Lsi03G000950.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCTTTTCTGTTCCTGAATTTCTGCTTGGGTTCTTCCATTTCTCAGAGAACTGACCCAACTTCTTGTGGTAAAATCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAACTAGGTCCTTCCCATTAAACCATATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAACTTGATTACACCACAAAAACTCTCATAATCTCTCATTTTCCTTATTCTTCTTCTTCAAACCATTTTGTTTCCCCTTCCCTTCTATTCTCAGGCCTTCCTTCTCCACCAGACCTCATCAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAATCCCATCTCTGAATCTATCCAAAACTGCCCAAAATTTGAAGCTTTACAAAAGCAAGATGAAAAAGAAATGTCCCAAAAAACATCTTGTTTGATCTTTGAGGATCTTGGAAAGCTGAAGGAGAGCTTCCATCCTAACGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCTTCAGACTTTGACCTAAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCCTGTAATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGAGTGCAGTATGTTTCTGATTCTCTAATCTTACAAAGTTAATTTTTACTTGTTGACATTTGATTTGAGACTCATGATATTTACTGCTTCTTCTATGATTATGCAGAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTGTATTTCTCCTTTCCTTGCTGGCTGTTTTTGTGATGATCATTTTGTCTATGTAATGGATGTTTAATCTAAAAGAAACTCTTCTCATTCGATGATATACATAAAATCTGGCTTGGTTTATTTGTGTTG ATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCTTTTCTGTTCCTGAATTTCTGCTTGGGTTCTTCCATTTCTCAGAGAACTGACCCAACTTCTTGTGGTAAAATCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAACTAGGTCCTTCCCATTAAACCATATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAACTTGATTACACCACAAAAACTCTCATAATCTCTCATTTTCCTTATTCTTCTTCTTCAAACCATTTTGTTTCCCCTTCCCTTCTATTCTCAGGCCTTCCTTCTCCACCAGACCTCATCAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAATCCCATCTCTGAATCTATCCAAAACTGCCCAAAATTTGAAGCTTTACAAAAGCAAGATGAAAAAGAAATGTCCCAAAAAACATCTTGTTTGATCTTTGAGGATCTTGGAAAGCTGAAGGAGAGCTTCCATCCTAACGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCTTCAGACTTTGACCTAAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCCTGTAATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGAGTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTGTATTTCTCCTTTCCTTGCTGGCTGTTTTTGTGATGATCATTTTGTCTATGTAATGGATGTTTAATCTAAAAGAAACTCTTCTCATTCGATGATATACATAAAATCTGGCTTGGTTTATTTGTGTTG ATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCTTTTCTGTTCCTGAATTTCTGCTTGGGTTCTTCCATTTCTCAGAGAACTGACCCAACTTCTTGTGGTAAAATCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAACTAGGTCCTTCCCATTAAACCATATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAACTTGATTACACCACAAAAACTCTCATAATCTCTCATTTTCCTTATTCTTCTTCTTCAAACCATTTTGTTTCCCCTTCCCTTCTATTCTCAGGCCTTCCTTCTCCACCAGACCTCATCAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAATCCCATCTCTGAATCTATCCAAAACTGCCCAAAATTTGAAGCTTTACAAAAGCAAGATGAAAAAGAAATGTCCCAAAAAACATCTTGTTTGATCTTTGAGGATCTTGGAAAGCTGAAGGAGAGCTTCCATCCTAACGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCTTCAGACTTTGACCTAAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCCTGTAATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGAGTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTGTATTTCTCCTTTCCTTGCTGGCTGTTTTTGTGATGATCATTTTGTCTATGTAA MQKIQSFHLLQSFLFLNFCLGSSISQRTDPTSCGKIQIQPPFLSSSNLTRSFPLNHMILCRSQKLYFRTSIGLFPISKLDYTTKTLIISHFPYSSSSNHFVSPSLLFSGLPSPPDLINSLLLFHCSNPTNPISESIQNCPKFEALQKQDEKEMSQKTSCLIFEDLGKLKESFHPNDLKCSHFRRVYRNSSDFDLKNGYKLGTSISFDIPDHVPNPCNECEKPDGHCGVGLRCICHVLECKDKVFSKGGIVRPGGVFLLSLLAVFVMIILSM
BLAST of Lsi03G000950.1 vs. TrEMBL
Match: B9T5T7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1180720 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 2.0e-68 Identity = 139/274 (50.73%), Postives = 185/274 (67.52%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. TrEMBL
Match: A0A061GUL7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041497 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 8.5e-67 Identity = 142/269 (52.79%), Postives = 179/269 (66.54%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. TrEMBL
Match: A0A067KE41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11265 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.2e-66 Identity = 141/260 (54.23%), Postives = 178/260 (68.46%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. TrEMBL
Match: A0A068UFJ7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024038001 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.3e-64 Identity = 136/274 (49.64%), Postives = 179/274 (65.33%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. TrEMBL
Match: B9HQU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15040g PE=4 SV=2) HSP 1 Score: 253.1 bits (645), Expect = 3.9e-64 Identity = 139/271 (51.29%), Postives = 183/271 (67.53%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. TAIR10
Match: AT3G44716.1 (AT3G44716.1 unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 3.8e-10 Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. NCBI nr
Match: gi|449443410|ref|XP_004139470.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus]) HSP 1 Score: 477.2 bits (1227), Expect = 1.8e-131 Identity = 236/271 (87.08%), Postives = 252/271 (92.99%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. NCBI nr
Match: gi|659071772|ref|XP_008461870.1| (PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo]) HSP 1 Score: 463.8 bits (1192), Expect = 2.1e-127 Identity = 228/271 (84.13%), Postives = 246/271 (90.77%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. NCBI nr
Match: gi|449443412|ref|XP_004139471.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus]) HSP 1 Score: 457.2 bits (1175), Expect = 2.0e-125 Identity = 222/252 (88.10%), Postives = 235/252 (93.25%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. NCBI nr
Match: gi|255585863|ref|XP_002533606.1| (PREDICTED: uncharacterized protein LOC8276105 [Ricinus communis]) HSP 1 Score: 267.3 bits (682), Expect = 2.9e-68 Identity = 139/274 (50.73%), Postives = 185/274 (67.52%), Query Frame = 1
BLAST of Lsi03G000950.1 vs. NCBI nr
Match: gi|743792457|ref|XP_011044555.1| (PREDICTED: uncharacterized protein LOC105139699 [Populus euphratica]) HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68 Identity = 143/270 (52.96%), Postives = 185/270 (68.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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