CsGy1G014140 (gene) Cucumber (Gy14) v2

NameCsGy1G014140
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionpentatricopeptide repeat-containing protein At2g01860
LocationChr1 : 9823269 .. 9830286 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCAAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGTGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTCGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGAATCACCTGTGGCAAGTGATATTTTTTATTATCTATCACTGAGTTGCACTATCGGTTTACCTATCATCTAGTAGGTGAGTTGTTCTCAATGTATTGGAATTGCATTTTCATCTGCACTAAATAAATTGTTAATGAATATTCTTTGTTTCCCTTCATCTACCACGTTCATATTGCATCTAATCTATGGATTTCAGTAGTACATCTTAAAAGGTACTTGGATTTTTGCTTTAGGATATATACATATGACTCACATAATGACTTATGCACTTTTTTTTTTTTTTGTTTGTTTTTTTCCTTTTGAAAACAAAGCATGAAGCTCAAATGCATTACGCCAGAAATCTCTGATTTGCCCCAATACATTGTGATATCCAATCTGGCACATCAGTAACCCAACAAGAGAAAACCTGACAAGAAAGAGAAAATTTGGCCGATTTGGCCGATAAATGGGCCACACTATTACTCGTTCTGGGCAATTAAGTAAAGTGAAAACATCCGTATAAATAACTCCATATACAGATAGATAACTCCTTATGCAGATAAGGAAAAGTTGAAAGAATGTCTCCTGGACTAATAATATACATTGTACAAATTCAACGAAGATTTTGACATATACTGACCAACAATTCTTATTCTCATCTAGCTTCTATATATTGTTAGTTCTATTATTCTATGAAGTAACTCAATGCTTTGTCCTTCCAAGTACCTGTTTCTAGATAAGTTTCATAAAAGTGTACCATTCCTGTTGTAGTTATAGTCAATACAGATGTGCTTCTGGTACCAAAACATCCCTGTGTTGAAATTTTTTAAAAAACTAAGTCAAAATTTCTGCTATGAATGAAATCAAATTGTATGCTTATCAGAGGGGTCTGAAATTGGACAAAGACAGAGCTTGTATTGTACTCCCAGTCAGGGGAGGATATATGAGGAAGTTTGCTTTCATCAATTTTTACATTGCCCCTCATTAATCTCTCATGGTATTTCACCTTCAGCATATATACGAAGCTGTTCATTAAATTTTAGCTTCAAGTGCTGCATCTGCATGTAAGTCAAAGCCTTCAGTCACTCTATTTTATTTTTCTTCACTTTTTCTTTCTTGCGGGTTCATTTGCCTTTTCACATGTGCCCATGTGTGTGTATTTGTAACCAATCTCCCCTTGTTGATGAATATACATTTGAACATTTTGGGACCAACGAAGAAAGTTATCCCATTAAGTTGAATGGTAGTTATTTGGACAGTGGGACTGTTGTTTAGGGTGCGGTTGTCTAAGACTTCAGTGGCAATGGGCTTGGTGTCTGACATATTGCTGAAAAAACACCAACCCAAAGAGAAAAACCAAAGATTTGGAAAGAAAACACCAGATTAAAGAAGAAAAAACAGGGGTGGCGGTGATTGGAGGTGTAACATGGCAGAAGGTGACGGAACACGACATTGGTGTGATAGAACACCAACTAGGAGTGATCTTATTCAATCGGTAAAAACGAAAGAAATTACAAGGATGAATCGATAGATTGTCAATTCGGTGAAATAAATGCAAGAATACAAGAAAATAGTTGATTGCTCTCCTTCTATCTCTCCTCTCTCTCAAGGATGAAGATAAAGGTCCTTCGAAAATATTTCCTCCCCTCTCACAGTGACTCTCCCCGCTATTTAAACCTCCCATTCTCTCCTAACTAACTGTGGGCCCAGTATTAGCACTCACACTCACTCCCCATTACACATGCTTTCTCTTTCTTTCCTCTCCTGCTATATTGCAATATTATTGGAGGTCTAACATTGTTGCAGACTTGACTGACCTATGGTAGGAGCTATCCTAAGCAAAAAGCGGCTCCTTCGGACAAGTTTCACTCGAGCGAAAGAAAAAAAAAAGCTTTGACGGCTCTGGCTCCGGGTTCAGCTTGGATTTGAAGGATTGACCACGATGGTAAACAAGGAAAAGTTGACGACCCTGGCAGCGGGGGGCAAATAGGGTGTTTTTAGTGTTTGAGAAATAAGGTGTTTTTAGAGTTTTAGGACAATTTAATCTCTGATACCATGTGTAAAAATGTGTTTTCTCTTATTTCCCTCGGAAAGAAAGGGGTTTTCTTAAATAGAAATACCCAATACAAAAAATGAAAAATATAAATAAGGAAAAAATAAATACAGAAATATATCTTAAATACAATGAAAATATTAACAATGAAGGAAATAATCAACAATAAACAAACTTCTTAACTAAGATTAGTTGATTTTAACATGATGGAAGTTTTCTTTCACGAAGAATTTGGCTGAAATCTTGCCTGAAGAATTCAGTTAAATTCTTCTATCATTATGAGATCCAATATAAAATGTAAATTTAAAAATAATAAATAAGTGAAACTTTTGGCATCTCTTTCTTGGAGGGAATATCGATATTACAAAAAGGGAGGGTGGGGGGATGAAAAGAAAATAATTAGTGATGTATATCAGTGGATTGAATTTCCTCTAATTGAAGGGGATATAGATAAGAAATAGAAATTGGGAAAAGAATTGGAGAAACGAGAGAGATTGATTTGAGAGAAGCCGAGGAAAAAACTGAATGACATTTTGTGTATGGAGTACTTGACCAGTTCCAGCTTTCTGAGTGGGATGGTATAATGTACTGTTGGCTCTGGCTTTATGTGGTGTCCTTGCAATGGCACTCTCCACTACATGTTCACAATGTTGAAAGCTAAAGAAAATGTGCAATGGGAGTCGACTATTGAAGGTACACCACATGACACCCTTGCACAAGGCAAGAAGATGGTTACGTGCCTCACCTTGCCTAGGACCATAAGCTTGCCTCAAAATGCACCTCAATAACACTGCTGAGTACCTTTTCAATTTATACTTTTCAGCCTGAAAGCTGGTTTGCTAATTGAAAGTGACCGGTGGTTTTAGCAAGAATGTGTTAGGTACTTAAGCACCTTGGAGAGCCACGGGGTTTCTGTTGGGGTAGTAGAGCCAAGCTACTTAGGGCCCGTTTGGTAACGTTCCCGTTTTCTGTTTCCCATTTCTTGTTTCTGGTTCTAATTTTTTAAGAAACGGATGTGTTTGGTAACGTTCCTGTTTCTTGTTCCCAAAATAATTAGAAATGTTTCTAATTTAATAAGAAATTTGTGGGAACAACAAAAAAGAGTTTCTCCTCGTTCCATTCTTGTTCTCTTCCCTTTGTTTCTCCTCTTTGTTCTTGGGCTTTCTTCTCCGGCTCTCTTTTTCTCTTCGTTCGTTCCTCTTCCGTTTCTCTTTGTTTAGTTCCTCTCCGATTACCTTTTCTCTCTTTGTTCTTCGTTTCTTCTCCGGCTTTCTTCTTTGCCTCTCTTCTAAAGTTATGGCTATAGCTTTCTCAAGCTTCCTCTTCATCAAACGTACAGCTACCTTTTCCTCTTCATCAATTTCCAAATTCATGATTTTCTTTGCTCCATCAACAGGAAGCTCTTCTCTTTCTCCTCACTCCCAAAGCGGAACTTGGGAACAGAAAGGTATTCCCTTAATTTTCTCCCATTTTCCTATCATTTCTGTTATGGGTTTCTCAAATTTTCAATCCTAAGATGAATTTTGTTAAGATTTAAACCTTTTTGTTATCTTTGTTTGGCAGGATTTTTGTTTTCTATAGTAAATTTCAGCTGTAGTTTAGTGGAAAGGTGGATATTGTTTTTGGAAATTGAATCTATGTATTTGCTACTTATTGTTATCATTGTTCATTATCAAATTAGAACTCCAATCCTCTGTTTTTGCCTTCAAAACCCCTTTCAGATTCCAGGCATTCCTTGATTTATACTGATTTTATGCCTCATTTAATGATAATTAGCCTTATGGGTACTCTTGGGTTATTTTAACAACATTGCCAAATTTTAGCCTTTGTGTTCTATGTATTAGTGACACATCAGTTTAAGCAAAATACTCTTTAATGATCTCAGGTTCTCAACATTTTTTTATACAGCTGTCTAGGAAGTGAAACCTTCAATGGCACAATATGCTAGTTTAGTCCATACTAGCCTCTTAAATTATGGCTTTACTCACAAAATGAATCCTTCATATTGGAGATATGATATGGTTAAATCACGACCTTCCCCTCAACGTAGCTTTCGTGTCAAAGTTGTGCAAGATACCGAAGGTCCTAGTAGGATAGTTGATATCATTAGACTCGTGCCTGAGCTCTCAAGAAATTACTTTAGAAGTCCTTCGAGGAGAGCCCTTTTTGGATGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAAAATATCTCATTGTCATTTGGAGCTTTTGGAGTAAATGATGTTTTTGCTACTGTGGTATGCATTCTCCTCACCGATGTTTCAATTTTATTACAATCGACCAAAGGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGTTTCACTTGTGGTCTTTTCATTGATGCTTTCAAACTTGCTAGTTAACAGCACTTGAAAAAACCATTCTGGTGGTAGCTATAGCATTTCCATTTGTAAAGTTCTTTGAGCGATAATTTTGGTTTTACTCTCTATCTGTACAGCTTGTTCTAATTCTTTTTGTTGAATTTTTTTCCATTTTCCCCTTTGTTTCTTCTGTATATTTTCAACATACGGTTTTCATTGGAGAGTTAAATGTTCTATACACCCTCAAATCAAATATAGTAACAAATTTGAATGTAATTGATGACTTTTAAGAGTTTAATTTTTGTTTGTGTATTGAAATGCATCCCTTGCAATGGAGAATTGTTTGGAAACCATGAATCCAGTGTTGACTATCAGCGACAAATTTAAGATGGTAAGTTGTTAATAAGATACAAGCTTTCACCTAGTGTACTTCAACAGAACCATAATGTGTAGTCACTTGGCATTATTGTGTTTACTATTGTTGTTAAGAATATCTCTTATCTTTTGGTTTGATTCATAGATAAGCTTCAGATGTATTGAAATTTATGCTGATACATAATTTAAATGATATTGATCTTACCTTCTTATCTTTTGGTTTGATTCAAGGCTGTTGTAGTCTATATTTTTGTGAATAACTGGCATTTCTTTCAAACTTTCATATAAATATTTGTTTTAAATCTCTTTTGTAGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACACTGAAGTCATGTTCTCTAATGTAGAGGAAGTCCTTGTGGTTGAAGAAGCTCAGCCAACTGAAACAAATCATTGCACAAGAGAAGAAGTTGAACCAAAACAAGCTACCAAAAAGGAGTTGAAGCCCATTGCCTGTGTACATAAGATCCTTATATTTAACTTGATTCTGTTGTCCCAAAGCTCAATATCTTAGTGCATTAAAGGGACTAGTGTTTTCATATATGTATATATTGAGCTGTAAGTTTATGTATATGTAGATGCAATGGGACAGATAAGCTAAGAATTTAGATGAGTTGTCGGTAGTCATCCAAGAAGAACAAATATAGAGAATCATGAAGTTTGTAAAACAAAACAACCTTGAATGTTTGGTTTGTATTGTGAATTATCTATGCCTCTTTCTCCTTTCTAGTTTTAATGATTTTCTTTTTTATTCCAATT

mRNA sequence

ATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCAAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGTGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTCGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATATGTGCTTCTGGTACCAAAACATCCCTGTGTTGAAATTTTTTAAAAAACTAAGTCAAAATTTCTGCTATGAATGAAATCAAATTGTATGCTTATCAGAGGGGTCTGAAATTGGACAAAGACAGAGCTTGTATTGTACTCCCAGTCAGGGGAGGATATATGAGGAAGTTTGCTTTCATCAATTTTTACATTGCCCCTCATTAATCTCTCATGGTATTTCACCTTCAGCATATATACGAAGCTGTTCATTAAATTTTAGCTTCAAGTGCTGCATCTGCATGTAAGTCAAAGCCTTCAGTCACTCTATTTTATTTTTCTTCACTTTTTCTTTCTTGCGGGTTCATTTGCCTTTTCACATGTGCCCATGTGTGTGTATTTGTAACCAATCTCCCCTTGTTGATGAATATACATTTGAACATTTTGGGACCAACGAAGAAAGTTATCCCATTAAGTTGAATGGTAGTTATTTGGACAGTGGGACTGTTGTTTAGGGTGCGGTTGTCTAAGACTTCAGTGGCAATGGGCTTGGTGTCTGACATATTGCTGAAAAAACACCAACCCAAAGAGAAAAACCAAAGATTTGGAAAGAAAACACCAGATTAAAGAAGAAAAAACAGGGGTGGCGGTGATTGGAGGTGTAACATGGCAGAAGGTGACGGAACACGACATTGGTGTGATAGAACACCAACTAGGAGTGATCTTATTCAATCGGTAAAAACGAAAGAAATTACAAGGATGAATCGATAGATTGTCAATTCGGTGAAATAAATGCAAGAATACAAGAAAATAGTTGATTGCTCTCCTTCTATCTCTCCTCTCTCTCAAGGATGAAGATAAAGGTCCTTCGAAAATATTTCCTCCCCTCTCACAGTGACTCTCCCCGCTATTTAAACCTCCCATTCTCTCCTAACTAACTGTGGGCCCAGTATTAGCACTCACACTCACTCCCCATTACACATGCTTTCTCTTTCTTTCCTCTCCTGCTATATTGCAATATTATTGGAGGTCTAACATTGTTGCAGACTTGACTGACCTATGGTAGGAGCTATCCTAAGCAAAAAGCGGCTCCTTCGGACAAGTTTCACTCGAGCGAAAGAAAAAAAAAAGCTTTGACGGCTCTGGCTCCGGGTTCAGCTTGGATTTGAAGGATTGACCACGATGGTAAACAAGGAAAAGTTGACGACCCTGGCAGCGGGGGGCAAATAGGGTGTTTTTAGTGTTTGAGAAATAAGGTGTTTTTAGAGTTTTAGGACAATTTAATCTCTGATACCATGTGTAAAAATGTGTTTTCTCTTATTTCCCTCGGAAAGAAAGGGGTTTTCTTAAATAGAAATACCCAATACAAAAAATGAAAAATATAAATAAGGAAAAAATAAATACAGAAATATATCTTAAATACAATGAAAATATTAACAATGAAGGAAATAATCAACAATAAACAAACTTCTTAACTAAGATTAGTTGATTTTAACATGATGGAAGTTTTCTTTCACGAAGAATTTGGCTGAAATCTTGCCTGAAGAATTCAGTTAAATTCTTCTATCATTATGAGATCCAATATAAAATGTAAATTTAAAAATAATAAATAAGTGAAACTTTTGGCATCTCTTTCTTGGAGGGAATATCGATATTACAAAAAGGGAGGGTGGGGGGATGAAAAGAAAATAATTAGTGATGTATATCAGTGGATTGAATTTCCTCTAATTGAAGGGGATATAGATAAGAAATAGAAATTGGGAAAAGAATTGGAGAAACGAGAGAGATTGATTTGAGAGAAGCCGAGGAAAAAACTGAATGACATTTTGTGTATGGAGTACTTGACCAGTTCCAGCTTTCTGAGTGGGATGGTATAATGTACTGTTGGCTCTGGCTTTATGTGGTGTCCTTGCAATGGCACTCTCCACTACATGTTCACAATGTTGAAAGCTAAAGAAAATGTGCAATGGGAGTCGACTATTGAAGGTACACCACATGACACCCTTGCACAAGGCAAGAAGATGGTTACGTGCCTCACCTTGCCTAGGACCATAAGCTTGCCTCAAAATGCACCTCAATAACACTGCTGAGTACCTTTTCAATTTATACTTTTCAGCCTGAAAGCTGGTTTGCTAATTGAAAGTGACCGGTGGTTTTAGCAAGAATGTGTTAGGTACTTAAGCACCTTGGAGAGCCACGGGGTTTCTGTTGGGGTAGTAGAGCCAAGCTACTTAGGGCCCGTTTGGTAACGTTCCCGTTTTCTGTTTCCCATTTCTTGTTTCTGGTTCTAATTTTTTAAGAAACGGATGTGTTTGGTAACGTTCCTGTTTCTTGTTCCCAAAATAATTAGAAATGTTTCTAATTTAATAAGAAATTTGTGGGAACAACAAAAAAGAGTTTCTCCTCGTTCCATTCTTGTTCTCTTCCCTTTGTTTCTCCTCTTTGTTCTTGGGCTTTCTTCTCCGGCTCTCTTTTTCTCTTCGTTCGTTCCTCTTCCGTTTCTCTTTGTTTAGTTCCTCTCCGATTACCTTTTCTCTCTTTGTTCTTCGTTTCTTCTCCGGCTTTCTTCTTTGCCTCTCTTCTAAAGTTATGGCTATAGCTTTCTCAAGCTTCCTCTTCATCAAACGTACAGCTACCTTTTCCTCTTCATCAATTTCCAAATTCATGATTTTCTTTGCTCCATCAACAGGAAGCTCTTCTCTTTCTCCTCACTCCCAAAGCGGAACTTGGGAACAGAAAGGTATTCCCTTAATTTTCTCCCATTTTCCTATCATTTCTGTTATGGGTTTCTCAAATTTTCAATCCTAAGATGAATTTTGTTAAGATTTAAACCTTTTTGTTATCTTTGTTTGGCAGGATTTTTGTTTTCTATAGTAAATTTCAGCTGTAGTTTAGTGGAAAGGTGGATATTGTTTTTGGAAATTGAATCTATGTATTTGCTACTTATTGTTATCATTGTTCATTATCAAATTAGAACTCCAATCCTCTGTTTTTGCCTTCAAAACCCCTTTCAGATTCCAGGCATTCCTTGATTTATACTGATTTTATGCCTCATTTAATGATAATTAGCCTTATGGGTACTCTTGGGTTATTTTAACAACATTGCCAAATTTTAGCCTTTGTGTTCTATGTATTAGTGACACATCAGTTTAAGCAAAATACTCTTTAATGATCTCAGGTTCTCAACATTTTTTTATACAGCTGTCTAGGAAGTGAAACCTTCAATGGCACAATATGCTAGTTTAGTCCATACTAGCCTCTTAAATTATGGCTTTACTCACAAAATGAATCCTTCATATTGGAGATATGATATGGTTAAATCACGACCTTCCCCTCAACGTAGCTTTCGTGTCAAAGTTGTGCAAGATACCGAAGGTCCTAGTAGGATAGTTGATATCATTAGACTCGTGCCTGAGCTCTCAAGAAATTACTTTAGAAGTCCTTCGAGGAGAGCCCTTTTTGGATGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAAAATATCTCATTGTCATTTGGAGCTTTTGGAGTAAATGATGTTTTTGCTACTGTGGTATGCATTCTCCTCACCGATGTTTCAATTTTATTACAATCGACCAAAGGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGTTTCACTTGTGGTCTTTTCATTGATGCTTTCAAACTTGCTAGTTAACAGCACTTGAAAAAACCATTCTGGTGGTAGCTATAGCATTTCCATTTGTAAAGTTCTTTGAGCGATAATTTTGGTTTTACTCTCTATCTGTACAGCTTGTTCTAATTCTTTTTGTTGAATTTTTTTCCATTTTCCCCTTTGTTTCTTCTGTATATTTTCAACATACGGTTTTCATTGGAGAGTTAAATGTTCTATACACCCTCAAATCAAATATAGTAACAAATTTGAATGTAATTGATGACTTTTAAGAGTTTAATTTTTGTTTGTGTATTGAAATGCATCCCTTGCAATGGAGAATTGTTTGGAAACCATGAATCCAGTGTTGACTATCAGCGACAAATTTAAGATGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACACTGAAGTCATGTTCTCTAATGTAGAGGAAGTCCTTGTGGTTGAAGAAGCTCAGCCAACTGAAACAAATCATTGCACAAGAGAAGAAGTTGAACCAAAACAAGCTACCAAAAAGGAGTTGAAGCCCATTGCCTGTGTACATAAGATCCTTATATTTAACTTGATTCTGTTGTCCCAAAGCTCAATATCTTAGTGCATTAAAGGGACTAGTGTTTTCATATATGTATATATTGAGCTGTAAGTTTATGTATATGTAGATGCAATGGGACAGATAAGCTAAGAATTTAGATGAGTTGTCGGTAGTCATCCAAGAAGAACAAATATAGAGAATCATGAAGTTTGTAAAACAAAACAACCTTGAATGTTTGGTTTGTATTGTGAATTATCTATGCCTCTTTCTCCTTTCTAGTTTTAATGATTTTCTTTTTTATTCCAATT

Coding sequence (CDS)

ATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCAAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGTGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTCGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATATGTGCTTCTGGTACCAAAACATCCCTGTGTTGA

Protein sequence

MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSICASGTKTSLC
BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_004139567.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_011654198.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_011654204.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >KGN64877.1 hypothetical protein Csa_1G144300 [Cucumis sativus])

HSP 1 Score: 959.5 bits (2479), Expect = 4.3e-276
Identity = 481/483 (99.59%), Postives = 482/483 (99.79%), Query Frame = 0

Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSI 484
           TS+
Sbjct: 481 TSM 483

BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_008462173.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462181.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462189.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902994.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902996.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])

HSP 1 Score: 910.6 bits (2352), Expect = 2.3e-261
Identity = 458/483 (94.82%), Postives = 469/483 (97.10%), Query Frame = 0

Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSI 484
           TS+
Sbjct: 481 TSM 483

BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_022153119.1 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Momordica charantia] >XP_022153120.1 pentatricopeptide repeat-containing protein At2g01860 isoform X2 [Momordica charantia])

HSP 1 Score: 783.5 bits (2022), Expect = 4.2e-223
Identity = 396/491 (80.65%), Postives = 432/491 (87.98%), Query Frame = 0

Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MD I S++ VSSI+VKGNGGI CQ +M  F AN+RRR PKNLL PRR KLPP+P VNQF 
Sbjct: 1   MDCIFSSSIVSSIMVKGNGGISCQISMARFMANARRRLPKNLLNPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQ------DEHEEIHAHDY---TKDTDVVWDSDEIEAISSL 120
            N TS   P FTD  SS+  +      D+HEE    +Y    KD +++WDSDEIEAISSL
Sbjct: 61  KNTTSGSGPSFTDFTSSEKIEFPEEEHDDHEEADTENYFVDDKDGEIIWDSDEIEAISSL 120

Query: 121 FQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLI 180
           FQGRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIR  T V SRA LSKQVYKRPDFLI
Sbjct: 121 FQGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRARTGVPSRASLSKQVYKRPDFLI 180

Query: 181 GLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRL 240
           GLAR IRDLS EENVSKVLNRW PFL KGSLSLTI+ELGHMGL DRAL +FCWAQEQ RL
Sbjct: 181 GLARAIRDLSREENVSKVLNRWAPFLLKGSLSLTIRELGHMGLADRALQSFCWAQEQPRL 240

Query: 241 FPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVA 300
           FPDDRVLASTVEVLSRNHELKVP+NLEEFT+LASRGVLEAM+RGFI+GGSLNLAWKLLV 
Sbjct: 241 FPDDRVLASTVEVLSRNHELKVPLNLEEFTRLASRGVLEAMIRGFIKGGSLNLAWKLLVV 300

Query: 301 AKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRL 360
           AKKG RMLDPSVYVKLILELGKNPDKNMLVLTLL+ELGQREALKLNQQD T I+KVCTRL
Sbjct: 301 AKKGNRMLDPSVYVKLILELGKNPDKNMLVLTLLDELGQREALKLNQQDTTAIMKVCTRL 360

Query: 361 GKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAY 420
           GKFEIAE+LY WYVES HEPS+VMYTAL+HSRYS++KYREALS+VWEME+ NCPFDLPAY
Sbjct: 361 GKFEIAERLYGWYVESVHEPSVVMYTALIHSRYSEKKYREALSVVWEMEAANCPFDLPAY 420

Query: 421 SVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAEN 480
           +VVIKLFVALGDLSRA RYFAKLKEAGF+PTY++YRN+ITIYLVSGRLAKCKEIYKEA+N
Sbjct: 421 NVVIKLFVALGDLSRAARYFAKLKEAGFAPTYDIYRNLITIYLVSGRLAKCKEIYKEAKN 480

Query: 481 AGFMMDKQITS 483
           AGF++DKQITS
Sbjct: 481 AGFIIDKQITS 491

BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_022951807.1 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita moschata])

HSP 1 Score: 781.9 bits (2018), Expect = 1.2e-222
Identity = 396/495 (80.00%), Postives = 434/495 (87.68%), Query Frame = 0

Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDS+ S T++SSILVK NGGI CQ  + HF+ NSRRRPPKNLL PRR KLPP+P VNQF 
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSP--PFTDLISSKIF------QDEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
             +TS P P   F DLISS+         DE EE  A +Y      D+DVVWDS+EIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
           FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 HRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKNMLVL LL+ELGQREAL LNQQD + I+KV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
           TRLGKFEIAE+LYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ N PFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420

Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
           PAYSVV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFMMDKQITSI 484
           AENAG++MDKQITS+
Sbjct: 481 AENAGYVMDKQITSM 495

BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_023537574.1 (pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pepo] >XP_023537576.1 pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 780.8 bits (2015), Expect = 2.8e-222
Identity = 394/495 (79.60%), Postives = 432/495 (87.27%), Query Frame = 0

Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDS+ S T++SSILVK NGG+ CQ  M HF+ NSRRRPPKNLL PRR KLPP+P VNQF 
Sbjct: 1   MDSLFSTTTISSILVKRNGGVSCQIPMAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSP--PFTDLISSKIF------QDEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
             +TS P P     DLI S+         DE EE  A +Y      D+D+VWDS+EIEAI
Sbjct: 61  KKRTSGPHPDTSLPDLIPSEKIGPPEEELDELEETAADNYFANDDNDSDIVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
           FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 HRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKNMLVL LL+ELGQREAL LNQQD + I+KV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
           TRLGKFEIAE+LYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+  CPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAKCPFDL 420

Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
           PAYSVVIKLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFMMDKQITSI 484
           AENAG++MDKQITS+
Sbjct: 481 AENAGYVMDKQITSM 495

BLAST of CsGy1G014140 vs. TAIR10
Match: AT2G01860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 453.4 bits (1165), Expect = 1.8e-127
Identity = 247/465 (53.12%), Postives = 316/465 (67.96%), Query Frame = 0

Query: 17  GNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLIS 76
           GN G+   N     + N  ++  KNL  PRR KLPP+  VN F       P         
Sbjct: 23  GNIGVTRVNAS---QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP--------- 82

Query: 77  SKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHK 136
             +                    W+ +EIEAISSLFQ RIPQKP K +R RPLPL     
Sbjct: 83  -LVIXXXXXXXXXXXXXXXXXXXWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPL---XX 142

Query: 137 LRPPRLPNPKIRPTTVVSSRAL--LSKQVYKRPDFLIGLAREIRDL-SPEENVSKVLNRW 196
                          ++ S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN+W
Sbjct: 143 XXXXXXXXXXXXXXNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKW 202

Query: 197 GPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKV 256
             FL+KGSLS TI+ELGHMGLP+RAL T+ WA++   L PD+R+LAST++VL+++HELK+
Sbjct: 203 VSFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL 262

Query: 257 PVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGK 316
              L+    LAS+ V+EAM++G I GG LNLA KL++ +K   R+LD SVYVK+ILE+ K
Sbjct: 263 ---LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAK 322

Query: 317 NPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSI 376
           NPDK  LV+ LLEEL +RE LKL+QQDCT+I+K+C +LG+FE+ E L+ W+  S  EPS+
Sbjct: 323 NPDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSV 382

Query: 377 VMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAK 436
           VMYT ++HSRYS++KYREA+S+VWEME  NC  DLPAY VVIKLFVAL DL RA+RY++K
Sbjct: 383 VMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSK 442

Query: 437 LKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDK 479
           LKEAGFSPTY++YR+MI++Y  SGRL KCKEI KE E+AG  +DK
Sbjct: 443 LKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDK 468

BLAST of CsGy1G014140 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 3.3e-12
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0

Query: 342 TTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMES 401
           T ++ V    G+   A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 402 GNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAK 461
                D   ++ VI  F   G++  AV+   K+KE G +PT + Y  +I  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 462 CKEI 466
             E+
Sbjct: 169 SSEL 172

BLAST of CsGy1G014140 vs. TAIR10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-07
Identity = 61/258 (23.64%), Postives = 115/258 (44.57%), Query Frame = 0

Query: 202 LSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFT 261
           +S++ +E  +    D++ NT    +E  +     + L +  +V  R+ +    +  ++ T
Sbjct: 30  ISISPREPNYAITSDKSNNTSLSLRETRQ----SKWLINAEDVNERDSK---EIKEDKNT 89

Query: 262 KLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILE--LGKNPDKNM 321
           K+ASR  +  ++R          A K ++  KKG + L P   ++ + E       +  +
Sbjct: 90  KIASRKAISIILR--------REATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAI 149

Query: 322 LVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIV---MY 381
            V  LL     RE L   + +    VK+   LGK +  EK +  + E  +E  +V   +Y
Sbjct: 150 QVFELL-----REQL-WYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 209

Query: 382 TALVHSRYSDRKYREALSLVWEMESG-NCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLK 441
           TALV +     ++  A +L+  M+S  NC  D+  YS++IK F+ +    +     + ++
Sbjct: 210 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 266

Query: 442 EAGFSPTYNVYRNMITIY 454
             G  P    Y  +I  Y
Sbjct: 270 RQGIRPNTITYNTLIDAY 266

BLAST of CsGy1G014140 vs. TAIR10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 46.2 bits (108), Expect = 6.7e-05
Identity = 37/160 (23.12%), Postives = 69/160 (43.12%), Query Frame = 0

Query: 335 KLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVM----YTALVHSRYSDRKYR 394
           +L + D  ++VK     G +E A  L+ W V S +  ++ +        V     + +Y 
Sbjct: 133 ELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYS 192

Query: 395 EALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMI 454
            A  L+ ++       D+ AY+ ++  +   G   +A+  F ++KE G SPT   Y  ++
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252

Query: 455 TIYLVSGR-LAKCKEIYKEAENAGFMMDK----QITSICA 486
            ++   GR   K   +  E  + G   D+     + S CA
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACA 292

BLAST of CsGy1G014140 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 2.0e-04
Identity = 32/129 (24.81%), Postives = 59/129 (45.74%), Query Frame = 0

Query: 344 IVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGN 403
           ++ +  ++ +F++A  L         E SI  +T L+          EA+     ME   
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216

Query: 404 CPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCK 463
           C  D  A+S+VI         S A  +F  LK+  F P   VY N++  +  +G +++ +
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAE 276

Query: 464 EIYKEAENA 473
           +++KE + A
Sbjct: 277 KVFKEMKLA 284

BLAST of CsGy1G014140 vs. Swiss-Prot
Match: sp|Q5XET4|PP142_ARATH (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX=3702 GN=EMB975 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 3.3e-126
Identity = 247/465 (53.12%), Postives = 316/465 (67.96%), Query Frame = 0

Query: 17  GNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLIS 76
           GN G+   N     + N  ++  KNL  PRR KLPP+  VN F       P         
Sbjct: 23  GNIGVTRVNAS---QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP--------- 82

Query: 77  SKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHK 136
             +                    W+ +EIEAISSLFQ RIPQKP K +R RPLPL     
Sbjct: 83  -LVIXXXXXXXXXXXXXXXXXXXWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPL---XX 142

Query: 137 LRPPRLPNPKIRPTTVVSSRAL--LSKQVYKRPDFLIGLAREIRDL-SPEENVSKVLNRW 196
                          ++ S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN+W
Sbjct: 143 XXXXXXXXXXXXXXNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKW 202

Query: 197 GPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKV 256
             FL+KGSLS TI+ELGHMGLP+RAL T+ WA++   L PD+R+LAST++VL+++HELK+
Sbjct: 203 VSFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL 262

Query: 257 PVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGK 316
              L+    LAS+ V+EAM++G I GG LNLA KL++ +K   R+LD SVYVK+ILE+ K
Sbjct: 263 ---LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAK 322

Query: 317 NPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSI 376
           NPDK  LV+ LLEEL +RE LKL+QQDCT+I+K+C +LG+FE+ E L+ W+  S  EPS+
Sbjct: 323 NPDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSV 382

Query: 377 VMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAK 436
           VMYT ++HSRYS++KYREA+S+VWEME  NC  DLPAY VVIKLFVAL DL RA+RY++K
Sbjct: 383 VMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSK 442

Query: 437 LKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDK 479
           LKEAGFSPTY++YR+MI++Y  SGRL KCKEI KE E+AG  +DK
Sbjct: 443 LKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDK 468

BLAST of CsGy1G014140 vs. Swiss-Prot
Match: sp|Q8GZ63|PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 6.0e-11
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0

Query: 342 TTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMES 401
           T ++ V    G+   A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 402 GNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAK 461
                D   ++ VI  F   G++  AV+   K+KE G +PT + Y  +I  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 462 CKEI 466
             E+
Sbjct: 169 SSEL 172

BLAST of CsGy1G014140 vs. Swiss-Prot
Match: sp|Q9FKC3|PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 4.5e-06
Identity = 61/258 (23.64%), Postives = 115/258 (44.57%), Query Frame = 0

Query: 202 LSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFT 261
           +S++ +E  +    D++ NT    +E  +     + L +  +V  R+ +    +  ++ T
Sbjct: 30  ISISPREPNYAITSDKSNNTSLSLRETRQ----SKWLINAEDVNERDSK---EIKEDKNT 89

Query: 262 KLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILE--LGKNPDKNM 321
           K+ASR  +  ++R          A K ++  KKG + L P   ++ + E       +  +
Sbjct: 90  KIASRKAISIILR--------REATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAI 149

Query: 322 LVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIV---MY 381
            V  LL     RE L   + +    VK+   LGK +  EK +  + E  +E  +V   +Y
Sbjct: 150 QVFELL-----REQL-WYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 209

Query: 382 TALVHSRYSDRKYREALSLVWEMESG-NCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLK 441
           TALV +     ++  A +L+  M+S  NC  D+  YS++IK F+ +    +     + ++
Sbjct: 210 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 266

Query: 442 EAGFSPTYNVYRNMITIY 454
             G  P    Y  +I  Y
Sbjct: 270 RQGIRPNTITYNTLIDAY 266

BLAST of CsGy1G014140 vs. TrEMBL
Match: tr|A0A0A0LVM0|A0A0A0LVM0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1)

HSP 1 Score: 959.5 bits (2479), Expect = 2.9e-276
Identity = 481/483 (99.59%), Postives = 482/483 (99.79%), Query Frame = 0

Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSI 484
           TS+
Sbjct: 481 TSM 483

BLAST of CsGy1G014140 vs. TrEMBL
Match: tr|A0A1S3CGD0|A0A1S3CGD0_CUCME (pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN=LOC103500594 PE=4 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 1.5e-261
Identity = 458/483 (94.82%), Postives = 469/483 (97.10%), Query Frame = 0

Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSI 484
           TS+
Sbjct: 481 TSM 483

BLAST of CsGy1G014140 vs. TrEMBL
Match: tr|A0A2N9HFH8|A0A2N9HFH8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38191 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.0e-168
Identity = 303/455 (66.59%), Postives = 371/455 (81.54%), Query Frame = 0

Query: 32  ANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHD 91
           ++++RR PKNL  PR  KLPP+  VN F   KT+ PS   TDLI+S + ++  E+     
Sbjct: 33  SSTKRRLPKNLRYPRSTKLPPDFGVNLFLKKKTTDPS--LTDLINSHLAEEGEEDTQ--- 92

Query: 92  YTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTT 151
             +DT +VWDSDEIEAISSLF+GRIPQKPGKLNR+RPL     +KLRP  LP PK    +
Sbjct: 93  -EEDTGIVWDSDEIEAISSLFRGRIPQKPGKLNRQRPLXXXXXYKLRPAGLPAPKKHVKS 152

Query: 152 V----VSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIK 211
           V    +SSRA LSKQ+YK P  LIG+AREI+ LS EE+VS +LN+W  FL+KGSLSLTI+
Sbjct: 153 VSPSALSSRASLSKQLYKNPGVLIGIAREIKSLSSEEDVSVILNKWASFLRKGSLSLTIR 212

Query: 212 ELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRG 271
           ELGHMGLP+RAL TFCWAQ+Q +LFPDDR+LASTVEVL+RNHELKVP NLE+FT LASRG
Sbjct: 213 ELGHMGLPERALKTFCWAQKQPQLFPDDRILASTVEVLARNHELKVPFNLEKFTALASRG 272

Query: 272 VLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEE 331
           V+EAM+RGFIRGGSL+LA K+L+ AK GKRMLD SVY KLILELGKNPDK +LV+ LL+E
Sbjct: 273 VIEAMVRGFIRGGSLHLARKVLLIAKHGKRMLDSSVYAKLILELGKNPDKQLLVVALLDE 332

Query: 332 LGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDR 391
           LG+R+   L+QQDCT I+KVC RL KF+I E L++W+ +SGH+PS+VMYT L+HSRYS++
Sbjct: 333 LGERDDFNLSQQDCTAIMKVCIRLRKFDIVESLFNWFKQSGHDPSVVMYTTLIHSRYSEK 392

Query: 392 KYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYR 451
           KYREAL++VWEME+ NC FDLPAY VVI+LFVAL DLSRAVRYF+KLKEAGF PTY++YR
Sbjct: 393 KYREALAVVWEMEASNCLFDLPAYRVVIRLFVALSDLSRAVRYFSKLKEAGFCPTYDLYR 452

Query: 452 NMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITS 483
           ++I IY++SGRLAKCKE+ KEA  AGF +DK+ TS
Sbjct: 453 DLIKIYMISGRLAKCKEVCKEAGQAGFKLDKETTS 481

BLAST of CsGy1G014140 vs. TrEMBL
Match: tr|A0A2I4GWH4|A0A2I4GWH4_9ROSI (pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Juglans regia OX=51240 GN=LOC109011476 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.0e-164
Identity = 303/476 (63.66%), Postives = 366/476 (76.89%), Query Frame = 0

Query: 31  KANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEI--- 90
           ++ +RRRPPKNL  PR  K PPN  VN F   KTS  S   TD+  + +   +   +   
Sbjct: 30  RSKTRRRPPKNLRYPRHPKSPPNFGVNLFL-KKTSTNS---TDISLAYLIDGKKPRLAGK 89

Query: 91  --------------HAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPL 150
                               ++T + WDSDEIEAISSLFQGR+PQKPGKLNRERPL    
Sbjct: 90  KGXXXXXXXXXXXXXXXXXRQETGICWDSDEIEAISSLFQGRVPQKPGKLNRERPLXXXX 149

Query: 151 PHKLRPPRLPNPKIRPTT----VVSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKV 210
            +KL P  LP PK    +    VVSSRA LSKQVYK P  LIG+AREI+ +S EE+VS V
Sbjct: 150 XYKLXPLGLPTPKKHVKSASPLVVSSRASLSKQVYKNPGVLIGIAREIKMISSEEDVSVV 209

Query: 211 LNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNH 270
           LN+W  FL+KGSLSLTI+ELGHMGLP+RAL TFCWAQ+Q +LFPDDR+LASTVEVL+RNH
Sbjct: 210 LNKWARFLRKGSLSLTIRELGHMGLPERALQTFCWAQKQTQLFPDDRILASTVEVLARNH 269

Query: 271 ELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLIL 330
           ELKVP  L +FT LASRGV+EAM+RGFIRGGSL+LAWKLL  A+ GKRMLDPS+Y KLIL
Sbjct: 270 ELKVPFKLGKFTSLASRGVMEAMVRGFIRGGSLHLAWKLLSVARDGKRMLDPSIYAKLIL 329

Query: 331 ELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGH 390
           ELGKNPDK+MLV++LL+ELG+RE L L+QQDCT I+K+C RLGKF++ + L++W+ +SG+
Sbjct: 330 ELGKNPDKHMLVVSLLDELGEREDLNLSQQDCTAIMKICIRLGKFDVVDGLFNWFKQSGY 389

Query: 391 EPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVR 450
           EPS+VMYT L+HS YS+RKYREAL+LVWEME+ NC  DLPAY VVIKLFVAL D+SRAVR
Sbjct: 390 EPSVVMYTTLIHSHYSERKYREALALVWEMEASNCLLDLPAYRVVIKLFVALNDISRAVR 449

Query: 451 YFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSICA 486
           YF+KLKEAGFSPTY++YR +I IY+VSGRLAKCKE+ KEAE AGF +DK   ++ A
Sbjct: 450 YFSKLKEAGFSPTYDMYRELIKIYMVSGRLAKCKEVCKEAEIAGFKLDKDNVTVVA 501

BLAST of CsGy1G014140 vs. TrEMBL
Match: tr|A0A2I4GWH7|A0A2I4GWH7_9ROSI (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Juglans regia OX=51240 GN=LOC109011476 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.0e-164
Identity = 303/476 (63.66%), Postives = 366/476 (76.89%), Query Frame = 0

Query: 31  KANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEI--- 90
           ++ +RRRPPKNL  PR  K PPN  VN F   KTS  S   TD+  + +   +   +   
Sbjct: 84  RSKTRRRPPKNLRYPRHPKSPPNFGVNLFL-KKTSTNS---TDISLAYLIDGKKPRLAGK 143

Query: 91  --------------HAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPL 150
                               ++T + WDSDEIEAISSLFQGR+PQKPGKLNRERPL    
Sbjct: 144 KGXXXXXXXXXXXXXXXXXRQETGICWDSDEIEAISSLFQGRVPQKPGKLNRERPLXXXX 203

Query: 151 PHKLRPPRLPNPKIRPTT----VVSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKV 210
            +KL P  LP PK    +    VVSSRA LSKQVYK P  LIG+AREI+ +S EE+VS V
Sbjct: 204 XYKLXPLGLPTPKKHVKSASPLVVSSRASLSKQVYKNPGVLIGIAREIKMISSEEDVSVV 263

Query: 211 LNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNH 270
           LN+W  FL+KGSLSLTI+ELGHMGLP+RAL TFCWAQ+Q +LFPDDR+LASTVEVL+RNH
Sbjct: 264 LNKWARFLRKGSLSLTIRELGHMGLPERALQTFCWAQKQTQLFPDDRILASTVEVLARNH 323

Query: 271 ELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLIL 330
           ELKVP  L +FT LASRGV+EAM+RGFIRGGSL+LAWKLL  A+ GKRMLDPS+Y KLIL
Sbjct: 324 ELKVPFKLGKFTSLASRGVMEAMVRGFIRGGSLHLAWKLLSVARDGKRMLDPSIYAKLIL 383

Query: 331 ELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGH 390
           ELGKNPDK+MLV++LL+ELG+RE L L+QQDCT I+K+C RLGKF++ + L++W+ +SG+
Sbjct: 384 ELGKNPDKHMLVVSLLDELGEREDLNLSQQDCTAIMKICIRLGKFDVVDGLFNWFKQSGY 443

Query: 391 EPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVR 450
           EPS+VMYT L+HS YS+RKYREAL+LVWEME+ NC  DLPAY VVIKLFVAL D+SRAVR
Sbjct: 444 EPSVVMYTTLIHSHYSERKYREALALVWEMEASNCLLDLPAYRVVIKLFVALNDISRAVR 503

Query: 451 YFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSICA 486
           YF+KLKEAGFSPTY++YR +I IY+VSGRLAKCKE+ KEAE AGF +DK   ++ A
Sbjct: 504 YFSKLKEAGFSPTYDMYRELIKIYMVSGRLAKCKEVCKEAEIAGFKLDKDNVTVVA 555

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004139567.14.3e-27699.59PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativu... [more]
XP_008462173.12.3e-26194.82PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] ... [more]
XP_022153119.14.2e-22380.65pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Momordica char... [more]
XP_022951807.11.2e-22280.00pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita mosc... [more]
XP_023537574.12.8e-22279.60pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pep... [more]
Match NameE-valueIdentityDescription
AT2G01860.11.8e-12753.12Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G25630.23.3e-1228.23Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48730.12.5e-0723.64Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G18940.16.7e-0523.13Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G20300.12.0e-0424.81Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q5XET4|PP142_ARATH3.3e-12653.12Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX... [more]
sp|Q8GZ63|PP397_ARATH6.0e-1128.23Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX... [more]
sp|Q9FKC3|PP424_ARATH4.5e-0623.64Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LVM0|A0A0A0LVM0_CUCSA2.9e-27699.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1[more]
tr|A0A1S3CGD0|A0A1S3CGD0_CUCME1.5e-26194.82pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2N9HFH8|A0A2N9HFH8_FAGSY2.0e-16866.59Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38191 PE=4 SV=1[more]
tr|A0A2I4GWH4|A0A2I4GWH4_9ROSI3.0e-16463.66pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Juglans regi... [more]
tr|A0A2I4GWH7|A0A2I4GWH7_9ROSI3.0e-16463.66pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Juglans regi... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G014140.1CsGy1G014140.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 395..452
e-value: 0.0017
score: 18.3
coord: 330..380
e-value: 0.011
score: 15.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 410..442
e-value: 0.001
score: 17.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 442..476
score: 7.092
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 372..406
score: 7.487
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..371
score: 8.813
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 5.382
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 407..441
score: 9.986
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 173..316
e-value: 1.6E-5
score: 26.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 317..491
e-value: 4.0E-26
score: 94.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..148
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 27..484
NoneNo IPR availablePANTHERPTHR24015:SF642SUBFAMILY NOT NAMEDcoord: 27..484