MELO3C004826.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004826.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Pentatricopeptide repeat-containing protein At2g01860
Location	chr12 : 9373959 .. 9379678 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGCCTCTCAATCTCTATTCTCAGGTTGCATCTTTCTCACTCAGCTCAGTAACTCACCTTCACGACTTCATCCTCACGGCGGCCGTCGCTCCACCTCTCCATTGCTCATTATCCCACTCTCAGATTTTCACCTCTCTTGACTCAGACTCACGTTCACGTCCTCCACCAGTGACCGACTACCGCTCCTCCTCTGTCTCACGCTCACCCCTCTGACTCTCACCTCACGGCTCCAAATCGCAGAGAGCCGTCCATTAAAACGGTTTTTGCAGCTTTTTTCTCCCTTCAGTTCCCCTCTTGAATAGAAGATTCTTGTGGGCATTTGTTGCTTTGAAGAATATCTTCAAAATTTGAATCTTATAATCAATTTTATTTATGGTATGGCTTCTTCTGTTGTCTTTCATCATTGTGTTGCCTTGAAGTATGTTCCTCAAAATACAAGTTTGAAAATGTCTATCGGACTTTGTTCCATTTCGTACTTCACATATGTTTTCAGTATTGTTTATAGTCTGCTGCACTGCATTCTTGTTATTTCTGGGGTAGTCGAACAAATCCAAACCATGGTGGATTTGTGTGTCTTTTATTAAGTTAGAGTTGAAGTGTTTGGTGCAGATAGTTATTTTATATGTCATTTTCTTGTGAAATTCATGGTTGTTTCTTCCATAGGACAAATTCGAAGCAAGGCCAAGGAGCTAGAGGAAGAAGCTAGAACGAGACCAAGGGGCTACAATGTATAAAAGAGACGAGAGAGAGAGAAGACCGAAGGGAAACAGAATGTATCATTGATGCTACAAATTGGATAGGTTCATGTAGTTTTGTTGTCACTTGTAAGGTCAAGTTTTGGTAGAAAACTATTTTGATAACCCCGTGGAGTCTTTACTTTGCACCTTCAAAGCTTCGCTCTCAGAATTATGCATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGATTACGATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTGACCCTGCCGTCAACCAATTCTTGAACAACAAAACCTCTGCCCCTTCCCCATCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTTATGATTATACCAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATCCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTGCCACACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAACGGTGTCTTCGCGTGCTTTGCTGTCTAAGAAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGCGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAGGAACAACGTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCACGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTGGAGGCAATGATGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTGCGAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGAAGAGCTAGGACAAAGAGAAGCCTTGAAGTTGAACCAACAAGATAGTACAACTATAATTAAGGTCTGCACAAGGCTTCGTAAATTTGAAATTGCTGAGAAACTTTATTGCTGGTATGTTGAATCTGGACATGAACCGAGTATGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAATGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATGATGTATATCGGAATATGATCACCATTTATTTAGTTTCAGGGAGGTTAGCCAAGTCTAAGGAAATTTATAAGGAAGCGGAGAATGCTGGATTTATCATGGATAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGATTCACCTGTGGCAAGAGATTTTTTTATCTATCACCGAGTTGCACCATCAGTTTGCATATCATCGAGTAGGTGAGTTGCTTTCAATGTATTGGAATTGCATTTCATCTGCACTAAATAAATTGTTAACGAATATTCTTTGTTTTCCCTAATCTACCACGTTCATATTGATTGCTCGATGGACAGATGCCATGTGCATGTGGTTGTGTATGGCAGTCCGGGTGCTTGTGTGTTTCAATAAAGAAAATTTATTGGTTGTCCTTTCTACTTAACCGTTAAATCATGGCATCTAACCTATGAATTTCAATAGTACATCTTAGAAAGTACTTGGTTTTTTGCTTCTGGATGTGTATACATACATATGATTCACATAATGTCTTATGGACTTCTTTTTTTGTTTGTTTGTTTTTTTCCTTTTGAAAACAAAGCATCAAGCTCAAATGCATTACGCCAGAAAACTCTGATTTGCCCCAATACATTGTGATAGCCAATCCAGCACATCAGTAACCCAACAAGAGGAATCCCGACAAGAAAGAGCAAATTTGGCCAATTTGGGCCTCACTATTGCTCGTTCTGGGCAATTAATTAAAGTGAAAGCATCCTCGTAAATAACCTCATATGCAGTTAAGGAGAAGTCGAAAGAATGTCTCCTGGACTAATAATATACATCATACAAACTCAACGACGATTTTGACATATACTGACCAACAATTCTTATTCTCATCTAGCTTCTATAGATTCTTTGTTCCACTATTCAATGAAGTAACTCAATGCTTTGTCCTTCAAGTGCCTGTTTCTAGATAAGTCTCATAAAAGTGTACCATTCCTGTTGTAGTTATAGTCATTACAGTTGTGCTTCTGGTACCAAAACATCCCTGTTGCTGTTTCTAGTGGTTGAGAAGGTTTGAATTACATATTGCTGTTTCTAGTGGTTATGCTGTATCTGTTTATGACTTTGTGAACATAATCTCAGGCATATGATATTTGCATTTCAAAAAATCTTTTTGGGAGCAGGTCTCTATTCCTGGAAGAATGGGAAACGCAAAACAAGCCCTTGCTGTCATCATTGATAAATTAGGAGATATAGAAGAGGTACTGGCATTATCTTTTGACTGAAGGCAGTTTGGCTTCCAGATAGCACGCAAATTTGCATTTGAGTTCTCTTTTCGCTTTTGAGTTGTGGTTACGAACTAGTTATAAAATCTTGTTGTCATCATGGACAGGCAGTGGAGTTTGTTAGTCTCCAACATGATGATGAGCTCTGGGCAGAACTGATAAAGCTGTCTTCACAAGGCTGAAATGGTATCAATAAGTGCTCTTCTCTTATTGTCTAATTTTCCATACACTGATTTATTTTTAAGGGTTTGTCCTCTATTATTGTCAGCTTGGCATGTTATTGGAGCACACAGTTGGCAATCTATATCCTCTTTGTATTGTCAACATGGTTCCTGATGGTTTAGAGATACCTTGCTTTTCTTCATTTTCTGAAATCTTTAGTTTTCAATTTCTGTGGTGTTTATATCTGTTGTCTTTCTATTGCAAGTGGCATATATCCCTTTAAAAGGAACTGTGTTTCCCTTTCACTTGTATAATTCTATTTATTTAATGTTTTAATGTTGTCCAGCCTAGAATTACGTTAGTGGTGGGTTAGAAATCCAGGTCTATCACAATTCACAGTGCTTCTTCTTAAAACTACTTGAATGAATTCTGTAGTTGCTCCACCTTTCTATATTCTTAATTTTGGAAACGATTTGTATTTCCTGATTTGGTCTTGGTCATGTCTTTTATTGCACAAAATCCTCAGCATATTAAACTACTTCAAAAATTTTAGTCCTTGGGGCTATCGCTTCTCTTCTCTGAGACAACAGGTTGTGCATAGCATATAGCACTTATACTATTTGTTACTGGCAAAAAGTAGTAAAGAAAACCACATGGGAATCGGATCTTGGCGTTTTTTGTCGAATCAGCTAATGATTTCATATCGTTTTTTGATAATGCATGGTTTTGTATTGTTTATTGATAATGTCTCGTGTATTTATTCTTCTGTTGTCATTAATTTCTGCACAATTTACAAGGTTACTATTTATACGGTTAGTGTTTTGTAATGTGCGCCTATACTCAGTCCATGTAATCTCTGTTTGAAATTGTCTTAAGCTGTTTGTAGTTGATTTTTGATGCATTAAAACTGGGTTATCATCTTTCTTGCTACTTCCAGATATTTTTTTCTCAGATTTTTTAATTCTCTGACAGGTTGTGTCACAACGAGTCAGGAAACTAAGCATTTTAACCACCAGTTTTGTTGTCAGATTACAGGTTGCGCCTGCATTTAAACAAATTGAACGTATGTGAAATTAGATTTATCATTCGTATTTGGATGTTCATTGGTCTAATATCCTTCCCTTGTGTCTATTTCAGCCTCCGGGATCGGCTAGTTAAAATCATTACTGATTACAGGACGGAAACCAGTCTTAGACATGGATGCAATGATATTTTAAAGGTATTTTCATGCGAGTTATTAATTTTCTTGCTTCACTAGAACTGAGCCTTGTGCTATCAAGATAGTAATGCGTGATTTCTAACAGCCCGACACTGAGTCTACTCGTTAAGTACTACAAATAGGCCAGACATGGAATTTACTTGAGCAATGAAGAAGATGAAGTACATGGGAAGAGGAATGGAAATAAGGTTTCTCGATCAATTAAAAACCTTCAAATGTTAAAATGATGGAGGTTTAAGTAGAAAACTCGGGGAGGCACTCGAGGCTCATATGATCCATTTTTAATACAAAACATATCCGTCGTCCTGTTCTTTTGCTGCCATGTGTATCACGAGACTTGTCTCATAGAATCAACCTCCAATCTTGATGCTAAGAAAGGGACTGGAGACATAGAGGATGACGAAGACGGTGAGGACAATACAGATGTGGGCCAACTGCTTCTTCCGAGACTTGACAATGCTTTGTGCCATCATGGTTTTCGTTATTTTTCTTCGTCTTTGTTGGGCTTTTTGAATTTGTTTATGAGCATGCTAATATGTACAGGCCATCGTCCCTTTCCTCGCATCGCTATTTGTTACTCTTTTTTTTCCTTTTATCAAAGTCTCTATAATTAGTTGGAAGATTTTGGTTGATGGGTTGTATCCATTTTCTTTTTCATACAAAGCTTTTTAAGTTATGCCCAGGTTTGTAGTCGAGTTTTGTTAGGTTAGCTGATTTATAAATTACAAAAGGTAATCAACATTTGTATATTTCTTTTTTCAACTTCAGTTCTTCTGAGAATTGTAACCTCTTATAATCTCAATAATATATATTCATGAATAATATCTGTGACGAAAAGTGCATCCGA

mRNA sequence

ACGGCCTCTCAATCTCTATTCTCAGGTTGCATCTTTCTCACTCAGCTCAGTAACTCACCTTCACGACTTCATCCTCACGGCGGCCGTCGCTCCACCTCTCCATTGCTCATTATCCCACTCTCAGATTTTCACCTCTCTTGACTCAGACTCACGTTCACGTCCTCCACCAGTGACCGACTACCGCTCCTCCTCTGTCTCACGCTCACCCCTCTGACTCTCACCTCACGGCTCCAAATCGCAGAGAGCCGTCCATTAAAACGGTTTTTGCAGCTTTTTTCTCCCTTCAGTTCCCCTCTTGAATAGAAGATTCTTGTGGGCATTTGTTGCTTTGAAGAATATCTTCAAAATTTGAATCTTATAATCAATTTTATTTATGGACAAATTCGAAGCAAGGCCAAGGAGCTAGAGGAAGAAGCTAGAACGAGACCAAGGGGCTACAATGTATAAAAGAGACGAGAGAGAGAGAAGACCGAAGGGAAACAGAATGTATCATTGATGCTACAAATTGGATAGGTTCATGTAGTTTTGTTGTCACTTGTAAGGTCAAGTTTTGGTAGAAAACTATTTTGATAACCCCGTGGAGTCTTTACTTTGCACCTTCAAAGCTTCGCTCTCAGAATTATGCATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGATTACGATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTGACCCTGCCGTCAACCAATTCTTGAACAACAAAACCTCTGCCCCTTCCCCATCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTTATGATTATACCAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATCCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTGCCACACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAACGGTGTCTTCGCGTGCTTTGCTGTCTAAGAAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGCGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAGGAACAACGTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCACGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTGGAGGCAATGATGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTGCGAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGAAGAGCTAGGACAAAGAGAAGCCTTGAAGTTGAACCAACAAGATAGTACAACTATAATTAAGGTCTGCACAAGGCTTCGTAAATTTGAAATTGCTGAGAAACTTTATTGCTGGTATGTTGAATCTGGACATGAACCGAGTATGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAATGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATGATGTATATCGGAATATGATCACCATTTATTTAGTTTCAGGGAGGTTAGCCAAGTCTAAGGAAATTTATAAGGAAGCGGAGAATGCTGGATTTATCATGGATAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGATTCACCTGTGGCAAGAGATTTTTTTATCTATCACCGAGTTGCACCATCAGTTTGCATATCATCGAGTAGCATCAAGCTCAAATGCATTACGCCAGAAAACTCTGATTTGCCCCAATACATTGTGATAGCCAATCCAGCACATCAGTAACCCAACAAGAGGAATCCCGACAAGAAAGAGCAAATTTGGCCAATTTGGGCCTCACTATTGCTCGTTCTGGGCAATTAATTAAAGTGAAAGCATCCTCGTAAATAACCTCATATGCAGTTAAGGAGAAGTCGAAAGAATGTCTCCTGGACTAATAATATACATCATACAAACTCAACGACGATTTTGACATATACTGACCAACAATTCTTATTCTCATCTAGCTTCTATAGATTCTTTGTTCCACTATTCAATGAAGTAACTCAATGCTTTGTCCTTCAAGTGCCTGTTTCTAGATAAGTCTCATAAAAGTGTACCATTCCTGTTGTAGTTATAGTCATTACAGTTGTGCTTCTGGTACCAAAACATCCCTGTTGCTGTTTCTAGTGGTTGAGAAGGTCTCTATTCCTGGAAGAATGGGAAACGCAAAACAAGCCCTTGCTGTCATCATTGATAAATTAGGAGATATAGAAGAGGCAGTGGAGTTTGTTAGTCTCCAACATGATGATGAGCTCTGGGCAGAACTGATAAAGCTGTCTTCACAAGGCTGAAATGGTTGTGTCACAACGAGTCAGGAAACTAAGCATTTTAACCACCAGTTTTGTTGTCAGATTACAGCCTCCGGGATCGGCTAGTTAAAATCATTACTGATTACAGGACGGAAACCAGTCTTAGACATGGATGCAATGATATTTTAAAGCCCGACACTGAGTCTACTCGTTAAGTACTACAAATAGGCCAGACATGGAATTTACTTGAGCAATGAAGAAGATGAAGTACATGGGAAGAGGAATGGAAATAAGGTTTCTCGATCAATTAAAAACCTTCAAATGTTAAAATGATGGAGGTTTAAGTAGAAAACTCGGGGAGGCACTCGAGGCTCATATGATCCATTTTTAATACAAAACATATCCGTCGTCCTGTTCTTTTGCTGCCATGTGTATCACGAGACTTGTCTCATAGAATCAACCTCCAATCTTGATGCTAAGAAAGGGACTGGAGACATAGAGGATGACGAAGACGGTGAGGACAATACAGATGTGGGCCAACTGCTTCTTCCGAGACTTGACAATGCTTTGTGCCATCATGGTTTTCGTTATTTTTCTTCGTCTTTGTTGGGCTTTTTGAATTTGTTTATGAGCATGCTAATATGTACAGGCCATCGTCCCTTTCCTCGCATCGCTATTTGTTACTCTTTTTTTTCCTTTTATCAAAGTCTCTATAATTAGTTGGAAGATTTTGGTTGATGGGTTGTATCCATTTTCTTTTTCATACAAAGCTTTTTAAGTTATGCCCAGGTTTGTAGTCGAGTTTTGTTAGGTTAGCTGATTTATAAATTACAAAAGGTAATCAACATTTGTATATTTCTTTTTTCAACTTCAGTTCTTCTGAGAATTGTAACCTCTTATAATCTCAATAATATATATTCATGAATAATATCTGTGACGAAAAGTGCATCCGA

Coding sequence (CDS)

ATGCATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGATTACGATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTGACCCTGCCGTCAACCAATTCTTGAACAACAAAACCTCTGCCCCTTCCCCATCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTTATGATTATACCAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATCCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTGCCACACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAACGGTGTCTTCGCGTGCTTTGCTGTCTAAGAAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGCGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAGGAACAACGTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCACGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTGGAGGCAATGATGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTGCGAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGAAGAGCTAGGACAAAGAGAAGCCTTGAAGTTGAACCAACAAGATAGTACAACTATAATTAAGGTCTGCACAAGGCTTCGTAAATTTGAAATTGCTGAGAAACTTTATTGCTGGTATGTTGAATCTGGACATGAACCGAGTATGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAATGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATGATGTATATCGGAATATGATCACCATTTATTTAGTTTCAGGGAGGTTAGCCAAGTCTAAGGAAATTTATAAGGAAGCGGAGAATGCTGGATTTATCATGGATAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGA

Protein sequence

MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFLNNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQITSMLLQAKR

Homology

[Close]

BLAST of MELO3C004826.2 vs. NCBI nr
Match: XP_008462173.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462181.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462189.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902994.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902996.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])

HSP 1 Score: 966.8 bits (2498), Expect = 2.7e-278
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826.2 vs. NCBI nr
Match: XP_004139567.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_011654198.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_011654204.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >KGN64877.1 hypothetical protein Csa_1G144300 [Cucumis sativus])

HSP 1 Score: 918.3 bits (2372), Expect = 1.1e-263
Identity = 464/489 (94.89%), Postives = 474/489 (96.93%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826.2 vs. NCBI nr
Match: XP_022951807.1 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita moschata])

HSP 1 Score: 793.5 bits (2048), Expect = 4.1e-226
Identity = 406/501 (81.04%), Postives = 444/501 (88.62%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M S+ S T++SSILVK NGGI CQI + HF+ NSRRRPPKNLL PRR KLPPDP VNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSP--SFTDLISSKIF------QDEHEEIHAYDY----TKDTDVVWDSDEIEAI 120
             +TS P P  SF DLISS+         DE EE  A +Y      D+DVVWDS+EIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SK+VYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQ 240
           FLIGLARAIRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 RRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFIKGG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKN+LVL LL+ELGQREAL LNQQD++ IIKV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDL 420
           TRL KFEIAE+LY WYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+AN PFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420

Query: 421 PAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKE 480
           PAY+VV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAK KEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFIMDKQITSMLLQAKR 490
           AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of MELO3C004826.2 vs. NCBI nr
Match: XP_023537574.1 (pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pepo] >XP_023537576.1 pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 792.3 bits (2045), Expect = 9.1e-226
Identity = 404/501 (80.64%), Postives = 442/501 (88.22%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M S+ S T++SSILVK NGG+ CQI M HF+ NSRRRPPKNLL PRR KLPPDP VNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGVSCQIPMAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSP--SFTDLISSKIF------QDEHEEIHAYDY----TKDTDVVWDSDEIEAI 120
             +TS P P  S  DLI S+         DE EE  A +Y      D+D+VWDS+EIEAI
Sbjct: 61  KKRTSGPHPDTSLPDLIPSEKIGPPEEELDELEETAADNYFANDDNDSDIVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SK+VYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQ 240
           FLIGLARAIRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 RRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFIKGG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKN+LVL LL+ELGQREAL LNQQD++ IIKV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDL 420
           TRL KFEIAE+LY WYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+A CPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAKCPFDL 420

Query: 421 PAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKE 480
           PAY+VVIKLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAK KEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFIMDKQITSMLLQAKR 490
           AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of MELO3C004826.2 vs. NCBI nr
Match: XP_022153119.1 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Momordica charantia] >XP_022153120.1 pentatricopeptide repeat-containing protein At2g01860 isoform X2 [Momordica charantia])

HSP 1 Score: 789.3 bits (2037), Expect = 7.7e-225
Identity = 403/495 (81.41%), Postives = 438/495 (88.48%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M  I S++ VSSI+VKGNGGI CQI+M  F AN+RRR PKNLL PRR KLPPDP VNQFL
Sbjct: 1   MDCIFSSSIVSSIMVKGNGGISCQISMARFMANARRRLPKNLLNPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQ------DEHEEIHAYDY---TKDTDVVWDSDEIEAISSL 120
            N TS   PSFTD  SS+  +      D+HEE    +Y    KD +++WDSDEIEAISSL
Sbjct: 61  KNTTSGSGPSFTDFTSSEKIEFPEEEHDDHEEADTENYFVDDKDGEIIWDSDEIEAISSL 120

Query: 121 FQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLI 180
           FQGRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIR  T V SRA LSK+VYKRPDFLI
Sbjct: 121 FQGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRARTGVPSRASLSKQVYKRPDFLI 180

Query: 181 GLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRL 240
           GLARAIRDLS EENVSKVLNRW PFL KGSLSLTI+ELGHMGL DRAL++FCW QEQ RL
Sbjct: 181 GLARAIRDLSREENVSKVLNRWAPFLLKGSLSLTIRELGHMGLADRALQSFCWAQEQPRL 240

Query: 241 FPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVA 300
           FPDDRVLASTVEVLSRNHELKVP+NLEEFT+LASRGVLEAM+RGFIKGGSLNLAWKLLV 
Sbjct: 241 FPDDRVLASTVEVLSRNHELKVPLNLEEFTRLASRGVLEAMIRGFIKGGSLNLAWKLLVV 300

Query: 301 AKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRL 360
           AKKG RMLDPSVYVKLILELGKNPDKN+LVLTLL+ELGQREALKLNQQD+T I+KVCTRL
Sbjct: 301 AKKGNRMLDPSVYVKLILELGKNPDKNMLVLTLLDELGQREALKLNQQDTTAIMKVCTRL 360

Query: 361 RKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAY 420
            KFEIAE+LY WYVES HEPS+VMYTAL+HSRYS++KYREALS+VWEME+ANCPFDLPAY
Sbjct: 361 GKFEIAERLYGWYVESVHEPSVVMYTALIHSRYSEKKYREALSVVWEMEAANCPFDLPAY 420

Query: 421 NVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAEN 480
           NVVIKLFVALGDLSRA RYFAKLKEAGF+PTYD+YRN+ITIYLVSGRLAK KEIYKEA+N
Sbjct: 421 NVVIKLFVALGDLSRAARYFAKLKEAGFAPTYDIYRNLITIYLVSGRLAKCKEIYKEAKN 480

Query: 481 AGFIMDKQITSMLLQ 487
           AGFI+DKQITS LLQ
Sbjct: 481 AGFIIDKQITSRLLQ 495

[Close]

BLAST of MELO3C004826.2 vs. TAIR10
Match: AT2G01860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 443.4 bits (1139), Expect = 1.9e-124
Identity = 248/475 (52.21%), Postives = 322/475 (67.79%), Query Frame = 0


Query: 19  GGIGCQITMVH-FKANSRRRPPKNLLCPRRAKLPPDPAVNQFLNNKTSAPSPSFTDLISS 78
           G IG  +T V+  + N  ++  KNL  PRR KLPPD  VN FL      P          
Sbjct: 23  GNIG--VTRVNASQRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP---------- 82

Query: 79  KIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKL 138
            +                    W+ +EIEAISSLFQ RIPQKP K +R RPLPL      
Sbjct: 83  LVIXXXXXXXXXXXXXXXXXXXWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPL---XXX 142

Query: 139 RPPRLPNPKIRPTTTVSSRAL--LSKKVYKRPDFLIGLARAIRDL-SPEENVSKVLNRWG 198
                          + S AL  +SK+VYK P FLIGLAR I+ L S + +VS VLN+W 
Sbjct: 143 XXXXXXXXXXXXXNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWV 202

Query: 199 PFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKVP 258
            FL+KGSLS TI+ELGHMGLP+RAL+T+ W ++   L PD+R+LAST++VL+++HELK+ 
Sbjct: 203 SFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL- 262

Query: 259 VNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKN 318
             L+    LAS+ V+EAM++G I+GG LNLA KL++ +K   R+LD SVYVK+ILE+ KN
Sbjct: 263 --LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKN 322

Query: 319 PDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSMV 378
           PDK  LV+ LLEEL +RE LKL+QQD T+I+K+C +L +FE+ E L+ W+  S  EPS+V
Sbjct: 323 PDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVV 382

Query: 379 MYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAKL 438
           MYT ++HSRYS++KYREA+S+VWEME +NC  DLPAY VVIKLFVAL DL RA+RY++KL
Sbjct: 383 MYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKL 442

Query: 439 KEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQITSMLLQAKR 490
           KEAGFSPTYD+YR+MI++Y  SGRL K KEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 KEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of MELO3C004826.2 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 5.6e-12
Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 357 AEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIK 416
           A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E +    D   +N VI 
Sbjct: 64  AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123

Query: 417 LFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEI 466
            F   G++  AV+   K+KE G +PT   Y  +I  Y ++G+  +S E+
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172

[Close]

BLAST of MELO3C004826.2 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 1.9e-04
Identity = 32/129 (24.81%), Postives = 61/129 (47.29%), Query Frame = 0


Query: 344 IIKVCTRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESAN 403
           +I +  ++R+F++A  L         E S+  +T L+          EA+     ME   
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216

Query: 404 CPFDLPAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSK 463
           C  D  A+++VI         S A  +F  LK+  F P   VY N++  +  +G +++++
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAE 276

Query: 464 EIYKEAENA 473
           +++KE + A
Sbjct: 277 KVFKEMKLA 284

[Close]

BLAST of MELO3C004826.2 vs. TAIR10
Match: AT5G57250.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 43.5 bits (101), Expect = 4.3e-04
Identity = 24/104 (23.08%), Postives = 45/104 (43.27%), Query Frame = 0


Query: 365 VESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDL 424
           V  G    ++ Y+ L+ S    +     L +      A  P DL   N+++K F+ +G  
Sbjct: 404 VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAY 463

Query: 425 SRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKE 469
             A   +  + E   +P    Y  MI  Y  +G++ ++ E++ E
Sbjct: 464 GEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507

[Close]

BLAST of MELO3C004826.2 vs. Swiss-Prot
Match: sp|Q5XET4|PP142_ARATH (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX=3702 GN=EMB975 PE=2 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 3.4e-123
Identity = 248/475 (52.21%), Postives = 322/475 (67.79%), Query Frame = 0


Query: 19  GGIGCQITMVH-FKANSRRRPPKNLLCPRRAKLPPDPAVNQFLNNKTSAPSPSFTDLISS 78
           G IG  +T V+  + N  ++  KNL  PRR KLPPD  VN FL      P          
Sbjct: 23  GNIG--VTRVNASQRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP---------- 82

Query: 79  KIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKL 138
            +                    W+ +EIEAISSLFQ RIPQKP K +R RPLPL      
Sbjct: 83  LVIXXXXXXXXXXXXXXXXXXXWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPL---XXX 142

Query: 139 RPPRLPNPKIRPTTTVSSRAL--LSKKVYKRPDFLIGLARAIRDL-SPEENVSKVLNRWG 198
                          + S AL  +SK+VYK P FLIGLAR I+ L S + +VS VLN+W 
Sbjct: 143 XXXXXXXXXXXXXNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWV 202

Query: 199 PFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKVP 258
            FL+KGSLS TI+ELGHMGLP+RAL+T+ W ++   L PD+R+LAST++VL+++HELK+ 
Sbjct: 203 SFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL- 262

Query: 259 VNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKN 318
             L+    LAS+ V+EAM++G I+GG LNLA KL++ +K   R+LD SVYVK+ILE+ KN
Sbjct: 263 --LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKN 322

Query: 319 PDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSMV 378
           PDK  LV+ LLEEL +RE LKL+QQD T+I+K+C +L +FE+ E L+ W+  S  EPS+V
Sbjct: 323 PDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVV 382

Query: 379 MYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAKL 438
           MYT ++HSRYS++KYREA+S+VWEME +NC  DLPAY VVIKLFVAL DL RA+RY++KL
Sbjct: 383 MYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKL 442

Query: 439 KEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQITSMLLQAKR 490
           KEAGFSPTYD+YR+MI++Y  SGRL K KEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 KEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of MELO3C004826.2 vs. Swiss-Prot
Match: sp|Q8GZ63|PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-10
Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 357 AEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIK 416
           A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E +    D   +N VI 
Sbjct: 64  AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123

Query: 417 LFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEI 466
            F   G++  AV+   K+KE G +PT   Y  +I  Y ++G+  +S E+
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172

[Close]

BLAST of MELO3C004826.2 vs. TrEMBL
Match: tr|A0A1S3CGD0|A0A1S3CGD0_CUCME (pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN=LOC103500594 PE=4 SV=1)

HSP 1 Score: 966.8 bits (2498), Expect = 1.8e-278
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826.2 vs. TrEMBL
Match: tr|A0A0A0LVM0|A0A0A0LVM0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 7.3e-264
Identity = 464/489 (94.89%), Postives = 474/489 (96.93%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826.2 vs. TrEMBL
Match: tr|A0A2N9HFH8|A0A2N9HFH8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38191 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 3.3e-168
Identity = 306/471 (64.97%), Postives = 380/471 (80.68%), Query Frame = 0


Query: 24  QITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFLNNKTSAPSPSFTDLISSKIFQDE 83
           ++ ++   ++++RR PKNL  PR  KLPPD  VN FL  KT+   PS TDLI+S + ++ 
Sbjct: 25  RVALMAANSSTKRRLPKNLRYPRSTKLPPDFGVNLFLKKKTT--DPSLTDLINSHLAEEG 84

Query: 84  HEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLP 143
            E+       +DT +VWDSDEIEAISSLF+GRIPQKPGKLNR+RPL     +KLRP  LP
Sbjct: 85  EEDTQ----EEDTGIVWDSDEIEAISSLFRGRIPQKPGKLNRQRPLXXXXXYKLRPAGLP 144

Query: 144 NPK-----IRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDLSPEENVSKVLNRWGPFLQ 203
            PK     + P + +SSRA LSK++YK P  LIG+AR I+ LS EE+VS +LN+W  FL+
Sbjct: 145 APKKHVKSVSP-SALSSRASLSKQLYKNPGVLIGIAREIKSLSSEEDVSVILNKWASFLR 204

Query: 204 KGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKVPVNLE 263
           KGSLSLTI+ELGHMGLP+RALKTFCW Q+Q +LFPDDR+LASTVEVL+RNHELKVP NLE
Sbjct: 205 KGSLSLTIRELGHMGLPERALKTFCWAQKQPQLFPDDRILASTVEVLARNHELKVPFNLE 264

Query: 264 EFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKN 323
           +FT LASRGV+EAM+RGFI+GGSL+LA K+L+ AK GKRMLD SVY KLILELGKNPDK 
Sbjct: 265 KFTALASRGVIEAMVRGFIRGGSLHLARKVLLIAKHGKRMLDSSVYAKLILELGKNPDKQ 324

Query: 324 VLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSMVMYTA 383
           +LV+ LL+ELG+R+   L+QQD T I+KVC RLRKF+I E L+ W+ +SGH+PS+VMYT 
Sbjct: 325 LLVVALLDELGERDDFNLSQQDCTAIMKVCIRLRKFDIVESLFNWFKQSGHDPSVVMYTT 384

Query: 384 LVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAKLKEAG 443
           L+HSRYS++KYREAL++VWEME++NC FDLPAY VVI+LFVAL DLSRAVRYF+KLKEAG
Sbjct: 385 LIHSRYSEKKYREALAVVWEMEASNCLFDLPAYRVVIRLFVALSDLSRAVRYFSKLKEAG 444

Query: 444 FSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQITSMLLQAKR 490
           F PTYD+YR++I IY++SGRLAK KE+ KEA  AGF +DK+ TS LLQ +R
Sbjct: 445 FCPTYDLYRDLIKIYMISGRLAKCKEVCKEAGQAGFKLDKETTSWLLQFER 488

[Close]

BLAST of MELO3C004826.2 vs. TrEMBL
Match: tr|A0A2I4GWH4|A0A2I4GWH4_9ROSI (pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Juglans regia OX=51240 GN=LOC109011476 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 3.5e-157
Identity = 293/465 (63.01%), Postives = 355/465 (76.34%), Query Frame = 0


Query: 31  KANSRRRPPKNLLCPRRAKLPPDPAVNQFL-NNKTSAPSPSFTDLISSK----------- 90
           ++ +RRRPPKNL  PR  K PP+  VN FL    T++   S   LI  K           
Sbjct: 30  RSKTRRRPPKNLRYPRHPKSPPNFGVNLFLKKTSTNSTDISLAYLIDGKKPRLAGKKGXX 89

Query: 91  -IFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKL 150
                           ++T + WDSDEIEAISSLFQGR+PQKPGKLNRERPL     +KL
Sbjct: 90  XXXXXXXXXXXXXXXRQETGICWDSDEIEAISSLFQGRVPQKPGKLNRERPLXXXXXYKL 149

Query: 151 RPPRLPNPKIRPTT----TVSSRALLSKKVYKRPDFLIGLARAIRDLSPEENVSKVLNRW 210
            P  LP PK    +     VSSRA LSK+VYK P  LIG+AR I+ +S EE+VS VLN+W
Sbjct: 150 XPLGLPTPKKHVKSASPLVVSSRASLSKQVYKNPGVLIGIAREIKMISSEEDVSVVLNKW 209

Query: 211 GPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKV 270
             FL+KGSLSLTI+ELGHMGLP+RAL+TFCW Q+Q +LFPDDR+LASTVEVL+RNHELKV
Sbjct: 210 ARFLRKGSLSLTIRELGHMGLPERALQTFCWAQKQTQLFPDDRILASTVEVLARNHELKV 269

Query: 271 PVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGK 330
           P  L +FT LASRGV+EAM+RGFI+GGSL+LAWKLL  A+ GKRMLDPS+Y KLILELGK
Sbjct: 270 PFKLGKFTSLASRGVMEAMVRGFIRGGSLHLAWKLLSVARDGKRMLDPSIYAKLILELGK 329

Query: 331 NPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSM 390
           NPDK++LV++LL+ELG+RE L L+QQD T I+K+C RL KF++ + L+ W+ +SG+EPS+
Sbjct: 330 NPDKHMLVVSLLDELGEREDLNLSQQDCTAIMKICIRLGKFDVVDGLFNWFKQSGYEPSV 389

Query: 391 VMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAK 450
           VMYT L+HS YS+RKYREAL+LVWEME++NC  DLPAY VVIKLFVAL D+SRAVRYF+K
Sbjct: 390 VMYTTLIHSHYSERKYREALALVWEMEASNCLLDLPAYRVVIKLFVALNDISRAVRYFSK 449

Query: 451 LKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDK 479
           LKEAGFSPTYD+YR +I IY+VSGRLAK KE+ KEAE AGF +DK
Sbjct: 450 LKEAGFSPTYDMYRELIKIYMVSGRLAKCKEVCKEAEIAGFKLDK 494

[Close]

BLAST of MELO3C004826.2 vs. TrEMBL
Match: tr|A0A2I4GWH7|A0A2I4GWH7_9ROSI (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Juglans regia OX=51240 GN=LOC109011476 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 3.5e-157
Identity = 293/465 (63.01%), Postives = 355/465 (76.34%), Query Frame = 0


Query: 31  KANSRRRPPKNLLCPRRAKLPPDPAVNQFL-NNKTSAPSPSFTDLISSK----------- 90
           ++ +RRRPPKNL  PR  K PP+  VN FL    T++   S   LI  K           
Sbjct: 84  RSKTRRRPPKNLRYPRHPKSPPNFGVNLFLKKTSTNSTDISLAYLIDGKKPRLAGKKGXX 143

Query: 91  -IFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKL 150
                           ++T + WDSDEIEAISSLFQGR+PQKPGKLNRERPL     +KL
Sbjct: 144 XXXXXXXXXXXXXXXRQETGICWDSDEIEAISSLFQGRVPQKPGKLNRERPLXXXXXYKL 203

Query: 151 RPPRLPNPKIRPTT----TVSSRALLSKKVYKRPDFLIGLARAIRDLSPEENVSKVLNRW 210
            P  LP PK    +     VSSRA LSK+VYK P  LIG+AR I+ +S EE+VS VLN+W
Sbjct: 204 XPLGLPTPKKHVKSASPLVVSSRASLSKQVYKNPGVLIGIAREIKMISSEEDVSVVLNKW 263

Query: 211 GPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKV 270
             FL+KGSLSLTI+ELGHMGLP+RAL+TFCW Q+Q +LFPDDR+LASTVEVL+RNHELKV
Sbjct: 264 ARFLRKGSLSLTIRELGHMGLPERALQTFCWAQKQTQLFPDDRILASTVEVLARNHELKV 323

Query: 271 PVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGK 330
           P  L +FT LASRGV+EAM+RGFI+GGSL+LAWKLL  A+ GKRMLDPS+Y KLILELGK
Sbjct: 324 PFKLGKFTSLASRGVMEAMVRGFIRGGSLHLAWKLLSVARDGKRMLDPSIYAKLILELGK 383

Query: 331 NPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSM 390
           NPDK++LV++LL+ELG+RE L L+QQD T I+K+C RL KF++ + L+ W+ +SG+EPS+
Sbjct: 384 NPDKHMLVVSLLDELGEREDLNLSQQDCTAIMKICIRLGKFDVVDGLFNWFKQSGYEPSV 443

Query: 391 VMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAK 450
           VMYT L+HS YS+RKYREAL+LVWEME++NC  DLPAY VVIKLFVAL D+SRAVRYF+K
Sbjct: 444 VMYTTLIHSHYSERKYREALALVWEMEASNCLLDLPAYRVVIKLFVALNDISRAVRYFSK 503

Query: 451 LKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDK 479
           LKEAGFSPTYD+YR +I IY+VSGRLAK KE+ KEAE AGF +DK
Sbjct: 504 LKEAGFSPTYDMYRELIKIYMVSGRLAKCKEVCKEAEIAGFKLDK 548

The following BLAST results are available for this feature:

BLAST of MELO3C004826.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462173.1	2.7e-278	100.00	PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] ...	[more]
XP_004139567.1	1.1e-263	94.89	PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativu...	[more]
XP_022951807.1	4.1e-226	81.04	pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita mosc...	[more]
XP_023537574.1	9.1e-226	80.64	pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pep...	[more]
XP_022153119.1	7.7e-225	81.41	pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Momordica char...	[more]

BLAST of MELO3C004826.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01860.1	1.9e-124	52.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	5.6e-12	31.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G20300.1	1.9e-04	24.81	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G57250.1	4.3e-04	23.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of MELO3C004826.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5XET4\|PP142_ARATH	3.4e-123	52.21	Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX...	[more]
sp\|Q8GZ63\|PP397_ARATH	1.0e-10	31.19	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX...	[more]

BLAST of MELO3C004826.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CGD0\|A0A1S3CGD0_CUCME	1.8e-278	100.00	pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0LVM0\|A0A0A0LVM0_CUCSA	7.3e-264	94.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1	[more]
tr\|A0A2N9HFH8\|A0A2N9HFH8_FAGSY	3.3e-168	64.97	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38191 PE=4 SV=1	[more]
tr\|A0A2I4GWH4\|A0A2I4GWH4_9ROSI	3.5e-157	63.01	pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Juglans regi...	[more]
tr\|A0A2I4GWH7\|A0A2I4GWH7_9ROSI	3.5e-157	63.01	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Juglans regi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
biological_process	GO:0008150	biological_process
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004826.2.1	MELO3C004826.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 395..453 e-value: 2.2E-5 score: 24.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 410..442 e-value: 1.6E-4 score: 19.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 265..299 score: 5.36
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 10.446
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 442..476 score: 7.267
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 7.64
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 372..406 score: 7.563
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 319..489 e-value: 2.9E-25 score: 91.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 173..318 e-value: 7.0E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..149
None	No IPR available	PANTHER	PTHR24015:SF642	SUBFAMILY NOT NAMED	coord: 23..488
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 23..488

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004826.2	Csa1G144300	Cucumber (Chinese Long) v2	cumedB010
MELO3C004826.2	CSPI01G14160	Wild cucumber (PI 183967)	cpimedB011
MELO3C004826.2	Cucsa.200220	Cucumber (Gy14) v1	cgymedB361
MELO3C004826.2	Lsi03G000760	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C004826.2	CsGy1G014140	Cucumber (Gy14) v2	cgybmedB009
MELO3C004826.2	ClCG01G012950	Watermelon (Charleston Gray)	medwcgB133
MELO3C004826.2	Cla97C01G013200	Watermelon (97103) v2	medwmbB127
MELO3C004826.2	Bhi08G000095	Wax gourd	medwgoB176
MELO3C004826.2	CsaV3_1G014370	Cucumber (Chinese Long) v3	cucmedB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004826.2	Cucurbita maxima (Rimu)	cmamedB161
MELO3C004826.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C004826.2	Cucurbita moschata (Rifu)	cmomedB151
MELO3C004826.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C004826.2	Cucurbita pepo (Zucchini)	cpemedB563
MELO3C004826.2	Cucurbita pepo (Zucchini)	cpemedB881
MELO3C004826.2	Watermelon (97103) v1	medwmB165
MELO3C004826.2	Silver-seed gourd	carmedB0174