Cp4.1LG20g07020 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g07020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEcdysone receptor
LocationCp4.1LG20 : 5757573 .. 5758598 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATTCCAAAGAAGCCTCGATCAAAGAGACCACCAAAAAAGTCGATTCTCTAAGCCATAGAAACAATATCAACTTTGAAACTTCACCATTTCTCAGATCAAACACAAAAAAGATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAATCCCCTTTCTTGAGTTCTTCCAATCCATTAAGCCATATGATTCTTTGCAGATCTCACAAACTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTCCTTCTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCAAAATTTGAAGCTTTACAAAATCAAGAACAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTTATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATGTTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTTGAGTGCAGTAAGTTTCTGATTCTCTGATTTTACCATGAAAAAGCTTTAACTTTTTGATAGTTACTGCCTTTTTCTATGATTTTGCAGAAGATAAGGTGTTTTCTGAGGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTTGCTGCCTGTTTTTGTGATGATTATCTAAAGGAAACCTTGATATGCATAAAAACTTGGTTTGTTTATTTGTATTGACTTATTTCTTTTGCATTAAGTAAT

mRNA sequence

TGGATTCCAAAGAAGCCTCGATCAAAGAGACCACCAAAAAAGTCGATTCTCTAAGCCATAGAAACAATATCAACTTTGAAACTTCACCATTTCTCAGATCAAACACAAAAAAGATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAATCCCCTTTCTTGAGTTCTTCCAATCCATTAAGCCATATGATTCTTTGCAGATCTCACAAACTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTCCTTCTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCAAAATTTGAAGCTTTACAAAATCAAGAACAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTTATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATGTTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTTGAGTGCAAAGATAAGGTGTTTTCTGAGGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTTGCTGCCTGTTTTTGTGATGATTATCTAAAGGAAACCTTGATATGCATAAAAACTTGGTTTGTTTATTTGTATTGACTTATTTCTTTTGCATTAAGTAAT

Coding sequence (CDS)

ATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAATCCCCTTTCTTGAGTTCTTCCAATCCATTAAGCCATATGATTCTTTGCAGATCTCACAAACTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTCCTTCTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCAAAATTTGAAGCTTTACAAAATCAAGAACAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTTATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATGTTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTTGAGTGCAAAGATAAGGTGTTTTCTGAGGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTTGCTGCCTGTTTTTGTGATGATTATCTAA

Protein sequence

MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTKPISQNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKFLLSLLPVFVMII
Homology
[Close]
BLAST of Cp4.1LG20g07020 vs. TrEMBL
Match: B9T5T7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1180720 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-62
Identity = 135/268 (50.37%), Postives = 179/268 (66.79%), Query Frame = 1 

Query: 2   QKIQSFHLLHSVLFFNFFLCSSKTDPIS-CGKIQIQSPFLSSSNPLS-----HMILCRSH 61
           +K++  H L S+L   F  C S     S CGKI IQSPFLSS++ +S     HMILC S 
Sbjct: 5   KKLKFIHYLLSILNLCFITCLSHHISTSFCGKIPIQSPFLSSNSTVSSSLLKHMILCSSQ 64

Query: 62  KLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFH 121
           KL+FRTS+GLFP+S IDY TKT+ IS     SS  FVSP+LLS+G P+ P ++NSL+LF+
Sbjct: 65  KLFFRTSLGLFPVSSIDYATKTITISQPSCPSSQQFVSPSLLSAGFPTSP-MLNSLILFN 124

Query: 122 CSNPTKPISQ---NCPKFEALQN------QEQSQKPSCLILEDLGDLKQSFHPNDLKCSN 181
           CSN   PI+    NC  F+A  +      QE     SCL++ +L  L +SFHP DL CS+
Sbjct: 125 CSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLNCSH 184

Query: 182 FIRVYRNS-SDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECK 241
           + R+YR+S +D     GY+LGT ISFDIPDHVPN C ECEK +G+CGVGL+C+CH  ECK
Sbjct: 185 YSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPKECK 244

Query: 242 DKVFSEGGIVRPGGKFLL-SLLPVFVMI 253
           +KV S  G ++P    ++ S+LP+ V++
Sbjct: 245 NKVISTAGSIKPSANIVIFSMLPLIVLV 271

[Close]
BLAST of Cp4.1LG20g07020 vs. TrEMBL
Match: A0A061GUL7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041497 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-61
Identity = 134/268 (50.00%), Postives = 173/268 (64.55%), Query Frame = 1 

Query: 1   MQKIQSFHLLHSVLFFNFFLCSSK---TDPISCGKIQIQSPFLSS----SNPLSHMILCR 60
           MQ  +  ++LH +L F  F  +S    T    CGKI++Q+PFLS     S+PL+ MI C+
Sbjct: 1   MQTSKKLNILHFLLSFVLFFTTSTAQHTPTNHCGKIELQTPFLSQNSTISSPLNRMIKCK 60

Query: 61  SHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLL 120
           S KLYFRTSIGLFPIS IDYT+KTL +SH   SSS  +VSPALLS+G PSPP+  NSLLL
Sbjct: 61  SQKLYFRTSIGLFPISSIDYTSKTLTVSHPSCSSSQQYVSPALLSAGFPSPPHP-NSLLL 120

Query: 121 FHCSNPTKPIS---QNCPKFEALQNQEQSQKP------SCLILEDLGDLKQSFHPNDLKC 180
           F+CS+   P S   +NC +        + Q+P      SCL+++D+  L   FHPNDL C
Sbjct: 121 FNCSHKRHPKSSLIRNCTRLHICGAAFEVQEPEIKVPYSCLLVQDVEKLDTDFHPNDLSC 180

Query: 181 SNFIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVEC 240
           S++ RVYR S       G +LGT ISFDIPDHVP+ C EC+K +G+CGVGL+C+CH  EC
Sbjct: 181 SDYRRVYRRSLSEEDYEGVELGTRISFDIPDHVPDICNECKKPNGNCGVGLKCICHAKEC 240

Query: 241 KDKVFSEGGIVRPGGKFLLSLLPVFVMI 253
           KDKV S    +  G  FL  L  + V++
Sbjct: 241 KDKVISAARSLSTGISFLFPLFSIIVLM 267

[Close]
BLAST of Cp4.1LG20g07020 vs. TrEMBL
Match: W9R0T5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008982 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.5e-60
Identity = 132/276 (47.83%), Postives = 175/276 (63.41%), Query Frame = 1 

Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKT---DPIS--CGKIQIQSPFLSSSN----PLSHMIL 60
           M+  + FHLLH  L      CS+ +   D ++  CG+I IQ PF   ++    PL+HM+L
Sbjct: 1   MRAFKEFHLLHLFLLIILIFCSATSCAEDALTRTCGQIPIQEPFSIQTHNLSIPLNHMLL 60

Query: 61  CRSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSL 120
           C+  KLY+RTS+GLFPIS I+YTTK   ISH   S S H+VSP LLS+G P+PP   NSL
Sbjct: 61  CKYQKLYYRTSLGLFPISSINYTTKVFTISHPSCSHSLHYVSPLLLSAGFPTPPQP-NSL 120

Query: 121 LLFHCSNPTKPIS---------QNC---PKFEALQNQEQSQKPSCLILEDLGDLKQSFHP 180
           LLF+CSN  K +S         Q C   PK   ++  E+    +CL+++ +  L  SFHP
Sbjct: 121 LLFNCSNGKKNLSPFIRNHTCSQTCRPSPKIR-VKEVEEGFSANCLLIDHVEKLDMSFHP 180

Query: 181 NDLKCSNFIRVYR--NSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRC 240
            DL CS++ R YR  +S D G   G++LGT ISFDIPDH PN C ECEK +G+CGVGLRC
Sbjct: 181 RDLNCSHYRRFYRVESSDDDGEFEGFELGTRISFDIPDHAPNVCSECEKPNGNCGVGLRC 240

Query: 241 LCHVVECKDKVFSEGGIVRPGGKFLLSLLPVFVMII 254
           +CH  ECKDKV S+GG +   G  L+SL+   V+++
Sbjct: 241 ICHAKECKDKVVSKGGSINGFGNVLVSLVCFLVVMV 274

[Close]
BLAST of Cp4.1LG20g07020 vs. TrEMBL
Match: B9HQU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15040g PE=4 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 5.5e-60
Identity = 127/251 (50.60%), Postives = 164/251 (65.34%), Query Frame = 1 

Query: 15  FFNFFLCSSKTDPISCGKIQIQSPFLS----SSNPLSHMILCRSHKLYFRTSIGLFPISQ 74
           FF   LC        CGKIQIQ+PF S    + +PL+ MILCRS KLYFRTS+GLFP+S 
Sbjct: 21  FFTSSLCQHTASTSFCGKIQIQTPFWSPNSTAKSPLNRMILCRSQKLYFRTSLGLFPVSS 80

Query: 75  IDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTKPISQ---NC 134
           I+Y +KTL ISH   SSS H++SP+LLS+G P+PP   NSLLL +C N   P+     NC
Sbjct: 81  INYASKTLTISHSSCSSSRHYISPSLLSAGFPTPPQP-NSLLLLNCLNSNSPMPSSMLNC 140

Query: 135 PKFE--ALQNQEQSQK---PSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGLRNG 194
                 A   + Q QK   P    L  L +L ++FHP DL CS++ +VYR S D     G
Sbjct: 141 SHLNPCAASAKTQRQKLEAPHSCSLVGLENLDKAFHPKDLNCSHYSQVYRRSLDDEDYKG 200

Query: 195 YKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKFL 254
           Y+LGT ISFDIPDHVP+ C EC+K++G+CGVGL+C+CH  +C+DKV S  G  +P G  L
Sbjct: 201 YELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQDCRDKVISMAGSTKPVGNVL 260

[Close]
BLAST of Cp4.1LG20g07020 vs. TrEMBL
Match: A0A0D2S0U1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G110000 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 7.2e-60
Identity = 132/261 (50.57%), Postives = 169/261 (64.75%), Query Frame = 1 

Query: 3   KIQSFHLLHSVLFFNFFLCSSKTDP-ISCGKIQIQSPFLSSSN----PLSHMILCRSHKL 62
           K+Q   L H +LF      + KT P + CG +Q+Q+PFL+ ++    PL+ M  C+S KL
Sbjct: 12  KLQYLLLSHMLLFTTS--TALKTAPTLRCGNLQLQTPFLAQNSTNFSPLNLMTRCKSQKL 71

Query: 63  YFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCS 122
           YFRTS+GLFPIS IDYT+KTLI+SH   SSS HFVSPALLS+G PSPP L NSLLLF+CS
Sbjct: 72  YFRTSLGLFPISSIDYTSKTLIVSHTSCSSSEHFVSPALLSAGFPSPP-LPNSLLLFNCS 131

Query: 123 NPTKPIS----QNCPKFEAL-QNQEQSQKP-SCLILEDLGDLKQSFHPNDLKCSNFIRVY 182
           + T P +     NC +F    +   + Q P SCL+++D+  L   FHP DL CS + RVY
Sbjct: 132 HKTHPTAASFIHNCTRFHMCGEAASEVQLPFSCLVVKDIEKLDPGFHPKDLSCSGYRRVY 191

Query: 183 RNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSE 242
           R S       G  LGT ISFDIPDHVP+ C EC+K +G+CGVGL+C+CH  +CKDKV S 
Sbjct: 192 RRSLSEEDYEGVDLGTRISFDIPDHVPDMCNECKKPNGNCGVGLKCICHAKDCKDKVLSA 251

Query: 243 GGIVRPGGKFLLSLLPVFVMI 253
              +  G  FL  L  + V +
Sbjct: 252 ATSLDTGISFLFPLFSIIVQM 269

[Close]
BLAST of Cp4.1LG20g07020 vs. TAIR10
Match: AT3G44716.1 (AT3G44716.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 1 

Query: 184 KLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKFLL 243
           KL   +S ++  H+P+ C  CE+  G+CGV LRCLCH  ECK+KV + G   R     L 
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFGTKSRALSGNLQ 129

Query: 244 SLLPVFVMI 253
            LLP+ +++
Sbjct: 130 QLLPLLLLL 138

[Close]
BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: gi|449443410|ref|XP_004139470.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 4.9e-110
Identity = 209/267 (78.28%), Postives = 230/267 (86.14%), Query Frame = 1 

Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQSPFLSSSN-----PLSHMILC 60
           MQKIQSFHLL S LF NF LCSS   + DP SCGK QIQ PFLSSSN     PL+H+ILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 61  RSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLL 120
           RS KLYFRTSIGLFPIS+IDYTTKTLIIS+  SSS  HFVSP+LLSSGLPSPP+LINSLL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSH-HFVSPSLLSSGLPSPPHLINSLL 120

Query: 121 LFHCSNPTKPIS---QNCPKFEALQNQEQ---SQKPSCLILEDLGDLKQSFHPNDLKCSN 180
           LF+CSNPTKPI+   QNCPKFEALQNQ++   SQK SCLI EDLG L++SFHPNDLKCS+
Sbjct: 121 LFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSH 180

Query: 181 FIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKD 240
           F RVYRNSSD  L+NGYKLGTSISFDIPDHVPNPC ECEK DGHCGVGLRC+CHV++CKD
Sbjct: 181 FRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKD 240

Query: 241 KVFSEGGIVRPGGKFLLSLLPVFVMII 254
           KVFS+GGIVRP GKFL+SLL VFV+II
Sbjct: 241 KVFSKGGIVRPCGKFLISLLAVFVVII 266

[Close]
BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: gi|659071772|ref|XP_008461870.1| (PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-104
Identity = 201/267 (75.28%), Postives = 224/267 (83.90%), Query Frame = 1 

Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQSPFLSSSN-----PLSHMILC 60
           MQK  SFHLL S LF NF L SS   + DP SCGK Q+Q PFLSSSN     PL+HMILC
Sbjct: 1   MQKFLSFHLLQSFLFLNFCLGSSIPKENDPTSCGKFQLQPPFLSSSNLNGPFPLNHMILC 60

Query: 61  RSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLL 120
           RS KLYFRTSIG+FPIS+IDYTTKTLIIS+  SSS  HFVSP+LLSSGLPSPP+LINSLL
Sbjct: 61  RSQKLYFRTSIGVFPISKIDYTTKTLIISNFLSSSH-HFVSPSLLSSGLPSPPHLINSLL 120

Query: 121 LFHCSNPTKPISQ---NCPKFEALQNQEQ---SQKPSCLILEDLGDLKQSFHPNDLKCSN 180
           LF+CSNPTKPI++   NCPK  ALQNQ++   SQK SCLI EDLG L++SFHPNDLKCS+
Sbjct: 121 LFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLKCSH 180

Query: 181 FIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKD 240
           F RVYRNSSD  L+NGYKLGTSISFDIPDHVPN C ECEK DGHCGVGLRC+CHV+ECKD
Sbjct: 181 FRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLECKD 240

Query: 241 KVFSEGGIVRPGGKFLLSLLPVFVMII 254
           KVFS+GGIVRPGGK L+SL+ VFV+II
Sbjct: 241 KVFSKGGIVRPGGKILISLMAVFVVII 266

[Close]
BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: gi|449443412|ref|XP_004139471.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 3.1e-104
Identity = 197/251 (78.49%), Postives = 216/251 (86.06%), Query Frame = 1 

Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQSPFLSSSN-----PLSHMILC 60
           MQKIQSFHLL S LF NF LCSS   + DP SCGK QIQ PFLSSSN     PL+H+ILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 61  RSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLL 120
           RS KLYFRTSIGLFPIS+IDYTTKTLIIS+  SSS  HFVSP+LLSSGLPSPP+LINSLL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSH-HFVSPSLLSSGLPSPPHLINSLL 120

Query: 121 LFHCSNPTKPIS---QNCPKFEALQNQEQ---SQKPSCLILEDLGDLKQSFHPNDLKCSN 180
           LF+CSNPTKPI+   QNCPKFEALQNQ++   SQK SCLI EDLG L++SFHPNDLKCS+
Sbjct: 121 LFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSH 180

Query: 181 FIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKD 238
           F RVYRNSSD  L+NGYKLGTSISFDIPDHVPNPC ECEK DGHCGVGLRC+CHV++CKD
Sbjct: 181 FRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKD 240

[Close]
BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: gi|255585863|ref|XP_002533606.1| (PREDICTED: uncharacterized protein LOC8276105 [Ricinus communis])

HSP 1 Score: 248.1 bits (632), Expect = 1.7e-62
Identity = 135/268 (50.37%), Postives = 179/268 (66.79%), Query Frame = 1 

Query: 2   QKIQSFHLLHSVLFFNFFLCSSKTDPIS-CGKIQIQSPFLSSSNPLS-----HMILCRSH 61
           +K++  H L S+L   F  C S     S CGKI IQSPFLSS++ +S     HMILC S 
Sbjct: 5   KKLKFIHYLLSILNLCFITCLSHHISTSFCGKIPIQSPFLSSNSTVSSSLLKHMILCSSQ 64

Query: 62  KLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFH 121
           KL+FRTS+GLFP+S IDY TKT+ IS     SS  FVSP+LLS+G P+ P ++NSL+LF+
Sbjct: 65  KLFFRTSLGLFPVSSIDYATKTITISQPSCPSSQQFVSPSLLSAGFPTSP-MLNSLILFN 124

Query: 122 CSNPTKPISQ---NCPKFEALQN------QEQSQKPSCLILEDLGDLKQSFHPNDLKCSN 181
           CSN   PI+    NC  F+A  +      QE     SCL++ +L  L +SFHP DL CS+
Sbjct: 125 CSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLNCSH 184

Query: 182 FIRVYRNS-SDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECK 241
           + R+YR+S +D     GY+LGT ISFDIPDHVPN C ECEK +G+CGVGL+C+CH  ECK
Sbjct: 185 YSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPKECK 244

Query: 242 DKVFSEGGIVRPGGKFLL-SLLPVFVMI 253
           +KV S  G ++P    ++ S+LP+ V++
Sbjct: 245 NKVISTAGSIKPSANIVIFSMLPLIVLV 271

[Close]
BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: gi|743792457|ref|XP_011044555.1| (PREDICTED: uncharacterized protein LOC105139699 [Populus euphratica])

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-62
Identity = 127/251 (50.60%), Postives = 165/251 (65.74%), Query Frame = 1 

Query: 15  FFNFFLCSSKTDPISCGKIQIQSPFLS----SSNPLSHMILCRSHKLYFRTSIGLFPISQ 74
           FF   LC        CGKIQIQ+PF S    + +PL+ MILCRS KLYFRTS+GLFP+S 
Sbjct: 21  FFTSSLCQHTASTSFCGKIQIQTPFWSPNSTAKSPLNRMILCRSQKLYFRTSLGLFPVSS 80

Query: 75  IDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTKPISQN---- 134
           I+Y +KTL ISH   SSS H++SP+LLS+G PSPP   NSLLLF+C N   P+  +    
Sbjct: 81  INYASKTLTISHSYCSSSRHYISPSLLSAGFPSPPQP-NSLLLFNCLNSNSPMPSSMLNC 140

Query: 135 -----CPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGLRN 194
                C      Q Q+     SC +++DL +L ++FHP DL CS++ +VYR S D     
Sbjct: 141 SHLNPCAASAKTQRQKLEAPYSCSLVDDLENLGKAFHPKDLNCSHYSQVYRRSLDDEDYK 200

Query: 195 GYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKF 253
           GY+LGT ISFDIPDHVP+ C EC+K++G+CGVGL+C+CH  +CKDKV S  G  +P    
Sbjct: 201 GYELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQDCKDKVISMAGSTKPVDSV 260

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g07020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG20g07020 vs. TrEMBL
Match NameE-valueIdentityDescription
B9T5T7_RICCO1.2e-6250.37Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1180720 PE=4 SV=1[more]
A0A061GUL7_THECC1.7e-6150.00Uncharacterized protein OS=Theobroma cacao GN=TCM_041497 PE=4 SV=1[more]
W9R0T5_9ROSA5.5e-6047.83Uncharacterized protein OS=Morus notabilis GN=L484_008982 PE=4 SV=1[more]
B9HQU1_POPTR5.5e-6050.60Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15040g PE=4 SV=2[more]
A0A0D2S0U1_GOSRA7.2e-6050.57Uncharacterized protein OS=Gossypium raimondii GN=B456_006G110000 PE=4 SV=1[more]
BLAST of Cp4.1LG20g07020 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G44716.11.9e-1142.03 unknown protein[more]
BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443410|ref|XP_004139470.1|4.9e-11078.28PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus][more]
gi|659071772|ref|XP_008461870.1|1.4e-10475.28PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo][more]
gi|449443412|ref|XP_004139471.1|3.1e-10478.49PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus][more]
gi|255585863|ref|XP_002533606.1|1.7e-6250.37PREDICTED: uncharacterized protein LOC8276105 [Ricinus communis][more]
gi|743792457|ref|XP_011044555.1|2.9e-6250.60PREDICTED: uncharacterized protein LOC105139699 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g07020.1Cp4.1LG20g07020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33355FAMILY NOT NAMEDcoord: 1..253
score: 2.4
NoneNo IPR availablePANTHERPTHR33355:SF7SUBFAMILY NOT NAMEDcoord: 1..253
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g07020Cucsa.200000Cucumber (Gy14) v1cgycpeB0565
Cp4.1LG20g07020CmaCh13G002830Cucurbita maxima (Rimu)cmacpeB233
Cp4.1LG20g07020CmoCh13G002960Cucurbita moschata (Rifu)cmocpeB200
Cp4.1LG20g07020Cla003533Watermelon (97103) v1cpewmB518
Cp4.1LG20g07020ClCG01G012620Watermelon (Charleston Gray)cpewcgB459
Cp4.1LG20g07020CSPI01G14380Wild cucumber (PI 183967)cpecpiB513
Cp4.1LG20g07020Lsi03G000950Bottle gourd (USVL1VR-Ls)cpelsiB429
Cp4.1LG20g07020MELO3C004786.2Melon (DHL92) v3.6.1cpemedB557
Cp4.1LG20g07020CsaV3_1G014550Cucumber (Chinese Long) v3cpecucB0631
Cp4.1LG20g07020Bhi08G000075Wax gourdcpewgoB0660
Cp4.1LG20g07020CsGy1G014310Cucumber (Gy14) v2cgybcpeB076
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g07020Cucurbita maxima (Rimu)cmacpeB189
Cp4.1LG20g07020Cucurbita maxima (Rimu)cmacpeB236
Cp4.1LG20g07020Cucurbita moschata (Rifu)cmocpeB165
Cp4.1LG20g07020Cucurbita moschata (Rifu)cmocpeB203
Cp4.1LG20g07020Cucurbita moschata (Rifu)cmocpeB204
Cp4.1LG20g07020Wild cucumber (PI 183967)cpecpiB518
Cp4.1LG20g07020Cucumber (Chinese Long) v2cpecuB516
Cp4.1LG20g07020Bottle gourd (USVL1VR-Ls)cpelsiB428
Cp4.1LG20g07020Watermelon (Charleston Gray)cpewcgB453
Cp4.1LG20g07020Melon (DHL92) v3.5.1cpemeB480
Cp4.1LG20g07020Cucumber (Gy14) v2cgybcpeB082
Cp4.1LG20g07020Melon (DHL92) v3.6.1cpemedB563
Cp4.1LG20g07020Silver-seed gourdcarcpeB1278
Cp4.1LG20g07020Cucumber (Chinese Long) v3cpecucB0635
Cp4.1LG20g07020Wax gourdcpewgoB0636