Cp4.1LG04g06850 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g06850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Nuclear transcription factor Y subunit C-2-like protein
Location	Cp4.1LG04 : 4668502 .. 4671501 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACAACATTGGAACTGCAAATTGGAGAACTGCGAGCGTCCCCTTCCACCATTCTCCTTCTCTCCGCCACTCTCTCTCCGCCACTTGTCCTCCGCCATCGCTCTCACTCCTCGACACGTTTCGCCTTTATACTCTCTCTCTCTCTCTCTCCTTCAAGACCTCCGTTGAAGCCTTCTCTCTCTCTCTCTCTCTCTCCATTGTTTTCTCTGTTTTTTCTCTTAGGGTTTCTGCTCTGCTACTGATGAGCTTTGCCGGAGTACTTGTTTGAAAGTCAGAGGTCATCTTCTTCTTTTGTTCTTTAATTCGTGTTTTCGATGATGGCTATGGATTGTTTTCAACTGTTTTGGTTTTGATTTTCTGCGGTTTTCTTTCTTTCTCTCTGCTGCATGAGATGACAGTAATTGAAAATTGCATGAGGCTTTTCATTACATGTTTATTGTTCATATGTAACTCTTTAGCTTGGTTCTTATTTGAGAAGATGGTGTGGATTGTAAGATATTAACGTTTCTGGAAGCTATTTGGATTGTCTTGATTTTCTGCTTTTTACCACCATCTGACTGATTTGAAACTGATATCCAAATCCATGATTTGTTTGATCGAAACTCTGTAAATGAATTCCTGTATTCGATTGGGAGTTCTGTTGGAGATCCAGGAAGATCAAGAGTTCATAGGAATTGATTGAGTTTGAAGTTAGAACAGATTGGAGAACTTATGATTTCTATTATCTTGTTCTGTGATTAGATGCCACTTTTTTAAGGCTCCTTTTTCTCATAATAATTACTATCCATTTCACTCCTAATTATTATCCTTTTTTTTTTGTTGGCTTGAGCCAGTTCTTTAATGAGTGGATATGTGAGAGTCTAGGCTGTACTTGCTCTTTAATTGCTTTACTGAACTCTGTTTGAAGATTGGGTTCTTCTTCTTTTTCTTATTACTTAATAGATTGATGCTGCTTTTAGTGTAATCCAAGGCTTTGGGTGTAGAATCCCCCTTGTTCTCCAACTTGATCAAAGCTATGAAGGTTCTTAAAGGATGGGAAAAATGTTGAACTGGTTACTTTTGATTGGGCTTTTTACCAATATTCTCTTTTCTTCTTTTTTGTTTCTCTTTTTCTTCCCTCTTTTTTCTTGGGAAAGAAGAACTCAAATGGGTTTTGACTTGCTTTTCATTGAGTGGAAACAAAAATGTTCTGTGTTTTTTGTTTCTTGTTGTCTAAGATTTTTAGTTTAAAATAAATTTATTTGATAAACGGGAAAATAGGAAGAAAGAAAACGAACTCTTTTGTTAAGAACATGAATAATTTCCCCCTTGAGATGCTGATTGTTGATTTAGAACGCCTGGGCTTGTTCTTTGCAATTGGGTTAGTGTTCTTATTGTTGAAAGTATTTTCTGTTCTGATCAGCAGTGTGCAAAATATACTACTTATTGTGAGCCATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGGGGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGCAGCAGCAACAACAGCAACAACAGCTCCAAGTGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCACCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATATCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACAGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCGTGGCCGCATACTCAAGCTCAGCAGCAGCAGCAACAACAAACTCAGCAGCAAAGTGACGCATAGGTAAAAGTAGTAGAGATGCTTTCTGGACAGTCATGATATGATTGGTAGAGGCGATGATACCACCAAGTGAGGTTTTTATGTGTTTAAATGTCTGATTTAGTTCATAAAAAATAGGTGTAGTAGAGATCTTATCTTGTCAATGATGACAAGTTTCAGTTGAGTTTGTATGATGAGAGGGTGTTCATCACTTATTACTCTGATTATCTATTTACTATAATGTACAACAATGCATGTGGAAGAGGATTCAACTTTGCCAAAAAGAACTATAGTTTCAATTTTGTCGAGGCTGTGCATAAAGATGTCTATCGAACCGGACGGGGACTATGAACAATATTGTTGAGGCAGTAGAGATGTCCACCTGGTGGCAGGGACTAAGAAGTCTTTTCCGTCCCTATTCTTGCTTCTTATTTCAATCTTCATTCATATAAAATATAAATTTGTTTTTCGAGATAAATTGCGGGATGAGTTCTCCACATTTGAAAATAATTTTCATTTTTCAATATATTTTCTCACAAAAAAAATAAATAAATAAAATAAAATATAATTTTAGAACTTCAAGTGGGTTTCTCCGCCATTGTTCGATTCTAGGTGGGTTTCTACGGGGCTGGGCTCCGACTCCCATTTAGATAAGGAGGAAAAATCTTTTCCACTCTCTTGTCTATTTTTCATTTAAATAAAAATTCTTTATTCTTAACCTAAATGATCATATCTAGATGTGTTTTTTATTTTCATTTAATTTTAGGTAACAGAACAGAAATA

mRNA sequence

GCACAACATTGGAACTGCAAATTGGAGAACTGCGAGCGTCCCCTTCCACCATTCTCCTTCTCTCCGCCACTCTCTCTCCGCCACTTGTCCTCCGCCATCGCTCTCACTCCTCGACACGGTTTCTGCTCTGCTACTGATGAGCTTTGCCGGAGTACTTGTTTGAAAGTCAGAGCCATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGGGGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGCAGCAGCAACAACAGCAACAACAGCTCCAAGTGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCACCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATATCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACAGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCGTGGCCGCATACTCAAGCTCAGCAGCAGCAGCAACAACAAACTCAGCAGCAAAGTAACAGAACAGAAATA

Coding sequence (CDS)

GCACAACATTGGAACTGCAAATTGGAGAACTGCGAGCGTCCCCTTCCACCATTCTCCTTCTCTCCGCCACTCTCTCTCCGCCACTTGTCCTCCGCCATCGCTCTCACTCCTCGACACGGTTTCTGCTCTGCTACTGATGAGCTTTGCCGGAGTACTTGTTTGAAAGTCAGAGCCATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGGGGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGCAGCAGCAACAACAGCAACAACAGCTCCAAGTGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCACCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATATCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACAGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCGTGGCCGCATACTCAAGCTCAGCAGCAGCAGCAACAACAAACTCAGCAGCAAAGTAACAGAACAGAAATA

Protein sequence

AQHWNCKLENCERPLPPFSFSPPLSLRHLSSAIALTPRHGFCSATDELCRSTCLKVRAMDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSATAQQPRPPIPFMPWPHTQAQQQQQQQTQQQSNRTEI

Homology

[Close]

BLAST of Cp4.1LG04g06850 vs. Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2 SV=2)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-66
Identity = 148/214 (69.16%), Postives = 159/214 (74.30%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 118
           M+QSE  Q QQQ          G + Y                  +PP    S   N+  
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDY------------------VPPHAYQSGPVNAAS 60

Query: 119 QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 178
            +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 179 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 238
           MISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 239 RDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 272
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Cp4.1LG04g06850 vs. Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.5e-55
Identity = 145/259 (55.98%), Postives = 175/259 (67.57%), Query Frame = 1


Query: 69  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 128
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPMS---TTAATV------AGGAAQPGQLAFHQ---I 62

Query: 129 HQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVI 188
           HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+
Sbjct: 63  HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVV 122

Query: 189 FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL 248
           FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E L
Sbjct: 123 FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVL 182

Query: 249 G-ITKASIPVVGSPADLPYYYVPS-QHPVSATGMIMGKQLDQANMYSATAQQPRPPIPFM 308
           G I + ++P   + A  PY Y+P+   P+   GM+MG   +    Y        PP P+M
Sbjct: 183 GSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG---NPGGAY--------PPNPYM 231

Query: 309 PWPHTQAQQQQQQQTQQQS 325
             P    QQQ   Q  Q++
Sbjct: 243 GQP--MWQQQAPDQPDQEN 231

[Close]

BLAST of Cp4.1LG04g06850 vs. Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.2e-53
Identity = 104/150 (69.33%), Postives = 123/150 (82.00%), Query Frame = 1


Query: 134 QQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACE 193
           QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE
Sbjct: 38  QQQQQQLQLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACE 97

Query: 194 MFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS 253
           +FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    
Sbjct: 98  LFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGG 157

Query: 254 IPVVGSPADLPYYYVPSQHPVSATGMIMGK 284
           + V  + + +PYYY P   P    GM++G+
Sbjct: 158 MVVAPTASGVPYYYPPMGQPAGPGGMMIGR 186

[Close]

BLAST of Cp4.1LG04g06850 vs. Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.6e-52
Identity = 137/251 (54.58%), Postives = 159/251 (63.35%), Query Frame = 1


Query: 69  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 128
           QQ Q +A   G      SNPYQT         A+T  PT    S   + HQ+        
Sbjct: 3   QQGQSSAMNYG------SNPYQTN--------AMTTTPT---GSDHPAYHQI-------- 62

Query: 129 HQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 188
           HQQQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 189 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 248
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 249 ITKASIPVVGSPADLPYYYV-PSQHPVSATGMIMGKQLDQANMYSATAQQPRPPIPFMPW 308
              A      + A  PY Y+ P   P+   GM+MG                 PP P+M  
Sbjct: 183 GVGAE---AATAAGYPYGYLPPGTAPIGNPGMVMGN------------PGAYPPNPYMGQ 213

Query: 309 PHTQAQQQQQQ 319
           P  Q    +QQ
Sbjct: 243 PMWQQPGPEQQ 213

[Close]

BLAST of Cp4.1LG04g06850 vs. Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.7e-51
Identity = 118/213 (55.40%), Postives = 145/213 (68.08%), Query Frame = 1


Query: 88  PYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQ 147
           P    P G++ T  I  PP+   S  +          A + H  QQQQQQ  LQ+FW  Q
Sbjct: 14  PTSVYPPGSAVTTVIPPPPSGSASIVTGGG-------ATYHHLLQQQQQQ--LQMFWTYQ 73

Query: 148 MQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHT 207
            QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H 
Sbjct: 74  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 133

Query: 208 EENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA--DLPY 267
           EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR+E+KEE    +      + +PA   +PY
Sbjct: 134 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPY 193

Query: 268 YYVPSQHPVSATGMIMGK-QLDQANMYSATAQQ 298
           YY P   P    GM++G+  +D + +Y+    Q
Sbjct: 194 YYPPMGQPAVPGGMMIGRPAMDPSGVYAQPPSQ 217

[Close]

BLAST of Cp4.1LG04g06850 vs. TrEMBL
Match: A0A0A0K5U1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.3e-130
Identity = 251/267 (94.01%), Postives = 256/267 (95.88%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 118
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 119 QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 178
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 179 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 238
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 239 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSATAQQP 298
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMY ATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 299 RPPIPFMPWPHTQAQQQQQQQTQQQSN 326
           RP +PFMPWPHT  Q QQQQQTQQQS+
Sbjct: 241 RPSMPFMPWPHT--QPQQQQQTQQQSD 265

[Close]

BLAST of Cp4.1LG04g06850 vs. TrEMBL
Match: W9QHS7_9ROSA (Nuclear transcription factor Y subunit C-2 OS=Morus notabilis GN=L484_004059 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.9e-109
Identity = 218/268 (81.34%), Postives = 236/268 (88.06%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPP-TQQPSSFSNSP 118
           MDQSE++Q QQQ QQ   G+ AG  P S  YQTAPM ASG PA  +P  TQ P++FSNSP
Sbjct: 1   MDQSEQTQQQQQQQQPVVGMVAGYAPQS--YQTAPMVASGAPAAPVPSQTQAPATFSNSP 60

Query: 119 HQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDV 178
           HQLA+QQAQHFH QQQQQQQQQLQ+FW NQMQEIEQT DFKNHSLPLARIKKIMKADEDV
Sbjct: 61  HQLAYQQAQHFHHQQQQQQQQQLQMFWVNQMQEIEQTADFKNHSLPLARIKKIMKADEDV 120

Query: 179 RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 238
           RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII
Sbjct: 121 RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 180

Query: 239 PRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSATAQQ 298
           PRDELKEEGLG+TKA++PVVGSPAD+PYYYVP QHPV  TGMIMGK +DQA MY+  AQQ
Sbjct: 181 PRDELKEEGLGVTKATLPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAAMYA--AQQ 240

Query: 299 PRPPIPFMPWPHTQAQQQQQQQTQQQSN 326
           PRPP+ F+PWP TQ QQQQQQQ QQQ++
Sbjct: 241 PRPPMAFVPWPQTQPQQQQQQQPQQQTD 264

[Close]

BLAST of Cp4.1LG04g06850 vs. TrEMBL
Match: B9RHZ1_RICCO (Ccaat-binding transcription factor, putative OS=Ricinus communis GN=RCOM_1574650 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.4e-108
Identity = 223/272 (81.99%), Postives = 235/272 (86.40%), Query Frame = 1


Query: 59  MDQSERSQHQQQ-SQQAAGGV--GAGQLPYSN-PYQTAPMGASGTPAITIP-PTQQPSSF 118
           MDQSE+ Q QQQ SQQ   GV  GAGQ+ YS  PYQT  M ASG PAI +P PTQ PSSF
Sbjct: 1   MDQSEQGQQQQQQSQQPVMGVVAGAGQMAYSTAPYQTTAMMASGAPAIAVPSPTQPPSSF 60

Query: 119 SNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKA 178
           SNSPHQL +QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQT DFKNHSLPLARIKKIMKA
Sbjct: 61  SNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTMDFKNHSLPLARIKKIMKA 120

Query: 179 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 238
           DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL
Sbjct: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180

Query: 239 VDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSA 298
           VDIIPRDELKEEGLG+TKA+IP+VGSPAD+PYYYVP QHPV   GMIMGK +DQA  Y  
Sbjct: 181 VDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAGYGG 240

Query: 299 TAQQPRPPIPFMPWPHTQAQQQQQQQTQQQSN 326
             QQPRPP+ FMPWP TQ QQQQQQ  QQQS+
Sbjct: 241 -QQQPRPPMAFMPWPQTQPQQQQQQPQQQQSD 271

[Close]

BLAST of Cp4.1LG04g06850 vs. TrEMBL
Match: A0A067F2I1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024265mg PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.0e-107
Identity = 215/271 (79.34%), Postives = 237/271 (87.45%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQA-AGGV--GAGQLPYSNPYQTAPMGASGTPAITIP-PTQQPSSFS 118
           MDQS+++Q QQQ QQ    GV  GAGQ+ Y  PY TAP+ ASGTPA+ +P PTQ PS+F+
Sbjct: 1   MDQSDQTQQQQQQQQQPVMGVVAGAGQMSYP-PYHTAPLVASGTPAVAVPSPTQPPSTFA 60

Query: 119 NSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 178
           +SPHQLA+QQAQHFH QQQQQQQQQLQ+FW+NQMQEIEQT DFKNHSLPLARIKKIMKAD
Sbjct: 61  SSPHQLAYQQAQHFHHQQQQQQQQQLQMFWSNQMQEIEQTADFKNHSLPLARIKKIMKAD 120

Query: 179 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 238
           EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 239 DIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSAT 298
           DIIPRDELKEEGLG+TK ++PVVGSP D+P YYVP QHPV  TGMIMGK +DQA +YS  
Sbjct: 181 DIIPRDELKEEGLGVTKGALPVVGSPGDMPLYYVPPQHPVGHTGMIMGKPVDQAALYS-- 240

Query: 299 AQQPRPPIPFMPWPHTQAQQQQQQQTQQQSN 326
            QQPRPP+ FMPWP +Q+Q QQQQQ QQQ N
Sbjct: 241 GQQPRPPVAFMPWPQSQSQAQQQQQPQQQQN 268

[Close]

BLAST of Cp4.1LG04g06850 vs. TrEMBL
Match: V4SET8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007003mg PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.0e-107
Identity = 215/271 (79.34%), Postives = 237/271 (87.45%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQA-AGGV--GAGQLPYSNPYQTAPMGASGTPAITIP-PTQQPSSFS 118
           MDQS+++Q QQQ QQ    GV  GAGQ+ Y  PY TAP+ ASGTPA+ +P PTQ PS+F+
Sbjct: 1   MDQSDQTQQQQQQQQQPVMGVVAGAGQMSYP-PYHTAPLVASGTPAVAVPSPTQPPSTFA 60

Query: 119 NSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 178
           +SPHQLA+QQAQHFH QQQQQQQQQLQ+FW+NQMQEIEQT DFKNHSLPLARIKKIMKAD
Sbjct: 61  SSPHQLAYQQAQHFHHQQQQQQQQQLQMFWSNQMQEIEQTADFKNHSLPLARIKKIMKAD 120

Query: 179 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 238
           EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 239 DIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSAT 298
           DIIPRDELKEEGLG+TK ++PVVGSP D+P YYVP QHPV  TGMIMGK +DQA +YS  
Sbjct: 181 DIIPRDELKEEGLGVTKGALPVVGSPGDMPLYYVPPQHPVGHTGMIMGKPVDQAALYS-- 240

Query: 299 AQQPRPPIPFMPWPHTQAQQQQQQQTQQQSN 326
            QQPRPP+ FMPWP +Q+Q QQQQQ QQQ N
Sbjct: 241 GQQPRPPVAFMPWPQSQSQAQQQQQPQQQQN 268

[Close]

BLAST of Cp4.1LG04g06850 vs. TAIR10
Match: AT1G56170.1 (AT1G56170.1 nuclear factor Y, subunit C2)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-68
Identity = 148/214 (69.16%), Postives = 159/214 (74.30%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 118
           M+QSE  Q QQQ          G + Y                  +PP    S   N+  
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDY------------------VPPHAYQSGPVNAAS 60

Query: 119 QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 178
            +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 179 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 238
           MISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 239 RDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 272
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Cp4.1LG04g06850 vs. TAIR10
Match: AT1G08970.4 (AT1G08970.4 nuclear factor Y, subunit C9)

HSP 1 Score: 218.0 bits (554), Expect = 8.6e-57
Identity = 145/259 (55.98%), Postives = 175/259 (67.57%), Query Frame = 1


Query: 69  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 128
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPMS---TTAATV------AGGAAQPGQLAFHQ---I 62

Query: 129 HQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVI 188
           HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+
Sbjct: 63  HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVV 122

Query: 189 FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL 248
           FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E L
Sbjct: 123 FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVL 182

Query: 249 G-ITKASIPVVGSPADLPYYYVPS-QHPVSATGMIMGKQLDQANMYSATAQQPRPPIPFM 308
           G I + ++P   + A  PY Y+P+   P+   GM+MG   +    Y        PP P+M
Sbjct: 183 GSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG---NPGGAY--------PPNPYM 231

Query: 309 PWPHTQAQQQQQQQTQQQS 325
             P    QQQ   Q  Q++
Sbjct: 243 GQP--MWQQQAPDQPDQEN 231

[Close]

BLAST of Cp4.1LG04g06850 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-54
Identity = 104/150 (69.33%), Postives = 123/150 (82.00%), Query Frame = 1


Query: 134 QQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACE 193
           QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE
Sbjct: 38  QQQQQQLQLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACE 97

Query: 194 MFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS 253
           +FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    
Sbjct: 98  LFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGG 157

Query: 254 IPVVGSPADLPYYYVPSQHPVSATGMIMGK 284
           + V  + + +PYYY P   P    GM++G+
Sbjct: 158 MVVAPTASGVPYYYPPMGQPAGPGGMMIGR 186

[Close]

BLAST of Cp4.1LG04g06850 vs. TAIR10
Match: AT1G54830.2 (AT1G54830.2 nuclear factor Y, subunit C3)

HSP 1 Score: 206.5 bits (524), Expect = 2.6e-53
Identity = 137/251 (54.58%), Postives = 159/251 (63.35%), Query Frame = 1


Query: 69  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 128
           QQ Q +A   G      SNPYQT         A+T  PT    S   + HQ+        
Sbjct: 3   QQGQSSAMNYG------SNPYQTN--------AMTTTPT---GSDHPAYHQI-------- 62

Query: 129 HQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 188
           HQQQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 189 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 248
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 249 ITKASIPVVGSPADLPYYYV-PSQHPVSATGMIMGKQLDQANMYSATAQQPRPPIPFMPW 308
              A      + A  PY Y+ P   P+   GM+MG                 PP P+M  
Sbjct: 183 GVGAE---AATAAGYPYGYLPPGTAPIGNPGMVMGN------------PGAYPPNPYMGQ 213

Query: 309 PHTQAQQQQQQ 319
           P  Q    +QQ
Sbjct: 243 PMWQQPGPEQQ 213

[Close]

BLAST of Cp4.1LG04g06850 vs. TAIR10
Match: AT5G63470.1 (AT5G63470.1 nuclear factor Y, subunit C4)

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-52
Identity = 118/213 (55.40%), Postives = 145/213 (68.08%), Query Frame = 1


Query: 88  PYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQ 147
           P    P G++ T  I  PP+   S  +          A + H  QQQQQQ  LQ+FW  Q
Sbjct: 14  PTSVYPPGSAVTTVIPPPPSGSASIVTGGG-------ATYHHLLQQQQQQ--LQMFWTYQ 73

Query: 148 MQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHT 207
            QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H 
Sbjct: 74  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 133

Query: 208 EENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA--DLPY 267
           EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR+E+KEE    +      + +PA   +PY
Sbjct: 134 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPY 193

Query: 268 YYVPSQHPVSATGMIMGK-QLDQANMYSATAQQ 298
           YY P   P    GM++G+  +D + +Y+    Q
Sbjct: 194 YYPPMGQPAVPGGMMIGRPAMDPSGVYAQPPSQ 217

[Close]

BLAST of Cp4.1LG04g06850 vs. NCBI nr
Match: gi|449438149|ref|XP_004136852.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus])

HSP 1 Score: 474.2 bits (1219), Expect = 1.9e-130
Identity = 251/267 (94.01%), Postives = 256/267 (95.88%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 118
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 119 QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 178
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 179 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 238
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 239 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSATAQQP 298
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMY ATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 299 RPPIPFMPWPHTQAQQQQQQQTQQQSN 326
           RP +PFMPWPHT  Q QQQQQTQQQS+
Sbjct: 241 RPSMPFMPWPHT--QPQQQQQTQQQSD 265

[Close]

BLAST of Cp4.1LG04g06850 vs. NCBI nr
Match: gi|1009129970|ref|XP_015882049.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Ziziphus jujuba])

HSP 1 Score: 405.6 bits (1041), Expect = 8.3e-110
Identity = 221/274 (80.66%), Postives = 240/274 (87.59%), Query Frame = 1


Query: 59  MDQSERSQ--HQQQSQQAAGGVGAGQLPYSNP-YQTAPMGASGTPAITIP-PTQQPSSFS 118
           MDQS ++Q  HQQ      G V   Q+ Y+ P YQTAPM ASGTPA+ +P PTQ P++FS
Sbjct: 1   MDQSGQAQQQHQQPQPPVVGVVTGAQMTYAPPSYQTAPMVASGTPAVAVPSPTQPPTTFS 60

Query: 119 NSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 178
           NSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQT+DFKNHSLPLARIKKIMKAD
Sbjct: 61  NSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTSDFKNHSLPLARIKKIMKAD 120

Query: 179 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 238
           EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 239 DIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSAT 298
           DIIPRDELKEEGLG+TKA+IPVVGSPAD+PYYYVP QHPV  TGMIMGK +DQA MY+  
Sbjct: 181 DIIPRDELKEEGLGVTKATIPVVGSPADIPYYYVPPQHPVGPTGMIMGKPVDQAAMYA-- 240

Query: 299 AQQPRPPIPFMPWPHTQAQQQQQQQTQQQSNRTE 329
           AQQPRPP+ F+PWP TQ QQQQQQQ QQQ  +TE
Sbjct: 241 AQQPRPPMAFVPWPQTQPQQQQQQQQQQQQQQTE 272

[Close]

BLAST of Cp4.1LG04g06850 vs. NCBI nr
Match: gi|703072226|ref|XP_010089230.1| (Nuclear transcription factor Y subunit C-2 [Morus notabilis])

HSP 1 Score: 402.5 bits (1033), Expect = 7.0e-109
Identity = 218/268 (81.34%), Postives = 236/268 (88.06%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPP-TQQPSSFSNSP 118
           MDQSE++Q QQQ QQ   G+ AG  P S  YQTAPM ASG PA  +P  TQ P++FSNSP
Sbjct: 1   MDQSEQTQQQQQQQQPVVGMVAGYAPQS--YQTAPMVASGAPAAPVPSQTQAPATFSNSP 60

Query: 119 HQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDV 178
           HQLA+QQAQHFH QQQQQQQQQLQ+FW NQMQEIEQT DFKNHSLPLARIKKIMKADEDV
Sbjct: 61  HQLAYQQAQHFHHQQQQQQQQQLQMFWVNQMQEIEQTADFKNHSLPLARIKKIMKADEDV 120

Query: 179 RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 238
           RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII
Sbjct: 121 RMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 180

Query: 239 PRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSATAQQ 298
           PRDELKEEGLG+TKA++PVVGSPAD+PYYYVP QHPV  TGMIMGK +DQA MY+  AQQ
Sbjct: 181 PRDELKEEGLGVTKATLPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAAMYA--AQQ 240

Query: 299 PRPPIPFMPWPHTQAQQQQQQQTQQQSN 326
           PRPP+ F+PWP TQ QQQQQQQ QQQ++
Sbjct: 241 PRPPMAFVPWPQTQPQQQQQQQPQQQTD 264

[Close]

BLAST of Cp4.1LG04g06850 vs. NCBI nr
Match: gi|255544598|ref|XP_002513360.1| (PREDICTED: nuclear transcription factor Y subunit C-2 [Ricinus communis])

HSP 1 Score: 400.2 bits (1027), Expect = 3.5e-108
Identity = 223/272 (81.99%), Postives = 235/272 (86.40%), Query Frame = 1


Query: 59  MDQSERSQHQQQ-SQQAAGGV--GAGQLPYSN-PYQTAPMGASGTPAITIP-PTQQPSSF 118
           MDQSE+ Q QQQ SQQ   GV  GAGQ+ YS  PYQT  M ASG PAI +P PTQ PSSF
Sbjct: 1   MDQSEQGQQQQQQSQQPVMGVVAGAGQMAYSTAPYQTTAMMASGAPAIAVPSPTQPPSSF 60

Query: 119 SNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKA 178
           SNSPHQL +QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQT DFKNHSLPLARIKKIMKA
Sbjct: 61  SNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTMDFKNHSLPLARIKKIMKA 120

Query: 179 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 238
           DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL
Sbjct: 121 DEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180

Query: 239 VDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSA 298
           VDIIPRDELKEEGLG+TKA+IP+VGSPAD+PYYYVP QHPV   GMIMGK +DQA  Y  
Sbjct: 181 VDIIPRDELKEEGLGVTKATIPMVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAAGYGG 240

Query: 299 TAQQPRPPIPFMPWPHTQAQQQQQQQTQQQSN 326
             QQPRPP+ FMPWP TQ QQQQQQ  QQQS+
Sbjct: 241 -QQQPRPPMAFMPWPQTQPQQQQQQPQQQQSD 271

[Close]

BLAST of Cp4.1LG04g06850 vs. NCBI nr
Match: gi|567859196|ref|XP_006422281.1| (hypothetical protein CICLE_v10007003mg [Citrus clementina])

HSP 1 Score: 395.6 bits (1015), Expect = 8.6e-107
Identity = 215/271 (79.34%), Postives = 237/271 (87.45%), Query Frame = 1


Query: 59  MDQSERSQHQQQSQQA-AGGV--GAGQLPYSNPYQTAPMGASGTPAITIP-PTQQPSSFS 118
           MDQS+++Q QQQ QQ    GV  GAGQ+ Y  PY TAP+ ASGTPA+ +P PTQ PS+F+
Sbjct: 1   MDQSDQTQQQQQQQQQPVMGVVAGAGQMSYP-PYHTAPLVASGTPAVAVPSPTQPPSTFA 60

Query: 119 NSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKAD 178
           +SPHQLA+QQAQHFH QQQQQQQQQLQ+FW+NQMQEIEQT DFKNHSLPLARIKKIMKAD
Sbjct: 61  SSPHQLAYQQAQHFHHQQQQQQQQQLQMFWSNQMQEIEQTADFKNHSLPLARIKKIMKAD 120

Query: 179 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 238
           EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV
Sbjct: 121 EDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 180

Query: 239 DIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSAT 298
           DIIPRDELKEEGLG+TK ++PVVGSP D+P YYVP QHPV  TGMIMGK +DQA +YS  
Sbjct: 181 DIIPRDELKEEGLGVTKGALPVVGSPGDMPLYYVPPQHPVGHTGMIMGKPVDQAALYS-- 240

Query: 299 AQQPRPPIPFMPWPHTQAQQQQQQQTQQQSN 326
            QQPRPP+ FMPWP +Q+Q QQQQQ QQQ N
Sbjct: 241 GQQPRPPVAFMPWPQSQSQAQQQQQPQQQQN 268

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g06850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFYC2_ARATH	1.1e-66	69.16	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2...	[more]
NFYC9_ARATH	1.5e-55	55.98	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2...	[more]
NFYC1_ARATH	4.2e-53	69.33	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1...	[more]
NFYC3_ARATH	4.6e-52	54.58	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2...	[more]
NFYC4_ARATH	6.7e-51	55.40	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2...	[more]

BLAST of Cp4.1LG04g06850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5U1_CUCSA	1.3e-130	94.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051420 PE=4 SV=1	[more]
W9QHS7_9ROSA	4.9e-109	81.34	Nuclear transcription factor Y subunit C-2 OS=Morus notabilis GN=L484_004059 PE=...	[more]
B9RHZ1_RICCO	2.4e-108	81.99	Ccaat-binding transcription factor, putative OS=Ricinus communis GN=RCOM_1574650...	[more]
A0A067F2I1_CITSI	6.0e-107	79.34	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024265mg PE=4 SV=1	[more]
V4SET8_9ROSI	6.0e-107	79.34	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007003mg PE=4 SV=1	[more]

BLAST of Cp4.1LG04g06850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56170.1	6.4e-68	69.16	nuclear factor Y, subunit C2	[more]
AT1G08970.4	8.6e-57	55.98	nuclear factor Y, subunit C9	[more]
AT3G48590.1	2.3e-54	69.33	nuclear factor Y, subunit C1	[more]
AT1G54830.2	2.6e-53	54.58	nuclear factor Y, subunit C3	[more]
AT5G63470.1	3.7e-52	55.40	nuclear factor Y, subunit C4	[more]

BLAST of Cp4.1LG04g06850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438149\|ref\|XP_004136852.1\|	1.9e-130	94.01	PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis sativus]	[more]
gi\|1009129970\|ref\|XP_015882049.1\|	8.3e-110	80.66	PREDICTED: nuclear transcription factor Y subunit C-2 [Ziziphus jujuba]	[more]
gi\|703072226\|ref\|XP_010089230.1\|	7.0e-109	81.34	Nuclear transcription factor Y subunit C-2 [Morus notabilis]	[more]
gi\|255544598\|ref\|XP_002513360.1\|	3.5e-108	81.99	PREDICTED: nuclear transcription factor Y subunit C-2 [Ricinus communis]	[more]
gi\|567859196\|ref\|XP_006422281.1\|	8.6e-107	79.34	hypothetical protein CICLE_v10007003mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold
IPR003958	CBFA_NFYB_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g06850.1	Cp4.1LG04g06850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 161..224 score: 3.3
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 153..225 score: 2.8
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 125..233 score: 8.89
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 93..329 score: 6.0E
None	No IPR available	PANTHER	PTHR10252:SF49	SUBFAMILY NOT NAMED	coord: 93..329 score: 6.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g06850	Cucsa.345940	Cucumber (Gy14) v1	cgycpeB0904
Cp4.1LG04g06850	CmaCh11G016190	Cucurbita maxima (Rimu)	cmacpeB154
Cp4.1LG04g06850	CmaCh19G002860	Cucurbita maxima (Rimu)	cmacpeB538
Cp4.1LG04g06850	CmoCh19G003130	Cucurbita moschata (Rifu)	cmocpeB493
Cp4.1LG04g06850	CmoCh11G015110	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g06850	Cla004399	Watermelon (97103) v1	cpewmB631
Cp4.1LG04g06850	Csa7G051420	Cucumber (Chinese Long) v2	cpecuB695
Cp4.1LG04g06850	MELO3C018689	Melon (DHL92) v3.5.1	cpemeB604
Cp4.1LG04g06850	CSPI07G05080	Wild cucumber (PI 183967)	cpecpiB697
Cp4.1LG04g06850	Lsi03G008200	Bottle gourd (USVL1VR-Ls)	cpelsiB544
Cp4.1LG04g06850	MELO3C018689.2	Melon (DHL92) v3.6.1	cpemedB715
Cp4.1LG04g06850	CsaV3_7G006030	Cucumber (Chinese Long) v3	cpecucB0868
Cp4.1LG04g06850	Bhi05G000628	Wax gourd	cpewgoB0853
Cp4.1LG04g06850	CsGy7G004640	Cucumber (Gy14) v2	cgybcpeB969
Cp4.1LG04g06850	Carg23996	Silver-seed gourd	carcpeB1035
Cp4.1LG04g06850	Carg24587	Silver-seed gourd	carcpeB0920

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g06850	Cp4.1LG15g02590	Cucurbita pepo (Zucchini)	cpecpeB268

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g06850	Watermelon (Charleston Gray)	cpewcgB575
Cp4.1LG04g06850	Watermelon (Charleston Gray)	cpewcgB578
Cp4.1LG04g06850	Cucumber (Gy14) v2	cgybcpeB842
Cp4.1LG04g06850	Cucumber (Chinese Long) v3	cpecucB0861