Lsi03G000760 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G000760
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr03 : 1063862 .. 1065343 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCCATTTTCTCAGCAACTTTAGTCTCTTCCATTCTTGTGAAAGGAAATGGAGGAATTGGCTGCCAGACTATGATGGCTCATTTCAAGACCTACTCTAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGAACAAGCTTCCTCCTGACCCCGCCGTCAACCAATTCTTGAACAATAAAACCTCTGCCCCTTCCCCATTTACCGATTTGATTTCCTCGGAGACTTTCCAACTCCCCGAAGGTGAAGACGATGAGCATGAAGAAATCCACGCTTATGACTGTAGGGATAATGGTGTTGTTTGGGATTCAGAAGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATTCCTCAGAAACCTGGTAAATTGAATCGGGACAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAGGACTTCCTAACCCTAAAATTCGCCCAAGAGTAGTGGTTTCTTCGCGTGCTTTGCTGTCTAAGCAAGTCTACAAGTGTCCTGATTTTCTTATTGGCCTTGCCAGGGAGATTAGATATCTGTCCCCGGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCTTTTTTGCAGAAGGGCTCTCTGTCATTGACGATCAAGGAACTGGGTCGTATGGGTCTTCCTGATAGAGCTCTAAAGACATTCTGTTGGGCACAGGAACAACCTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTGCAAGGAACCATGAACTGAAGGTACCTCTAAACTTGGAAGAGTTCACTAAACTTGCTAGTCGTGGTGTGCTCGAGGCAATGGTGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTTCGAAGAAGGGCAAGAGAATGTTGGATCCCAGCGTTTATGTGAAGTTGATATTGGAGCTTGGGAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGATGAGCTAGGACAAAGAGAAGCCTTGAAGTTAAACCAGCAAGATACTACAGCTATAATTAAGGCCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCTAGTGTGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAAGAAATACAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGGCTGCAAACTGTCCTTTTGATCTTCCTGCTTATTGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTGCCCCAACGTATGATGTATATAGGAATCTGATTACCATATATTTAGTTTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTACAAGGAAGCAGAGAATGCTGGATTTGTCATGGATAAACAAATTACTTCAATGCTGTTGCAAGCAAAAAGATGA

mRNA sequence

ATGGACTCCATTTTCTCAGCAACTTTAGTCTCTTCCATTCTTGTGAAAGGAAATGGAGGAATTGGCTGCCAGACTATGATGGCTCATTTCAAGACCTACTCTAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGAACAAGCTTCCTCCTGACCCCGCCGTCAACCAATTCTTGAACAATAAAACCTCTGCCCCTTCCCCATTTACCGATTTGATTTCCTCGGAGACTTTCCAACTCCCCGAAGGTGAAGACGATGAGCATGAAGAAATCCACGCTTATGACTGTAGGGATAATGGTGTTGTTTGGGATTCAGAAGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATTCCTCAGAAACCTGGTAAATTGAATCGGGACAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAGGACTTCCTAACCCTAAAATTCGCCCAAGAGTAGTGGTTTCTTCGCGTGCTTTGCTGTCTAAGCAAGTCTACAAGTGTCCTGATTTTCTTATTGGCCTTGCCAGGGAGATTAGATATCTGTCCCCGGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCTTTTTTGCAGAAGGGCTCTCTGTCATTGACGATCAAGGAACTGGGTCGTATGGGTCTTCCTGATAGAGCTCTAAAGACATTCTGTTGGGCACAGGAACAACCTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTGCAAGGAACCATGAACTGAAGGTACCTCTAAACTTGGAAGAGTTCACTAAACTTGCTAGTCGTGGTGTGCTCGAGGCAATGGTGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTTCGAAGAAGGGCAAGAGAATGTTGGATCCCAGCGTTTATGTGAAGTTGATATTGGAGCTTGGGAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGATGAGCTAGGACAAAGAGAAGCCTTGAAGTTAAACCAGCAAGATACTACAGCTATAATTAAGGCCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCTAGTGTGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAAGAAATACAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGGCTGCAAACTGTCCTTTTGATCTTCCTGCTTATTGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTGCCCCAACGTATGATGTATATAGGAATCTGATTACCATATATTTAGTTTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTACAAGGAAGCAGAGAATGCTGGATTTGTCATGGATAAACAAATTACTTCAATGCTGTTGCAAGCAAAAAGATGA

Coding sequence (CDS)

ATGGACTCCATTTTCTCAGCAACTTTAGTCTCTTCCATTCTTGTGAAAGGAAATGGAGGAATTGGCTGCCAGACTATGATGGCTCATTTCAAGACCTACTCTAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGAACAAGCTTCCTCCTGACCCCGCCGTCAACCAATTCTTGAACAATAAAACCTCTGCCCCTTCCCCATTTACCGATTTGATTTCCTCGGAGACTTTCCAACTCCCCGAAGGTGAAGACGATGAGCATGAAGAAATCCACGCTTATGACTGTAGGGATAATGGTGTTGTTTGGGATTCAGAAGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATTCCTCAGAAACCTGGTAAATTGAATCGGGACAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAGGACTTCCTAACCCTAAAATTCGCCCAAGAGTAGTGGTTTCTTCGCGTGCTTTGCTGTCTAAGCAAGTCTACAAGTGTCCTGATTTTCTTATTGGCCTTGCCAGGGAGATTAGATATCTGTCCCCGGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCTTTTTTGCAGAAGGGCTCTCTGTCATTGACGATCAAGGAACTGGGTCGTATGGGTCTTCCTGATAGAGCTCTAAAGACATTCTGTTGGGCACAGGAACAACCTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTGCAAGGAACCATGAACTGAAGGTACCTCTAAACTTGGAAGAGTTCACTAAACTTGCTAGTCGTGGTGTGCTCGAGGCAATGGTGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTTCGAAGAAGGGCAAGAGAATGTTGGATCCCAGCGTTTATGTGAAGTTGATATTGGAGCTTGGGAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGATGAGCTAGGACAAAGAGAAGCCTTGAAGTTAAACCAGCAAGATACTACAGCTATAATTAAGGCCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCTAGTGTGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAAGAAATACAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGGCTGCAAACTGTCCTTTTGATCTTCCTGCTTATTGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTGCCCCAACGTATGATGTATATAGGAATCTGATTACCATATATTTAGTTTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTACAAGGAAGCAGAGAATGCTGGATTTGTCATGGATAAACAAATTACTTCAATGCTGTTGCAAGCAAAAAGATGA

Protein sequence

MDSIFSATLVSSILVKGNGGIGCQTMMAHFKTYSRRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSETFQLPEGEDDEHEEIHAYDCRDNGVVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLPHKLRPPGLPNPKIRPRVVVSSRALLSKQVYKCPDFLIGLAREIRYLSPEENVSKVLNRWGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHELKVPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR
Homology
[Close]
BLAST of Lsi03G000760 vs. Swiss-Prot
Match: PP142_ARATH (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN=EMB975 PE=2 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 7.9e-141
Identity = 271/478 (56.69%), Postives = 349/478 (73.01%), Query Frame = 1 

Query: 19  GGIGCQTMMAHFKTYSRRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSET 78
           G IG   + A  + +S++   KNL  PRR KLPPD  VN FL      P     +I  + 
Sbjct: 23  GNIGVTRVNASQRNHSKKLT-KNLRNPRRTKLPPDFGVNLFLRKPKIEPL----VIDDDD 82

Query: 79  FQLPEGEDDEHEEIHAYDCRDNGVVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLP 138
            Q+ E  +D+          D+ VVW+ EEIEAISSLFQ RIPQKP K +R RPLPLP P
Sbjct: 83  EQVQESVNDD----------DDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQP 142

Query: 139 HKLRPPGLPNPKIRPRVVVSSRAL--LSKQVYKCPDFLIGLAREIRYL-SPEENVSKVLN 198
           HKLRP GLP PK   + ++ S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN
Sbjct: 143 HKLRPLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLN 202

Query: 199 RWGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHEL 258
           +W  FL+KGSLS TI+ELG MGLP+RAL+T+ WA++   L PD+R+LAST++VLA++HEL
Sbjct: 203 KWVSFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHEL 262

Query: 259 KVPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILEL 318
           K+   L+    LAS+ V+EAM++G I+GG LNLA KL++ SK   R+LD SVYVK+ILE+
Sbjct: 263 KL---LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEI 322

Query: 319 GKNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEP 378
            KNPDK  LV+ LL+EL +RE LKL+QQD T+I+K C +LG+FE+ E L+ W+  S  EP
Sbjct: 323 AKNPDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREP 382

Query: 379 SVVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYF 438
           SVVMYT ++HSRYS++KYREA+S+VWEME +NC  DLPAY VVIKLFVAL DL RA+RY+
Sbjct: 383 SVVMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYY 442

Query: 439 AKLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           +KLKEAGF+PTYD+YR++I++Y  SGRL KCKEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 SKLKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]
BLAST of Lsi03G000760 vs. Swiss-Prot
Match: PP194_ARATH (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.3e-12
Identity = 51/206 (24.76%), Postives = 91/206 (44.17%), Query Frame = 1 

Query: 276 MVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLDELGQR 335
           ++ GF K      AW ++          +  +Y  +I  L K   +      +L  L + 
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK-VGQTSKAKEMLQNLIKE 584

Query: 336 EALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYRE 395
           +   ++     +II    ++G  + A + Y    E+G  P+VV +T+L++      +   
Sbjct: 585 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 644

Query: 396 ALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLIT 455
           AL +  EM++     DLPAY  +I  F    D+  A   F++L E G  P   VY +LI+
Sbjct: 645 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 704

Query: 456 IYLVSGRLAKCKEIYKEAENAGFVMD 482
            +   G++    ++YK+  N G   D
Sbjct: 705 GFRNLGKMDAAIDLYKKMVNDGISCD 729

[Close]
BLAST of Lsi03G000760 vs. Swiss-Prot
Match: PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 8.5e-10
Identity = 36/124 (29.03%), Postives = 61/124 (49.19%), Query Frame = 1 

Query: 346 TAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEA 405
           T ++      G+   A+ ++    E+GH PS++ YT L+ +    K+Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 406 ANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAK 465
           +    D   +  VI  F   G++  AV+   K+KE G  PT   Y  LI  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 466 CKEI 470
             E+
Sbjct: 169 SSEL 172

[Close]
BLAST of Lsi03G000760 vs. Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.2e-09
Identity = 35/123 (28.46%), Postives = 63/123 (51.22%), Query Frame = 1 

Query: 346 TAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEA 405
           T ++      G+ + A  +++  +E GH+PS++ YT LV +    K +   LSL+ ++E 
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382

Query: 406 ANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAK 465
                D   +  +I      G+L +A++ F K+KE+G  PT   +  LI  Y   G++ K
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY---GKIGK 442

Query: 466 CKE 469
            +E
Sbjct: 443 LEE 442

[Close]
BLAST of Lsi03G000760 vs. Swiss-Prot
Match: PP186_ARATH (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.5e-09
Identity = 58/220 (26.36%), Postives = 97/220 (44.09%), Query Frame = 1 

Query: 272 VLEAMVRGFIKG-GSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLD 331
           V  A + G +K  G+   A  +    K+ +       Y  L++ L     K+ +   L  
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY-NLMINLYGKASKSYMSWKLYC 289

Query: 332 ELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSD 391
           E+   +  K N    TA++ A  R G  E AE+++    E G EP V +Y AL+ S YS 
Sbjct: 290 EMRSHQC-KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES-YSR 349

Query: 392 KKYREALSLVWE-MEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDV 451
             Y    + ++  M+   C  D  +Y +++  +   G  S A   F ++K  G APT   
Sbjct: 350 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 409

Query: 452 YRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLL 490
           +  L++ Y  +  + KC+ I KE    G   D  + + +L
Sbjct: 410 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446

[Close]
BLAST of Lsi03G000760 vs. TrEMBL
Match: A0A0A0LVM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1)

HSP 1 Score: 862.1 bits (2226), Expect = 3.4e-247
Identity = 439/495 (88.69%), Postives = 460/495 (92.93%), Query Frame = 1 

Query: 1   MDSIFSATLVSSILVKGNGGIGCQTMMAHFKTYSRRRPPKNLLCPRRNKLPPDPAVNQFL 60
           MDSI SAT VSSILVKGNGGIGCQ  M HFK  SRRRPPKNLLCPRR KLPP+PAVNQF 
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSP-FTDLISSETFQLPEGEDDEHEEIHAYD-CRDNGVVWDSEEIEAISSLFQG 120
           NNKTSAPSP FTDLISS+ FQ      DEHEEIHA+D  +D  VVWDS+EIEAISSLFQG
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQ------DEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQG 120

Query: 121 RIPQKPGKLNRDRPLPLPLPHKLRPPGLPNPKIRPRVVVSSRALLSKQVYKCPDFLIGLA 180
           RIPQKPGKLNR+RPLPLPLPHKLRPP LPNPKIRP  VVSSRALLSKQVYK PDFLIGLA
Sbjct: 121 RIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLA 180

Query: 181 REIRYLSPEENVSKVLNRWGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPD 240
           REIR LSPEENVSKVLNRWGPFLQKGSLSLTIKELG MGLPDRAL TFCWAQEQ RLFPD
Sbjct: 181 REIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPD 240

Query: 241 DRVLASTVEVLARNHELKVPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKK 300
           DRVLASTVEVL+RNHELKV +NLEEFTKLASRGVLEAM+RGFI+GGSLNLAWKLLVA+KK
Sbjct: 241 DRVLASTVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKK 300

Query: 301 GKRMLDPSVYVKLILELGKNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKF 360
           GKRMLDPSVYVKLILELGKNPDKN+LVLTLL+ELGQREALKLNQQD T I+K CTRLGKF
Sbjct: 301 GKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKF 360

Query: 361 EIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVV 420
           EIAEKLYSWYVESGHEPS+VMYTALVHSRYSD+KYREALSLVWEME+ NCPFDLPAY VV
Sbjct: 361 EIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVV 420

Query: 421 IKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGF 480
           IKLFVALGDLSRAVRYFAKLKEAGF+PTY+VYRN+ITIYLVSGRLAKCKEIYKEAENAGF
Sbjct: 421 IKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGF 480

Query: 481 VMDKQITSMLLQAKR 494
           +MDKQITSMLLQAKR
Sbjct: 481 MMDKQITSMLLQAKR 489

[Close]
BLAST of Lsi03G000760 vs. TrEMBL
Match: B9H5I8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2)

HSP 1 Score: 595.9 bits (1535), Expect = 4.5e-167
Identity = 306/469 (65.25%), Postives = 370/469 (78.89%), Query Frame = 1 

Query: 27  MAHFKT-YSRRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSETFQLPEGE 86
           MAH  T    R+ PKN+  PRR+KLPPD  VN FL        P TD +   +  L E E
Sbjct: 1   MAHSSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKK------PQTDSVQDHSDDLTEEE 60

Query: 87  DDEHEEIHAYDCRDNGVVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLPHKLRPPG 146
           ++E  E++     +  +VW+SEEIEAISSLF+GRIPQKPGKL R+RPLPLP+P+KLRP G
Sbjct: 61  EEEEIEVN-----NGEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPVPYKLRPLG 120

Query: 147 LPNPKIRPRVVVS-SRALLSKQVYKCPDFLIGLAREIRYLSPEENVSKVLNRWGPFLQKG 206
           LP PK      VS SRA +S Q+YK P FLIGLA+EI+ LSP+++VS VL+    +L KG
Sbjct: 121 LPAPKKHVNKQVSLSRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDNCSRYLHKG 180

Query: 207 SLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHELKVPLNLEEF 266
           SLSLTI+ELG +GLP+RAL+TFCW Q+QPRLFPDDRVLASTVEVLARNH+LKVP NLE+F
Sbjct: 181 SLSLTIRELGHLGLPERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLKVPFNLEKF 240

Query: 267 TKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVL 326
           T LASR V+EAMV+G I+GGSL LAWKL+  +K GKRMLDPSVY K+ILELGKNPDK+VL
Sbjct: 241 TNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELGKNPDKHVL 300

Query: 327 VLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALV 386
              LLDEL +RE L L+QQD TA++K C +LGKFE  E L++W+ +SGHEPSVVMYT L+
Sbjct: 301 AEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPSVVMYTTLI 360

Query: 387 HSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFA 446
           HSRYS+ KYREAL++VWEME ++C FDL AY VVIKLFVAL DL RAVRYF+KLKEAG +
Sbjct: 361 HSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFSKLKEAGLS 420

Query: 447 PTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           PTYD+YRNLIT+Y+VSGRLAKCKE++KEAE AGF   K++ + LLQ KR
Sbjct: 421 PTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458

[Close]
BLAST of Lsi03G000760 vs. TrEMBL
Match: B9R8P4_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1601230 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 7.9e-164
Identity = 301/465 (64.73%), Postives = 370/465 (79.57%), Query Frame = 1 

Query: 31  KTYSRRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSETFQLPEGEDDEHE 90
           KTY R++ PKNL  PRR+KLPPD  VN FL   T+   PF      ++F + +G+ D ++
Sbjct: 7   KTYYRKKLPKNLQSPRRSKLPPDFGVNLFLKKPTTGVDPF----QMDSFLVDDGDGDLNQ 66

Query: 91  EIHAYDCRDNG-VVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLPHKLRPPGLPNP 150
           E    +   NG +VW+S+EIEAISSLFQGRIPQ+PG LNR+RPLPLPLPHKLRP G P+P
Sbjct: 67  E----EKEQNGDIVWESDEIEAISSLFQGRIPQRPGNLNRERPLPLPLPHKLRPLGPPSP 126

Query: 151 KIRPR-VVVSSRALLSKQVYKCPDFLIGLAREIRYLSPEENVSKVLNRWGPFLQKGSLSL 210
           K   R VVVS R+ +  +VYK P FLI LA++I+ L+P+++VS VL+    FL+KGSLSL
Sbjct: 127 KKHNRNVVVSLRSPICNKVYKNPSFLISLAKQIKCLNPDDDVSAVLDDCARFLRKGSLSL 186

Query: 211 TIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHELKVPLNLEEFTKLA 270
           TI+ELG MG PDRAL+TFCWAQ+QP+L+PDDR+LASTVE+LARN +LKVP++ ++FT LA
Sbjct: 187 TIRELGHMGFPDRALQTFCWAQKQPQLYPDDRILASTVEILARNQDLKVPIDWQKFTSLA 246

Query: 271 SRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVLVLTL 330
           SRGV+EAM+RGF+KGG L LAWKLL  +K  KRMLD S+Y +LILELGKNPDK +LV  L
Sbjct: 247 SRGVIEAMIRGFLKGGRLKLAWKLLAVAKHDKRMLDASLYARLILELGKNPDKYMLVEQL 306

Query: 331 LDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRY 390
           LDELG+RE L L+ QD TAI+K C RL KFE  E L++W+ +SGHEPSVVMYT L+HSRY
Sbjct: 307 LDELGEREDLNLSHQDCTAIMKVCIRLQKFEFVECLFTWFKQSGHEPSVVMYTTLIHSRY 366

Query: 391 SDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYD 450
           S+KKYREAL+ VWEME ++  FDLPAY VVIKLFVAL DL RAVRYF+KLKEAG +PTYD
Sbjct: 367 SEKKYREALAGVWEMEGSSFLFDLPAYRVVIKLFVALNDLPRAVRYFSKLKEAGLSPTYD 426

Query: 451 VYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           +YRNLI IYLVSGRLAKCKEI+KEAE AGF +D+QI   LL  ++
Sbjct: 427 IYRNLIKIYLVSGRLAKCKEIWKEAEMAGFKLDEQIKMDLLHQEK 463

[Close]
BLAST of Lsi03G000760 vs. TrEMBL
Match: A0A061FD99_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_034404 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 5.2e-163
Identity = 299/477 (62.68%), Postives = 367/477 (76.94%), Query Frame = 1 

Query: 25  TMMAHFKTYS--RRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSETFQLP 84
           T MAH  T    R+ P KN   PRR KLPPD  VN FL    +      D    ++    
Sbjct: 45  TSMAHPNTRICYRKLPKKNHRYPRRTKLPPDFGVNLFLQEPRTGTDTAPDTQQMDSIPSR 104

Query: 85  EGEDDEHEEIHAYDCRDNG--VVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLPHK 144
             E++E  E    +  D G  VVW+S+E+EAISSLFQGRIPQKPGKL R RPLPLPLP+K
Sbjct: 105 SNEEEEESEGKEEEVEDQGNYVVWESDEVEAISSLFQGRIPQKPGKLGRKRPLPLPLPYK 164

Query: 145 LRPPGLPNPKIRPRV----VVSSRALLSKQVYKCPDFLIGLAREIRYLSPEENVSKVLNR 204
           LRP G P PK   ++    V+SSRA +SK++YK P FLIGLAREI+ L  +E+VS VL++
Sbjct: 165 LRPLGSPTPKKHVKLTSPGVISSRASVSKRLYKNPSFLIGLAREIKDLDSDEDVSAVLDK 224

Query: 205 WGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHELK 264
           W  FL+KGSLS+TI+ELG MGLP RAL+TFCWAQ+QP+LFPDDRVL STVEVLARN ELK
Sbjct: 225 WARFLRKGSLSMTIRELGHMGLPQRALQTFCWAQKQPQLFPDDRVLTSTVEVLARNRELK 284

Query: 265 VPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELG 324
           +P+NLE+F  L++R ++EAMV+GFIKGG+LNLAWKLL  +K+ KRML PS+Y KLILELG
Sbjct: 285 LPVNLEKFASLSNRSLIEAMVKGFIKGGNLNLAWKLLSVAKQSKRMLHPSIYAKLILELG 344

Query: 325 KNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPS 384
           KNPDK+ LV  LLD+LG+RE L L+QQD TAI+K C RLGKFE  E L++W+ +SG + +
Sbjct: 345 KNPDKHTLVEDLLDDLGERENLNLSQQDCTAIMKICIRLGKFETVESLFNWFKQSGRDTT 404

Query: 385 VVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFA 444
           VVMYT L+HSRYS+KKYREAL+LVWEMEA+ C  DLPAY V IK+FVAL DLSRAVRYF+
Sbjct: 405 VVMYTTLLHSRYSEKKYREALALVWEMEASECLLDLPAYRVAIKVFVALNDLSRAVRYFS 464

Query: 445 KLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           KLKEAGF+PTYD+YR+LI+IY+VSGRLAKCKE+ KEAE AGF +DK   + L + ++
Sbjct: 465 KLKEAGFSPTYDIYRDLISIYMVSGRLAKCKEVCKEAEMAGFSLDKHTLAQLSRLEK 521

[Close]
BLAST of Lsi03G000760 vs. TrEMBL
Match: A0A067KL02_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08073 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 1.5e-162
Identity = 304/496 (61.29%), Postives = 380/496 (76.61%), Query Frame = 1 

Query: 3   SIFSATLVSSILVKGNGGIGCQTMMAHFKTYSRRRPPKNLLCPRRNKLPPDPAVNQFLNN 62
           S++S +   S L K   GI   TM    K    R+ PKNL  PRR+KLPPD  VN FL  
Sbjct: 9   SLYSISPWGSKLSKKRSGITITTMTYSKKKTHYRKLPKNLRSPRRSKLPPDFGVNLFLKK 68

Query: 63  KTSA-PSPFTDLISSETFQLPEGEDDEHEEIHAYDCRDNGVVWDSEEIEAISSLFQGRIP 122
            +S   +   + I  +   L E E +E E++         +VW+S+EIEAISSLFQGRIP
Sbjct: 69  PSSGVDNSQMNSIVDDDGDLTEEEGEEQEQL-------GDIVWESDEIEAISSLFQGRIP 128

Query: 123 QKPGKLNRDRPLPLPLPHKLRPPGLPNPKIRPR----VVVSSRALLSKQVYKCPDFLIGL 182
           QKPGKLNR+RPLP PLP+KLRP GLP PK R +    +V SSRA   +QVYK P FLI L
Sbjct: 129 QKPGKLNRERPLPHPLPYKLRPLGLPTPKRRMKNASPLVYSSRASTCEQVYKNPRFLISL 188

Query: 183 AREIRYLSPEENVSKVLNRWGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFP 242
           A++I+ L+P+++ S +L+ +  FL+KGSLSLTI+ELG MGLP+RAL+TFCWAQ+QP+LFP
Sbjct: 189 AKQIKCLNPDQDASFILDDYTRFLRKGSLSLTIRELGHMGLPERALQTFCWAQKQPQLFP 248

Query: 243 DDRVLASTVEVLARNHELKVPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASK 302
           DDR+LASTVE+LAR+ +LKV  + ++FT LASRGV+EAMVRGFI+G SL+LAW+LL+A+K
Sbjct: 249 DDRILASTVELLARSQDLKVSFDFQKFTGLASRGVIEAMVRGFIRGRSLHLAWELLLAAK 308

Query: 303 KGKRMLDPSVYVKLILELGKNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGK 362
              RMLDPSVY KLILELGKNPDK+++V  LLD+L +RE L L+ QD TAI+K C RL K
Sbjct: 309 HDNRMLDPSVYAKLILELGKNPDKHIIVSQLLDDLSEREDLSLSHQDCTAIMKVCIRLKK 368

Query: 363 FEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCV 422
           FE+ E L+ W+ +SG E SVVMYT L+HSRYS+KKYREAL++VWEME +NC FDLPAY V
Sbjct: 369 FELVETLFGWFKQSGRELSVVMYTTLIHSRYSEKKYREALAVVWEMEGSNCLFDLPAYRV 428

Query: 423 VIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAG 482
           VIKLFVAL DLSRA RYF+KLKEAGF+PTYD+Y++LIT+Y+ SGRLAKCKEI +E E AG
Sbjct: 429 VIKLFVALNDLSRAARYFSKLKEAGFSPTYDIYKDLITVYMASGRLAKCKEIRREVEMAG 488

Query: 483 FVMDKQITSMLLQAKR 494
           F +DKQ+TS LLQ +R
Sbjct: 489 FKLDKQMTSALLQLER 497

[Close]
BLAST of Lsi03G000760 vs. TAIR10
Match: AT2G01860.1 (AT2G01860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 501.9 bits (1291), Expect = 4.5e-142
Identity = 271/478 (56.69%), Postives = 349/478 (73.01%), Query Frame = 1 

Query: 19  GGIGCQTMMAHFKTYSRRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSET 78
           G IG   + A  + +S++   KNL  PRR KLPPD  VN FL      P     +I  + 
Sbjct: 23  GNIGVTRVNASQRNHSKKLT-KNLRNPRRTKLPPDFGVNLFLRKPKIEPL----VIDDDD 82

Query: 79  FQLPEGEDDEHEEIHAYDCRDNGVVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLP 138
            Q+ E  +D+          D+ VVW+ EEIEAISSLFQ RIPQKP K +R RPLPLP P
Sbjct: 83  EQVQESVNDD----------DDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQP 142

Query: 139 HKLRPPGLPNPKIRPRVVVSSRAL--LSKQVYKCPDFLIGLAREIRYL-SPEENVSKVLN 198
           HKLRP GLP PK   + ++ S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN
Sbjct: 143 HKLRPLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLN 202

Query: 199 RWGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHEL 258
           +W  FL+KGSLS TI+ELG MGLP+RAL+T+ WA++   L PD+R+LAST++VLA++HEL
Sbjct: 203 KWVSFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHEL 262

Query: 259 KVPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILEL 318
           K+   L+    LAS+ V+EAM++G I+GG LNLA KL++ SK   R+LD SVYVK+ILE+
Sbjct: 263 KL---LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEI 322

Query: 319 GKNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEP 378
            KNPDK  LV+ LL+EL +RE LKL+QQD T+I+K C +LG+FE+ E L+ W+  S  EP
Sbjct: 323 AKNPDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREP 382

Query: 379 SVVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYF 438
           SVVMYT ++HSRYS++KYREA+S+VWEME +NC  DLPAY VVIKLFVAL DL RA+RY+
Sbjct: 383 SVVMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYY 442

Query: 439 AKLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           +KLKEAGF+PTYD+YR++I++Y  SGRL KCKEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 SKLKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]
BLAST of Lsi03G000760 vs. TAIR10
Match: AT2G39230.1 (AT2G39230.1 LATERAL ORGAN JUNCTION)

HSP 1 Score: 73.9 bits (180), Expect = 3.0e-13
Identity = 51/206 (24.76%), Postives = 91/206 (44.17%), Query Frame = 1 

Query: 276 MVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLDELGQR 335
           ++ GF K      AW ++          +  +Y  +I  L K   +      +L  L + 
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK-VGQTSKAKEMLQNLIKE 584

Query: 336 EALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYRE 395
           +   ++     +II    ++G  + A + Y    E+G  P+VV +T+L++      +   
Sbjct: 585 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 644

Query: 396 ALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLIT 455
           AL +  EM++     DLPAY  +I  F    D+  A   F++L E G  P   VY +LI+
Sbjct: 645 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 704

Query: 456 IYLVSGRLAKCKEIYKEAENAGFVMD 482
            +   G++    ++YK+  N G   D
Sbjct: 705 GFRNLGKMDAAIDLYKKMVNDGISCD 729

[Close]
BLAST of Lsi03G000760 vs. TAIR10
Match: AT5G25630.2 (AT5G25630.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 4.8e-11
Identity = 36/124 (29.03%), Postives = 61/124 (49.19%), Query Frame = 1 

Query: 346 TAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEA 405
           T ++      G+   A+ ++    E+GH PS++ YT L+ +    K+Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 406 ANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAK 465
           +    D   +  VI  F   G++  AV+   K+KE G  PT   Y  LI  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 466 CKEI 470
             E+
Sbjct: 169 SSEL 172

[Close]
BLAST of Lsi03G000760 vs. TAIR10
Match: AT5G21222.1 (AT5G21222.1 protein kinase family protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-10
Identity = 35/123 (28.46%), Postives = 63/123 (51.22%), Query Frame = 1 

Query: 346 TAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEA 405
           T ++      G+ + A  +++  +E GH+PS++ YT LV +    K +   LSL+ ++E 
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382

Query: 406 ANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAK 465
                D   +  +I      G+L +A++ F K+KE+G  PT   +  LI  Y   G++ K
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY---GKIGK 442

Query: 466 CKE 469
            +E
Sbjct: 443 LEE 442

[Close]
BLAST of Lsi03G000760 vs. TAIR10
Match: AT2G35130.2 (AT2G35130.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-10
Identity = 58/220 (26.36%), Postives = 97/220 (44.09%), Query Frame = 1 

Query: 272 VLEAMVRGFIKG-GSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLD 331
           V  A + G +K  G+   A  +    K+ +       Y  L++ L     K+ +   L  
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY-NLMINLYGKASKSYMSWKLYC 311

Query: 332 ELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHSRYSD 391
           E+   +  K N    TA++ A  R G  E AE+++    E G EP V +Y AL+ S YS 
Sbjct: 312 EMRSHQC-KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES-YSR 371

Query: 392 KKYREALSLVWE-MEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFAPTYDV 451
             Y    + ++  M+   C  D  +Y +++  +   G  S A   F ++K  G APT   
Sbjct: 372 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 431

Query: 452 YRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLL 490
           +  L++ Y  +  + KC+ I KE    G   D  + + +L
Sbjct: 432 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468

[Close]
BLAST of Lsi03G000760 vs. NCBI nr
Match: gi|449443604|ref|XP_004139567.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus])

HSP 1 Score: 862.1 bits (2226), Expect = 4.8e-247
Identity = 439/495 (88.69%), Postives = 460/495 (92.93%), Query Frame = 1 

Query: 1   MDSIFSATLVSSILVKGNGGIGCQTMMAHFKTYSRRRPPKNLLCPRRNKLPPDPAVNQFL 60
           MDSI SAT VSSILVKGNGGIGCQ  M HFK  SRRRPPKNLLCPRR KLPP+PAVNQF 
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSP-FTDLISSETFQLPEGEDDEHEEIHAYD-CRDNGVVWDSEEIEAISSLFQG 120
           NNKTSAPSP FTDLISS+ FQ      DEHEEIHA+D  +D  VVWDS+EIEAISSLFQG
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQ------DEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQG 120

Query: 121 RIPQKPGKLNRDRPLPLPLPHKLRPPGLPNPKIRPRVVVSSRALLSKQVYKCPDFLIGLA 180
           RIPQKPGKLNR+RPLPLPLPHKLRPP LPNPKIRP  VVSSRALLSKQVYK PDFLIGLA
Sbjct: 121 RIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLA 180

Query: 181 REIRYLSPEENVSKVLNRWGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPD 240
           REIR LSPEENVSKVLNRWGPFLQKGSLSLTIKELG MGLPDRAL TFCWAQEQ RLFPD
Sbjct: 181 REIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPD 240

Query: 241 DRVLASTVEVLARNHELKVPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKK 300
           DRVLASTVEVL+RNHELKV +NLEEFTKLASRGVLEAM+RGFI+GGSLNLAWKLLVA+KK
Sbjct: 241 DRVLASTVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKK 300

Query: 301 GKRMLDPSVYVKLILELGKNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKF 360
           GKRMLDPSVYVKLILELGKNPDKN+LVLTLL+ELGQREALKLNQQD T I+K CTRLGKF
Sbjct: 301 GKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKF 360

Query: 361 EIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVV 420
           EIAEKLYSWYVESGHEPS+VMYTALVHSRYSD+KYREALSLVWEME+ NCPFDLPAY VV
Sbjct: 361 EIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVV 420

Query: 421 IKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGF 480
           IKLFVALGDLSRAVRYFAKLKEAGF+PTY+VYRN+ITIYLVSGRLAKCKEIYKEAENAGF
Sbjct: 421 IKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGF 480

Query: 481 VMDKQITSMLLQAKR 494
           +MDKQITSMLLQAKR
Sbjct: 481 MMDKQITSMLLQAKR 489

[Close]
BLAST of Lsi03G000760 vs. NCBI nr
Match: gi|659071841|ref|XP_008462173.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])

HSP 1 Score: 859.8 bits (2220), Expect = 2.4e-246
Identity = 441/495 (89.09%), Postives = 458/495 (92.53%), Query Frame = 1 

Query: 1   MDSIFSATLVSSILVKGNGGIGCQTMMAHFKTYSRRRPPKNLLCPRRNKLPPDPAVNQFL 60
           M SI SAT VSSILVKGNGGIGCQ  M HFK  SRRRPPKNLLCPRR KLPPDPAVNQFL
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSP-FTDLISSETFQLPEGEDDEHEEIHAYD-CRDNGVVWDSEEIEAISSLFQG 120
           NNKTSAPSP FTDLISS+ FQ      DEHEEIHAYD  +D  VVWDS+EIEAISSLFQG
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQ------DEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQG 120

Query: 121 RIPQKPGKLNRDRPLPLPLPHKLRPPGLPNPKIRPRVVVSSRALLSKQVYKCPDFLIGLA 180
           RIPQKPGKLNR+RPLPLPLPHKLRPP LPNPKIRP   VSSRALLSK+VYK PDFLIGLA
Sbjct: 121 RIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLA 180

Query: 181 REIRYLSPEENVSKVLNRWGPFLQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPD 240
           R IR LSPEENVSKVLNRWGPFLQKGSLSLTIKELG MGLPDRALKTFCW QEQ RLFPD
Sbjct: 181 RAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPD 240

Query: 241 DRVLASTVEVLARNHELKVPLNLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKK 300
           DRVLASTVEVL+RNHELKVP+NLEEFTKLASRGVLEAM+RGFIKGGSLNLAWKLLVA+KK
Sbjct: 241 DRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKK 300

Query: 301 GKRMLDPSVYVKLILELGKNPDKNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKF 360
           GKRMLDPSVYVKLILELGKNPDKNVLVLTLL+ELGQREALKLNQQD+T IIK CTRL KF
Sbjct: 301 GKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKF 360

Query: 361 EIAEKLYSWYVESGHEPSVVMYTALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVV 420
           EIAEKLY WYVESGHEPS+VMYTALVHSRYSD+KYREALSLVWEME+ANCPFDLPAY VV
Sbjct: 361 EIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVV 420

Query: 421 IKLFVALGDLSRAVRYFAKLKEAGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGF 480
           IKLFVALGDLSRAVRYFAKLKEAGF+PTYDVYRN+ITIYLVSGRLAK KEIYKEAENAGF
Sbjct: 421 IKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGF 480

Query: 481 VMDKQITSMLLQAKR 494
           +MDKQITSMLLQAKR
Sbjct: 481 IMDKQITSMLLQAKR 489

[Close]
BLAST of Lsi03G000760 vs. NCBI nr
Match: gi|1009170746|ref|XP_015866362.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Ziziphus jujuba])

HSP 1 Score: 598.2 bits (1541), Expect = 1.3e-167
Identity = 312/471 (66.24%), Postives = 372/471 (78.98%), Query Frame = 1 

Query: 25  TMMAHFKTYSRRRPPKNLLCP-RRNKLPPDPAVNQFLNNKTSAPSPFTDLISSETFQLPE 84
           T++AH  +Y RRR PKNL  P RR KLPPD  VN FL  KT+ P     + + E  +  E
Sbjct: 31  TLVAH--SYGRRRLPKNLRYPPRRTKLPPDLGVNLFL--KTTKPVNDPTMKTQEEEEEEE 90

Query: 85  GEDDEHEEIHAYDCRDNG-VVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLPHKLR 144
            E++  E+ H  +  D+   VWDS+EIEAI+SLFQGRIPQKPGKLNR+RPLPLPLP+KLR
Sbjct: 91  EEEEGEEQQHQPEDNDHDDFVWDSDEIEAITSLFQGRIPQKPGKLNRERPLPLPLPYKLR 150

Query: 145 PPGLPNPKIRPRVVVSSRALLSKQVYKCPDFLIGLAREIRYLSPEENVSKVLNRWGPFLQ 204
           P GLP  K RP++     +L S  +YK P  LIGLAR+I+ L  EE+VS VLN+W  FLQ
Sbjct: 151 PLGLPTSKKRPKIP----SLPSMHMYKNPAALIGLARKIKSLPAEEDVSVVLNKWANFLQ 210

Query: 205 KGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHELKVPLNLE 264
           KGSLS+TI+ELG MGLPDRAL+TFCW Q QP LFPDDR LA+T+EVLARNHELK+P +LE
Sbjct: 211 KGSLSMTIRELGHMGLPDRALQTFCWVQRQPHLFPDDRTLATTIEVLARNHELKMPFDLE 270

Query: 265 EFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKN 324
           +F  LASR V+EAMVRGF KGGSLNLAWK+++ +K GKRMLDPSVY KLILEL KNPDK 
Sbjct: 271 KFVALASRNVIEAMVRGFAKGGSLNLAWKVVLIAKDGKRMLDPSVYAKLILELAKNPDKY 330

Query: 325 VLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTA 384
           VL   LL+ELG+RE L L+QQD TAI+K CTRLGKFE  E LY+W+ +SG +PSVVMYT 
Sbjct: 331 VLAEVLLNELGEREELNLSQQDCTAIMKVCTRLGKFETVEGLYNWFKQSGRDPSVVMYTT 390

Query: 385 LVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAG 444
           L+HSRY  KKYREAL++VWEMEA+NC FDLPAY +VIKLFVAL DLSRAVRYF++LKEAG
Sbjct: 391 LIHSRYLVKKYREALAVVWEMEASNCLFDLPAYRMVIKLFVALNDLSRAVRYFSRLKEAG 450

Query: 445 FAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           F+PTYD+YR+LI IY+VSGRLAKCK++YKEAE AGF +DK   S L Q +R
Sbjct: 451 FSPTYDIYRDLIKIYMVSGRLAKCKDVYKEAEMAGFKLDKGTMSQLQQLER 493

[Close]
BLAST of Lsi03G000760 vs. NCBI nr
Match: gi|566173530|ref|XP_002307797.2| (hypothetical protein POPTR_0005s27370g [Populus trichocarpa])

HSP 1 Score: 595.9 bits (1535), Expect = 6.5e-167
Identity = 306/469 (65.25%), Postives = 370/469 (78.89%), Query Frame = 1 

Query: 27  MAHFKT-YSRRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSETFQLPEGE 86
           MAH  T    R+ PKN+  PRR+KLPPD  VN FL        P TD +   +  L E E
Sbjct: 1   MAHSSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKK------PQTDSVQDHSDDLTEEE 60

Query: 87  DDEHEEIHAYDCRDNGVVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLPHKLRPPG 146
           ++E  E++     +  +VW+SEEIEAISSLF+GRIPQKPGKL R+RPLPLP+P+KLRP G
Sbjct: 61  EEEEIEVN-----NGEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPVPYKLRPLG 120

Query: 147 LPNPKIRPRVVVS-SRALLSKQVYKCPDFLIGLAREIRYLSPEENVSKVLNRWGPFLQKG 206
           LP PK      VS SRA +S Q+YK P FLIGLA+EI+ LSP+++VS VL+    +L KG
Sbjct: 121 LPAPKKHVNKQVSLSRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDNCSRYLHKG 180

Query: 207 SLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHELKVPLNLEEF 266
           SLSLTI+ELG +GLP+RAL+TFCW Q+QPRLFPDDRVLASTVEVLARNH+LKVP NLE+F
Sbjct: 181 SLSLTIRELGHLGLPERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLKVPFNLEKF 240

Query: 267 TKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPDKNVL 326
           T LASR V+EAMV+G I+GGSL LAWKL+  +K GKRMLDPSVY K+ILELGKNPDK+VL
Sbjct: 241 TNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELGKNPDKHVL 300

Query: 327 VLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMYTALV 386
              LLDEL +RE L L+QQD TA++K C +LGKFE  E L++W+ +SGHEPSVVMYT L+
Sbjct: 301 AEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPSVVMYTTLI 360

Query: 387 HSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKEAGFA 446
           HSRYS+ KYREAL++VWEME ++C FDL AY VVIKLFVAL DL RAVRYF+KLKEAG +
Sbjct: 361 HSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFSKLKEAGLS 420

Query: 447 PTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           PTYD+YRNLIT+Y+VSGRLAKCKE++KEAE AGF   K++ + LLQ KR
Sbjct: 421 PTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458

[Close]
BLAST of Lsi03G000760 vs. NCBI nr
Match: gi|1000986438|ref|XP_002510687.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Ricinus communis])

HSP 1 Score: 587.8 bits (1514), Expect = 1.8e-164
Identity = 304/473 (64.27%), Postives = 375/473 (79.28%), Query Frame = 1 

Query: 25  TMMAHF--KTYSRRRPPKNLLCPRRNKLPPDPAVNQFLNNKTSAPSPFTDLISSETFQLP 84
           T+M+H   KTY R++ PKNL  PRR+KLPPD  VN FL   T+   PF      ++F + 
Sbjct: 16  TLMSHSNTKTYYRKKLPKNLQSPRRSKLPPDFGVNLFLKKPTTGVDPF----QMDSFLVD 75

Query: 85  EGEDDEHEEIHAYDCRDNG-VVWDSEEIEAISSLFQGRIPQKPGKLNRDRPLPLPLPHKL 144
           +G+ D ++E    +   NG +VW+S+EIEAISSLFQGRIPQ+PG LNR+RPLPLPLPHKL
Sbjct: 76  DGDGDLNQE----EKEQNGDIVWESDEIEAISSLFQGRIPQRPGNLNRERPLPLPLPHKL 135

Query: 145 RPPGLPNPKIRPR-VVVSSRALLSKQVYKCPDFLIGLAREIRYLSPEENVSKVLNRWGPF 204
           RP G P+PK   R VVVS R+ +  +VYK P FLI LA++I+ L+P+++VS VL+    F
Sbjct: 136 RPLGPPSPKKHNRNVVVSLRSPICNKVYKNPSFLISLAKQIKCLNPDDDVSAVLDDCARF 195

Query: 205 LQKGSLSLTIKELGRMGLPDRALKTFCWAQEQPRLFPDDRVLASTVEVLARNHELKVPLN 264
           L+KGSLSLTI+ELG MG PDRAL+TFCWAQ+QP+L+PDDR+LASTVE+LARN +LKVP++
Sbjct: 196 LRKGSLSLTIRELGHMGFPDRALQTFCWAQKQPQLYPDDRILASTVEILARNQDLKVPID 255

Query: 265 LEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVASKKGKRMLDPSVYVKLILELGKNPD 324
            ++FT LASRGV+EAM+RGF+KGG L LAWKLL  +K  KRMLD S+Y +LILELGKNPD
Sbjct: 256 WQKFTSLASRGVIEAMIRGFLKGGRLKLAWKLLAVAKHDKRMLDASLYARLILELGKNPD 315

Query: 325 KNVLVLTLLDELGQREALKLNQQDTTAIIKACTRLGKFEIAEKLYSWYVESGHEPSVVMY 384
           K +LV  LLDELG+RE L L+ QD TAI+K C RL KFE  E L++W+ +SGHEPSVVMY
Sbjct: 316 KYMLVEQLLDELGEREDLNLSHQDCTAIMKVCIRLQKFEFVECLFTWFKQSGHEPSVVMY 375

Query: 385 TALVHSRYSDKKYREALSLVWEMEAANCPFDLPAYCVVIKLFVALGDLSRAVRYFAKLKE 444
           T L+HSRYS+KKYREAL+ VWEME ++  FDLPAY VVIKLFVAL DL RAVRYF+KLKE
Sbjct: 376 TTLIHSRYSEKKYREALAGVWEMEGSSFLFDLPAYRVVIKLFVALNDLPRAVRYFSKLKE 435

Query: 445 AGFAPTYDVYRNLITIYLVSGRLAKCKEIYKEAENAGFVMDKQITSMLLQAKR 494
           AG +PTYD+YRNLI IYLVSGRLAKCKEI+KEAE AGF +D+QI   LL  ++
Sbjct: 436 AGLSPTYDIYRNLIKIYLVSGRLAKCKEIWKEAEMAGFKLDEQIKMDLLHQEK 480

The following BLAST results are available for this feature:
BLAST of Lsi03G000760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP142_ARATH7.9e-14156.69Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN... [more]
PP194_ARATH5.3e-1224.76Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidop... [more]
PP397_ARATH8.5e-1029.03Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN... [more]
PP395_ARATH3.2e-0928.46Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN... [more]
PP186_ARATH5.5e-0926.36Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN... [more]
BLAST of Lsi03G000760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVM0_CUCSA3.4e-24788.69Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1[more]
B9H5I8_POPTR4.5e-16765.25Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2[more]
B9R8P4_RICCO7.9e-16464.73Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A061FD99_THECC5.2e-16362.68Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0344... [more]
A0A067KL02_JATCU1.5e-16261.29Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08073 PE=4 SV=1[more]
BLAST of Lsi03G000760 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01860.14.5e-14256.69 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G39230.13.0e-1324.76 LATERAL ORGAN JUNCTION[more]
AT5G25630.24.8e-1129.03 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G21222.11.8e-1028.46 protein kinase family protein[more]
AT2G35130.23.1e-1026.36 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Lsi03G000760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443604|ref|XP_004139567.1|4.8e-24788.69PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativu... [more]
gi|659071841|ref|XP_008462173.1|2.4e-24689.09PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo][more]
gi|1009170746|ref|XP_015866362.1|1.3e-16766.24PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Ziziphus jujub... [more]
gi|566173530|ref|XP_002307797.2|6.5e-16765.25hypothetical protein POPTR_0005s27370g [Populus trichocarpa][more]
gi|1000986438|ref|XP_002510687.2|1.8e-16464.27PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Ricinus commun... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G000760.1Lsi03G000760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 346..365
score:
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 399..457
score: 6.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 414..446
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 376..410
score: 7.563coord: 411..445
score: 9.547coord: 341..375
score: 8.769coord: 446..480
score: 7.202coord: 269..305
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 350..473
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 179..491
score: 2.1E-185coord: 121..150
score: 2.1E-185coord: 45..69
score: 2.1E
NoneNo IPR availablePANTHERPTHR24015:SF642SUBFAMILY NOT NAMEDcoord: 45..69
score: 2.1E-185coord: 179..491
score: 2.1E-185coord: 121..150
score: 2.1E