Lsi03G002750 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G002750
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionLOB domain-containing protein, putative
Locationchr03 : 3380756 .. 3383615 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTATTATTATTATTATTATTATTATTATTATTATTATTATTAATTATTTAATTTGCTGTATATCTTGCCTTTTAAGTACTCTCCCTTTCTTTCCCAAGTTTCTTCTTCTTCTCCCTTCATCTGAAAATTCTCTCCTTTTCTCCTCCTCCTCCCCCTCTTCTTCTTCTTCCATTCAATTGTACCAGAAAAAGTGAATGCTTCAATGTCAAGAGAAAGGTAAGTATACCAAATCATATGTTTAATTTTATGTAGACAGTAAACTACGTAAATCTTTGTGTCGTTCATTCATCTTTAAATTTAATTAACCAATCAATAACATATTGTCTTGATTTCGAGTCTAGCAGAGAATTACAAGAGGTGGATGAGACCGGGAAGAAAATAAAGAGGGAAATTGATCAAGGTTTTTATGATTCTCCATTAATGGGAAGAAGGCACATTTTAAGTCCAAATGGGACTTTGAATACAATAACGCCATGTGCAGCTTGTAAGCTTTTAAGAAGAAGGTGTGCTCAAGAATGTCCATTTTCTCCTTATTTTTCTCCACATGAACCTCACAAATTTGCTTCGGTTCATAAAGTTTTTGGTGCAAGCAACGTCGCTAAGATGCTCATGGTAAAAAACCCTAATCAAAATTTCTCTTCTAATTTACTATCAATAATTGCCTTGTTTTTAATCTACTGAGCAATTTCTGCAAGTTGTATACATAGATCTAGTAATTAGTTATATTAAATTAATAAAAGTAGATCTCACTTTTAATTTTCACCATATCATTTAAGAATATGAAACGTACGATATATAAATTTAAAATTACGTGAATAGGTATGGTAGATCTAGTATACTGTAGTTTTGTCTAGCTAAATTTAGTACTTTTATTTTTTAAAAAAATTATACAATTTTAAATTTTGTGTTTATTATTCTGAATTCCATCCAATCAAATTATTTCGTGTGGCATTAGAAATTAGATATAACATTAAAAGTTGAATGTCGGGTTGATAAAACGTTTTAGTTTCTGTTTTCTATTATCATGTTTTCAATTTTTTGAGAAAAAGTGCTTGATAACAGTTGGTAGTATATACATTTCTTATTTTTCATTTTTTAGAAATATATTCAAAAATAATTTTAGAAATAGCAAAATCAATTTTACTAACGTACAATTTTTATATTTAATTATAAAAATGTATTTTCATGTGAAATTTGTACATTAATTTTTTATTTCGAAATTAAAGAAAAACAAAAAAATAATTAGAAACTACTATAACCATGTCTTCTTAAGGGAAAAAAAGAAGAATAAATAATTAGGTTAAGACAGTTTTCTATTTCCCTATCTAAAAAGAGAAAAGGAGGACACAATAAATAAAATTTTAGCGCCGTTTGATAAATATCTATTTTTTTTTTAAATTAAGCTTAAACACTATTTTAATTTATTAGTTTCTACATTTTAAGAGTTTTTAAAATTTTAAAATTAAATAAATTTCCTCTCAATTTTTTACCATAAAAAAAAAACTATTTTTTTTTTAGTTTTGAAAATTTAGCCTTTTTTTTTATAAAAAAAATATTAGTATAGAATAGATAACTAAACAATAAATTTAAAAGTAGAATAAGTGTTCATAGGCTTAATTTTCAAAAACTAAAAACTAAGGCTCTATTTGGACAATTGTTGAATTCTTAGCCAAATTCCAAAAATAAAAACAAGTTTTTAAAAACTATTTTTTTTTATTTTTCAAATTTTGGTTTGGTTTTTTAAACCATTGGAAAAAATTTAGAGATGGAAACAGTGTCTATAGACTTAATTTTCAGAAACTAAATGGTTACCAAACAGAGTCTAAATGTTACAAACGAGACCTAAAAAAATAACTAATTTTTAAAAATCACGATTAAATAAATAGGGAAAAAACAAGCACAATTTTCAAAAAATTAAAAACTAAAACCAAATAAGATTATCATAATTTTTTTTCGTATAACGATAAACAATTACCATCTTGAAACTTTAAGGTCATAATAAGTAAGCCACATCAAACTACCGAGTTTTTCTCTAACTTGCTTTTAGTAATTTTTCACCAATCAATCTACATCACTTTTGGTCTTGGAGATGATGATAAGGGTGTTAGACATATGTTAATCTAGTTGAAATGTTTCGGTGCACCTACTAATCTCTCTTGTCTTATGAATATTTAAAATGAAAAATGTAAGCTACATATGTATAGTTGATCATATATTATATTTAGTTATTGAGTGAATTTTATGTTTAAATATTATTGTAGGAGGTACCGGAGAGTCAAAGAGCGGACGCAGCAAACAGCCTCGTATATGAAGCCAATCTAAGGCTGAGAGATCCTGTGTACGGCTGCATGGGCGCCATTTCTGCTCTTCAACACCAACTTCAAACCTTACAATCTGACCTCAATGCCATCAGAACCCAGATTTTCAACTTCAAATTTACACATCATAATAATTCACACATTCCTAATTTCATTTCTGCCGCCGCAACGCCGCCTGCTGCCCCGCCCACTCCGCCACATTCTCAGCCGCCTCCGCTCTCTCTTCCGCCGCCTCTTCCTCCCTCCTCCTCCATCTTTTCCCCTCCCATTATCACTACTACTACCACTGCCCCTGAATTAATTAACCCTATCTCAACAACTCAACATATTTCCTACTTTGGTTAAACTAATTAATTCTAGTTTGTGTCGTTCCTTTGAGATGATGTTGAGTGAAAATAGTTAGTGTTATATTACTTTTGATTTTTATTTCTCTTTATTACTATTTACTTACCAAACATTAGGAAAAATATAATTTCAACCAAATGTGTTTCTAATTACGTGCTAAAAAGTACTTTTCAACCTTCAAAAACCCATCTTAAA

mRNA sequence

TATTATTATTATTATTATTATTATTATTATTATTATTATTATTAATTATTTAATTTGCTGTATATCTTGCCTTTTAAGTACTCTCCCTTTCTTTCCCAAGTTTCTTCTTCTTCTCCCTTCATCTGAAAATTCTCTCCTTTTCTCCTCCTCCTCCCCCTCTTCTTCTTCTTCCATTCAATTGTACCAGAAAAAGTGAATGCTTCAATGTCAAGAGAAAGAGAATTACAAGAGGTGGATGAGACCGGGAAGAAAATAAAGAGGGAAATTGATCAAGGTTTTTATGATTCTCCATTAATGGGAAGAAGGCACATTTTAAGTCCAAATGGGACTTTGAATACAATAACGCCATGTGCAGCTTGTAAGCTTTTAAGAAGAAGGTGTGCTCAAGAATGTCCATTTTCTCCTTATTTTTCTCCACATGAACCTCACAAATTTGCTTCGGTTCATAAAGTTTTTGGTGCAAGCAACGTCGCTAAGATGCTCATGGAGGTACCGGAGAGTCAAAGAGCGGACGCAGCAAACAGCCTCGTATATGAAGCCAATCTAAGGCTGAGAGATCCTGTGTACGGCTGCATGGGCGCCATTTCTGCTCTTCAACACCAACTTCAAACCTTACAATCTGACCTCAATGCCATCAGAACCCAGATTTTCAACTTCAAATTTACACATCATAATAATTCACACATTCCTAATTTCATTTCTGCCGCCGCAACGCCGCCTGCTGCCCCGCCCACTCCGCCACATTCTCAGCCGCCTCCGCTCTCTCTTCCGCCGCCTCTTCCTCCCTCCTCCTCCATCTTTTCCCCTCCCATTATCACTACTACTACCACTGCCCCTGAATTAATTAACCCTATCTCAACAACTCAACATATTTCCTACTTTGGTTAAACTAATTAATTCTAGTTTGTGTCGTTCCTTTGAGATGATGTTGAGTGAAAATAGTTAGTGTTATATTACTTTTGATTTTTATTTCTCTTTATTACTATTTACTTACCAAACATTAGGAAAAATATAATTTCAACCAAATGTGTTTCTAATTACGTGCTAAAAAGTACTTTTCAACCTTCAAAAACCCATCTTAAA

Coding sequence (CDS)

ATGTCAAGAGAAAGAGAATTACAAGAGGTGGATGAGACCGGGAAGAAAATAAAGAGGGAAATTGATCAAGGTTTTTATGATTCTCCATTAATGGGAAGAAGGCACATTTTAAGTCCAAATGGGACTTTGAATACAATAACGCCATGTGCAGCTTGTAAGCTTTTAAGAAGAAGGTGTGCTCAAGAATGTCCATTTTCTCCTTATTTTTCTCCACATGAACCTCACAAATTTGCTTCGGTTCATAAAGTTTTTGGTGCAAGCAACGTCGCTAAGATGCTCATGGAGGTACCGGAGAGTCAAAGAGCGGACGCAGCAAACAGCCTCGTATATGAAGCCAATCTAAGGCTGAGAGATCCTGTGTACGGCTGCATGGGCGCCATTTCTGCTCTTCAACACCAACTTCAAACCTTACAATCTGACCTCAATGCCATCAGAACCCAGATTTTCAACTTCAAATTTACACATCATAATAATTCACACATTCCTAATTTCATTTCTGCCGCCGCAACGCCGCCTGCTGCCCCGCCCACTCCGCCACATTCTCAGCCGCCTCCGCTCTCTCTTCCGCCGCCTCTTCCTCCCTCCTCCTCCATCTTTTCCCCTCCCATTATCACTACTACTACCACTGCCCCTGAATTAATTAACCCTATCTCAACAACTCAACATATTTCCTACTTTGGTTAA

Protein sequence

MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHILSPNGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHHNNSHIPNFISAAATPPAAPPTPPHSQPPPLSLPPPLPPSSSIFSPPIITTTTTAPELINPISTTQHISYFG
Homology
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BLAST of Lsi03G002750 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 5.4e-60
Identity = 137/215 (63.72%), Postives = 155/215 (72.09%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMG-RRHILSPNGTLNTITPCAACKLLRRRC 60
           MSRERE    +E GKKIKRE D   +   + G RR +  P GTLNTITPCAACKLLRRRC
Sbjct: 1   MSRERE--RFEEIGKKIKREADA--WPHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRC 60

Query: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDP 120
           AQECPFSPYFSPHEPHKFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISALQHQLQTLQSDLNAIRTQIFNFK-------FTHHNNSHIPNF-----ISA 180
           VYGCMGAISALQ Q+Q LQ++L A+R++I  +K           +NS +  F     +S 
Sbjct: 121 VYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQVAGFHNSGGVSV 180

Query: 181 AATPPAAPPTPPHSQPPPLSLPPPLPPSSSIFSPP 203
            A PP  P TPP     P +  PP  PSS +FS P
Sbjct: 181 IAPPPQRPTTPPQ----PTTAHPP-SPSSCVFSQP 206

[Close]
BLAST of Lsi03G002750 vs. Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 3.1e-55
Identity = 133/235 (56.60%), Postives = 163/235 (69.36%), Query Frame = 1 

Query: 1   MSRERE-LQEVDETGKKIKRE-IDQGFYDSPLMG-RRHILSPNG-TLNTITPCAACKLLR 60
           MSRERE   E  ET KKIK++   +   D  +MG RRH+  P G TLNT+TPCAACKLLR
Sbjct: 1   MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLR 60

Query: 61  RRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRL 120
           RRCA+ECPFSPYFSPHEPHKFA+VHKVFGASNV+KML+EV ESQR DAANSLVYEANLRL
Sbjct: 61  RRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRL 120

Query: 121 RDPVYGCMGAISALQHQLQTLQSDLNAIRTQI-----------------FNFKFTHHNNS 180
           RDP+YGCMGAISALQH +Q+LQS+L  +RT+I                 FN   T  + S
Sbjct: 121 RDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVS 180

Query: 181 HIPNFISAAATPPAAPPTPPHSQPPPL----SLPPPLPPSSSIFSPPIITTTTTA 211
              + +++A   P  PP PP  +PP L      PPP PP  S+ SP ++ +++++
Sbjct: 181 CDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPP-VSLPSPSMVVSSSSS 234

[Close]
BLAST of Lsi03G002750 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 4.6e-35
Identity = 69/102 (67.65%), Postives = 84/102 (82.35%), Query Frame = 1 

Query: 47  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 106
           +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNV+KML E+P  QRADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 107 SLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQI 149
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ  L   + +I
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]
BLAST of Lsi03G002750 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 1 

Query: 44  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 103
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 104 AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFK 153
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  ++++  ++
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

[Close]
BLAST of Lsi03G002750 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.3e-33
Identity = 72/136 (52.94%), Postives = 95/136 (69.85%), Query Frame = 1 

Query: 47  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 106
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV KML E+P  QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 107 SLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHHNN----SHIP 166
           S+VYEAN R+RDPVYGC+GAIS+LQ Q+  LQ+ L   + ++ + +     N       P
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 167 NFISAAATPPAAPPTP 179
           +  S++ +P +   +P
Sbjct: 132 DSPSSSGSPSSKQVSP 147

[Close]
BLAST of Lsi03G002750 vs. TrEMBL
Match: A0A0A0K8P6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013950 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 3.7e-92
Identity = 198/255 (77.65%), Postives = 209/255 (81.96%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQG--FYDSPLMGRRH-------ILSPNGT--------L 60
           MSRERELQEVDE GKKIKREI+    FYD  LMGRR+       ILS + +        L
Sbjct: 1   MSRERELQEVDEIGKKIKREIESSNLFYDPNLMGRRNNNNNNNLILSSSSSSQSSGISNL 60

Query: 61  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 120
           NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPE+QRAD
Sbjct: 61  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRAD 120

Query: 121 AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHH--NNSHI 180
           AANSLVYEANLRLRDPVYGCMGAISALQHQL TLQSDLNAI TQIF +KFTHH  N    
Sbjct: 121 AANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSS 180

Query: 181 PNFI--SAAATPPAAPPTPPHSQPPPLSLPPPLPP---SSSIFSPPIIT--TTTTAPELI 228
           PNF+  S AATPP APPTPPHSQPPPLSLPPPLPP   SSS+FSPPIIT  T+TT  ELI
Sbjct: 181 PNFMAPSPAATPPVAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTVVELI 240

[Close]
BLAST of Lsi03G002750 vs. TrEMBL
Match: A0A059BI15_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03121 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.6e-66
Identity = 150/235 (63.83%), Postives = 172/235 (73.19%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHILSPNGTLNTITPCAACKLLRRRCA 60
           MSRE   +  DE GKKIKR+ D   +   LMGRRH+L P GTLNTITPCAACKLLRRRCA
Sbjct: 1   MSRESR-ERFDEIGKKIKRDGDASHHH--LMGRRHMLGPPGTLNTITPCAACKLLRRRCA 60

Query: 61  QECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPV 120
           QECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPV
Sbjct: 61  QECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPV 120

Query: 121 YGCMGAISALQHQLQTLQSDLNAIRTQIFNFKF--------THHNNSHIPNFISAAATPP 180
           YGCMGAISALQ Q+Q+LQ++LNA+R++I  +K+        T H     P  +S AA PP
Sbjct: 121 YGCMGAISALQQQIQSLQAELNAVRSEILKYKYREAGIISPTSHVTLLSPGTVSIAAPPP 180

Query: 181 AAPPTPPHSQPPPLSLPPPLPPSSSIFSPPIITTTTTAPELINPISTTQHISYFG 228
             PP     Q  P SLPPPLPP+S   SPP + T          IS ++++SYFG
Sbjct: 181 TPPP-----QSAPTSLPPPLPPAS---SPPSLFTQPGGTTDYGGIS-SENVSYFG 223

[Close]
BLAST of Lsi03G002750 vs. TrEMBL
Match: A0A061FRT3_THECC (LOB domain-containing protein 15 OS=Theobroma cacao GN=TCM_045438 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.6e-66
Identity = 151/230 (65.65%), Postives = 171/230 (74.35%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHILSPNGTLNTITPCAACKLLRRRCA 60
           MSRERE    DE GKKIKRE D     S  MGRRH+L P GTLNTITPCAACKLLRRRCA
Sbjct: 1   MSRERE--RFDEIGKKIKREAD---VSSHHMGRRHMLGPPGTLNTITPCAACKLLRRRCA 60

Query: 61  QECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPV 120
           QECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPV
Sbjct: 61  QECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPV 120

Query: 121 YGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHHN---NSHIPNFISAAATPPAAPPT 180
           YGCMGAISALQ Q+Q+LQ++LNA+R +I  +K    N   +SH+    S A +  A P  
Sbjct: 121 YGCMGAISALQQQVQSLQAELNAVRAEILKYKCREANLIPSSHVALLSSGAVSVAALPSA 180

Query: 181 PPHSQPPPLSLPPPLPPSSSIFSPPIITTTTTAPELINPISTTQHISYFG 228
           P H  PPP   PPPLPP+SS  S  + T  TTA +      + +++SYFG
Sbjct: 181 PTHPPPPP--PPPPLPPTSS--SSSMYTQPTTAADY--STISNENVSYFG 219

[Close]
BLAST of Lsi03G002750 vs. TrEMBL
Match: B9S4B8_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.8e-66
Identity = 152/234 (64.96%), Postives = 175/234 (74.79%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHILSPNGTLNTITPCAACKLLRRRCA 60
           MSRERE    DE GKKIKREID     S  MGRRH+L P GTLNTITPCAACKLLRRRCA
Sbjct: 1   MSRERE--RFDEIGKKIKREIDA----SSQMGRRHMLGPPGTLNTITPCAACKLLRRRCA 60

Query: 61  QECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPV 120
           QECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPV
Sbjct: 61  QECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPV 120

Query: 121 YGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHHN---NSHI----PNFISAAATPPA 180
           YGCMGAISALQ Q+QTLQ++LNA+R +I  +K+   N   ++H+       +S AAT  +
Sbjct: 121 YGCMGAISALQQQIQTLQAELNAVRAEILKYKYREANILPSTHVALLSSGAVSVAATSQS 180

Query: 181 APPTPPHSQPPPLSLPPPLPPSSSIFSPPIITTTTTAPELINPISTTQHISYFG 228
             P PP   PPP   PPPLPP+SS  S  + T   T     + IS ++++S+FG
Sbjct: 181 LTPPPPTPPPPP--PPPPLPPTSS--STSLYTHQPTTVADYSSIS-SENVSFFG 223

[Close]
BLAST of Lsi03G002750 vs. TrEMBL
Match: A0A067JNV9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03351 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.9e-65
Identity = 151/236 (63.98%), Postives = 169/236 (71.61%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHILSPNGTLNTITPCAACKLLRRRCA 60
           MSRERE    DE GKKIKRE D     S  MGRRH+L P GTLNTITPCAACKLLRRRCA
Sbjct: 1   MSRERE--RFDEIGKKIKRETDA----SSQMGRRHMLGPPGTLNTITPCAACKLLRRRCA 60

Query: 61  QECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPV 120
           QECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPV
Sbjct: 61  QECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPV 120

Query: 121 YGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHHN-----NSHI----PNFISAAATP 180
           YGCMGAISALQ Q+Q+LQ++LNAIR +I  +K+   N     + HI       +S     
Sbjct: 121 YGCMGAISALQQQVQSLQAELNAIRAEILKYKYREANIIPSSHQHIALLSSGAVSVVTQS 180

Query: 181 PAAPPTPPHSQPPPLSLPPPLPPSSSIFSPPIITTTTTAPELINPISTTQHISYFG 228
           P+  P  P   PPP   PPPLPP+SS  S  I T   T+      IS  +H+S+FG
Sbjct: 181 PSLTPQQPPQPPPPPPPPPPLPPTSS-SSSSIYTHQPTSAADYTTIS-NEHVSFFG 228

[Close]
BLAST of Lsi03G002750 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-61
Identity = 137/215 (63.72%), Postives = 155/215 (72.09%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMG-RRHILSPNGTLNTITPCAACKLLRRRC 60
           MSRERE    +E GKKIKRE D   +   + G RR +  P GTLNTITPCAACKLLRRRC
Sbjct: 1   MSRERE--RFEEIGKKIKREADA--WPHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRC 60

Query: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDP 120
           AQECPFSPYFSPHEPHKFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISALQHQLQTLQSDLNAIRTQIFNFK-------FTHHNNSHIPNF-----ISA 180
           VYGCMGAISALQ Q+Q LQ++L A+R++I  +K           +NS +  F     +S 
Sbjct: 121 VYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQVAGFHNSGGVSV 180

Query: 181 AATPPAAPPTPPHSQPPPLSLPPPLPPSSSIFSPP 203
            A PP  P TPP     P +  PP  PSS +FS P
Sbjct: 181 IAPPPQRPTTPPQ----PTTAHPP-SPSSCVFSQP 206

[Close]
BLAST of Lsi03G002750 vs. TAIR10
Match: AT2G30340.1 (AT2G30340.1 LOB domain-containing protein 13)

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-56
Identity = 133/235 (56.60%), Postives = 163/235 (69.36%), Query Frame = 1 

Query: 1   MSRERE-LQEVDETGKKIKRE-IDQGFYDSPLMG-RRHILSPNG-TLNTITPCAACKLLR 60
           MSRERE   E  ET KKIK++   +   D  +MG RRH+  P G TLNT+TPCAACKLLR
Sbjct: 1   MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLR 60

Query: 61  RRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRL 120
           RRCA+ECPFSPYFSPHEPHKFA+VHKVFGASNV+KML+EV ESQR DAANSLVYEANLRL
Sbjct: 61  RRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRL 120

Query: 121 RDPVYGCMGAISALQHQLQTLQSDLNAIRTQI-----------------FNFKFTHHNNS 180
           RDP+YGCMGAISALQH +Q+LQS+L  +RT+I                 FN   T  + S
Sbjct: 121 RDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVS 180

Query: 181 HIPNFISAAATPPAAPPTPPHSQPPPL----SLPPPLPPSSSIFSPPIITTTTTA 211
              + +++A   P  PP PP  +PP L      PPP PP  S+ SP ++ +++++
Sbjct: 181 CDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPP-VSLPSPSMVVSSSSS 234

[Close]
BLAST of Lsi03G002750 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-36
Identity = 69/102 (67.65%), Postives = 84/102 (82.35%), Query Frame = 1 

Query: 47  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 106
           +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNV+KML E+P  QRADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 107 SLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQI 149
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ  L   + +I
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]
BLAST of Lsi03G002750 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 147.9 bits (372), Expect = 7.6e-36
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 1 

Query: 44  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 103
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 104 AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFK 153
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  ++++  ++
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

[Close]
BLAST of Lsi03G002750 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-34
Identity = 72/136 (52.94%), Postives = 95/136 (69.85%), Query Frame = 1 

Query: 47  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 106
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV KML E+P  QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 107 SLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHHNN----SHIP 166
           S+VYEAN R+RDPVYGC+GAIS+LQ Q+  LQ+ L   + ++ + +     N       P
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 167 NFISAAATPPAAPPTP 179
           +  S++ +P +   +P
Sbjct: 132 DSPSSSGSPSSKQVSP 147

[Close]
BLAST of Lsi03G002750 vs. NCBI nr
Match: gi|659113801|ref|XP_008456762.1| (PREDICTED: LOB domain-containing protein 15-like [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 3.1e-92
Identity = 198/254 (77.95%), Postives = 206/254 (81.10%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQG--FYDSPLMGRRHILSPN--------------GTLN 60
           MSRERE QEVDE GKKIKREI+    FYD  LMGRR+  S N                LN
Sbjct: 1   MSRERESQEVDEIGKKIKREIESSNLFYDPNLMGRRNNNSNNLILSSSSSSQSSGISNLN 60

Query: 61  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADA 120
           TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPE+QRADA
Sbjct: 61  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADA 120

Query: 121 ANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHH--NNSHIP 180
           ANSLVYEANLRLRDPVYGCMGAISALQHQL TLQSDLNAI TQIF +KFTHH  N    P
Sbjct: 121 ANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSSP 180

Query: 181 NFI--SAAATPPAAPPTPPHSQPPPLSLPPPLPP---SSSIFSPPIIT--TTTTAPELIN 228
           NFI  S AATPPAAPPTPPHSQPPPLSLPPPLPP   SSS+FSPPIIT  T+TT  ELIN
Sbjct: 181 NFISPSPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTVVELIN 240

[Close]
BLAST of Lsi03G002750 vs. NCBI nr
Match: gi|449441568|ref|XP_004138554.1| (PREDICTED: LOB domain-containing protein 15 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 5.4e-92
Identity = 198/255 (77.65%), Postives = 209/255 (81.96%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQG--FYDSPLMGRRH-------ILSPNGT--------L 60
           MSRERELQEVDE GKKIKREI+    FYD  LMGRR+       ILS + +        L
Sbjct: 1   MSRERELQEVDEIGKKIKREIESSNLFYDPNLMGRRNNNNNNNLILSSSSSSQSSGISNL 60

Query: 61  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 120
           NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPE+QRAD
Sbjct: 61  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRAD 120

Query: 121 AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHH--NNSHI 180
           AANSLVYEANLRLRDPVYGCMGAISALQHQL TLQSDLNAI TQIF +KFTHH  N    
Sbjct: 121 AANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSS 180

Query: 181 PNFI--SAAATPPAAPPTPPHSQPPPLSLPPPLPP---SSSIFSPPIIT--TTTTAPELI 228
           PNF+  S AATPP APPTPPHSQPPPLSLPPPLPP   SSS+FSPPIIT  T+TT  ELI
Sbjct: 181 PNFMAPSPAATPPVAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTVVELI 240

[Close]
BLAST of Lsi03G002750 vs. NCBI nr
Match: gi|702425098|ref|XP_010067592.1| (PREDICTED: LOB domain-containing protein 15 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 262.7 bits (670), Expect = 6.0e-67
Identity = 152/235 (64.68%), Postives = 173/235 (73.62%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHILSPNGTLNTITPCAACKLLRRRCA 60
           MSRERE    DE GKKIKR+ D   +   LMGRRH+L P GTLNTITPCAACKLLRRRCA
Sbjct: 1   MSRERE--RFDEIGKKIKRDGDASHHH--LMGRRHMLGPPGTLNTITPCAACKLLRRRCA 60

Query: 61  QECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPV 120
           QECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPV
Sbjct: 61  QECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPV 120

Query: 121 YGCMGAISALQHQLQTLQSDLNAIRTQIFNFKF--------THHNNSHIPNFISAAATPP 180
           YGCMGAISALQ Q+Q+LQ++LNA+R++I  +K+        T H     P  +S AA PP
Sbjct: 121 YGCMGAISALQQQIQSLQAELNAVRSEILKYKYREAGIISPTSHVTLLSPGTVSIAAPPP 180

Query: 181 AAPPTPPHSQPPPLSLPPPLPPSSSIFSPPIITTTTTAPELINPISTTQHISYFG 228
             PP     Q  P SLPPPLPP+S   SPP + T          IS ++++SYFG
Sbjct: 181 TPPP-----QSAPTSLPPPLPPAS---SPPSLFTQPGGTTDYGGIS-SENVSYFG 222

[Close]
BLAST of Lsi03G002750 vs. NCBI nr
Match: gi|720003292|ref|XP_010256944.1| (PREDICTED: LOB domain-containing protein 15 [Nelumbo nucifera])

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-66
Identity = 154/241 (63.90%), Postives = 177/241 (73.44%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHI-LSPNGTLNTITPCAACKLLRRRC 60
           MSRERE    DE GKKIKRE D        MGRRHI L P G+LNTITPCAACKLLRRRC
Sbjct: 1   MSRERE--RFDEIGKKIKREADA----LDRMGRRHIMLGPPGSLNTITPCAACKLLRRRC 60

Query: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDP 120
           AQECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDP
Sbjct: 61  AQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISALQHQLQTLQSDLNAIRTQIFNFKFTHHNNSHIPN----------FISAAA 180
           VYGCMGAISALQ Q+Q+LQ++LNA+R +I  +K+   + S IP+           +S AA
Sbjct: 121 VYGCMGAISALQQQVQSLQAELNAVRAEILKYKYRETSASIIPSSHAAALLSSGAVSVAA 180

Query: 181 TPPAAPPTPPHSQPPPLSLPPPLP---PSSSIFSPPIITTTTTAPELINPISTTQHISYF 228
            PP   PTP HSQPPP   PPPLP    SSS+++PP  +T  ++        T +++SYF
Sbjct: 181 PPPVVAPTPSHSQPPP-PPPPPLPASSSSSSMYTPPSSSTDYSS-------ITNENVSYF 227

[Close]
BLAST of Lsi03G002750 vs. NCBI nr
Match: gi|702425094|ref|XP_010067591.1| (PREDICTED: LOB domain-containing protein 15 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 259.2 bits (661), Expect = 6.6e-66
Identity = 150/235 (63.83%), Postives = 172/235 (73.19%), Query Frame = 1 

Query: 1   MSRERELQEVDETGKKIKREIDQGFYDSPLMGRRHILSPNGTLNTITPCAACKLLRRRCA 60
           MSRE   +  DE GKKIKR+ D   +   LMGRRH+L P GTLNTITPCAACKLLRRRCA
Sbjct: 1   MSRESR-ERFDEIGKKIKRDGDASHHH--LMGRRHMLGPPGTLNTITPCAACKLLRRRCA 60

Query: 61  QECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPV 120
           QECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPV
Sbjct: 61  QECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPV 120

Query: 121 YGCMGAISALQHQLQTLQSDLNAIRTQIFNFKF--------THHNNSHIPNFISAAATPP 180
           YGCMGAISALQ Q+Q+LQ++LNA+R++I  +K+        T H     P  +S AA PP
Sbjct: 121 YGCMGAISALQQQIQSLQAELNAVRSEILKYKYREAGIISPTSHVTLLSPGTVSIAAPPP 180

Query: 181 AAPPTPPHSQPPPLSLPPPLPPSSSIFSPPIITTTTTAPELINPISTTQHISYFG 228
             PP     Q  P SLPPPLPP+S   SPP + T          IS ++++SYFG
Sbjct: 181 TPPP-----QSAPTSLPPPLPPAS---SPPSLFTQPGGTTDYGGIS-SENVSYFG 223

The following BLAST results are available for this feature:
BLAST of Lsi03G002750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD15_ARATH5.4e-6063.72LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
LBD13_ARATH3.1e-5556.60LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2[more]
LBD12_ARATH4.6e-3567.65LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD6_ARATH1.3e-3461.47LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1[more]
LBD4_ARATH4.3e-3352.94LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
BLAST of Lsi03G002750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8P6_CUCSA3.7e-9277.65Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013950 PE=4 SV=1[more]
A0A059BI15_EUCGR4.6e-6663.83Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03121 PE=4 SV=1[more]
A0A061FRT3_THECC4.6e-6665.65LOB domain-containing protein 15 OS=Theobroma cacao GN=TCM_045438 PE=4 SV=1[more]
B9S4B8_RICCO7.8e-6664.96LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4... [more]
A0A067JNV9_JATCU3.9e-6563.98Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03351 PE=4 SV=1[more]
BLAST of Lsi03G002750 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40470.13.0e-6163.72 LOB domain-containing protein 15[more]
AT2G30340.11.7e-5656.60 LOB domain-containing protein 13[more]
AT2G30130.12.6e-3667.65 Lateral organ boundaries (LOB) domain family protein[more]
AT1G65620.17.6e-3661.47 Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.12.4e-3452.94 LOB domain-containing protein 4[more]
BLAST of Lsi03G002750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113801|ref|XP_008456762.1|3.1e-9277.95PREDICTED: LOB domain-containing protein 15-like [Cucumis melo][more]
gi|449441568|ref|XP_004138554.1|5.4e-9277.65PREDICTED: LOB domain-containing protein 15 [Cucumis sativus][more]
gi|702425098|ref|XP_010067592.1|6.0e-6764.68PREDICTED: LOB domain-containing protein 15 isoform X2 [Eucalyptus grandis][more]
gi|720003292|ref|XP_010256944.1|1.3e-6663.90PREDICTED: LOB domain-containing protein 15 [Nelumbo nucifera][more]
gi|702425094|ref|XP_010067591.1|6.6e-6663.83PREDICTED: LOB domain-containing protein 15 isoform X1 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G002750.1Lsi03G002750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 48..145
score: 2.0
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 47..148
score: 2
NoneNo IPR availableunknownCoilCoilcoord: 127..147
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 22..199
score: 7.2E
NoneNo IPR availablePANTHERPTHR31301:SF2LOB DOMAIN-CONTAINING PROTEIN 15coord: 22..199
score: 7.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G002750Csa5G219380Cucumber (Chinese Long) v2culsiB361
Lsi03G002750Csa6G013950Cucumber (Chinese Long) v2culsiB444
Lsi03G002750CSPI06G02030Wild cucumber (PI 183967)cpilsiB451
Lsi03G002750Cucsa.144080Cucumber (Gy14) v1cgylsiB231
Lsi03G002750Cucsa.326100Cucumber (Gy14) v1cgylsiB533
Lsi03G002750CmaCh04G001130Cucurbita maxima (Rimu)cmalsiB660
Lsi03G002750CmaCh04G010740Cucurbita maxima (Rimu)cmalsiB659
Lsi03G002750CmaCh15G001570Cucurbita maxima (Rimu)cmalsiB276
Lsi03G002750CmoCh15G001700Cucurbita moschata (Rifu)cmolsiB265
Lsi03G002750CmoCh04G011400Cucurbita moschata (Rifu)cmolsiB648
Lsi03G002750Cla007276Watermelon (97103) v1lsiwmB253
Lsi03G002750Cla006623Watermelon (97103) v1lsiwmB277
Lsi03G002750MELO3C019995Melon (DHL92) v3.5.1lsimeB256
Lsi03G002750ClCG11G005800Watermelon (Charleston Gray)lsiwcgB226
Lsi03G002750ClCG07G004900Watermelon (Charleston Gray)lsiwcgB250
Lsi03G002750MELO3C019995.2Melon (DHL92) v3.6.1lsimedB269
Lsi03G002750Cla97C11G212720Watermelon (97103) v2lsiwmbB222
Lsi03G002750Cla97C07G133310Watermelon (97103) v2lsiwmbB243
Lsi03G002750Bhi04G001849Wax gourdlsiwgoB322
Lsi03G002750Cp4.1LG13g07450Cucurbita pepo (Zucchini)cpelsiB143
Lsi03G002750Cp4.1LG01g11560Cucurbita pepo (Zucchini)cpelsiB341
Lsi03G002750CsGy6G002110Cucumber (Gy14) v2cgyblsiB409
Lsi03G002750Carg00177Silver-seed gourdcarlsiB603
Lsi03G002750Carg02149Silver-seed gourdcarlsiB236
Lsi03G002750CsaV3_6G002180Cucumber (Chinese Long) v3cuclsiB473
Lsi03G002750CsaV3_5G010810Cucumber (Chinese Long) v3cuclsiB386
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi03G002750Lsi04G010330Bottle gourd (USVL1VR-Ls)lsilsiB128
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G002750Wax gourdlsiwgoB298
Lsi03G002750Wax gourdlsiwgoB335
Lsi03G002750Bottle gourd (USVL1VR-Ls)lsilsiB072
Lsi03G002750Cucumber (Gy14) v1cgylsiB204
Lsi03G002750Cucurbita maxima (Rimu)cmalsiB610
Lsi03G002750Cucurbita maxima (Rimu)cmalsiB656
Lsi03G002750Cucurbita maxima (Rimu)cmalsiB752
Lsi03G002750Cucurbita moschata (Rifu)cmolsiB598
Lsi03G002750Cucurbita moschata (Rifu)cmolsiB645
Lsi03G002750Cucurbita pepo (Zucchini)cpelsiB064
Lsi03G002750Cucurbita pepo (Zucchini)cpelsiB339
Lsi03G002750Wild cucumber (PI 183967)cpilsiB280
Lsi03G002750Cucumber (Chinese Long) v2culsiB282
Lsi03G002750Melon (DHL92) v3.5.1lsimeB276
Lsi03G002750Watermelon (Charleston Gray)lsiwcgB225
Lsi03G002750Watermelon (Charleston Gray)lsiwcgB240
Lsi03G002750Watermelon (97103) v1lsiwmB266
Lsi03G002750Cucumber (Gy14) v2cgyblsiB262
Lsi03G002750Melon (DHL92) v3.6.1lsimedB289
Lsi03G002750Silver-seed gourdcarlsiB017
Lsi03G002750Silver-seed gourdcarlsiB572
Lsi03G002750Cucumber (Chinese Long) v3cuclsiB303
Lsi03G002750Watermelon (97103) v2lsiwmbB221
Lsi03G002750Watermelon (97103) v2lsiwmbB234