Cucsa.200000 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.200000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ecdysone receptor
Location	scaffold01365 : 377849 .. 379012 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATCAGACCAGAAAGAACAAAGAAAACAACAAAATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCCTTTCTGTTCCTGAATTTTTGCTTATGTTCTTCCATTTCTCAGGAAAATGACCCAACGTCTTGTGGTAAATTCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAAATGGGCCCTTCCCATTAAACCATGTGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAAATTGATTACACCACAAAAACTCTTATAATCTCCAATTTtCTTtCTTCTTCACACCATTTTGTTtCCCCTTCCCTTTtATCCTCAGGGCTTCCTTCACCACCACACCTTATCAACTCACTCCTCCTCTTCAACTGCTCTAACCCAACAAAACCTATCACTGAATCTGCCCAAAACTGCCCAAAATTTGAAGCTTTACAAAACCAAGATGAAGAACAAACATCCCAAAAATCTTCTTGTTTGATCTTTGAGGATCTTGGAAAGCTTCAGGAGAGCTTCCATCCAAATGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCCTCAGATGTTGAACTTAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCGTGTCATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGATTGCAGTATGTTTCTGATTCTTCGATCTTACCAAGTTAATATTTAGTTTTTtATATTTAATTCCAGATTCATGATATTTACTGCTTGTTCTATGATTTTGCAGAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTTGTGGTAAATTTCTCATTTCTTTGCTGGCTGTTTTTGTGGTGATCATTATTTCCATGTAATGCATATTAACTTTTCTCATTCAATGATATACATGAAATCTGACTTGGTTTATTTGTATTGACTTGTCTATATTGCATCTAGTAAAGAGGTGATCTTTCACCAATATTTTTGGTATGTTAAAAATAAATTACATCAAACAGTAAGGTTCTCCCACTTAGGATATGAAGTCAGGATCTATCCATTCTGAATCATATCAAATATGACTTAGTAGTGATCTCT

mRNA sequence

ACAAATCAGACCAGAAAGAACAAAGAAAACAACAAAATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCCTTTCTGTTCCTGAATTTTTGCTTATGTTCTTCCATTTCTCAGGAAAATGACCCAACGTCTTGTGGTAAATTCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAAATGGGCCCTTCCCATTAAACCATGTGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAAATTGATTACACCACAAAAACTCTTATAATCTCCAATTTTCTTTCTTCTTCACACCATTTTGTTTCCCCTTCCCTTTTATCCTCAGGGCTTCCTTCACCACCACACCTTATCAACTCACTCCTCCTCTTCAACTGCTCTAACCCAACAAAACCTATCACTGAATCTGCCCAAAACTGCCCAAAATTTGAAGCTTTACAAAACCAAGATGAAGAACAAACATCCCAAAAATCTTCTTGTTTGATCTTTGAGGATCTTGGAAAGCTTCAGGAGAGCTTCCATCCAAATGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCCTCAGATGTTGAACTTAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCGTGTCATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGATTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTTGTGGTAAATTTCTCATTTCTTTGCTGGCTGTTTTTGTGGTGATCATTATTTCCATGTAATGCATATTAACTTTTCTCATTCAATGATATACATGAAATCTGACTTGGTTTATTTGTATTGACTTGTCTATATTGCATCTAGTAAAGAGGTGATCTTTCACCAATATTTTTGGTATGTTAAAAATAAATTACATCAAACAGTAAGGTTCTCCCACTTAGGATATGAAGTCAGGATCTATCCATTCTGAATCATATCAAATATGACTTAGTAGTGATCTCT

Coding sequence (CDS)

ACAAATCAGACCAGAAAGAACAAAGAAAACAACAAAATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCCTTTCTGTTCCTGAATTTTTGCTTATGTTCTTCCATTTCTCAGGAAAATGACCCAACGTCTTGTGGTAAATTCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAAATGGGCCCTTCCCATTAAACCATGTGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAAATTGATTACACCACAAAAACTCTTATAATCTCCAATTTtCTTtCTTCTTCACACCATTTTGTTtCCCCTTCCCTTTtATCCTCAGGGCTTCCTTCACCACCACACCTTATCAACTCACTCCTCCTCTTCAACTGCTCTAACCCAACAAAACCTATCACTGAATCTGCCCAAAACTGCCCAAAATTTGAAGCTTTACAAAACCAAGATGAAGAACAAACATCCCAAAAATCTTCTTGTTTGATCTTTGAGGATCTTGGAAAGCTTCAGGAGAGCTTCCATCCAAATGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCCTCAGATGTTGAACTTAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCGTGTCATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGATTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTTGTGGTAAATTTCTCATTTCTTTGCTGGCTGTTTTTGTGGTGATCATTATTTCCATGTAA

Protein sequence

TNQTRKNKENNKMQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDKVFSKGGIVRPCGKFLISLLAVFVVIIISM*

Homology

[Close]

BLAST of Cucsa.200000 vs. TrEMBL
Match: B9T5T7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1180720 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.7e-68
Identity = 135/270 (50.00%), Postives = 179/270 (66.30%), Query Frame = 1


Query: 14  QKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILCR 73
           +K++  H L S L  N C  + +S     + CGK  IQ PFLSS++      L H+ILC 
Sbjct: 5   KKLKFIHYLLSIL--NLCFITCLSHHISTSFCGKIPIQSPFLSSNSTVSSSLLKHMILCS 64

Query: 74  SQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLLL 133
           SQKL+FRTS+GLFP+S IDY TKT+ IS     SS  FVSPSLLS+G P+ P ++NSL+L
Sbjct: 65  SQKLFFRTSLGLFPVSSIDYATKTITISQPSCPSSQQFVSPSLLSAGFPTSP-MLNSLIL 124

Query: 134 FNCSNPTKPITESAQNCPKFEALQNQDE---EQTSQKSSCLIFEDLGKLQESFHPNDLKC 193
           FNCSN   PIT S  NC  F+A  +  +   ++     SCL+  +L KL +SFHP DL C
Sbjct: 125 FNCSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLNC 184

Query: 194 SHFRRVYRNS-SDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 253
           SH+ R+YR+S +D +   GY+LGT ISFDIPDHVPN C ECEKP+G+CGVGL+CICH  +
Sbjct: 185 SHYSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPKE 244

Query: 254 CKDKVFSKGGIVRPCGKFLISLLAVFVVII 279
           CK+KV S  G ++P    +I  +   +V++
Sbjct: 245 CKNKVISTAGSIKPSANIVIFSMLPLIVLV 271

[Close]

BLAST of Cucsa.200000 vs. TrEMBL
Match: B9HQU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15040g PE=4 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 4.8e-65
Identity = 139/271 (51.29%), Postives = 179/271 (66.05%), Query Frame = 1


Query: 14  QKIQSFHLLQSFLFLNFCLCSSISQENDPTS-CGKFQIQPPFLSSSNLNGPFPLNHVILC 73
           +K+  F+ L   L +NF   SS+ Q    TS CGK QIQ PF S  N     PLN +ILC
Sbjct: 5   KKLNFFYPLLLTL-INFFFTSSLCQHTASTSFCGKIQIQTPFWSP-NSTAKSPLNRMILC 64

Query: 74  RSQKLYFRTSIGLFPISKIDYTTKTLIISNF-LSSSHHFVSPSLLSSGLPSPPHLINSLL 133
           RSQKLYFRTS+GLFP+S I+Y +KTL IS+   SSS H++SPSLLS+G P+PP   NSLL
Sbjct: 65  RSQKLYFRTSLGLFPVSSINYASKTLTISHSSCSSSRHYISPSLLSAGFPTPPQP-NSLL 124

Query: 134 LFNCSNPTKPITESAQNC----PKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDL 193
           L NC N   P+  S  NC    P   + + Q ++  +  S  L+   L  L ++FHP DL
Sbjct: 125 LLNCLNSNSPMPSSMLNCSHLNPCAASAKTQRQKLEAPHSCSLV--GLENLDKAFHPKDL 184

Query: 194 KCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVL 253
            CSH+ +VYR S D E   GY+LGT ISFDIPDHVP+ C+EC+K +G+CGVGL+CICH  
Sbjct: 185 NCSHYSQVYRRSLDDEDYKGYELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQ 244

Query: 254 DCKDKVFSKGGIVRPCGKFLISLLAVFVVII 279
           DC+DKV S  G  +P G  L+S+L+ FVV++
Sbjct: 245 DCRDKVISMAGSTKPVGNVLLSVLSFFVVLV 270

[Close]

BLAST of Cucsa.200000 vs. TrEMBL
Match: W9R0T5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008982 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.4e-64
Identity = 137/278 (49.28%), Postives = 181/278 (65.11%), Query Frame = 1


Query: 13  MQKIQSFHLLQSFLFLNFCLCSSISQENDPTS--CGKFQIQPPF-LSSSNLNGPFPLNHV 72
           M+  + FHLL  FL +    CS+ S   D  +  CG+  IQ PF + + NL+   PLNH+
Sbjct: 1   MRAFKEFHLLHLFLLIILIFCSATSCAEDALTRTCGQIPIQEPFSIQTHNLS--IPLNHM 60

Query: 73  ILCRSQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLIN 132
           +LC+ QKLY+RTS+GLFPIS I+YTTK   IS+   S S H+VSP LLS+G P+PP   N
Sbjct: 61  LLCKYQKLYYRTSLGLFPISSINYTTKVFTISHPSCSHSLHYVSPLLLSAGFPTPPQP-N 120

Query: 133 SLLLFNCSNPTKPITE------SAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESF 192
           SLLLFNCSN  K ++        +Q C     ++ ++ E+    ++CL+ + + KL  SF
Sbjct: 121 SLLLFNCSNGKKNLSPFIRNHTCSQTCRPSPKIRVKEVEE-GFSANCLLIDHVEKLDMSF 180

Query: 193 HPNDLKCSHFRRVYR--NSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGL 252
           HP DL CSH+RR YR  +S D     G++LGT ISFDIPDH PN C ECEKP+G+CGVGL
Sbjct: 181 HPRDLNCSHYRRFYRVESSDDDGEFEGFELGTRISFDIPDHAPNVCSECEKPNGNCGVGL 240

Query: 253 RCICHVLDCKDKVFSKGGIVRPCGKFLISLLAVFVVII 279
           RCICH  +CKDKV SKGG +   G  L+SL+   VV++
Sbjct: 241 RCICHAKECKDKVVSKGGSINGFGNVLVSLVCFLVVMV 274

[Close]

BLAST of Cucsa.200000 vs. TrEMBL
Match: A0A067KE41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11265 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.0e-64
Identity = 133/260 (51.15%), Postives = 173/260 (66.54%), Query Frame = 1


Query: 26  LFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILCRSQKLYFRTSIGL 85
           L LN    + +SQ      CGK  IQ PF+SS++      LNH +LCRS KLYFRTS+GL
Sbjct: 16  LILNLFFITCLSQHTSSILCGKIPIQIPFISSNSTVSSL-LNHSMLCRSHKLYFRTSLGL 75

Query: 86  FPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLLLFNCSNPTKPITE 145
           FP+S ++YTTKTL IS+   SSS HF+SP+LL +G P+P    NSLLLFNCS+   P T 
Sbjct: 76  FPVSSVNYTTKTLTISHPSRSSSQHFISPALLLAGFPTPL-TPNSLLLFNCSSKNHPGTS 135

Query: 146 SAQNCPKFEAL----QNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHFRRVYRNSS 205
              NC + +A     QNQ++E      SCL+  D+ KL   FHP DL CSH+R VYR+SS
Sbjct: 136 FIGNCSRLKAFAASSQNQEQE-LEVPYSCLLVNDIEKLDGGFHPKDLNCSHYRLVYRSSS 195

Query: 206 DVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDKVFSKGGIV 265
             +  + Y+LG+ ISFDIPDHVP+ C+EC+KP+G+CGVGLRCICH  +CKDKV S  G V
Sbjct: 196 KDDDYSEYELGSRISFDIPDHVPDICNECQKPNGNCGVGLRCICHPKECKDKVISIAGSV 255

Query: 266 RPCGKFLISLLAVFVVIIIS 281
           +  G  ++  +  F+VI +S
Sbjct: 256 KQFGNNVLISVLSFIVIFVS 272

[Close]

BLAST of Cucsa.200000 vs. TrEMBL
Match: A0A061GUL7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041497 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 9.1e-64
Identity = 133/268 (49.63%), Postives = 172/268 (64.18%), Query Frame = 1


Query: 14  QKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILCR 73
           +K+   H L SF+       +S +Q      CGK ++Q PFLS ++     PLN +I C+
Sbjct: 5   KKLNILHFLLSFVLF---FTTSTAQHTPTNHCGKIELQTPFLSQNSTISS-PLNRMIKCK 64

Query: 74  SQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLLL 133
           SQKLYFRTSIGLFPIS IDYT+KTL +S+   SSS  +VSP+LLS+G PSPPH  NSLLL
Sbjct: 65  SQKLYFRTSIGLFPISSIDYTSKTLTVSHPSCSSSQQYVSPALLSAGFPSPPHP-NSLLL 124

Query: 134 FNCSNPTKPITESAQNCPKFE---ALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKC 193
           FNCS+   P +   +NC +     A     E +     SCL+ +D+ KL   FHPNDL C
Sbjct: 125 FNCSHKRHPKSSLIRNCTRLHICGAAFEVQEPEIKVPYSCLLVQDVEKLDTDFHPNDLSC 184

Query: 194 SHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDC 253
           S +RRVYR S   E   G +LGT ISFDIPDHVP+ C+EC+KP+G+CGVGL+CICH  +C
Sbjct: 185 SDYRRVYRRSLSEEDYEGVELGTRISFDIPDHVPDICNECKKPNGNCGVGLKCICHAKEC 244

Query: 254 KDKVFSKGGIVRPCGKFLISLLAVFVVI 278
           KDKV S    +     FL  L ++ V++
Sbjct: 245 KDKVISAARSLSTGISFLFPLFSIIVLM 267

[Close]

BLAST of Cucsa.200000 vs. TAIR10
Match: AT3G44716.1 (AT3G44716.1 unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-10
Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 1


Query: 183 HPNDLKCSHFRRVYRNSSD----VELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGV 242
           +P++L      ++Y  SS     V      KL   +S ++  H+P+ C  CE+P G+CGV
Sbjct: 40  NPSELITCRSGKLYFKSSTGLFHVSGTEEVKLRARVSMEVEGHIPDLCIACERPKGNCGV 99

Query: 243 GLRCICHVLDCKDKVFSKGGIVRPCGKFLISLLAVFVVI 278
            LRC+CH  +CK+KV + G   R     L  LL + +++
Sbjct: 100 ALRCLCHPKECKNKVINFGTKSRALSGNLQQLLPLLLLL 138

HSP 2 Score: 31.6 bits (70), Expect = 9.8e-01
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 1


Query: 67 NHVILCRSQKLYFRTSIGLFPIS 90
          + +I CRS KLYF++S GLF +S
Sbjct: 42 SELITCRSGKLYFKSSTGLFHVS 64

[Close]

BLAST of Cucsa.200000 vs. NCBI nr
Match: gi|449443410|ref|XP_004139470.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus])

HSP 1 Score: 559.3 bits (1440), Expect = 3.8e-156
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1


Query: 13  MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 72
           MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 73  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 132
           RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 120

Query: 133 FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF 192
           FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF
Sbjct: 121 FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF 180

Query: 193 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK 252
           RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK
Sbjct: 181 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK 240

Query: 253 VFSKGGIVRPCGKFLISLLAVFVVIIISM 282
           VFSKGGIVRPCGKFLISLLAVFVVIIISM
Sbjct: 241 VFSKGGIVRPCGKFLISLLAVFVVIIISM 269

[Close]

BLAST of Cucsa.200000 vs. NCBI nr
Match: gi|449443412|ref|XP_004139471.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus])

HSP 1 Score: 528.5 bits (1360), Expect = 7.2e-147
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1


Query: 13  MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 72
           MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 73  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 132
           RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 120

Query: 133 FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF 192
           FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF
Sbjct: 121 FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF 180

Query: 193 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK 252
           RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK
Sbjct: 181 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK 240

Query: 253 VFSKGGIVRPC 264
           VFSKGGIVRPC
Sbjct: 241 VFSKGGIVRPC 251

[Close]

BLAST of Cucsa.200000 vs. NCBI nr
Match: gi|659071772|ref|XP_008461870.1| (PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo])

HSP 1 Score: 519.2 bits (1336), Expect = 4.4e-144
Identity = 251/269 (93.31%), Postives = 257/269 (95.54%), Query Frame = 1


Query: 13  MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 72
           MQK  SFHLLQSFLFLNFCL SSI +ENDPTSCGKFQ+QPPFLSSSNLNGPFPLNH+ILC
Sbjct: 1   MQKFLSFHLLQSFLFLNFCLGSSIPKENDPTSCGKFQLQPPFLSSSNLNGPFPLNHMILC 60

Query: 73  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 132
           RSQKLYFRTSIG+FPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL
Sbjct: 61  RSQKLYFRTSIGVFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 120

Query: 133 FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF 192
           FNCSNPTKPITESA NCPK  ALQNQDEEQ SQK SCLIFEDLGKLQESFHPNDLKCSHF
Sbjct: 121 FNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLKCSHF 180

Query: 193 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK 252
           RRVYRNSSDVELKNGYKLGTSISFDIPDHVPN CHECEKPDGHCGVGLRCICHVL+CKDK
Sbjct: 181 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLECKDK 240

Query: 253 VFSKGGIVRPCGKFLISLLAVFVVIIISM 282
           VFSKGGIVRP GK LISL+AVFVVIIISM
Sbjct: 241 VFSKGGIVRPGGKILISLMAVFVVIIISM 269

[Close]

BLAST of Cucsa.200000 vs. NCBI nr
Match: gi|255585863|ref|XP_002533606.1| (PREDICTED: uncharacterized protein LOC8276105 [Ricinus communis])

HSP 1 Score: 266.9 bits (681), Expect = 3.9e-68
Identity = 135/270 (50.00%), Postives = 179/270 (66.30%), Query Frame = 1


Query: 14  QKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILCR 73
           +K++  H L S L  N C  + +S     + CGK  IQ PFLSS++      L H+ILC 
Sbjct: 5   KKLKFIHYLLSIL--NLCFITCLSHHISTSFCGKIPIQSPFLSSNSTVSSSLLKHMILCS 64

Query: 74  SQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLLL 133
           SQKL+FRTS+GLFP+S IDY TKT+ IS     SS  FVSPSLLS+G P+ P ++NSL+L
Sbjct: 65  SQKLFFRTSLGLFPVSSIDYATKTITISQPSCPSSQQFVSPSLLSAGFPTSP-MLNSLIL 124

Query: 134 FNCSNPTKPITESAQNCPKFEALQNQDE---EQTSQKSSCLIFEDLGKLQESFHPNDLKC 193
           FNCSN   PIT S  NC  F+A  +  +   ++     SCL+  +L KL +SFHP DL C
Sbjct: 125 FNCSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLNC 184

Query: 194 SHFRRVYRNS-SDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 253
           SH+ R+YR+S +D +   GY+LGT ISFDIPDHVPN C ECEKP+G+CGVGL+CICH  +
Sbjct: 185 SHYSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPKE 244

Query: 254 CKDKVFSKGGIVRPCGKFLISLLAVFVVII 279
           CK+KV S  G ++P    +I  +   +V++
Sbjct: 245 CKNKVISTAGSIKPSANIVIFSMLPLIVLV 271

[Close]

BLAST of Cucsa.200000 vs. NCBI nr
Match: gi|743792457|ref|XP_011044555.1| (PREDICTED: uncharacterized protein LOC105139699 [Populus euphratica])

HSP 1 Score: 264.2 bits (674), Expect = 2.5e-67
Identity = 140/269 (52.04%), Postives = 177/269 (65.80%), Query Frame = 1


Query: 14  QKIQSFHLLQSFLFLNFCLCSSISQENDPTS-CGKFQIQPPFLSSSNLNGPFPLNHVILC 73
           +K+  F+ L   L +NF   SS+ Q    TS CGK QIQ PF S  N     PLN +ILC
Sbjct: 5   KKLNLFYPLLLTL-INFFFTSSLCQHTASTSFCGKIQIQTPFWSP-NSTAKSPLNRMILC 64

Query: 74  RSQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLL 133
           RSQKLYFRTS+GLFP+S I+Y +KTL IS+ + SSS H++SPSLLS+G PSPP   NSLL
Sbjct: 65  RSQKLYFRTSLGLFPVSSINYASKTLTISHSYCSSSRHYISPSLLSAGFPSPPQP-NSLL 124

Query: 134 LFNCSNPTKPITESAQNCPKFE---ALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 193
           LFNC N   P+  S  NC       A      ++     SC + +DL  L ++FHP DL 
Sbjct: 125 LFNCLNSNSPMPSSMLNCSHLNPCAASAKTQRQKLEAPYSCSLVDDLENLGKAFHPKDLN 184

Query: 194 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 253
           CSH+ +VYR S D E   GY+LGT ISFDIPDHVP+ C+EC+K +G+CGVGL+CICH  D
Sbjct: 185 CSHYSQVYRRSLDDEDYKGYELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQD 244

Query: 254 CKDKVFSKGGIVRPCGKFLISLLAVFVVI 278
           CKDKV S  G  +P    L+S+L+ FV++
Sbjct: 245 CKDKVISMAGSTKPVDSVLLSVLSFFVLV 270

The following BLAST results are available for this feature:

BLAST of Cucsa.200000 vs. TrEMBL


Match Name	E-value	Identity	Description
B9T5T7_RICCO	2.7e-68	50.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1180720 PE=4 SV=1	[more]
B9HQU1_POPTR	4.8e-65	51.29	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15040g PE=4 SV=2	[more]
W9R0T5_9ROSA	2.4e-64	49.28	Uncharacterized protein OS=Morus notabilis GN=L484_008982 PE=4 SV=1	[more]
A0A067KE41_JATCU	7.0e-64	51.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11265 PE=4 SV=1	[more]
A0A061GUL7_THECC	9.1e-64	49.63	Uncharacterized protein OS=Theobroma cacao GN=TCM_041497 PE=4 SV=1	[more]

BLAST of Cucsa.200000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44716.1	2.3e-10	33.33	unknown protein	[more]

BLAST of Cucsa.200000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443410\|ref\|XP_004139470.1\|	3.8e-156	100.00	PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus]	[more]
gi\|449443412\|ref\|XP_004139471.1\|	7.2e-147	100.00	PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus]	[more]
gi\|659071772\|ref\|XP_008461870.1\|	4.4e-144	93.31	PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo]	[more]
gi\|255585863\|ref\|XP_002533606.1\|	3.9e-68	50.00	PREDICTED: uncharacterized protein LOC8276105 [Ricinus communis]	[more]
gi\|743792457\|ref\|XP_011044555.1\|	2.5e-67	52.04	PREDICTED: uncharacterized protein LOC105139699 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.200000.1	Cucsa.200000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33355	FAMILY NOT NAMED	coord: 7..279 score: 1.3
None	No IPR available	PANTHER	PTHR33355:SF7	SUBFAMILY NOT NAMED	coord: 7..279 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.200000	Cla003533	Watermelon (97103) v1	cgywmB392
Cucsa.200000	MELO3C004786	Melon (DHL92) v3.5.1	cgymeB365
Cucsa.200000	ClCG01G012620	Watermelon (Charleston Gray)	cgywcgB370
Cucsa.200000	CSPI01G14380	Wild cucumber (PI 183967)	cgycpiB318
Cucsa.200000	CmaCh13G002830	Cucurbita maxima (Rimu)	cgycmaB0594
Cucsa.200000	CmoCh13G002960	Cucurbita moschata (Rifu)	cgycmoB0594
Cucsa.200000	Lsi03G000950	Bottle gourd (USVL1VR-Ls)	cgylsiB343
Cucsa.200000	Cp4.1LG20g07020	Cucurbita pepo (Zucchini)	cgycpeB0565
Cucsa.200000	MELO3C004786.2	Melon (DHL92) v3.6.1	cgymedB361
Cucsa.200000	CsaV3_1G014550	Cucumber (Chinese Long) v3	cgycucB322
Cucsa.200000	Cla97C01G011820	Watermelon (97103) v2	cgywmbB373
Cucsa.200000	Bhi08G000075	Wax gourd	cgywgoB422

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.200000	Cucurbita maxima (Rimu)	cgycmaB0593
Cucsa.200000	Cucurbita moschata (Rifu)	cgycmoB0593
Cucsa.200000	Cucumber (Chinese Long) v2	cgycuB305
Cucsa.200000	Cucurbita pepo (Zucchini)	cgycpeB0566