Lsi03G000950 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G000950
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEcdysone receptor
Locationchr03 : 1371556 .. 1372542 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCTTTTCTGTTCCTGAATTTCTGCTTGGGTTCTTCCATTTCTCAGAGAACTGACCCAACTTCTTGTGGTAAAATCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAACTAGGTCCTTCCCATTAAACCATATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAACTTGATTACACCACAAAAACTCTCATAATCTCTCATTTTCCTTATTCTTCTTCTTCAAACCATTTTGTTTCCCCTTCCCTTCTATTCTCAGGCCTTCCTTCTCCACCAGACCTCATCAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAATCCCATCTCTGAATCTATCCAAAACTGCCCAAAATTTGAAGCTTTACAAAAGCAAGATGAAAAAGAAATGTCCCAAAAAACATCTTGTTTGATCTTTGAGGATCTTGGAAAGCTGAAGGAGAGCTTCCATCCTAACGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCTTCAGACTTTGACCTAAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCCTGTAATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGAGTGCAGTATGTTTCTGATTCTCTAATCTTACAAAGTTAATTTTTACTTGTTGACATTTGATTTGAGACTCATGATATTTACTGCTTCTTCTATGATTATGCAGAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTGTATTTCTCCTTTCCTTGCTGGCTGTTTTTGTGATGATCATTTTGTCTATGTAATGGATGTTTAATCTAAAAGAAACTCTTCTCATTCGATGATATACATAAAATCTGGCTTGGTTTATTTGTGTTG

mRNA sequence

ATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCTTTTCTGTTCCTGAATTTCTGCTTGGGTTCTTCCATTTCTCAGAGAACTGACCCAACTTCTTGTGGTAAAATCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAACTAGGTCCTTCCCATTAAACCATATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAACTTGATTACACCACAAAAACTCTCATAATCTCTCATTTTCCTTATTCTTCTTCTTCAAACCATTTTGTTTCCCCTTCCCTTCTATTCTCAGGCCTTCCTTCTCCACCAGACCTCATCAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAATCCCATCTCTGAATCTATCCAAAACTGCCCAAAATTTGAAGCTTTACAAAAGCAAGATGAAAAAGAAATGTCCCAAAAAACATCTTGTTTGATCTTTGAGGATCTTGGAAAGCTGAAGGAGAGCTTCCATCCTAACGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCTTCAGACTTTGACCTAAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCCTGTAATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGAGTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTGTATTTCTCCTTTCCTTGCTGGCTGTTTTTGTGATGATCATTTTGTCTATGTAATGGATGTTTAATCTAAAAGAAACTCTTCTCATTCGATGATATACATAAAATCTGGCTTGGTTTATTTGTGTTG

Coding sequence (CDS)

ATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCTTTTCTGTTCCTGAATTTCTGCTTGGGTTCTTCCATTTCTCAGAGAACTGACCCAACTTCTTGTGGTAAAATCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAACTAGGTCCTTCCCATTAAACCATATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAACTTGATTACACCACAAAAACTCTCATAATCTCTCATTTTCCTTATTCTTCTTCTTCAAACCATTTTGTTTCCCCTTCCCTTCTATTCTCAGGCCTTCCTTCTCCACCAGACCTCATCAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAATCCCATCTCTGAATCTATCCAAAACTGCCCAAAATTTGAAGCTTTACAAAAGCAAGATGAAAAAGAAATGTCCCAAAAAACATCTTGTTTGATCTTTGAGGATCTTGGAAAGCTGAAGGAGAGCTTCCATCCTAACGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCTTCAGACTTTGACCTAAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCCTGTAATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGAGTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTGTATTTCTCCTTTCCTTGCTGGCTGTTTTTGTGATGATCATTTTGTCTATGTAA

Protein sequence

MQKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILCRSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSLLLFHCSNPTNPISESIQNCPKFEALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDLKCSHFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLECKDKVFSKGGIVRPGGVFLLSLLAVFVMIILSM
Homology
[Close]
BLAST of Lsi03G000950 vs. TrEMBL
Match: B9T5T7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1180720 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.0e-68
Identity = 139/274 (50.73%), Postives = 185/274 (67.52%), Query Frame = 1 

Query: 2   QKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILCR 61
           +K++  H L S L  N C  + +S     + CGKI IQ PFLSS++   S  L HMILC 
Sbjct: 5   KKLKFIHYLLSIL--NLCFITCLSHHISTSFCGKIPIQSPFLSSNSTVSSSLLKHMILCS 64

Query: 62  SQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSLL 121
           SQKL+FRTS+GLFP+S +DY TKT+ IS  P   SS  FVSPSLL +G P+ P ++NSL+
Sbjct: 65  SQKLFFRTSLGLFPVSSIDYATKTITISQ-PSCPSSQQFVSPSLLSAGFPTSP-MLNSLI 124

Query: 122 LFHCSNPTNPISESIQNCPKFEALQKQDE---KEMSQKTSCLIFEDLGKLKESFHPNDLK 181
           LF+CSN   PI+ S  NC  F+A     +   +E+    SCL+  +L KL +SFHP DL 
Sbjct: 125 LFNCSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLN 184

Query: 182 CSHFRRVYRNS-SDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVL 241
           CSH+ R+YR+S +D D   GY+LGT ISFDIPDHVPN C+ECEKP+G+CGVGL+CICH  
Sbjct: 185 CSHYSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPK 244

Query: 242 ECKDKVFSKGGIVRP-GGVFLLSLLAVFVMIILS 271
           ECK+KV S  G ++P   + + S+L + V++  +
Sbjct: 245 ECKNKVISTAGSIKPSANIVIFSMLPLIVLVFFT 274

[Close]
BLAST of Lsi03G000950 vs. TrEMBL
Match: A0A061GUL7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041497 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.5e-67
Identity = 142/269 (52.79%), Postives = 179/269 (66.54%), Query Frame = 1 

Query: 2   QKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILCR 61
           +K+   H L SF+       +S +Q T    CGKI++Q PFLS  N T S PLN MI C+
Sbjct: 5   KKLNILHFLLSFVLF---FTTSTAQHTPTNHCGKIELQTPFLSQ-NSTISSPLNRMIKCK 64

Query: 62  SQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSLL 121
           SQKLYFRTSIGLFPIS +DYT+KTL +SH P  SSS  +VSP+LL +G PSPP   NSLL
Sbjct: 65  SQKLYFRTSIGLFPISSIDYTSKTLTVSH-PSCSSSQQYVSPALLSAGFPSPPHP-NSLL 124

Query: 122 LFHCSNPTNPISESIQNCPKFE---ALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDLK 181
           LF+CS+  +P S  I+NC +     A  +  E E+    SCL+ +D+ KL   FHPNDL 
Sbjct: 125 LFNCSHKRHPKSSLIRNCTRLHICGAAFEVQEPEIKVPYSCLLVQDVEKLDTDFHPNDLS 184

Query: 182 CSHFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLE 241
           CS +RRVYR S   +   G +LGT ISFDIPDHVP+ CNEC+KP+G+CGVGL+CICH  E
Sbjct: 185 CSDYRRVYRRSLSEEDYEGVELGTRISFDIPDHVPDICNECKKPNGNCGVGLKCICHAKE 244

Query: 242 CKDKVFSKGGIVRPGGVFLLSLLAVFVMI 268
           CKDKV S    +  G  FL  L ++ V++
Sbjct: 245 CKDKVISAARSLSTGISFLFPLFSIIVLM 267

[Close]
BLAST of Lsi03G000950 vs. TrEMBL
Match: A0A067KE41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11265 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.2e-66
Identity = 141/260 (54.23%), Postives = 178/260 (68.46%), Query Frame = 1 

Query: 14  LFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILCRSQKLYFRTSIGL 73
           L LN    + +SQ T    CGKI IQ PF+SS N T S  LNH +LCRS KLYFRTS+GL
Sbjct: 16  LILNLFFITCLSQHTSSILCGKIPIQIPFISS-NSTVSSLLNHSMLCRSHKLYFRTSLGL 75

Query: 74  FPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSLLLFHCSNPTNPIS 133
           FP+S ++YTTKTL ISH P  SSS HF+SP+LL +G P+P    NSLLLF+CS+  +P +
Sbjct: 76  FPVSSVNYTTKTLTISH-PSRSSSQHFISPALLLAGFPTPLTP-NSLLLFNCSSKNHPGT 135

Query: 134 ESIQNCPK---FEALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDLKCSHFRRVYRNSS 193
             I NC +   F A  +  E+E+    SCL+  D+ KL   FHP DL CSH+R VYR+SS
Sbjct: 136 SFIGNCSRLKAFAASSQNQEQELEVPYSCLLVNDIEKLDGGFHPKDLNCSHYRLVYRSSS 195

Query: 194 DFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLECKDKVFSKGGIV 253
             D  + Y+LG+ ISFDIPDHVP+ CNEC+KP+G+CGVGLRCICH  ECKDKV S  G V
Sbjct: 196 KDDDYSEYELGSRISFDIPDHVPDICNECQKPNGNCGVGLRCICHPKECKDKVISIAGSV 255

Query: 254 RPGGVFLLSLLAVFVMIILS 271
           +  G  +L  +  F++I +S
Sbjct: 256 KQFGNNVLISVLSFIVIFVS 272

[Close]
BLAST of Lsi03G000950 vs. TrEMBL
Match: A0A068UFJ7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024038001 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.3e-64
Identity = 136/274 (49.64%), Postives = 179/274 (65.33%), Query Frame = 1 

Query: 1   MQKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILC 60
           MQ ++  HLLQ+ L L     +S+SQ T  ++CGKI+IQ PF    N T   PLNHM+LC
Sbjct: 1   MQILKKVHLLQALLLLKISFPTSVSQETTISNCGKIRIQSPFFLH-NSTYLSPLNHMLLC 60

Query: 61  RSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSL 120
           ++QKLYFRTS+GLF +S +DY TK L ISH   SS+S HF+SP+ L +G P PP   NSL
Sbjct: 61  KAQKLYFRTSLGLFQVSSIDYETKLLTISHSSCSSAS-HFISPTSLSAGFPHPPQP-NSL 120

Query: 121 LLFHCSNPTNPISESIQNCPKFEALQKQDEKEMSQK-----TSCLIFEDLGKLKESFHPN 180
           +L++C +  N  S  + NC    AL     K   Q+     +SC + +D+ KL   FHP 
Sbjct: 121 VLYNCLSQKNSASPYMSNCSSLPALGGSCSKLHQQELRKGISSCFVVQDVRKLDGDFHPK 180

Query: 181 DLKCSHFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICH 240
            + C+H+RR+YRN+S  D   G++LGT ISFDI  HVPNPC+EC+KPDG+CGVGLRCICH
Sbjct: 181 QMNCTHYRRMYRNASVDDNSCGFELGTRISFDI--HVPNPCDECKKPDGNCGVGLRCICH 240

Query: 241 VLECKDKVFSKGGIVRPGGVFLLSLLAVFVMIIL 270
             ECKDKV S G ++ P G  L S +   +M+ L
Sbjct: 241 ARECKDKVVSLGVVLNPFGSVLFSFVCFVIMMDL 269

[Close]
BLAST of Lsi03G000950 vs. TrEMBL
Match: B9HQU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15040g PE=4 SV=2)

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-64
Identity = 139/271 (51.29%), Postives = 183/271 (67.53%), Query Frame = 1 

Query: 2   QKIQSFHLLQSFLFLNFCLGSSISQRTDPTS-CGKIQIQPPFLSSSNLTRSFPLNHMILC 61
           +K+  F+ L   L +NF   SS+ Q T  TS CGKIQIQ PF S ++  +S PLN MILC
Sbjct: 5   KKLNFFYPLLLTL-INFFFTSSLCQHTASTSFCGKIQIQTPFWSPNSTAKS-PLNRMILC 64

Query: 62  RSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSL 121
           RSQKLYFRTS+GLFP+S ++Y +KTL ISH    SSS H++SPSLL +G P+PP   NSL
Sbjct: 65  RSQKLYFRTSLGLFPVSSINYASKTLTISHSS-CSSSRHYISPSLLSAGFPTPPQP-NSL 124

Query: 122 LLFHCSNPTNPISESIQNCPKFE---ALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDL 181
           LL +C N  +P+  S+ NC       A  K   +++    SC +   L  L ++FHP DL
Sbjct: 125 LLLNCLNSNSPMPSSMLNCSHLNPCAASAKTQRQKLEAPHSCSLV-GLENLDKAFHPKDL 184

Query: 182 KCSHFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVL 241
            CSH+ +VYR S D +   GY+LGT ISFDIPDHVP+ CNEC+K +G+CGVGL+CICH  
Sbjct: 185 NCSHYSQVYRRSLDDEDYKGYELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQ 244

Query: 242 ECKDKVFSKGGIVRPGGVFLLSLLAVFVMII 269
           +C+DKV S  G  +P G  LLS+L+ FV+++
Sbjct: 245 DCRDKVISMAGSTKPVGNVLLSVLSFFVVLV 270

[Close]
BLAST of Lsi03G000950 vs. TAIR10
Match: AT3G44716.1 (AT3G44716.1 unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.8e-10
Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 1 

Query: 199 KLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLECKDKVFSKGGIVRPGGVFLL 258
           KL   +S ++  H+P+ C  CE+P G+CGV LRC+CH  ECK+KV + G   R     L 
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFGTKSRALSGNLQ 129

Query: 259 SLLAVFVMIIL 270
            LL + +++ +
Sbjct: 130 QLLPLLLLLAM 140

[Close]
BLAST of Lsi03G000950 vs. NCBI nr
Match: gi|449443410|ref|XP_004139470.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus])

HSP 1 Score: 477.2 bits (1227), Expect = 1.8e-131
Identity = 236/271 (87.08%), Postives = 252/271 (92.99%), Query Frame = 1 

Query: 1   MQKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILC 60
           MQKIQSFHLLQSFLFLNFCL SSISQ  DPTSCGK QIQPPFLSSSNL   FPLNH+ILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 61  RSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSL 120
           RSQKLYFRTSIGLFPISK+DYTTKTLIIS+F   SSS+HFVSPSLL SGLPSPP LINSL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNF--LSSSHHFVSPSLLSSGLPSPPHLINSL 120

Query: 121 LLFHCSNPTNPISESIQNCPKFEALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDLKCS 180
           LLF+CSNPT PI+ES QNCPKFEALQ QDE++ SQK+SCLIFEDLGKL+ESFHPNDLKCS
Sbjct: 121 LLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCS 180

Query: 181 HFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLECK 240
           HFRRVYRNSSD +LKNGYKLGTSISFDIPDHVPNPC+ECEKPDGHCGVGLRCICHVL+CK
Sbjct: 181 HFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCK 240

Query: 241 DKVFSKGGIVRPGGVFLLSLLAVFVMIILSM 272
           DKVFSKGGIVRP G FL+SLLAVFV+II+SM
Sbjct: 241 DKVFSKGGIVRPCGKFLISLLAVFVVIIISM 269

[Close]
BLAST of Lsi03G000950 vs. NCBI nr
Match: gi|659071772|ref|XP_008461870.1| (PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo])

HSP 1 Score: 463.8 bits (1192), Expect = 2.1e-127
Identity = 228/271 (84.13%), Postives = 246/271 (90.77%), Query Frame = 1 

Query: 1   MQKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILC 60
           MQK  SFHLLQSFLFLNFCLGSSI +  DPTSCGK Q+QPPFLSSSNL   FPLNHMILC
Sbjct: 1   MQKFLSFHLLQSFLFLNFCLGSSIPKENDPTSCGKFQLQPPFLSSSNLNGPFPLNHMILC 60

Query: 61  RSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSL 120
           RSQKLYFRTSIG+FPISK+DYTTKTLIIS+F   SSS+HFVSPSLL SGLPSPP LINSL
Sbjct: 61  RSQKLYFRTSIGVFPISKIDYTTKTLIISNF--LSSSHHFVSPSLLSSGLPSPPHLINSL 120

Query: 121 LLFHCSNPTNPISESIQNCPKFEALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDLKCS 180
           LLF+CSNPT PI+ES  NCPK  ALQ QDE+++SQK SCLIFEDLGKL+ESFHPNDLKCS
Sbjct: 121 LLFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLKCS 180

Query: 181 HFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLECK 240
           HFRRVYRNSSD +LKNGYKLGTSISFDIPDHVPN C+ECEKPDGHCGVGLRCICHVLECK
Sbjct: 181 HFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLECK 240

Query: 241 DKVFSKGGIVRPGGVFLLSLLAVFVMIILSM 272
           DKVFSKGGIVRPGG  L+SL+AVFV+II+SM
Sbjct: 241 DKVFSKGGIVRPGGKILISLMAVFVVIIISM 269

[Close]
BLAST of Lsi03G000950 vs. NCBI nr
Match: gi|449443412|ref|XP_004139471.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 2.0e-125
Identity = 222/252 (88.10%), Postives = 235/252 (93.25%), Query Frame = 1 

Query: 1   MQKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILC 60
           MQKIQSFHLLQSFLFLNFCL SSISQ  DPTSCGK QIQPPFLSSSNL   FPLNH+ILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 61  RSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSL 120
           RSQKLYFRTSIGLFPISK+DYTTKTLIIS+F   SSS+HFVSPSLL SGLPSPP LINSL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNF--LSSSHHFVSPSLLSSGLPSPPHLINSL 120

Query: 121 LLFHCSNPTNPISESIQNCPKFEALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDLKCS 180
           LLF+CSNPT PI+ES QNCPKFEALQ QDE++ SQK+SCLIFEDLGKL+ESFHPNDLKCS
Sbjct: 121 LLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCS 180

Query: 181 HFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLECK 240
           HFRRVYRNSSD +LKNGYKLGTSISFDIPDHVPNPC+ECEKPDGHCGVGLRCICHVL+CK
Sbjct: 181 HFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCK 240

Query: 241 DKVFSKGGIVRP 253
           DKVFSKGGIVRP
Sbjct: 241 DKVFSKGGIVRP 250

[Close]
BLAST of Lsi03G000950 vs. NCBI nr
Match: gi|255585863|ref|XP_002533606.1| (PREDICTED: uncharacterized protein LOC8276105 [Ricinus communis])

HSP 1 Score: 267.3 bits (682), Expect = 2.9e-68
Identity = 139/274 (50.73%), Postives = 185/274 (67.52%), Query Frame = 1 

Query: 2   QKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILCR 61
           +K++  H L S L  N C  + +S     + CGKI IQ PFLSS++   S  L HMILC 
Sbjct: 5   KKLKFIHYLLSIL--NLCFITCLSHHISTSFCGKIPIQSPFLSSNSTVSSSLLKHMILCS 64

Query: 62  SQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSLL 121
           SQKL+FRTS+GLFP+S +DY TKT+ IS  P   SS  FVSPSLL +G P+ P ++NSL+
Sbjct: 65  SQKLFFRTSLGLFPVSSIDYATKTITISQ-PSCPSSQQFVSPSLLSAGFPTSP-MLNSLI 124

Query: 122 LFHCSNPTNPISESIQNCPKFEALQKQDE---KEMSQKTSCLIFEDLGKLKESFHPNDLK 181
           LF+CSN   PI+ S  NC  F+A     +   +E+    SCL+  +L KL +SFHP DL 
Sbjct: 125 LFNCSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLN 184

Query: 182 CSHFRRVYRNS-SDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVL 241
           CSH+ R+YR+S +D D   GY+LGT ISFDIPDHVPN C+ECEKP+G+CGVGL+CICH  
Sbjct: 185 CSHYSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPK 244

Query: 242 ECKDKVFSKGGIVRP-GGVFLLSLLAVFVMIILS 271
           ECK+KV S  G ++P   + + S+L + V++  +
Sbjct: 245 ECKNKVISTAGSIKPSANIVIFSMLPLIVLVFFT 274

[Close]
BLAST of Lsi03G000950 vs. NCBI nr
Match: gi|743792457|ref|XP_011044555.1| (PREDICTED: uncharacterized protein LOC105139699 [Populus euphratica])

HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68
Identity = 143/270 (52.96%), Postives = 185/270 (68.52%), Query Frame = 1 

Query: 2   QKIQSFHLLQSFLFLNFCLGSSISQRTDPTS-CGKIQIQPPFLSSSNLTRSFPLNHMILC 61
           +K+  F+ L   L +NF   SS+ Q T  TS CGKIQIQ PF S ++  +S PLN MILC
Sbjct: 5   KKLNLFYPLLLTL-INFFFTSSLCQHTASTSFCGKIQIQTPFWSPNSTAKS-PLNRMILC 64

Query: 62  RSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSL 121
           RSQKLYFRTS+GLFP+S ++Y +KTL ISH  Y SSS H++SPSLL +G PSPP   NSL
Sbjct: 65  RSQKLYFRTSLGLFPVSSINYASKTLTISH-SYCSSSRHYISPSLLSAGFPSPPQP-NSL 124

Query: 122 LLFHCSNPTNPISESIQNCPKFE---ALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDL 181
           LLF+C N  +P+  S+ NC       A  K   +++    SC + +DL  L ++FHP DL
Sbjct: 125 LLFNCLNSNSPMPSSMLNCSHLNPCAASAKTQRQKLEAPYSCSLVDDLENLGKAFHPKDL 184

Query: 182 KCSHFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVL 241
            CSH+ +VYR S D +   GY+LGT ISFDIPDHVP+ CNEC+K +G+CGVGL+CICH  
Sbjct: 185 NCSHYSQVYRRSLDDEDYKGYELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQ 244

Query: 242 ECKDKVFSKGGIVRPGGVFLLSLLAVFVMI 268
           +CKDKV S  G  +P    LLS+L+ FV++
Sbjct: 245 DCKDKVISMAGSTKPVDSVLLSVLSFFVLV 270

The following BLAST results are available for this feature:
BLAST of Lsi03G000950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi03G000950 vs. TrEMBL
Match NameE-valueIdentityDescription
B9T5T7_RICCO2.0e-6850.73Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1180720 PE=4 SV=1[more]
A0A061GUL7_THECC8.5e-6752.79Uncharacterized protein OS=Theobroma cacao GN=TCM_041497 PE=4 SV=1[more]
A0A067KE41_JATCU3.2e-6654.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11265 PE=4 SV=1[more]
A0A068UFJ7_COFCA2.3e-6449.64Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024038001 PE=4 SV=1[more]
B9HQU1_POPTR3.9e-6451.29Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15040g PE=4 SV=2[more]
BLAST of Lsi03G000950 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G44716.13.8e-1039.44 unknown protein[more]
BLAST of Lsi03G000950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443410|ref|XP_004139470.1|1.8e-13187.08PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus][more]
gi|659071772|ref|XP_008461870.1|2.1e-12784.13PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo][more]
gi|449443412|ref|XP_004139471.1|2.0e-12588.10PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus][more]
gi|255585863|ref|XP_002533606.1|2.9e-6850.73PREDICTED: uncharacterized protein LOC8276105 [Ricinus communis][more]
gi|743792457|ref|XP_011044555.1|4.9e-6852.96PREDICTED: uncharacterized protein LOC105139699 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G000950.1Lsi03G000950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33355FAMILY NOT NAMEDcoord: 1..269
score: 1.5
NoneNo IPR availablePANTHERPTHR33355:SF7SUBFAMILY NOT NAMEDcoord: 1..269
score: 1.5