQQQQQQQPVVGMV----AGYAPQSYQTAPMVASGAPAAPVPSQTQAPATFSN 60

Query: 61  -PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKIMKADE 120
            P QLA+QQAQHFHH QQQQ Q    MFW NQMQEIEQT DFKNHSLPLARIKKIMKADE
Sbjct: 61  SPHQLAYQQAQHFHHQQQQQQQQQLQMFWVNQMQEIEQTADFKNHSLPLARIKKIMKADE 120

Query: 121 DVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD 180
           DVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD
Sbjct: 121 DVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD 180

Query: 181 IIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATA 240
           IIPRDELKEEGLG+TKA++PVVGSPAD+PYYYVP QHPVG TGMIMGK +DQA +Y   A
Sbjct: 181 IIPRDELKEEGLGVTKATLPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAAMY--AA 240

Query: 241 QQPRPPMPFMPWPHTQPQQQQQQQ 249
           QQPRPPM F+PWP TQPQQQQQQQ
Sbjct: 241 QQPRPPMAFVPWPQTQPQQQQQQQ 258

[Close]

BLAST of CmoCh19G003130 vs. TrEMBL
Match: B9RHZ1_RICCO (Ccaat-binding transcription factor, putative OS=Ricinus communis GN=RCOM_1574650 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.4e-99
Identity = 205/265 (77.36%), Postives = 215/265 (81.13%), Query Frame = 1


Query: 1   MDQSERSQHQQQ-SQQPAGGVGGAGGAGTYSN-PYQTAPLVASGTPAITVP--------- 60
           MDQSE+ Q QQQ SQQP  GV    G   YS  PYQT  ++ASG PAI VP         
Sbjct: 1   MDQSEQGQQQQQQSQQPVMGVVAGAGQMAYSTAPYQTTAMMASGAPAIAVPSPTQPPSSF 60

Query: 61  ---PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKIMKA 120
              P QL +QQAQHFHH QQQQ Q    MFWANQMQEIEQT DFKNHSLPLARIKKIMKA
Sbjct: 61  SNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTMDFKNHSLPLARIKKIMKA 120

Query: 121 DEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180
           DEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL
Sbjct: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180

Query: 181 VDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGA 240
           VDIIPRDELKEEGLG+TKA+IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA  YG 
Sbjct: 181 VDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAGYGG 240

Query: 241 TAQQPRPPMPFMPWPHTQPQQQQQQ 248
             QQPRPPM FMPWP TQPQQQQQQ
Sbjct: 241 -QQQPRPPMAFMPWPQTQPQQQQQQ 264

[Close]

BLAST of CmoCh19G003130 vs. TrEMBL
Match: A0A067JQF0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22608 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.5e-99
Identity = 202/269 (75.09%), Postives = 218/269 (81.04%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPA-----GGVGGAGGAGTYSNPYQTAPLVASGTPAITVP------ 60
           MDQSE++Q QQQ QQ       G V GA      + PYQTA ++ASGTPA+ VP      
Sbjct: 1   MDQSEQTQQQQQQQQSQQLPVMGVVAGAAQMAYTTTPYQTAGMMASGTPAMAVPSSTQAP 60

Query: 61  ------PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKI 120
                 P QL +QQAQHFHH QQQQ Q    MFWANQMQE+EQTTDFKNHSLPLARIKKI
Sbjct: 61  STYSNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEVEQTTDFKNHSLPLARIKKI 120

Query: 121 MKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180
           MKADEDVRMISAEAPV+FAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF
Sbjct: 121 MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180

Query: 181 DFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANV 240
           DFLVDIIPRDELKEEGLG+TKA+IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA V
Sbjct: 181 DFLVDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAV 240

Query: 241 YGATAQQPRPPMPFMPWPHTQPQQQQQQQ 249
           YG  AQQPRPP+ FMPWP  QPQQQQ QQ
Sbjct: 241 YG--AQQPRPPVAFMPWPQNQPQQQQPQQ 267

[Close]

BLAST of CmoCh19G003130 vs. TrEMBL
Match: A0A061FB94_THECC (Nuclear transcription factor Y subunit C-2 isoform 1 OS=Theobroma cacao GN=TCM_033437 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.7e-98
Identity = 207/273 (75.82%), Postives = 219/273 (80.22%), Query Frame = 1


Query: 1   MDQSERSQ--------HQQQSQQPAGGV-GGAGGAGTYSNPYQTAPLVASGTPAITVP-- 60
           MDQSE++Q        HQQ  QQP  GV  GAG  G  + PY TA +VASGTPA+ VP  
Sbjct: 1   MDQSEQTQQQHQHQQQHQQHQQQPVMGVVPGAGQMGYSTGPYHTASMVASGTPAVAVPSP 60

Query: 61  ----------PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLAR 120
                     P QLA+QQAQHFHH QQQQ Q    MFWANQMQEIEQTTDFKNHSLPLAR
Sbjct: 61  TQPPTTFSSSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR 120

Query: 121 IKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR 180
           IKKIMKADEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR
Sbjct: 121 IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR 180

Query: 181 TDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLD 240
           TDVFDFLVDIIPRDELKEEGLG+TKA+IP+VGSPADIPYYYVP QHPVG TGMIMGK +D
Sbjct: 181 TDVFDFLVDIIPRDELKEEGLGVTKATIPLVGSPADIPYYYVP-QHPVGPTGMIMGKPVD 240

Query: 241 QANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ 249
           QA +Y    QQ RPPM FMPWP  QPQQQQ QQ
Sbjct: 241 QATLY--PGQQARPPMAFMPWPQGQPQQQQSQQ 270

[Close]

BLAST of CmoCh19G003130 vs. TAIR10
Match: AT1G56170.1 (AT1G56170.1 nuclear factor Y, subunit C2)

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-68
Identity = 147/207 (71.01%), Postives = 159/207 (76.81%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQA 60
           M+QSE  Q QQQ            G   Y  P  YQ+ P+ A+         + +AFQQA
Sbjct: 1   MEQSEEGQQQQQQ-----------GVMDYVPPHAYQSGPVNAA---------SHMAFQQA 60

Query: 61  QHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 120
            HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVRMISAEAP
Sbjct: 61  HHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAP 120

Query: 121 VVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 180
           V+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE
Sbjct: 121 VIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 180

Query: 181 GLGITKASIP-VVGSPADIPYYYVPSQ 201
           GLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 GLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of CmoCh19G003130 vs. TAIR10
Match: AT1G08970.4 (AT1G08970.4 nuclear factor Y, subunit C9)

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-57
Identity = 140/235 (59.57%), Postives = 162/235 (68.94%), Query Frame = 1


Query: 22  GAGGAGTY-SNPYQTAPLVASGTPAITVP-----PTQLAFQQAQHFHHHQQ--QQHQMFW 81
           G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW
Sbjct: 7   GQSGAMNYGTNPYQTNPM---STTAATVAGGAAQPGQLAFHQIHQQQQQQQLAQQLQAFW 66

Query: 82  ANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSW 141
            NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA+ACEMFILELTLRSW
Sbjct: 67  ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSW 126

Query: 142 IHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADI 201
            HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  
Sbjct: 127 NHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAA-AGY 186

Query: 202 PYYYVPS-QHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ 247
           PY Y+P+   P+G  GM+MG      N  GA      PP P+M  P  Q Q   Q
Sbjct: 187 PYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYMGQPMWQQQAPDQ 226

[Close]

BLAST of CmoCh19G003130 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1)

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-55
Identity = 114/191 (59.69%), Postives = 136/191 (71.20%), Query Frame = 1


Query: 34  QTAPLVASGTPAITVPPTQLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTDFKNHS 93
           Q  P  A+G P      T  A      +HH    QQQQ Q+FW  Q QEIEQ  DFKNH 
Sbjct: 6   QQPPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTYQRQEIEQVNDFKNHQ 65

Query: 94  LPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIA 153
           LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIA
Sbjct: 66  LPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIA 125

Query: 154 AAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIM 213
           AAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++
Sbjct: 126 AAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMMI 185

Query: 214 GK-QLDQANVY 221
           G+  +D   VY
Sbjct: 186 GRPAMDPNGVY 195

[Close]

BLAST of CmoCh19G003130 vs. TAIR10
Match: AT1G54830.2 (AT1G54830.2 nuclear factor Y, subunit C3)

HSP 1 Score: 205.7 bits (522), Expect = 3.3e-53
Identity = 131/230 (56.96%), Postives = 149/230 (64.78%), Query Frame = 1


Query: 22  GAGGAGTY-SNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQH-----QMFWAN 81
           G   A  Y SNPYQT         A+T  PT  +   A H  H QQQQ      Q FW  
Sbjct: 5   GQSSAMNYGSNPYQTN--------AMTTTPTG-SDHPAYHQIHQQQQQQLTQQLQSFWET 64

Query: 82  QMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIH 141
           Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA+ACEMFILELTLRSW H
Sbjct: 65  QFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNH 124

Query: 142 TEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYY 201
           TEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY 
Sbjct: 125 TEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAE---AATAAGYPYG 184

Query: 202 YV-PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQ 245
           Y+ P   P+G  GM+MG            A  P P M    W    P+QQ
Sbjct: 185 YLPPGTAPIGNPGMVMG---------NPGAYPPNPYMGQPMWQQPGPEQQ 213

[Close]

BLAST of CmoCh19G003130 vs. TAIR10
Match: AT5G63470.1 (AT5G63470.1 nuclear factor Y, subunit C4)

HSP 1 Score: 204.5 bits (519), Expect = 7.4e-53
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = 1


Query: 32  PYQTAPLVASGTPAITVPPT---QLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTD 91
           P    P  ++ T  I  PP+    +       +HH    QQQQ QMFW  Q QEIEQ  D
Sbjct: 14  PTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQRQEIEQVND 73

Query: 92  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQ 151
           FKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQ
Sbjct: 74  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 133

Query: 152 KNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA--DIPYYYVPSQHPV 211
           KNDIAAAI+RTD+FDFLVDI+PR+E+KEE    +      + +PA   +PYYY P   P 
Sbjct: 134 KNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPMGQPA 193

Query: 212 GATGMIMGK-QLDQANVYGATAQQ 227
              GM++G+  +D + VY     Q
Sbjct: 194 VPGGMMIGRPAMDPSGVYAQPPSQ 217

[Close]

BLAST of CmoCh19G003130 vs. NCBI nr
Match: gi|449438149|ref|XP_004136852.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 5.6e-119
Identity = 231/263 (87.83%), Postives = 238/263 (90.49%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQ-------- 60
           MDQSERSQHQQQSQQPAGGVG   G   YSNPYQTAP+VASGTPAIT+PPTQ        
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGA--GQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNS 60

Query: 61  ---LAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120
              LA+QQAQHFHH QQQQ Q    MFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
Sbjct: 61  PHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120

Query: 121 VRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180
           VRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI
Sbjct: 121 VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180

Query: 181 IPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQ 240
           IPRDELKEEGLGITKAS+PVVGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQ
Sbjct: 181 IPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ 240

Query: 241 QPRPPMPFMPWPHTQPQQQQQQQ 249
           QPRP MPFMPWPHTQPQQQQQ Q
Sbjct: 241 QPRPSMPFMPWPHTQPQQQQQTQ 261

[Close]

BLAST of CmoCh19G003130 vs. NCBI nr
Match: gi|703072226|ref|XP_010089230.1| (Nuclear transcription factor Y subunit C-2 [Morus notabilis])

HSP 1 Score: 373.2 bits (957), Expect = 3.4e-100
Identity = 204/264 (77.27%), Postives = 217/264 (82.20%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVP----------- 60
           MDQSE++Q QQQ QQP  G+     AG     YQTAP+VASG PA  VP           
Sbjct: 1   MDQSEQTQQQQQQQQPVVGMV----AGYAPQSYQTAPMVASGAPAAPVPSQTQAPATFSN 60

Query: 61  -PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKIMKADE 120
            P QLA+QQAQHFHH QQQQ Q    MFW NQMQEIEQT DFKNHSLPLARIKKIMKADE
Sbjct: 61  SPHQLAYQQAQHFHHQQQQQQQQQLQMFWVNQMQEIEQTADFKNHSLPLARIKKIMKADE 120

Query: 121 DVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD 180
           DVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD
Sbjct: 121 DVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD 180

Query: 181 IIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATA 240
           IIPRDELKEEGLG+TKA++PVVGSPAD+PYYYVP QHPVG TGMIMGK +DQA +Y   A
Sbjct: 181 IIPRDELKEEGLGVTKATLPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAAMY--AA 240

Query: 241 QQPRPPMPFMPWPHTQPQQQQQQQ 249
           QQPRPPM F+PWP TQPQQQQQQQ
Sbjct: 241 QQPRPPMAFVPWPQTQPQQQQQQQ 258

[Close]

BLAST of CmoCh19G003130 vs. NCBI nr
Match: gi|1009129970|ref|XP_015882049.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Ziziphus jujuba])

HSP 1 Score: 373.2 bits (957), Expect = 3.4e-100
Identity = 206/265 (77.74%), Postives = 219/265 (82.64%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP-YQTAPLVASGTPAITVP---------- 60
           MDQS ++Q Q Q  QP       G   TY+ P YQTAP+VASGTPA+ VP          
Sbjct: 1   MDQSGQAQQQHQQPQPPVVGVVTGAQMTYAPPSYQTAPMVASGTPAVAVPSPTQPPTTFS 60

Query: 61  --PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 120
             P QLA+QQAQHFHH QQQQ Q    MFWANQMQEIEQT+DFKNHSLPLARIKKIMKAD
Sbjct: 61  NSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTSDFKNHSLPLARIKKIMKAD 120

Query: 121 EDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180
           EDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 181 DIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGAT 240
           DIIPRDELKEEGLG+TKA+IPVVGSPADIPYYYVP QHPVG TGMIMGK +DQA +Y   
Sbjct: 181 DIIPRDELKEEGLGVTKATIPVVGSPADIPYYYVPPQHPVGPTGMIMGKPVDQAAMY--A 240

Query: 241 AQQPRPPMPFMPWPHTQPQQQQQQQ 249
           AQQPRPPM F+PWP TQPQQQQQQQ
Sbjct: 241 AQQPRPPMAFVPWPQTQPQQQQQQQ 263

[Close]

BLAST of CmoCh19G003130 vs. NCBI nr
Match: gi|255544598|ref|XP_002513360.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Ricinus communis])

HSP 1 Score: 369.4 bits (947), Expect = 4.9e-99
Identity = 205/265 (77.36%), Postives = 215/265 (81.13%), Query Frame = 1


Query: 1   MDQSERSQHQQQ-SQQPAGGVGGAGGAGTYSN-PYQTAPLVASGTPAITVP--------- 60
           MDQSE+ Q QQQ SQQP  GV    G   YS  PYQT  ++ASG PAI VP         
Sbjct: 1   MDQSEQGQQQQQQSQQPVMGVVAGAGQMAYSTAPYQTTAMMASGAPAIAVPSPTQPPSSF 60

Query: 61  ---PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKIMKA 120
              P QL +QQAQHFHH QQQQ Q    MFWANQMQEIEQT DFKNHSLPLARIKKIMKA
Sbjct: 61  SNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTMDFKNHSLPLARIKKIMKA 120

Query: 121 DEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180
           DEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL
Sbjct: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180

Query: 181 VDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGA 240
           VDIIPRDELKEEGLG+TKA+IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA  YG 
Sbjct: 181 VDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAGYGG 240

Query: 241 TAQQPRPPMPFMPWPHTQPQQQQQQ 248
             QQPRPPM FMPWP TQPQQQQQQ
Sbjct: 241 -QQQPRPPMAFMPWPQTQPQQQQQQ 264

[Close]

BLAST of CmoCh19G003130 vs. NCBI nr
Match: gi|802742645|ref|XP_012087361.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas])

HSP 1 Score: 369.0 bits (946), Expect = 6.5e-99
Identity = 202/269 (75.09%), Postives = 218/269 (81.04%), Query Frame = 1


Query: 1   MDQSERSQHQQQSQQPA-----GGVGGAGGAGTYSNPYQTAPLVASGTPAITVP------ 60
           MDQSE++Q QQQ QQ       G V GA      + PYQTA ++ASGTPA+ VP      
Sbjct: 1   MDQSEQTQQQQQQQQSQQLPVMGVVAGAAQMAYTTTPYQTAGMMASGTPAMAVPSSTQAP 60

Query: 61  ------PTQLAFQQAQHFHHHQQQQHQ----MFWANQMQEIEQTTDFKNHSLPLARIKKI 120
                 P QL +QQAQHFHH QQQQ Q    MFWANQMQE+EQTTDFKNHSLPLARIKKI
Sbjct: 61  STYSNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEVEQTTDFKNHSLPLARIKKI 120

Query: 121 MKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180
           MKADEDVRMISAEAPV+FAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF
Sbjct: 121 MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF 180

Query: 181 DFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANV 240
           DFLVDIIPRDELKEEGLG+TKA+IP+VGSPAD+PYYYVP QHPVG  GMIMGK +DQA V
Sbjct: 181 DFLVDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAV 240

Query: 241 YGATAQQPRPPMPFMPWPHTQPQQQQQQQ 249
           YG  AQQPRPP+ FMPWP  QPQQQQ QQ
Sbjct: 241 YG--AQQPRPPVAFMPWPQNQPQQQQPQQ 267

The following BLAST results are available for this feature:

BLAST of CmoCh19G003130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFYC2_ARATH	5.0e-67	71.01	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2...	[more]
NFYC9_ARATH	2.3e-56	59.57	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2...	[more]
NFYC1_ARATH	8.3e-54	59.69	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1...	[more]
NFYC3_ARATH	5.9e-52	56.96	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2...	[more]
NFYC4_ARATH	1.3e-51	56.37	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2...	[more]

BLAST of CmoCh19G003130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5U1_CUCSA	3.9e-119	87.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051420 PE=4 SV=1	[more]
W9QHS7_9ROSA	2.4e-100	77.27	Nuclear transcription factor Y subunit C-2 OS=Morus notabilis GN=L484_004059 PE=...	[more]
B9RHZ1_RICCO	3.4e-99	77.36	Ccaat-binding transcription factor, putative OS=Ricinus communis GN=RCOM_1574650...	[more]
A0A067JQF0_JATCU	4.5e-99	75.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22608 PE=4 SV=1	[more]
A0A061FB94_THECC	1.7e-98	75.82	Nuclear transcription factor Y subunit C-2 isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]

BLAST of CmoCh19G003130 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56170.1	2.8e-68	71.01	nuclear factor Y, subunit C2	[more]
AT1G08970.4	1.3e-57	59.57	nuclear factor Y, subunit C9	[more]
AT3G48590.1	4.7e-55	59.69	nuclear factor Y, subunit C1	[more]
AT1G54830.2	3.3e-53	56.96	nuclear factor Y, subunit C3	[more]
AT5G63470.1	7.4e-53	56.37	nuclear factor Y, subunit C4	[more]

BLAST of CmoCh19G003130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438149\|ref\|XP_004136852.1\|	5.6e-119	87.83	PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus]	[more]
gi\|703072226\|ref\|XP_010089230.1\|	3.4e-100	77.27	Nuclear transcription factor Y subunit C-2 [Morus notabilis]	[more]
gi\|1009129970\|ref\|XP_015882049.1\|	3.4e-100	77.74	PREDICTED: nuclear transcription factor Y subunit C-2 [Ziziphus jujuba]	[more]
gi\|255544598\|ref\|XP_002513360.1\|	4.9e-99	77.36	PREDICTED: nuclear transcription factor Y subunit C-2 [Ricinus communis]	[more]
gi\|802742645\|ref\|XP_012087361.1\|	6.5e-99	75.09	PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003958	CBFA_NFYB_domain
IPR009072	Histone-fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003130.1	CmoCh19G003130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 90..153 score: 1.6
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 82..154 score: 1.1
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 60..162 score: 1.46
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 24..248 score: 4.5E
None	No IPR available	PANTHER	PTHR10252:SF48	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED	coord: 24..248 score: 4.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G003130	Cucsa.345940	Cucumber (Gy14) v1	cgycmoB0948
CmoCh19G003130	CmaCh11G016190	Cucurbita maxima (Rimu)	cmacmoB147
CmoCh19G003130	CmaCh19G002860	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G003130	Cla004399	Watermelon (97103) v1	cmowmB467
CmoCh19G003130	Csa7G051420	Cucumber (Chinese Long) v2	cmocuB523
CmoCh19G003130	MELO3C018689	Melon (DHL92) v3.5.1	cmomeB446
CmoCh19G003130	CSPI07G05080	Wild cucumber (PI 183967)	cmocpiB529
CmoCh19G003130	Lsi03G008200	Bottle gourd (USVL1VR-Ls)	cmolsiB466
CmoCh19G003130	Cp4.1LG15g02590	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G003130	Cp4.1LG04g06850	Cucurbita pepo (Zucchini)	cmocpeB493
CmoCh19G003130	MELO3C018689.2	Melon (DHL92) v3.6.1	cmomedB515
CmoCh19G003130	CsaV3_7G006030	Cucumber (Chinese Long) v3	cmocucB0627
CmoCh19G003130	Cla97C09G176240	Watermelon (97103) v2	cmowmbB532
CmoCh19G003130	Bhi05G000628	Wax gourd	cmowgoB0656
CmoCh19G003130	CsGy7G004640	Cucumber (Gy14) v2	cgybcmoB931
CmoCh19G003130	Carg23996	Silver-seed gourd	carcmoB1001
CmoCh19G003130	Carg24587	Silver-seed gourd	carcmoB0890

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G003130	CmoCh11G015110	Cucurbita moschata (Rifu)	cmocmoB109

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G003130	Cucumber (Gy14) v2	cgybcmoB764
CmoCh19G003130	Cucumber (Chinese Long) v3	cmocucB0619
CmoCh19G003130	Cucumber (Gy14) v1	cgycmoB0528
CmoCh19G003130	Wild cucumber (PI 183967)	cmocpiB522
CmoCh19G003130	Cucumber (Chinese Long) v2	cmocuB515
CmoCh19G003130	Watermelon (Charleston Gray)	cmowcgB442