MELO3C019995 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019995
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	LOB domain-containing protein, putative
Location	chr3 : 19797797 .. 19798985 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAAGAAATAATAATAGTAATAATTTGATTTTGAGCAGCAGTAGTAGTAGTCAAAGTAGTGGGATCAGTAATTTGAATACAATAACACCATGTGCAGCTTGTAAGCTTCTAAGAAGAAGATGTGCTCAAGAATGTCCATTTTCTCCTTATTTTTCTCCTCATGAACCACACAAATTTGCTTCTGTTCATAAGGTTTTTGGTGCTAGCAACGTTGCTAAGATGCTAATGGTAAAAACCCTAATCTCAATTTTTTTTCAGTTCTCTCTCTCTCTCTCTCTCTTTCTTTTTTTTTAATTTTAATATCTCAATAACTGTCCTTTTGAATCTCATGTTGATTATCAAATTCTGCTAGTTGTATACATAGATCTAGTGATAGGTATATTAAATTAATAAAAAGTATAGATCTAACTTTTTAATTGTCATTTATTTATATAATTTTAAACTTACAATTACATATATGTATGGTAGATCTAGTAATACTGTAGTTTTGTCTAGATAATAATTTAGGTACTTTTATTTTGAAAAGTTTATAATACACTTTGGTTGTTTCTAATTTTAAGTTTGTGTTTCATTTATTCAAAATATCTGATGTAGCATTAAAACCAGATGGAAAATTAAAAGTTAAGTCTCAGTTAGTTTGATATTTAGGTTTTAAGTTCCATCCTTTGTTGTATTAAATAAAAAAAAAAAAAATCGTATATTGATGAGTAAATAACAAAGTCATGAGAATATATATGAATATATGTAGGAAGTACCGGAGAATCAAAGAGCGGATGCAGCAAACAGCCTTGTTTATGAAGCAAATCTAAGGCTAAGAGATCCTGTTTACGGTTGCATGGGAGCCATTTCTGCTCTTCAACACCAACTTCATACTTTACAATCTGACCTCAATGCCATTACTACTCAAATTTTCAAATACAAATTTACTCATCACCCCATCAATATCCCTTCTTCTCCTAATTTCATCTCCCCCTCCCCCGCTGCTACCCCGCCTGCTGCCCCGCCAACTCCGCCTCATTCTCAGCCGCCTCCGCTCTCTCTTCCACCGCCTCTTCCTCCTTCCTCCTCCTCCTCCTCCGTCTTTTCCCCTCCCATTATTACAACAGCCACTTCTACCACCGTCGTTGAATTAATTAACCCTATTGTGTCAACAAGTACTCAACATATCTCCTACTTTGGTTAA

mRNA sequence

ATGGGAAGAAGAAATAATAATAGTAATAATTTGATTTTGAGCAGCAGTAGTAGTAGTCAAAGTAGTGGGATCAGTAATTTGAATACAATAACACCATGTGCAGCTTGTAAGCTTCTAAGAAGAAGATGTGCTCAAGAATGTCCATTTTCTCCTTATTTTTCTCCTCATGAACCACACAAATTTGCTTCTGTTCATAAGGTTTTTGGTGCTAGCAACGTTGCTAAGATGCTAATGGAAGTACCGGAGAATCAAAGAGCGGATGCAGCAAACAGCCTTGTTTATGAAGCAAATCTAAGGCTAAGAGATCCTGTTTACGGTTGCATGGGAGCCATTTCTGCTCTTCAACACCAACTTCATACTTTACAATCTGACCTCAATGCCATTACTACTCAAATTTTCAAATACAAATTTACTCATCACCCCATCAATATCCCTTCTTCTCCTAATTTCATCTCCCCCTCCCCCGCTGCTACCCCGCCTGCTGCCCCGCCAACTCCGCCTCATTCTCAGCCGCCTCCGCTCTCTCTTCCACCGCCTCTTCCTCCTTCCTCCTCCTCCTCCTCCGTCTTTTCCCCTCCCATTATTACAACAGCCACTTCTACCACCGTCGTTGAATTAATTAACCCTATTGTGTCAACAAGTACTCAACATATCTCCTACTTTGGTTAA

Coding sequence (CDS)

ATGGGAAGAAGAAATAATAATAGTAATAATTTGATTTTGAGCAGCAGTAGTAGTAGTCAAAGTAGTGGGATCAGTAATTTGAATACAATAACACCATGTGCAGCTTGTAAGCTTCTAAGAAGAAGATGTGCTCAAGAATGTCCATTTTCTCCTTATTTTTCTCCTCATGAACCACACAAATTTGCTTCTGTTCATAAGGTTTTTGGTGCTAGCAACGTTGCTAAGATGCTAATGGAAGTACCGGAGAATCAAAGAGCGGATGCAGCAAACAGCCTTGTTTATGAAGCAAATCTAAGGCTAAGAGATCCTGTTTACGGTTGCATGGGAGCCATTTCTGCTCTTCAACACCAACTTCATACTTTACAATCTGACCTCAATGCCATTACTACTCAAATTTTCAAATACAAATTTACTCATCACCCCATCAATATCCCTTCTTCTCCTAATTTCATCTCCCCCTCCCCCGCTGCTACCCCGCCTGCTGCCCCGCCAACTCCGCCTCATTCTCAGCCGCCTCCGCTCTCTCTTCCACCGCCTCTTCCTCCTTCCTCCTCCTCCTCCTCCGTCTTTTCCCCTCCCATTATTACAACAGCCACTTCTACCACCGTCGTTGAATTAATTAACCCTATTGTGTCAACAAGTACTCAACATATCTCCTACTTTGGTTAA

Protein sequence

MGRRNNNSNNLILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSSPNFISPSPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTVVELINPIVSTSTQHISYFG*

Homology

[Close]

BLAST of MELO3C019995 vs. Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-55
Identity = 106/191 (55.50%), Postives = 133/191 (69.63%), Query Frame = 1


Query: 25  SNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQ 84
           + LNT+TPCAACKLLRRRCA+ECPFSPYFSPHEPHKFA+VHKVFGASNV+KML+EV E+Q
Sbjct: 45  TTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQ 104

Query: 85  RADAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINI 144
           R DAANSLVYEANLRLRDP+YGCMGAISALQH + +LQS+L  + T+I ++K+       
Sbjct: 105 RGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTIT 164

Query: 145 PSSPNFISPSPAATP-------------PAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFS 203
               NF S +  ++              P  PP PP  +PP L    P PP +   S+ S
Sbjct: 165 SLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPS 224

[Close]

BLAST of MELO3C019995 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 3.0e-55
Identity = 116/175 (66.29%), Postives = 127/175 (72.57%), Query Frame = 1


Query: 27  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRA 86
           LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNV+KMLMEVPE+QRA
Sbjct: 40  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRA 99

Query: 87  DAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTH--HPINI 146
           DAANSLVYEAN+RLRDPVYGCMGAISALQ Q+  LQ++L A+ ++I KYK       + +
Sbjct: 100 DAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIV 159

Query: 147 PSSP------NFISPSPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPP 194
           PS+       N    S  A PP  P TPP     P +  PP P    SS VFS P
Sbjct: 160 PSNSQVAGFHNSGGVSVIAPPPQRPTTPPQ----PTTAHPPSP----SSCVFSQP 206

[Close]

BLAST of MELO3C019995 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 70/111 (63.06%), Postives = 85/111 (76.58%), Query Frame = 1


Query: 31  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAAN 90
           +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNV+KML E+P +QRADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 91  SLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHP 142
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ  L     +I   +  + P
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEP 117

[Close]

BLAST of MELO3C019995 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-35
Identity = 68/113 (60.18%), Postives = 86/113 (76.11%), Query Frame = 1


Query: 24  ISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPEN 83
           +++ +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  +
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 84  QRADAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYK 137
           QR DA NSL YEA++RLRDPVYGC+G IS LQHQL  LQ DL+   +++ KY+
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

[Close]

BLAST of MELO3C019995 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.7e-35
Identity = 74/143 (51.75%), Postives = 92/143 (64.34%), Query Frame = 1


Query: 31  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAAN 90
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV KML E+P +QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 91  SLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSSPNF 150
           S+VYEAN R+RDPVYGC+GAIS+LQ Q+  LQ+ L     ++         + +  S NF
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVH-------LRVRQSTNF 131

Query: 151 ISPSPAATPPAAPPTPPHSQPPP 174
                    P++  +P   Q  P
Sbjct: 132 PGHGLCPDSPSSSGSPSSKQVSP 147

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BLAST of MELO3C019995 vs. TrEMBL
Match: A0A0A0K8P6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013950 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 4.9e-121
Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 1


Query: 1   MGRRNNNSNN-LILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 60
           MGRRNNN+NN LILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH
Sbjct: 33  MGRRNNNNNNNLILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 92

Query: 61  KFASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLH 120
           KFASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLH
Sbjct: 93  KFASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLH 152

Query: 121 TLQSDLNAITTQIFKYKFTHHPINIPSSPNFISPSPAATPPAAPPTPPHSQPPPLSLPPP 180
           TLQSDLNAITTQIFKYKFTHHPINIPSSPNF++PSPAATPP APPTPPHSQPPPLSLPPP
Sbjct: 153 TLQSDLNAITTQIFKYKFTHHPINIPSSPNFMAPSPAATPPVAPPTPPHSQPPPLSLPPP 212

Query: 181 LPPSSSSSSVFSPPIITTATSTTVVELINPIVSTSTQHISYFG 223
           LPPSSSSSSVFSPPIITTATSTTVVELINPIV TSTQHISYFG
Sbjct: 213 LPPSSSSSSVFSPPIITTATSTTVVELINPIVPTSTQHISYFG 255

[Close]

BLAST of MELO3C019995 vs. TrEMBL
Match: A0A103YJ53_CYNCS (Lateral organ boundaries domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_011608 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.6e-63
Identity = 131/209 (62.68%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 27  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRA 86
           LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KFASVHKVFGASNV+K+LMEVPENQRA
Sbjct: 8   LNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKLLMEVPENQRA 67

Query: 87  DAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFT------HH 146
           DAANSLVYEAN+RLRDPVYGCMGAIS+LQHQ+ +LQS+LNA+  +I +YK++      HH
Sbjct: 68  DAANSLVYEANVRLRDPVYGCMGAISSLQHQVQSLQSELNAVRAEILRYKYSETTHHDHH 127

Query: 147 PINIPSSPN---FISPSPAATPPAAPP----TPPHSQPPPLSLPPPLPPSSSSSSVFSPP 206
              IPS+ +   F + + + TPP  PP     PP   PPP   PPP PP+SSSSS+++PP
Sbjct: 128 HHIIPSTHHLALFSTGAVSVTPP--PPQQQRPPPSPLPPPPPPPPPPPPASSSSSMYTPP 187

Query: 207 IITTATSTTVVELINPIVSTSTQHISYFG 223
             TT  ST            +  ++SYFG
Sbjct: 188 STTTDYST-----------ITNDNVSYFG 203

[Close]

BLAST of MELO3C019995 vs. TrEMBL
Match: A0A059BI15_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03121 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.0e-62
Identity = 127/196 (64.80%), Postives = 147/196 (75.00%), Query Frame = 1


Query: 27  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRA 86
           LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPE+QRA
Sbjct: 40  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRA 99

Query: 87  DAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPS 146
           DAANSLVYEAN+RLRDPVYGCMGAISALQ Q+ +LQ++LNA+ ++I KYK+    I  P+
Sbjct: 100 DAANSLVYEANVRLRDPVYGCMGAISALQQQIQSLQAELNAVRSEILKYKYREAGIISPT 159

Query: 147 SPNFISPSPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTVVEL 206
           S +    SP     AAPP  P  Q  P SLPPPLPP+SS  S+F+ P  TT         
Sbjct: 160 S-HVTLLSPGTVSIAAPPPTPPPQSAPTSLPPPLPPASSPPSLFTQPGGTTDYG------ 219

Query: 207 INPIVSTSTQHISYFG 223
                  S++++SYFG
Sbjct: 220 -----GISSENVSYFG 223

[Close]

BLAST of MELO3C019995 vs. TrEMBL
Match: B9S4B8_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.5e-61
Identity = 129/204 (63.24%), Postives = 153/204 (75.00%), Query Frame = 1


Query: 27  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRA 86
           LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPE+QRA
Sbjct: 37  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRA 96

Query: 87  DAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKF--------T 146
           DAANSLVYEAN+RLRDPVYGCMGAISALQ Q+ TLQ++LNA+  +I KYK+        T
Sbjct: 97  DAANSLVYEANVRLRDPVYGCMGAISALQQQIQTLQAELNAVRAEILKYKYREANILPST 156

Query: 147 HHPINIPSSPNFISPSPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTA 206
           H  +    + +  + S + TPP  PPTPP   PPP   PPPLPP+SSS+S++      T 
Sbjct: 157 HVALLSSGAVSVAATSQSLTPP--PPTPP--PPPP---PPPLPPTSSSTSLY------TH 216

Query: 207 TSTTVVELINPIVSTSTQHISYFG 223
             TTV +      S S++++S+FG
Sbjct: 217 QPTTVAD----YSSISSENVSFFG 223

[Close]

BLAST of MELO3C019995 vs. TrEMBL
Match: A0A067JNV9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03351 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.5e-61
Identity = 129/203 (63.55%), Postives = 148/203 (72.91%), Query Frame = 1


Query: 27  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRA 86
           LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPE+QRA
Sbjct: 37  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRA 96

Query: 87  DAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPS 146
           DAANSLVYEAN+RLRDPVYGCMGAISALQ Q+ +LQ++LNAI  +I KYK+    I IPS
Sbjct: 97  DAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAIRAEILKYKYREANI-IPS 156

Query: 147 SPNFI------SPSPAATPPAAPPTPPHSQPPPLSLPPPLPP-SSSSSSVFSPPIITTAT 206
           S   I      + S     P+  P  P   PPP   PPPLPP SSSSSS+++    + A 
Sbjct: 157 SHQHIALLSSGAVSVVTQSPSLTPQQPPQPPPPPPPPPPLPPTSSSSSSIYTHQPTSAAD 216

Query: 207 STTVVELINPIVSTSTQHISYFG 223
            TT+          S +H+S+FG
Sbjct: 217 YTTI----------SNEHVSFFG 228

[Close]

BLAST of MELO3C019995 vs. TAIR10
Match: AT2G30340.1 (AT2G30340.1 LOB domain-containing protein 13)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-56
Identity = 106/191 (55.50%), Postives = 133/191 (69.63%), Query Frame = 1


Query: 25  SNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQ 84
           + LNT+TPCAACKLLRRRCA+ECPFSPYFSPHEPHKFA+VHKVFGASNV+KML+EV E+Q
Sbjct: 45  TTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQ 104

Query: 85  RADAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINI 144
           R DAANSLVYEANLRLRDP+YGCMGAISALQH + +LQS+L  + T+I ++K+       
Sbjct: 105 RGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTIT 164

Query: 145 PSSPNFISPSPAATP-------------PAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFS 203
               NF S +  ++              P  PP PP  +PP L    P PP +   S+ S
Sbjct: 165 SLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPS 224

[Close]

BLAST of MELO3C019995 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-56
Identity = 116/175 (66.29%), Postives = 127/175 (72.57%), Query Frame = 1


Query: 27  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRA 86
           LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNV+KMLMEVPE+QRA
Sbjct: 40  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRA 99

Query: 87  DAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTH--HPINI 146
           DAANSLVYEAN+RLRDPVYGCMGAISALQ Q+  LQ++L A+ ++I KYK       + +
Sbjct: 100 DAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIV 159

Query: 147 PSSP------NFISPSPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPP 194
           PS+       N    S  A PP  P TPP     P +  PP P    SS VFS P
Sbjct: 160 PSNSQVAGFHNSGGVSVIAPPPQRPTTPPQ----PTTAHPPSP----SSCVFSQP 206

[Close]

BLAST of MELO3C019995 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 70/111 (63.06%), Postives = 85/111 (76.58%), Query Frame = 1


Query: 31  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAAN 90
           +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNV+KML E+P +QRADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 91  SLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHP 142
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ  L     +I   +  + P
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEP 117

[Close]

BLAST of MELO3C019995 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 149.1 bits (375), Expect = 3.3e-36
Identity = 68/113 (60.18%), Postives = 86/113 (76.11%), Query Frame = 1


Query: 24  ISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPEN 83
           +++ +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  +
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 84  QRADAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYK 137
           QR DA NSL YEA++RLRDPVYGC+G IS LQHQL  LQ DL+   +++ KY+
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

[Close]

BLAST of MELO3C019995 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 148.7 bits (374), Expect = 4.4e-36
Identity = 74/143 (51.75%), Postives = 92/143 (64.34%), Query Frame = 1


Query: 31  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAAN 90
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV KML E+P +QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 91  SLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSSPNF 150
           S+VYEAN R+RDPVYGC+GAIS+LQ Q+  LQ+ L     ++         + +  S NF
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVH-------LRVRQSTNF 131

Query: 151 ISPSPAATPPAAPPTPPHSQPPP 174
                    P++  +P   Q  P
Sbjct: 132 PGHGLCPDSPSSSGSPSSKQVSP 147

[Close]

BLAST of MELO3C019995 vs. NCBI nr
Match: gi|659113801|ref|XP_008456762.1| (PREDICTED: LOB domain-containing protein 15-like [Cucumis melo])

HSP 1 Score: 453.4 bits (1165), Expect = 2.3e-124
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


Query: 1   MGRRNNNSNNLILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 60
           MGRRNNNSNNLILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK
Sbjct: 33  MGRRNNNSNNLILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 92

Query: 61  FASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLHT 120
           FASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLHT
Sbjct: 93  FASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLHT 152

Query: 121 LQSDLNAITTQIFKYKFTHHPINIPSSPNFISPSPAATPPAAPPTPPHSQPPPLSLPPPL 180
           LQSDLNAITTQIFKYKFTHHPINIPSSPNFISPSPAATPPAAPPTPPHSQPPPLSLPPPL
Sbjct: 153 LQSDLNAITTQIFKYKFTHHPINIPSSPNFISPSPAATPPAAPPTPPHSQPPPLSLPPPL 212

Query: 181 PPSSSSSSVFSPPIITTATSTTVVELINPIVSTSTQHISYFG 223
           PPSSSSSSVFSPPIITTATSTTVVELINPIVSTSTQHISYFG
Sbjct: 213 PPSSSSSSVFSPPIITTATSTTVVELINPIVSTSTQHISYFG 254

[Close]

BLAST of MELO3C019995 vs. NCBI nr
Match: gi|449441568|ref|XP_004138554.1| (PREDICTED: LOB domain-containing protein 15 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 7.1e-121
Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 1


Query: 1   MGRRNNNSNN-LILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 60
           MGRRNNN+NN LILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH
Sbjct: 33  MGRRNNNNNNNLILSSSSSSQSSGISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 92

Query: 61  KFASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLH 120
           KFASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLH
Sbjct: 93  KFASVHKVFGASNVAKMLMEVPENQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLH 152

Query: 121 TLQSDLNAITTQIFKYKFTHHPINIPSSPNFISPSPAATPPAAPPTPPHSQPPPLSLPPP 180
           TLQSDLNAITTQIFKYKFTHHPINIPSSPNF++PSPAATPP APPTPPHSQPPPLSLPPP
Sbjct: 153 TLQSDLNAITTQIFKYKFTHHPINIPSSPNFMAPSPAATPPVAPPTPPHSQPPPLSLPPP 212

Query: 181 LPPSSSSSSVFSPPIITTATSTTVVELINPIVSTSTQHISYFG 223
           LPPSSSSSSVFSPPIITTATSTTVVELINPIV TSTQHISYFG
Sbjct: 213 LPPSSSSSSVFSPPIITTATSTTVVELINPIVPTSTQHISYFG 255

[Close]

BLAST of MELO3C019995 vs. NCBI nr
Match: gi|720003292|ref|XP_010256944.1| (PREDICTED: LOB domain-containing protein 15 [Nelumbo nucifera])

HSP 1 Score: 253.1 bits (645), Expect = 4.6e-64
Identity = 133/203 (65.52%), Postives = 155/203 (76.35%), Query Frame = 1


Query: 26  NLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQR 85
           +LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KFASVHKVFGASNV+KMLMEVPE+QR
Sbjct: 37  SLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQR 96

Query: 86  ADAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPIN-I 145
           ADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+ +LQ++LNA+  +I KYK+     + I
Sbjct: 97  ADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKYRETSASII 156

Query: 146 PSSP-----NFISPSPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTAT 205
           PSS      +  + S AA PP   PTP HSQPPP   PPPLP SSSSSS+++PP  +T  
Sbjct: 157 PSSHAAALLSSGAVSVAAPPPVVAPTPSHSQPPP-PPPPPLPASSSSSSMYTPPSSSTDY 216

Query: 206 STTVVELINPIVSTSTQHISYFG 223
           S           S + +++SYFG
Sbjct: 217 S-----------SITNENVSYFG 227

[Close]

BLAST of MELO3C019995 vs. NCBI nr
Match: gi|661882352|emb|CDP13932.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 250.4 bits (638), Expect = 3.0e-63
Identity = 131/208 (62.98%), Postives = 158/208 (75.96%), Query Frame = 1


Query: 23  GISNLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPE 82
           G   LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KFASVH+VFGASNV+KMLMEVPE
Sbjct: 36  GGGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHRVFGASNVSKMLMEVPE 95

Query: 83  NQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKF---TH 142
           +QRADAANSLVYEAN+RLRDPVYGCMGAIS LQ Q+ +LQ++LNA+  +I +Y+F   ++
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISTLQQQVQSLQAELNAVRAEILQYRFRETSN 155

Query: 143 HPINIPSSPNF-ISPSPAATPPAAPPTPPHSQPPP---LSLPPP-LPPSSSSSSVFSPPI 202
             I++PS+PN  +  S A +  A PPTPPH  PPP   L  PPP LP +S SSS++SPP 
Sbjct: 156 INIHVPSNPNLALLSSGAVSIAALPPTPPHPPPPPPPHLPPPPPSLPHTSPSSSMYSPPS 215

Query: 203 ITTATSTTVVELINPIVSTSTQHISYFG 223
            T A  +T+          S ++IS+FG
Sbjct: 216 STAADFSTI----------SNENISFFG 233

[Close]

BLAST of MELO3C019995 vs. NCBI nr
Match: gi|976926142|gb|KVI10015.1| (lateral organ boundaries domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 249.6 bits (636), Expect = 5.1e-63
Identity = 131/209 (62.68%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 27  LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRA 86
           LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KFASVHKVFGASNV+K+LMEVPENQRA
Sbjct: 8   LNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKLLMEVPENQRA 67

Query: 87  DAANSLVYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFT------HH 146
           DAANSLVYEAN+RLRDPVYGCMGAIS+LQHQ+ +LQS+LNA+  +I +YK++      HH
Sbjct: 68  DAANSLVYEANVRLRDPVYGCMGAISSLQHQVQSLQSELNAVRAEILRYKYSETTHHDHH 127

Query: 147 PINIPSSPN---FISPSPAATPPAAPP----TPPHSQPPPLSLPPPLPPSSSSSSVFSPP 206
              IPS+ +   F + + + TPP  PP     PP   PPP   PPP PP+SSSSS+++PP
Sbjct: 128 HHIIPSTHHLALFSTGAVSVTPP--PPQQQRPPPSPLPPPPPPPPPPPPASSSSSMYTPP 187

Query: 207 IITTATSTTVVELINPIVSTSTQHISYFG 223
             TT  ST            +  ++SYFG
Sbjct: 188 STTTDYST-----------ITNDNVSYFG 203

The following BLAST results are available for this feature:

BLAST of MELO3C019995 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LBD13_ARATH	1.8e-55	55.50	LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2	[more]
LBD15_ARATH	3.0e-55	66.29	LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2	[more]
LBD12_ARATH	2.0e-35	63.06	LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2	[more]
LBD6_ARATH	5.9e-35	60.18	LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1	[more]
LBD4_ARATH	7.7e-35	51.75	LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1	[more]

BLAST of MELO3C019995 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8P6_CUCSA	4.9e-121	97.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013950 PE=4 SV=1	[more]
A0A103YJ53_CYNCS	3.6e-63	62.68	Lateral organ boundaries domain-containing protein OS=Cynara cardunculus var. sc...	[more]
A0A059BI15_EUCGR	4.0e-62	64.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03121 PE=4 SV=1	[more]
B9S4B8_RICCO	7.5e-61	63.24	LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4...	[more]
A0A067JNV9_JATCU	7.5e-61	63.55	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03351 PE=4 SV=1	[more]

BLAST of MELO3C019995 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30340.1	1.0e-56	55.50	LOB domain-containing protein 13	[more]
AT2G40470.1	1.7e-56	66.29	LOB domain-containing protein 15	[more]
AT2G30130.1	1.1e-36	63.06	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.1	3.3e-36	60.18	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	4.4e-36	51.75	LOB domain-containing protein 4	[more]

BLAST of MELO3C019995 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113801\|ref\|XP_008456762.1\|	2.3e-124	100.00	PREDICTED: LOB domain-containing protein 15-like [Cucumis melo]	[more]
gi\|449441568\|ref\|XP_004138554.1\|	7.1e-121	97.31	PREDICTED: LOB domain-containing protein 15 [Cucumis sativus]	[more]
gi\|720003292\|ref\|XP_010256944.1\|	4.6e-64	65.52	PREDICTED: LOB domain-containing protein 15 [Nelumbo nucifera]	[more]
gi\|661882352\|emb\|CDP13932.1\|	3.0e-63	62.98	unnamed protein product [Coffea canephora]	[more]
gi\|976926142\|gb\|KVI10015.1\|	5.1e-63	62.68	lateral organ boundaries domain-containing protein [Cynara cardunculus var. scol...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005951	carbamoyl-phosphate synthase complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019995T1	MELO3C019995T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	DUF260	coord: 32..128 score: 3.5
IPR004883	Lateral organ boundaries, LOB	PROFILE	PS50891	LOB	coord: 31..132 score: 25
None	No IPR available	unknown	Coil	Coil	coord: 111..131 scor
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 12..190 score: 2.0
None	No IPR available	PANTHER	PTHR31301:SF2	LOB DOMAIN-CONTAINING PROTEIN 15	coord: 12..190 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019995	Csa6G013950	Cucumber (Chinese Long) v2	cumeB478
MELO3C019995	ClCG11G005800	Watermelon (Charleston Gray)	mewcgB268
MELO3C019995	Cla97C11G212720	Watermelon (97103) v2	mewmbB280
MELO3C019995	Bhi04G001849	Wax gourd	mewgoB331
MELO3C019995	CSPI06G02030	Wild cucumber (PI 183967)	cpimeB476
MELO3C019995	Cucsa.326100	Cucumber (Gy14) v1	cgymeB536
MELO3C019995	CmaCh15G001570	Cucurbita maxima (Rimu)	cmameB272
MELO3C019995	CmoCh15G001700	Cucurbita moschata (Rifu)	cmomeB263
MELO3C019995	Lsi03G002750	Bottle gourd (USVL1VR-Ls)	lsimeB256
MELO3C019995	Cp4.1LG13g07450	Cucurbita pepo (Zucchini)	cpemeB165
MELO3C019995	CsGy6G002110	Cucumber (Gy14) v2	cgybmeB418
MELO3C019995	Carg02149	Silver-seed gourd	carmeB0269
MELO3C019995	CsaV3_6G002180	Cucumber (Chinese Long) v3	cucmeB487

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019995	Silver-seed gourd	carmeB0021
MELO3C019995	Watermelon (97103) v2	mewmbB289
MELO3C019995	Wax gourd	mewgoB359
MELO3C019995	Melon (DHL92) v3.5.1	memeB133
MELO3C019995	Cucurbita maxima (Rimu)	cmameB676
MELO3C019995	Cucurbita moschata (Rifu)	cmomeB586
MELO3C019995	Cucurbita moschata (Rifu)	cmomeB668
MELO3C019995	Wild cucumber (PI 183967)	cpimeB285
MELO3C019995	Watermelon (Charleston Gray)	mewcgB284
MELO3C019995	Cucurbita pepo (Zucchini)	cpemeB397
MELO3C019995	Bottle gourd (USVL1VR-Ls)	lsimeB138
MELO3C019995	Cucumber (Gy14) v2	cgybmeB247