Lsi03G005970 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTATTAAAGGTATATTATATGGACCAAGAAAGCCTCATCTATTCTCTTCAACCTCATCCTCAAAACTCAAAACTCAAAACTCTCACTCCGATGAGTTCCATCGGCCAAAGCATTCTCATGGCCCTCGCCGTCACTCTCAACAAATTCGCTTCCTCTAACGTTCAATCCGTTCAGAGAAACCAAGCCAACAAGCCTCCCACCACCACCACCGCCGCCACTGCCACCGCCGGTTCTGCAATCGGAAGAAGAGGCCTCCTCTTGTCCGCCGTTGCTTCCACCGCCGCCGCCGCTCCTGAAGAAGCCGTCGACTCCAGAACCGAGCTGCTAAAAAGTGCTGCATTCTTCTCTTTCTTCTTCTTTTTGAGGGCTTTCTTTTGTGTTTTAATTTTTCTGCTTTTGGAAAAATTATTCTTTTTTTCCTTTTGTACCGAAGAAAATTAATTTTGGGAGAAGCATTGCAATGAGTTCATCTGTTTTTGTTATCCAATTTCTTTCAAGAATATCGGAGTTTGTTGTGGATAAACCAAATTTATTTATTTTTCAAAAAAAAAAAAAAAAAACTCAGTGAATTAGTGGATGCAATATGACTTTTTTTTTTTTTTTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTTTTTTAAATGTAGTTTCGTAGATTTTCGTCCATCTGTACCACCTTACAAATCGATTTCGTGATTTCTTATCAAAGTTGAGTTTTAAATAAGGTATGTATTACTATGAAAAATCATATGGTAGTAGATTAAAAAATTATAATCATGTACTTATAATTTTTTTTTTTAAATTTTTCCAGTTTAGTAATAGAAGTCTATCACCCATAATTGATTGACTTTATTAGTACAAATTTTTAGAGTTGAATACAATAATAGTTAAATTAGAGTTTAGTCTATAATATTTTTAGTGTTGTATATTTAGAAGGTGTTTAGAGTACTGAGTTGAGTTATGAAGTCTAGAGTTAATATATTGAAGTTAGGAAGTCTGTGTTTGAGGTACAGAGTTGTGAACATGAAATTCTTTGATAAATATGTAAAAAAGAGAAAAATGGAAAGATGGAGTTCCTCGATAAATGTGCAAATTTAAATAATTTGGTAAAGTTGAGTTATTTAACACCGATTTATGAAGTCAGTGTGCCAAACATCCCCTTTAGTATTTGAACTTTAGAAAGTATCTATAGATATATGAACTTCTAAAAGTATTTAATAGATTTCTTAATTTTCAATTTTGTGTTTAACATTGACCAATTCGAGTTTTTTTTTTTTGGGAAAATTTTCACAAATAGAAAAAATGTTAGACTATTTACAGAAAATAGCAAAAAAAAAATACTAATAAACATTGATAGACTTCTATCAGCATCTATCAGTGATAGACTTCTATCATTTCTATCACTGATAGACCTTGATAAACTTCTATCAATGTCTATCACAATTATCTAAAAAATTTGTTATTTTGTGTAAATAGTTTCCCTTATTTTTCTATTTTTAAAAAGTTCCCTTTTTTTTCTTTTATAATTCATATAACCGACACAAAATTAAAAGTTTGGGTTCTTTCAACATAAGTTTCATTTTGATAATTTTTTAGTATGTTTGGGACTTATTACTATATAAATAAGAAGTTAAAGGGATCTATTAATTAGAAATAAAATAAAATTGAGAGTACTTGACTTATTAGACATTTAATAAACATTATTGGATGATTCATTTTTATTCTATTGTATAAATTGTCACAGTTAACCATGATTAACATACATTTTATTTTTCTTATTATATGTATATGAATTTAATATTTGAATTCCTAGGAACTATGCTACACTTTGCTCTAATTAATGACTTTCCTTACAATCCAAATATCTTTTGTATTAGGGTACCTCAAGAAGTCTGAAGATAACAAAGAAAAGAATGACAAGGAGGTAATTTTTTTGTAATTTTGCCTATATTCTATTTTATTAAAAAATTTAAATCCTTATTTTCTAGTGTTCTAGAAAAATGATTTAAATATGATCGTTTATGGTCTAACTATCACTCTATAATATATGATACAAAAAAATTTGTAATTTTAACAGAGATTGGAAAGTTACTACAAGCGAAATT CTTTTATTAAAGGTATATTATATGGACCAAGAAAGCCTCATCTATTCTCTTCAACCTCATCCTCAAAACTCAAAACTCAAAACTCTCACTCCGATGAGTTCCATCGGCCAAAGCATTCTCATGGCCCTCGCCGTCACTCTCAACAAATTCGCTTCCTCTAACGTTCAATCCGTTCAGAGAAACCAAGCCAACAAGCCTCCCACCACCACCACCGCCGCCACTGCCACCGCCGGTTCTGCAATCGGAAGAAGAGGCCTCCTCTTGTCCGCCGTTGCTTCCACCGCCGCCGCCGCTCCTGAAGAAGCCGTCGACTCCAGAACCGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGATAACAAAGAAAAGAATGACAAGGAGGTAATTTTTTTGTAATTTTGCCTATATTCTATTTTATTAAAAAATTTAAATCCTTATTTTCTAGTGTTCTAGAAAAATGATTTAAATATGATCGTTTATGGTCTAACTATCACTCTATAATATATGATACAAAAAAATTTGTAATTTTAACAGAGATTGGAAAGTTACTACAAGCGAAATT ATGGACCAAGAAAGCCTCATCTATTCTCTTCAACCTCATCCTCAAAACTCAAAACTCAAAACTCTCACTCCGATGAGTTCCATCGGCCAAAGCATTCTCATGGCCCTCGCCGTCACTCTCAACAAATTCGCTTCCTCTAACGTTCAATCCGTTCAGAGAAACCAAGCCAACAAGCCTCCCACCACCACCACCGCCGCCACTGCCACCGCCGGTTCTGCAATCGGAAGAAGAGGCCTCCTCTTGTCCGCCGTTGCTTCCACCGCCGCCGCCGCTCCTGAAGAAGCCGTCGACTCCAGAACCGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGATAACAAAGAAAAGAATGACAAGGAGGTAATTTTTTTGTAA MDQESLIYSLQPHPQNSKLKTLTPMSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKEVIFL
BLAST of Lsi03G005970 vs. TrEMBL
Match: A0A061E0K5_THECC (Cell cycle progression protein 1 OS=Theobroma cacao GN=TCM_007250 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.4e-16 Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 1
BLAST of Lsi03G005970 vs. TrEMBL
Match: B9S828_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1384420 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.1e-16 Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 1
BLAST of Lsi03G005970 vs. TrEMBL
Match: W9R137_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011132 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.5e-15 Identity = 60/96 (62.50%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of Lsi03G005970 vs. TrEMBL
Match: B9GIB3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s29940g PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.7e-15 Identity = 55/96 (57.29%), Postives = 66/96 (68.75%), Query Frame = 1
BLAST of Lsi03G005970 vs. TrEMBL
Match: A0A0B0PWM0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09324 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-14 Identity = 64/107 (59.81%), Postives = 74/107 (69.16%), Query Frame = 1
BLAST of Lsi03G005970 vs. TAIR10
Match: AT1G49975.1 (AT1G49975.1 INVOLVED IN: photosynthesis) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 1
BLAST of Lsi03G005970 vs. NCBI nr
Match: gi|659110103|ref|XP_008455049.1| (PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]) HSP 1 Score: 113.6 bits (283), Expect = 2.4e-22 Identity = 72/96 (75.00%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of Lsi03G005970 vs. NCBI nr
Match: gi|449438315|ref|XP_004136934.1| (PREDICTED: uncharacterized protein LOC101214221 [Cucumis sativus]) HSP 1 Score: 110.9 bits (276), Expect = 1.6e-21 Identity = 72/96 (75.00%), Postives = 76/96 (79.17%), Query Frame = 1
BLAST of Lsi03G005970 vs. NCBI nr
Match: gi|590687474|ref|XP_007042674.1| (Cell cycle progression protein 1 [Theobroma cacao]) HSP 1 Score: 93.2 bits (230), Expect = 3.4e-16 Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 1
BLAST of Lsi03G005970 vs. NCBI nr
Match: gi|255562272|ref|XP_002522144.1| (PREDICTED: uncharacterized protein LOC8273856 [Ricinus communis]) HSP 1 Score: 92.8 bits (229), Expect = 4.5e-16 Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 1
BLAST of Lsi03G005970 vs. NCBI nr
Match: gi|657951247|ref|XP_008351778.1| (PREDICTED: uncharacterized protein LOC103415213 [Malus domestica]) HSP 1 Score: 92.0 bits (227), Expect = 7.6e-16 Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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