Cp4.1LG13g07450 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g07450
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain-containing protein, putative
LocationCp4.1LG13 : 8546645 .. 8550134 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGGTAGGTGTTCAGAATGCACATGATTGGAATTTATAATTAAAACCCAACAAAATTGAGAAGGAAAGAGTGTATTTATGGAAGCATCTAGGGTTTGGTATGAGGAGAGAGAAAGTTAGGTTTGGGGAATGAGGAGAGAGAAGAAGGTGGCGAATTGTGAGGCTGAAAAAAGGGGTCAAACAAGGAGGGATGGTGCTATGTTTGCTTGCAGTCTAAGGATACCATTTTATTTTATTCACACTCTTCTCTCCTAAGTCCTAATATGCATTTAGTATCAATAGTTTATGTAAGCTTTCCTCTTTCCCTCACTTTCACCACCCACTTTGACACAACCCTCCTCAAATTCACACACCCAACTAAATCAATCTCTTCCAATTCAAAGTTTAGCTATTCGAACCGATTAAGCGTACTGCTAGTAGATATTGTTGGCTTTGGCTTGATATGTATCGTTGTCAGCCTCAGTTTTAAAACGCGTCGGTTAGAAAGAGGTTTCTACTCTATTATAAGGAATGCTTCATTATCCTCTCCAACCGATATGAAATCCCATAATCCACTCCTTTGGTGCCTAATGTCATCGCTGGCACACTGCTTGATGACTGGCTCTGATACTATTTGTAACGTCCAAGCTCACTGCTAGAAGATACTGTATGTTTTGGCCCAATACGTATCATCGTCATTCTCATAGTTTTAAAACGCGTCTATTAAGGAGAGTCTTCAATACCCTTATAAGTAAAGTAATGTTTCATGAAATCTCATAATCCACTCCCTTGGGGGCCCAACGTCCTCGCTGGTACACTGCTCGATGTCTAGCTGTGTAACGACCCAAGCCCAAGCCCACCGCTAATAGATATTGTCCTCTTTTTGCACCATTCTAAAGGGGGTTTTGTTCTCCTCCTCAACCAATGTGGGACATCACAGGTTCTGATACCATTTGTAACCGTCCAAGCCCACTGGTAGCATATATTGTTCACTTTTGCCTAATACGTATCGTTTTCAGCCTCACAGTTTTAAAACACATCCGTTAGAGAGAAGTTTCTATAATTTTGTAAAGAATATTTCGTTCTCCTCTTCAATCCAACCAATGTAGGATCTGACACGTATCCATTACGAAGCAAAAGGGTGTTGAGTCATTTTCTGAGTGAGAAATGTTGAGTGTTTTAGTGAACGATGTGTTGTGGATAGTCACCAACAATCACAGCTACATCACTTACATTATTATTATCAAAACCTTGAAGGCAACCCATTTGTTGTAGGATTCTGATTTTGACATGAAACTACTACCAACCTAATTTCTACTCGGTTCGAAACCTTTCAAACTTGGATACAATTTACATTGTTTATACCATAAATCATCATTATAATTATACATATACATTGACATGTTTCCCAGCTATTATCTTCCAGAAACAAATCAAAAATAATGTTCACATGGATCCAAAGTCAAAATGCATTTAAGAACCCACACGTGAGGCTGCAGTCCTATCATATTTATAACTCACCCCCTCTTCTTCTTCTCCTTCTTCTCCTCAGCTAATTCTCTTTCCTTCCTTTTAAGCAAACCCTTGTTCTTGTTCTTGTTCTTCGATTCGGGTTCGATTCGGGTATGCCTGAATGTCAAGAGAAAGGTGAGTAAGTATGAAAATGATATGCCTAAATGCTTGTTTTTGTTAATGATTTGGGGTTTGTTTTGGCAGAGAATTGCAGGAGGTTGATGAGATAAAGAGGGAGGTGGTTGAAGGGTTTTATCCATTAATGGGAAGAAGGCAGATATTGAGTCAAGCTGGGGCGTTGAATACCATAACGCCATGTGCGGCCTGTAAGCTATTAAGAAGAAGGTGCGCTCAAGAATGCCCATTTTCTCCATATTTCTCTCCCCATGAACCCCACAAGTTTGCTTCGGTCCATAAGGTTTTTGGTGCCAGCAACGTGGCTAAGATGCTCATGGTAAGCATCAACCCTCACTCTTCATTTTTCTTGTTCAAAGGGATGTGCTTAGATCCATTGAGGCCTATATTAAATTAATAAAAATAGATCTCGGTTTTCAATTTCATATTAATTATATTTTTGTCTACCTAATATTATAAAATACATAAACACATATGGTACATCTCTAATTTTGTCTACCTAAGTTTACTACTATATTTTATAAATTTTTTAATCAACCCTCAATTATTGTATCTATTATTACCTTAGCTCAAATTAGAGATGTCCACTCCGCCGAGGAAGTGGACAGGGGCGGGGTGGGGGAAGCCTTCTCCGTCCCTATCCCAGTCACCTATTGTAACGACCCAGGCCTACCGCTAGCAAATATTGTCCTCTTTGGGCTTCTTCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTACGGGAAGGTTTCCACACCCTTGTAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTAGGACATCACAATCCACCCCCTTCTGGGCCCCAGTGTCCTCGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGATCCCCCCCAAATCCACCCCCTTTGAGGCCAGCGTCCTTACTAGCACACCGTCTCGTGTCTACCCCCTTTCGGGGAACAGCGAGAAGACTGACACAGCGTTTTAAAGCCATGAGAGGAAGCCCGAAATGGAGGTTTCCCCTAGAGGACAATATCTACTAGCGGTGGGCCTAGGTCGTTACACCAATTTCATTTTCTATTCCCGCAAAATTTCTCAATTATTTTTGCGGGGACTGAGTCGGAGATTCCCCACGAAGAATTTGTTGGGAATGGAATTCCCTCTTAAGTCATTTATTATTCTTTTTAAAAATATATAATTATTTTAAAATTTTTATTCAAATAAATTAGGAAAGAATCCTAATAAATAGATATATTTGATAAGCAAACGCATGTATTTATATGACAATTAGGGTTTCAAAATTAACTAATATAACCGAAAATGTATTTATATGAGGTGGGTCGGTGAATTGAGCATAGATCGGGACAAAAAATATAATCTTGTCTGCACGGTTCGAATTTGATGTTGAATTTGTGAAAATTTGTAGGAAGTGCCGGAGAGTCAAAGAGCGGACGCCGCAAACAGCCTAGTGTATGAAGCCAATCTGAGGCTGAGGGATCCAGTGTACGGCTGCATGGGCGCCATTTCTGCTCTCCAACACCAACTTCAAACCTTACAAGCTGACCTCAACGCTATAAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATCATCCCTTCTCCTTCCTCCTCTTCCTCTTCCCACATCGCTTTCATTTCCGCTACCGGGCTCGTATCCACCACCGCAACCCCGCCTACTGCCCCGCCAACTCCGCCGCCTTCTCAGCCACCTCCGCTCTCTCTTCCCCCGCCTCTTCCTCCCTCCTCCTCCTCCTCCTCCATCTTTTCTCCGCCCATCAGCACCACCACTGCCCCTCAACTAATTAACCCTATCTCAACCCAACATATTCCTTACTTTGGTTGA

mRNA sequence

ATGGACGGAGAATTGCAGGAGGTTGATGAGATAAAGAGGGAGGTGGTTGAAGGGTTTTATCCATTAATGGGAAGAAGGCAGATATTGAGTCAAGCTGGGGCGTTGAATACCATAACGCCATGTGCGGCCTGTAAGCTATTAAGAAGAAGGTGCGCTCAAGAATGCCCATTTTCTCCATATTTCTCTCCCCATGAACCCCACAAGTTTGCTTCGGTCCATAAGGTTTTTGGTGCCAGCAACGTGGCTAAGATGCTCATGGAAGTGCCGGAGAGTCAAAGAGCGGACGCCGCAAACAGCCTAGTGTATGAAGCCAATCTGAGGCTGAGGGATCCAGTGTACGGCTGCATGGGCGCCATTTCTGCTCTCCAACACCAACTTCAAACCTTACAAGCTGACCTCAACGCTATAAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATCATCCCTTCTCCTTCCTCCTCTTCCTCTTCCCACATCGCTTTCATTTCCGCTACCGGGCTCGTATCCACCACCGCAACCCCGCCTACTGCCCCGCCAACTCCGCCGCCTTCTCAGCCACCTCCGCTCTCTCTTCCCCCGCCTCTTCCTCCCTCCTCCTCCTCCTCCTCCATCTTTTCTCCGCCCATCAGCACCACCACTGCCCCTCAACTAATTAACCCTATCTCAACCCAACATATTCCTTACTTTGGTTGA

Coding sequence (CDS)

ATGGACGGAGAATTGCAGGAGGTTGATGAGATAAAGAGGGAGGTGGTTGAAGGGTTTTATCCATTAATGGGAAGAAGGCAGATATTGAGTCAAGCTGGGGCGTTGAATACCATAACGCCATGTGCGGCCTGTAAGCTATTAAGAAGAAGGTGCGCTCAAGAATGCCCATTTTCTCCATATTTCTCTCCCCATGAACCCCACAAGTTTGCTTCGGTCCATAAGGTTTTTGGTGCCAGCAACGTGGCTAAGATGCTCATGGAAGTGCCGGAGAGTCAAAGAGCGGACGCCGCAAACAGCCTAGTGTATGAAGCCAATCTGAGGCTGAGGGATCCAGTGTACGGCTGCATGGGCGCCATTTCTGCTCTCCAACACCAACTTCAAACCTTACAAGCTGACCTCAACGCTATAAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATCATCCCTTCTCCTTCCTCCTCTTCCTCTTCCCACATCGCTTTCATTTCCGCTACCGGGCTCGTATCCACCACCGCAACCCCGCCTACTGCCCCGCCAACTCCGCCGCCTTCTCAGCCACCTCCGCTCTCTCTTCCCCCGCCTCTTCCTCCCTCCTCCTCCTCCTCCTCCATCTTTTCTCCGCCCATCAGCACCACCACTGCCCCTCAACTAATTAACCCTATCTCAACCCAACATATTCCTTACTTTGGTTGA

Protein sequence

MDGELQEVDEIKREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG
Homology
[Close]
BLAST of Cp4.1LG13g07450 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 6.1e-59
Identity = 134/202 (66.34%), Postives = 151/202 (74.75%), Query Frame = 1 

Query: 10  EIKREVVEGFYPLMG-RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 69
           +IKRE     + + G RR +    G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK
Sbjct: 14  KIKREADAWPHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 73

Query: 70  FASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQT 129
           FASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q 
Sbjct: 74  FASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQA 133

Query: 130 LQADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQP 189
           LQA+L A+R+EILKYK REA + +    S+S +A    +G VS  A PP  P TP    P
Sbjct: 134 LQAELTAVRSEILKYKQREA-VATLIVPSNSQVAGFHNSGGVSVIAPPPQRPTTP----P 193

Query: 190 PPLSLPPPLPPSSSSSSIFSPP 211
            P +  PP P    SS +FS P
Sbjct: 194 QPTTAHPPSP----SSCVFSQP 206

[Close]
BLAST of Cp4.1LG13g07450 vs. Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-53
Identity = 124/222 (55.86%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 20  YPLMG-RRQILSQAG-ALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFG 79
           + +MG RR +    G  LNT+TPCAACKLLRRRCA+ECPFSPYFSPHEPHKFA+VHKVFG
Sbjct: 30  HAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFG 89

Query: 80  ASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIR 139
           ASNV+KML+EV ESQR DAANSLVYEANLRLRDP+YGCMGAISALQH +Q+LQ++L  +R
Sbjct: 90  ASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVR 149

Query: 140 TEILKYKYREAIIPSP-----SSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQPPPLS 199
           TEIL++KY+EA   +      +S++++         L S    PP  PP P P  P  LS
Sbjct: 150 TEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLS 209

Query: 200 ---LPPPLPP-----------------SSSSSSIFSPPISTT 215
               PPP PP                 SS+++S+++PP S+T
Sbjct: 210 SQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSST 251

[Close]
BLAST of Cp4.1LG13g07450 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.6e-36
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 1 

Query: 36  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 95
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 96  AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYK 145
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  ++E+ KY+
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

[Close]
BLAST of Cp4.1LG13g07450 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 39  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 98
           +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNV+KML E+P  QRADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 99  SLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEIL 142
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ  L   + EIL
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEIL 109

[Close]
BLAST of Cp4.1LG13g07450 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 77/128 (60.16%), Postives = 95/128 (74.22%), Query Frame = 1 

Query: 39  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 98
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV KML E+P  QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 99  SLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREA-------IIP 158
           S+VYEAN R+RDPVYGC+GAIS+LQ Q+  LQA L   + E++  + R++       + P
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

[Close]
BLAST of Cp4.1LG13g07450 vs. TrEMBL
Match: A0A0A0K8P6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013950 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.9e-77
Identity = 182/259 (70.27%), Postives = 194/259 (74.90%), Query Frame = 1 

Query: 4   ELQEVDEI----KREVVEG--FYP--LMGRRQ-------ILSQAGA--------LNTITP 63
           ELQEVDEI    KRE+     FY   LMGRR        ILS + +        LNTITP
Sbjct: 6   ELQEVDEIGKKIKREIESSNLFYDPNLMGRRNNNNNNNLILSSSSSSQSSGISNLNTITP 65

Query: 64  CAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSL 123
           CAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPE+QRADAANSL
Sbjct: 66  CAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAANSL 125

Query: 124 VYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSH 183
           VYEANLRLRDPVYGCMGAISALQHQL TLQ+DLNAI T+I KYK+    I  PSS +   
Sbjct: 126 VYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSSPN--- 185

Query: 184 IAFISATGLVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPIST----TTA 233
             F++     S  ATPP APPTPP SQPPPLSLPPPLPPSSSSSS+FSPPI T    TT 
Sbjct: 186 --FMAP----SPAATPPVAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTV 245

[Close]
BLAST of Cp4.1LG13g07450 vs. TrEMBL
Match: A0A059BI15_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03121 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.7e-69
Identity = 152/223 (68.16%), Postives = 173/223 (77.58%), Query Frame = 1 

Query: 10  EIKREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKF 69
           +IKR+     + LMGRR +L   G LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KF
Sbjct: 15  KIKRDGDASHHHLMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKF 74

Query: 70  ASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTL 129
           ASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q+L
Sbjct: 75  ASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQIQSL 134

Query: 130 QADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQPP 189
           QA+LNA+R+EILKYKYREA I SP+S    H+  +S  G VS  A PPT PP     Q  
Sbjct: 135 QAELNAVRSEILKYKYREAGIISPTS----HVTLLSP-GTVSIAAPPPTPPP-----QSA 194

Query: 190 PLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG 233
           P SLPPPLPP+SS  S+F+ P  TT        IS++++ YFG
Sbjct: 195 PTSLPPPLPPASSPPSLFTQPGGTTD----YGGISSENVSYFG 223

[Close]
BLAST of Cp4.1LG13g07450 vs. TrEMBL
Match: A0A067JNV9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03351 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66
Identity = 154/235 (65.53%), Postives = 172/235 (73.19%), Query Frame = 1 

Query: 1   MDGELQEVDEIKREVVE--GFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECPFS 60
           M  E +  DEI +++         MGRR +L   G LNTITPCAACKLLRRRCAQECPFS
Sbjct: 1   MSRERERFDEIGKKIKRETDASSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFS 60

Query: 61  PYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGA 120
           PYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGA
Sbjct: 61  PYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGA 120

Query: 121 ISALQHQLQTLQADLNAIRTEILKYKYREA-IIPSPSSSSSSHIAFISATGLVSTTATPP 180
           ISALQ Q+Q+LQA+LNAIR EILKYKYREA IIP    SS  HIA +S +G VS     P
Sbjct: 121 ISALQQQVQSLQAELNAIRAEILKYKYREANIIP----SSHQHIALLS-SGAVSVVTQSP 180

Query: 181 TAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG 233
           +  P  PP  PPP   PPPLPP+SSSSS       T+ A      IS +H+ +FG
Sbjct: 181 SLTPQQPPQPPPPPPPPPPLPPTSSSSSSIYTHQPTSAAD--YTTISNEHVSFFG 228

[Close]
BLAST of Cp4.1LG13g07450 vs. TrEMBL
Match: B9S4B8_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.8e-66
Identity = 155/237 (65.40%), Postives = 180/237 (75.95%), Query Frame = 1 

Query: 1   MDGELQEVDEI----KREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECP 60
           M  E +  DEI    KRE+       MGRR +L   G LNTITPCAACKLLRRRCAQECP
Sbjct: 1   MSRERERFDEIGKKIKREIDASSQ--MGRRHMLGPPGTLNTITPCAACKLLRRRCAQECP 60

Query: 61  FSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCM 120
           FSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCM
Sbjct: 61  FSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCM 120

Query: 121 GAISALQHQLQTLQADLNAIRTEILKYKYREA-IIPSPSSSSSSHIAFISATGLVSTTAT 180
           GAISALQ Q+QTLQA+LNA+R EILKYKYREA I+P      S+H+A +S +G VS  AT
Sbjct: 121 GAISALQQQIQTLQAELNAVRAEILKYKYREANILP------STHVALLS-SGAVSVAAT 180

Query: 181 PPTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG 233
             +   TPPP  PPP   PPPLPP+SSS+S+++    TT A    + IS++++ +FG
Sbjct: 181 SQSL--TPPPPTPPPPPPPPPLPPTSSSTSLYTHQ-PTTVAD--YSSISSENVSFFG 223

[Close]
BLAST of Cp4.1LG13g07450 vs. TrEMBL
Match: D7T4G0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02380 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.8e-66
Identity = 151/235 (64.26%), Postives = 173/235 (73.62%), Query Frame = 1 

Query: 1   MDGELQEVDEIKREVVE--GFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECPFS 60
           M  E +  DEI +++      +  MGRR +L   G LN+ITPCAACKLLRRRCAQECPFS
Sbjct: 1   MSRERERFDEIGKKIKRETDAFTQMGRRHMLGPPGTLNSITPCAACKLLRRRCAQECPFS 60

Query: 61  PYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGA 120
           PYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGA
Sbjct: 61  PYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGA 120

Query: 121 ISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPT 180
           ISALQ Q+Q+LQA+LNA+R EILKYKYREA I  P     SHIA +S +G VS  A PP 
Sbjct: 121 ISALQQQVQSLQAELNAVRAEILKYKYREANIIPP-----SHIALLS-SGAVSVAAPPPA 180

Query: 181 APPT-PPPSQPPPLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG 233
            PP   PP  PPP  +P PLPP+SSSS    P  S        + IS++++ YFG
Sbjct: 181 QPPAQAPPPPPPPPPIPLPLPPNSSSSMYTQPSSSAD-----YSTISSENVSYFG 224

[Close]
BLAST of Cp4.1LG13g07450 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 228.8 bits (582), Expect = 3.4e-60
Identity = 134/202 (66.34%), Postives = 151/202 (74.75%), Query Frame = 1 

Query: 10  EIKREVVEGFYPLMG-RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 69
           +IKRE     + + G RR +    G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK
Sbjct: 14  KIKREADAWPHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 73

Query: 70  FASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQT 129
           FASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q 
Sbjct: 74  FASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQA 133

Query: 130 LQADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQP 189
           LQA+L A+R+EILKYK REA + +    S+S +A    +G VS  A PP  P TP    P
Sbjct: 134 LQAELTAVRSEILKYKQREA-VATLIVPSNSQVAGFHNSGGVSVIAPPPQRPTTP----P 193

Query: 190 PPLSLPPPLPPSSSSSSIFSPP 211
            P +  PP P    SS +FS P
Sbjct: 194 QPTTAHPPSP----SSCVFSQP 206

[Close]
BLAST of Cp4.1LG13g07450 vs. TAIR10
Match: AT2G30340.1 (AT2G30340.1 LOB domain-containing protein 13)

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54
Identity = 124/222 (55.86%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 20  YPLMG-RRQILSQAG-ALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFG 79
           + +MG RR +    G  LNT+TPCAACKLLRRRCA+ECPFSPYFSPHEPHKFA+VHKVFG
Sbjct: 30  HAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFG 89

Query: 80  ASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIR 139
           ASNV+KML+EV ESQR DAANSLVYEANLRLRDP+YGCMGAISALQH +Q+LQ++L  +R
Sbjct: 90  ASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVR 149

Query: 140 TEILKYKYREAIIPSP-----SSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQPPPLS 199
           TEIL++KY+EA   +      +S++++         L S    PP  PP P P  P  LS
Sbjct: 150 TEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLS 209

Query: 200 ---LPPPLPP-----------------SSSSSSIFSPPISTT 215
               PPP PP                 SS+++S+++PP S+T
Sbjct: 210 SQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSST 251

[Close]
BLAST of Cp4.1LG13g07450 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 152.5 bits (384), Expect = 3.1e-37
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 1 

Query: 36  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 95
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 96  AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYK 145
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  ++E+ KY+
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

[Close]
BLAST of Cp4.1LG13g07450 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 151.4 bits (381), Expect = 7.0e-37
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 39  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 98
           +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNV+KML E+P  QRADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 99  SLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEIL 142
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ  L   + EIL
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEIL 109

[Close]
BLAST of Cp4.1LG13g07450 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 151.0 bits (380), Expect = 9.1e-37
Identity = 77/128 (60.16%), Postives = 95/128 (74.22%), Query Frame = 1 

Query: 39  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 98
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV KML E+P  QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 99  SLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREA-------IIP 158
           S+VYEAN R+RDPVYGC+GAIS+LQ Q+  LQA L   + E++  + R++       + P
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

[Close]
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: gi|659113801|ref|XP_008456762.1| (PREDICTED: LOB domain-containing protein 15-like [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 6.5e-77
Identity = 183/258 (70.93%), Postives = 193/258 (74.81%), Query Frame = 1 

Query: 4   ELQEVDEI----KREVVEG--FYP--LMGRRQ------ILSQAGA--------LNTITPC 63
           E QEVDEI    KRE+     FY   LMGRR       ILS + +        LNTITPC
Sbjct: 6   ESQEVDEIGKKIKREIESSNLFYDPNLMGRRNNNSNNLILSSSSSSQSSGISNLNTITPC 65

Query: 64  AACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLV 123
           AACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPE+QRADAANSLV
Sbjct: 66  AACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAANSLV 125

Query: 124 YEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSHI 183
           YEANLRLRDPVYGCMGAISALQHQL TLQ+DLNAI T+I KYK+    I  PSS +    
Sbjct: 126 YEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSSPN---- 185

Query: 184 AFISATGLVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPIST----TTAP 233
            FIS     S  ATPP APPTPP SQPPPLSLPPPLPPSSSSSS+FSPPI T    TT  
Sbjct: 186 -FISP----SPAATPPAAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTVV 245

[Close]
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: gi|449441568|ref|XP_004138554.1| (PREDICTED: LOB domain-containing protein 15 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 8.5e-77
Identity = 182/259 (70.27%), Postives = 194/259 (74.90%), Query Frame = 1 

Query: 4   ELQEVDEI----KREVVEG--FYP--LMGRRQ-------ILSQAGA--------LNTITP 63
           ELQEVDEI    KRE+     FY   LMGRR        ILS + +        LNTITP
Sbjct: 6   ELQEVDEIGKKIKREIESSNLFYDPNLMGRRNNNNNNNLILSSSSSSQSSGISNLNTITP 65

Query: 64  CAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSL 123
           CAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPE+QRADAANSL
Sbjct: 66  CAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPENQRADAANSL 125

Query: 124 VYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSH 183
           VYEANLRLRDPVYGCMGAISALQHQL TLQ+DLNAI T+I KYK+    I  PSS +   
Sbjct: 126 VYEANLRLRDPVYGCMGAISALQHQLHTLQSDLNAITTQIFKYKFTHHPINIPSSPN--- 185

Query: 184 IAFISATGLVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPIST----TTA 233
             F++     S  ATPP APPTPP SQPPPLSLPPPLPPSSSSSS+FSPPI T    TT 
Sbjct: 186 --FMAP----SPAATPPVAPPTPPHSQPPPLSLPPPLPPSSSSSSVFSPPIITTATSTTV 245

[Close]
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: gi|702425098|ref|XP_010067592.1| (PREDICTED: LOB domain-containing protein 15 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 270.8 bits (691), Expect = 2.2e-69
Identity = 156/236 (66.10%), Postives = 177/236 (75.00%), Query Frame = 1 

Query: 1   MDGELQEVDEI----KREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECP 60
           M  E +  DEI    KR+     + LMGRR +L   G LNTITPCAACKLLRRRCAQECP
Sbjct: 1   MSRERERFDEIGKKIKRDGDASHHHLMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECP 60

Query: 61  FSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCM 120
           FSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCM
Sbjct: 61  FSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCM 120

Query: 121 GAISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATP 180
           GAISALQ Q+Q+LQA+LNA+R+EILKYKYREA I SP+S    H+  +S  G VS  A P
Sbjct: 121 GAISALQQQIQSLQAELNAVRSEILKYKYREAGIISPTS----HVTLLSP-GTVSIAAPP 180

Query: 181 PTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG 233
           PT PP     Q  P SLPPPLPP+SS  S+F+ P  TT        IS++++ YFG
Sbjct: 181 PTPPP-----QSAPTSLPPPLPPASSPPSLFTQPGGTTD----YGGISSENVSYFG 222

[Close]
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: gi|702425094|ref|XP_010067591.1| (PREDICTED: LOB domain-containing protein 15 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 270.0 bits (689), Expect = 3.8e-69
Identity = 152/223 (68.16%), Postives = 173/223 (77.58%), Query Frame = 1 

Query: 10  EIKREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKF 69
           +IKR+     + LMGRR +L   G LNTITPCAACKLLRRRCAQECPFSPYFSPHEP KF
Sbjct: 15  KIKRDGDASHHHLMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKF 74

Query: 70  ASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTL 129
           ASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q+L
Sbjct: 75  ASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQIQSL 134

Query: 130 QADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQPP 189
           QA+LNA+R+EILKYKYREA I SP+S    H+  +S  G VS  A PPT PP     Q  
Sbjct: 135 QAELNAVRSEILKYKYREAGIISPTS----HVTLLSP-GTVSIAAPPPTPPP-----QSA 194

Query: 190 PLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG 233
           P SLPPPLPP+SS  S+F+ P  TT        IS++++ YFG
Sbjct: 195 PTSLPPPLPPASSPPSLFTQPGGTTD----YGGISSENVSYFG 223

[Close]
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: gi|1009121567|ref|XP_015877527.1| (PREDICTED: LOB domain-containing protein 15 [Ziziphus jujuba])

HSP 1 Score: 269.2 bits (687), Expect = 6.5e-69
Identity = 157/242 (64.88%), Postives = 177/242 (73.14%), Query Frame = 1 

Query: 1   MDGELQEVDEI----KREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECP 60
           M  E +  DEI    KRE        MGRR +L   G LNTITPCAACKLLRRRCAQECP
Sbjct: 1   MSRERERFDEIGKKIKRESDAAAATQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECP 60

Query: 61  FSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCM 120
           FSPYFSPHEP KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCM
Sbjct: 61  FSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCM 120

Query: 121 GAISALQHQLQTLQADLNAIRTEILKYKYREA-IIPSPSSS-----SSSHIAFISATGLV 180
           GAISALQ Q+QTLQA+LNA+R EILKYKYREA IIPS SS+        H+A +S++G V
Sbjct: 121 GAISALQQQVQTLQAELNAVRAEILKYKYREANIIPSSSSTLPHHHHHHHLALLSSSGAV 180

Query: 181 STTATPPTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPY 233
           S  A PP  PP  PPS PPP       P SSSSSS+++ P +        N IS++++ Y
Sbjct: 181 SVAAPPPAPPPPLPPSLPPP-------PTSSSSSSLYTQPANAAD----YNTISSENVSY 231

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g07450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD15_ARATH6.1e-5966.34LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
LBD13_ARATH2.9e-5355.86LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2[more]
LBD6_ARATH5.6e-3664.22LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1[more]
LBD12_ARATH1.2e-3568.93LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD4_ARATH1.6e-3560.16LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
BLAST of Cp4.1LG13g07450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8P6_CUCSA5.9e-7770.27Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013950 PE=4 SV=1[more]
A0A059BI15_EUCGR2.7e-6968.16Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03121 PE=4 SV=1[more]
A0A067JNV9_JATCU2.1e-6665.53Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03351 PE=4 SV=1[more]
B9S4B8_RICCO2.8e-6665.40LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4... [more]
D7T4G0_VITVI2.8e-6664.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02380 PE=4 SV=... [more]
BLAST of Cp4.1LG13g07450 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40470.13.4e-6066.34 LOB domain-containing protein 15[more]
AT2G30340.11.7e-5455.86 LOB domain-containing protein 13[more]
AT1G65620.13.1e-3764.22 Lateral organ boundaries (LOB) domain family protein[more]
AT2G30130.17.0e-3768.93 Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.19.1e-3760.16 LOB domain-containing protein 4[more]
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113801|ref|XP_008456762.1|6.5e-7770.93PREDICTED: LOB domain-containing protein 15-like [Cucumis melo][more]
gi|449441568|ref|XP_004138554.1|8.5e-7770.27PREDICTED: LOB domain-containing protein 15 [Cucumis sativus][more]
gi|702425098|ref|XP_010067592.1|2.2e-6966.10PREDICTED: LOB domain-containing protein 15 isoform X2 [Eucalyptus grandis][more]
gi|702425094|ref|XP_010067591.1|3.8e-6968.16PREDICTED: LOB domain-containing protein 15 isoform X1 [Eucalyptus grandis][more]
gi|1009121567|ref|XP_015877527.1|6.5e-6964.88PREDICTED: LOB domain-containing protein 15 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g07450.1Cp4.1LG13g07450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 40..137
score: 1.3
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 39..140
score: 25
NoneNo IPR availableunknownCoilCoilcoord: 119..139
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 14..231
score: 4.5E
NoneNo IPR availablePANTHERPTHR31301:SF2LOB DOMAIN-CONTAINING PROTEIN 15coord: 14..231
score: 4.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g07450Cucsa.326100Cucumber (Gy14) v1cgycpeB0859
Cp4.1LG13g07450CmaCh15G001570Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g07450CmaCh04G010740Cucurbita maxima (Rimu)cmacpeB709
Cp4.1LG13g07450CmoCh04G011400Cucurbita moschata (Rifu)cmocpeB662
Cp4.1LG13g07450CmoCh15G001700Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g07450Cla007276Watermelon (97103) v1cpewmB177
Cp4.1LG13g07450Cla006623Watermelon (97103) v1cpewmB196
Cp4.1LG13g07450Csa6G013950Cucumber (Chinese Long) v2cpecuB198
Cp4.1LG13g07450MELO3C019995Melon (DHL92) v3.5.1cpemeB165
Cp4.1LG13g07450ClCG11G005800Watermelon (Charleston Gray)cpewcgB159
Cp4.1LG13g07450ClCG07G004900Watermelon (Charleston Gray)cpewcgB179
Cp4.1LG13g07450CSPI06G02030Wild cucumber (PI 183967)cpecpiB199
Cp4.1LG13g07450Lsi04G010330Bottle gourd (USVL1VR-Ls)cpelsiB149
Cp4.1LG13g07450Lsi03G002750Bottle gourd (USVL1VR-Ls)cpelsiB143
Cp4.1LG13g07450MELO3C019995.2Melon (DHL92) v3.6.1cpemedB197
Cp4.1LG13g07450CsaV3_6G002180Cucumber (Chinese Long) v3cpecucB0238
Cp4.1LG13g07450CsaV3_5G010810Cucumber (Chinese Long) v3cpecucB0233
Cp4.1LG13g07450Bhi07G000432Wax gourdcpewgoB0261
Cp4.1LG13g07450Bhi04G001849Wax gourdcpewgoB0247
Cp4.1LG13g07450CsGy6G002110Cucumber (Gy14) v2cgybcpeB741
Cp4.1LG13g07450Carg02149Silver-seed gourdcarcpeB0366
Cp4.1LG13g07450Carg00177Silver-seed gourdcarcpeB0934
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g07450Cp4.1LG01g11560Cucurbita pepo (Zucchini)cpecpeB202
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g07450Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG13g07450Cucurbita maxima (Rimu)cmacpeB705
Cp4.1LG13g07450Cucurbita moschata (Rifu)cmocpeB657
Cp4.1LG13g07450Cucumber (Gy14) v2cgybcpeB483
Cp4.1LG13g07450Silver-seed gourdcarcpeB0031
Cp4.1LG13g07450Cucumber (Chinese Long) v3cpecucB0208