CSPI01G14160 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G14160
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Chr1 : 9765977 .. 9774257 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTTTGAGAAAAAGAAAAGTGATCTTCATATGCTTTGCTGCAGTCCAATCATCGATCCTAGTAATGTATTCCAAAGTGGGTCGTCGCCCCCTCCATTTACTGTCTTCGTCTTAGAGGGATTGAACGCTATGGATCACTTGTTTCTACCTGAGAGTTTGCTTCTAAAGAGTGTGTTTTCTTTTTAGTACTTTTCTGAACGTTCTTAGCGAACTAAATTCAATTTGAAAATCACAAAACTAATAGAAAACAAAAATTAAGAATCAACACACTGTACCCAACCGAACTGATTTTTATTTTAAAAGATAGGATTTTTCTCTTTCTTCTTCAAACTAACGGCCTCTCAATCTCTATTCTCAAATTGCATCTCTCTCACCCAGCTCAGTAACTCACGTTCACGTCTTCAACTTCACGCCGCCCATCGCTCCACTTCTCCATAGCTCATTATCTTACTCTCACATTTCATCTCTCTTGACTCAGACTCAGACTCACCTTCACGTCCTCCACCGGTGACCGACCACCGCTCCTCCTCTGTCTCATGCTCACCCCTCTGACTCTCATCTCACGCTCCGAAATCGCGGAGATTCATTCAGTAAAACGGTTTTTGCAACTTTTTTCTCCCTTCGGTTCCCCCCTTGAATGGAAGATTCTCGTGGGCATTTCTTGCTTTGAAGAATATCTTCAAATTTTGAATCTTATAATCAATTTTATTTATGGTATGGCTTCTTCTATATTGTCTTTCATAATCTTATTGAATATTGTTATTGATTTGCAACTTTTTTCATCATTGTGTTGCTTTGTAGTATATTCCTCAAAATGCAAGTTGAAAATGTCCATTGGATTTTGTTCGCATTTCGTACTTCACATGTGTTTTCAATATTGTTTACAGTCTGTTGCACTGCATTCTTGTTATTTCTGGGGTAGTTGAACAAATCCAAACCATGGTGAATTTGTGTATCTTTTATTAAATTAGAGTTGAAGTGTTTGGTGTTTGGTGGAGATGGTTATTTTATGTCATTTTCCTGTGAAATTCATGGTTTTTCCTTTCCTTTTTCTTTATTATTCCTTCCGTAGGACAAATTCGAAGCAAGACCAAGGAGCCAGAGGAAGAAGTTAGAACGAGACCAATGGGCTACAATGTATAAAAGAGACGAGAGAGAGATAAGATTGAAGGGAAACAGAGTGTATCACTGATACTACTAATTGGATAGGTTCTTGTAATTTTATTTTCACTTGTAAGGTCAACTTTTGGTAGAAAACTATTTTTATAACCCCGTGGAGTCTGTAATTTGCACCTTCAAAGCTTCTCACTCGGAATTATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATAGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCGAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGCGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGAATCACCTGTGGCAAGAGATATTTTCTATTATCTATCACTGAGTTGCACTATCGGTTTACCTATCATCTAGTAGGTGAGTTGTTCTCAATGTATTTGAATTGCATTTTCATCTGCACTAAATAAATTGTTAATGAATAATCTTTGTTTCCCTTCATCTACCACGTTCATATTGCATCTAATCTATGGATTTCAGTAGTACATCTTAAAACGTACTTGGATTTTTGCTTTAGGATATATACATGACTCACATAATGACTTATGCACTTTTTTTTTTTTTTTTTTTTTTCCTTTTGAAAACAAAGCATGAAGCTCAAATGCATTACGCCAGAAATCTCTGATTTGCCCCAATACATTGTGATATCCAATCTGGCACATCAGTAACCCAACAAGAGAAAACCTGACAAGAAAGAGAAAATTTGGCCGATAAATGGGCCACACTATTACTCGTTCTGGGCAATTAAGTAAAGTGAAAACATCCTTATAAATAACTCCGTATACAGATAGATAACTCCTTATGCAGATAAGGAAAAGTTGAAAGAATGTCTCCTGGACTAATAATATACATTGTACAAATTCAACGAAGATTTTGACATATACTGACCAACAATTCTTATTCTCATCTAGCTTCTATATATTGTTAGTTCTATTATTCTATGAAGTAACTCAATGCTTTGTCCTTCCAAGTACCTGTTTCTAGATAAGTTTCATAAAAGTGTACCATTCCTGTTGTAGTTATAGTCAATACAGATGTGCTTCTGGTACCAAAACATCCCTGTGTTGAAATTTTTAAAAAAACTAAGTCAAAATTTCTGCTATGAATGAAATCAAATTGTATGCTTATCAGAGGGGTCTGAAATTGGACAAAGACAGAGCTTGTATTGTACTCCCAGTCAGGGGAGGATATATGAGGAAGTTTGCTTTCATCAGTTTTTACATGGCCCCTCATTAATCTCTCATGGTATTTCACCTTCAGCATGTATACGAAGCTGTTCATTAAATTTTAGCCTCAAGCTGCATCTGCATGTAAGTCAAAGCCTTCAGTCACTCTATTTTACTTTTCTTCACTTTTTCTTTCTTGCGGGTTCATTTGCCTTTTCACATGTGCCCATGTGTGTGTATTTGTAACCAATCTCCCCTTGTTGATGAATATAGATTTGAACATTTTGGGACCAACGAAGAAAGTTATCCCATTAAGTTGAATGGTAGTTATTTGGACAGTGGGACTGTTGTTTAGGGTGCGGTTGTCTAAGACTTTAGTGGCAATGGGCTTGGTGTCTGACATATTGCTGAAAAAACACCAACCCAAAGAGAAAAACCAAAGATCTGGAAAGAAAACACCAGATTAAAGAAGAAAAAACAGGGGTGGCGGTGTTTGGAGGTGTAACATGGCAGAAGGCGACGGAACACGACATTGGTGTGATAGAACACCAACTAGGAGTGATCTTATTCAATCGGTAAAAACGAAAGAAATTACAAGGATGAATCGATGGATTGTCAATTCGGTGAAATAAATGCAAGAATACAAGAAAATAGTTGATCGCTCTCCTTCTATCTCTCCTCTCTCTCAAGGATGAAGATAAAGGTCCTTCGAAAATATTTCCTCCCCTCTCACAGTGACTCTCCCCGCTATTTAAACCTCCCATTCTCTCCTAACTAACTGTGGGCCCAGTATTAGCACTCACACTCACTCCCCATTACACATGCTTTCTCTTTCTTTCCTCTCCTGCTATATTGCAATATTATTGGAGGTCTAACATTGTTGCAGACTTGACTGACCTATGGTAGGAGCTATCCTAAGCAAAAAGCGGCTCCTTCGGACAAGTTTCACTCGAGCGAAAGAAAAAAAAAGCTTTGACGGCTCTGGCTCCGGGTTCAGCTTGGATTTGAAGGATTGACCACGATGGTAAACAAGGAAAAGTTGACGACCCTGGCAGCGGGGGGCAAATAGGGTGTTTTTAGTGTTTGAGAAATAGGGTGTTTTTAGAGCTTTAGGACAATTTAATCTCTGATACCATGTGTAAAAATGTGTTTTCTCTTATTTCCCTCGGAAAGAAAGGGGTTTTCTTAAATAGAAATACCCAATACAAAAAATGAAAAATACAAATAAGGAAAAAATAAATACAGAAATATATCTTAAATACAATGAAAATATTAACAATGAAGGAAATAATCAACAATAAACAAACTTCTTAACTAAGATTAGTTGATTTTAACATGATGGAAGTTTTCTTTCACGAAGAATTTGGCTGAAATCTTGCCTGAAGAATTCAGTTAAATTCTTCTATCATTATGAGATCCAATATAAAATGTAAATTTAAAAATAATAAATAAGTGAAACTTTTGGCATCTCTTTCTTGGAGGGAATATCGATATTACAAAAAGGGAGGGTGGGGGGATGAAAAGAAAATAAATAGTGATGTATATCAGTGGATTGAATTTCCTCTAATTGAAGGGGATATAGATAAGAAATAGAAATTGGGAAAAGAATTGGAGAAACGAGAGAGATTGATTTGAGAGAAGCCGAGGAAAAAACTGAATGACATTTTGTGTATGGAGTACTTGACCAGTTCCAGCTTTCTGAGTGGGATGGTATAATGTACTGTTGGCTCTGGCTTTATGTGGTGTCTTTGCAATGGCACTCTCCACTACATGTTCACAATGTTGAAAGCTAAAGAAAATGTGCAATGGGAGTCGACTATTGAAGGTACACCACATGACACCCTTGCACAAGGCAAGAAGATGGTTACGTGCCTCACCTTGCCTAGGACCATAAGCTTGCCTCAAAATGCACCTCAATAACACTGCTGAGTACCTTTTCAATTTATACTTTTCTGCCTGAAAGCTGGTTTGCTAATTGAAAGTGACCGGTGGTTTTAGCAAGAATGTGTTAGGTACTTAAGCACCTTGGAGAGCCATGGGGTTTCTGTTGGGGTAGGAGAGCCAAGCTACTTATGGCCCGTTTGGTAACGTTCCCGTTTTCCGTTTCCCATTTCTTGTTTCTGGTTCTAATTTTTTAAGAAACGGATGTGTTTGGTAACGTTCCTGTTTCTTGTTCCCAAAATAATTAGAAATGTTTCTAATTTAATAAGAAATTTGTGGGAACAACAAAAAAGAGTTTCTCCTCGTTCCATTCTTGTTCTCTTCCCTTTGTTTCTCCTCTTTGTTCTTGGGCTTTCTTCTCCGGCTCTCTTTTTCTCTTCGTTCGTTCCTCTTCCGTTTCTCTTTGTTTAGTTCCTCTCCAATTACCTTTTCTCTCTTTGTTCTTCGTTTCTTCTCCGGCTTTCTTCTTTGCCTCTCTTCTAAAGTTATGGCTATAGTTTTCTCAAGCTTCCTCTTCATCAAACGTACAGCTACCCTTTCCTCTTCATCAATTTCCAAATTCATGATTTTCTTTGCTCCATCAACAGGAAGCTCTTCTCTTTCTCCTCACTCCCAAAGCGGAACTTGGGAACAGAATTCTAGGTATTCCCTTAATTTTCTCCCATTTTCCTATCATTTCTGTTATGGGTTTCTCAAATTTTCAATCCTAAGATGAATTTTGTTAAGATTTAAACCTTTTTGTTATCTTTGTTTGGCAGGATTTTTGTTTTCTATAGTAAATTTCAGCTGTAGTTTAGTGGAAAGGTGGATATTGTTTTTGGAAATTGAATCTATGTATTTGCTGCTTATTGTTATCATTGTTCATTATCAAATTAGAACTCCAATCCTCTGTTTTTGCCTTCAAAACCCCTTTCAGATTCCAGGCATTCCTCGATTTATACTGATTTTATGCCTCATTTAATGATAATTAGCCTTATGGGTACTCTTGGGTCATTTTAACAACATTGCCAAATTTTAGCCTTTGTGTTCTATGTATTAGTGACTCATCAGTTTAAGCAAAATACTCTTTAATGATCTCAGGTTCTCAACATTTTTTTATACAGCCGTCTAGGAAGTGAAACCTTCAATGGCACAATATGCTAGTTTAGTCCATACTAGCCTCTTAAATTATGGCTTTACTCACAAAATGAATCCTTCATATTGGAGATATGATATGGTTAAATCACGACCTTCCCCTCAACGTAGCTTTCGTGTCAAAGTTGTGCAAGATACCGAAGGTCCTAGTAGGATAGTTGATATCATTAGACTCGTGCCTGAGCTCTCAAGAAATTACTTTAGAAGTCCTTCGAGGAGGGCCCTTTTTGGATGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAAAATATCTCATTGTCATTTGGAGCTTTTGGAGTAAATGATGTTTTTGCTACTGTGGTATGCATTCTCCTCACCGATGTTACTCGATTTTATTACAATCGACCAAAGGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGTTTCACTTGTGGTCTTTTCATTGATGCTTTCAAACTTGCTAGTTAACAGCACTTGAAAAAACCATTCTGGTGGTAGCTATAGCATTTACATTTGTAAAGTTCTTTGAGCGATAATTTTGGTTTTACTCTCTATCTCTACAGCTTGTTCTAATTCTTTTTGTTGAATTTTTTTCCATTTTCTCCTTTGTTTCTTCTGTATATTTTCAACATACGGTTTTCATTGGAGAGTTAAATGTTCTATACACCCTCAAATCAAATATAGTAACAAATTTGAATGTAATTGATGACTTTTAAGAGTTTAATTTTTGTTTGTGTATTGAAATGCATCCCTTGCAATGGAGAATTGTTTGGAAACCATGAATCCAGTGTTGACTATCAGCGACAAATTTAAGATGGTAAGTTGTTAATAAGATACAAGCTTTCACCCAGTGTACTTCAACAGAACCATAATGTGTAGTCACTTGGCATTATTGTGTTTACTATTGTTGTTAAGAATATCTCTTATCTTTTGGTTTGATTCATAGATAAGCTTCAGATGTATTGAAATTTATGCTGATACATAATTTAAATGATATTGATCTTACCTTCTTATCTTTTGGTTTGATTCAAGGCTGTTGTAGTCTATATTTTGTGAATAACTGGCATTTCTTTCAAACTTTCATATAAATATTTGTTTTAAATCTCTTTTGTAGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACACTGAAGTCATGTTCTCTAATGTAGAGGAAGTCCTTGTGGTTGAAGAAGCTCAGCCAACTGAAACAAATCATTGCACAAGAGAAGAAGTTGAACCAAAACAAGCTACCAAAAAGGAGTTGAAGCCCATTGCCTGTGTACATAAGATCCTTAAATTTAACTTACCTGATTCTGTTGTCCCAAAGCTCAATATCTTAGTGCATTAAAGGGACTAGTGTTTTCATATTTGTATATATTGAGCTGTAAGTTTATGTATATGTAGATGCAATGGGACAGATAAGCTAAGAATTTAGATGAGTTGTCGGTAGTCATCCAAGAAGAACAAATATAGAGAATCATGAAGTTTGTAAAACAAAACAACCTTGAATGTTTGGTTTGTATGGTGAATTATCTATGCC

mRNA sequence

ATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATAGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCGAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGCGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGA

Coding sequence (CDS)

ATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATAGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCGAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGCGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGA

Homology

[Close]

BLAST of CSPI01G14160 vs. Swiss-Prot
Match: PP142_ARATH (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN=EMB975 PE=2 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 5.1e-140
Identity = 261/460 (56.74%), Postives = 335/460 (72.83%), Query Frame = 1


Query: 33  NSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHDY 92
           N  ++  KNL  PRR KLPP+  VN F       P           +  D+ E++     
Sbjct: 36  NHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL----------VIDDDDEQVQESVN 95

Query: 93  TKDTDVVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTV 152
             D  VVW+ +EIEAISSLF+ RIPQKP K +R RPLPLP PHKLRP  LP PK     +
Sbjct: 96  DDDDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLRPLGLPTPK---KNI 155

Query: 153 VSSRAL--LSKQVYKRPDFLIGLAREIRDL-SPEENVSKVLNRWGPFLQKGSLSLTIKEL 212
           + S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN+W  FL+KGSLS TI+EL
Sbjct: 156 IRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVSFLRKGSLSTTIREL 215

Query: 213 GHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVL 272
           GHMGLP+RAL T+ WA++   L PD+R+LAST++VL+++HELK+   L+    LAS+ V+
Sbjct: 216 GHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL---LKFDNSLASKNVI 275

Query: 273 EAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELG 332
           EAM++G I GG LNLA KL++ +K   R+LD SVYVK+ILE+ KNPDK  LV+ LLEEL 
Sbjct: 276 EAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNPDKYHLVVALLEELK 335

Query: 333 QREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKY 392
           +RE LKL+QQDCT+I+K+C +LG+FE+ E L+ W+  S  EPS+VMYT ++HSRYS++KY
Sbjct: 336 KREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVMYTTMIHSRYSEQKY 395

Query: 393 REALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNM 452
           REA+S+VWEME  NC  DLPAY VVIKLFVAL DL RA+RY++KLKEAGFSPTY++YR+M
Sbjct: 396 REAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLKEAGFSPTYDIYRDM 455

Query: 453 ITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           I++Y  SGRL KCKEI KE E+AG  +DK  +  LLQ ++
Sbjct: 456 ISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of CSPI01G14160 vs. Swiss-Prot
Match: PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 5.9e-11
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 1


Query: 342 TTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMES 401
           T ++ V    G+   A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 402 GNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAK 461
                D   ++ VI  F   G++  AV+   K+KE G +PT + Y  +I  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 462 CKEI 466
             E+
Sbjct: 169 SSEL 172

[Close]

BLAST of CSPI01G14160 vs. Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-09
Identity = 32/113 (28.32%), Postives = 62/113 (54.87%), Query Frame = 1


Query: 352 GKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAY 411
           G+ + A  +++  +E GH+PS++ YT LV +    + +   LSL+ ++E      D   +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392

Query: 412 SVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKE 465
           + +I      G+L +A++ F K+KE+G  PT + +  +I  Y   G++ K +E
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY---GKIGKLEE 442

[Close]

BLAST of CSPI01G14160 vs. Swiss-Prot
Match: PP408_ARATH (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.5e-09
Identity = 40/142 (28.17%), Postives = 69/142 (48.59%), Query Frame = 1


Query: 344 IVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGN 403
           +++   R  +F+IA  L+    +    P    Y+ L+ S   +  +  ALS + +ME   
Sbjct: 161 VLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDR 220

Query: 404 CPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCK 463
              DL  YS +I+L   L D S+A+  F++LK +G +P    Y +MI +Y  +    + +
Sbjct: 221 VSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREAR 280

Query: 464 EIYKEAENAGFMMDKQITSMLL 486
            + KE   AG + +    S LL
Sbjct: 281 LLIKEMNEAGVLPNTVSYSTLL 302

[Close]

BLAST of CSPI01G14160 vs. Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 7.2e-09
Identity = 66/250 (26.40%), Postives = 108/250 (43.20%), Query Frame = 1


Query: 238 LASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKR 297
           L    EVL +  E  +  ++  FT L S         G+   G +  A+ L+   +K  R
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLS---------GYAHAGKMADAYDLMNDMRK--R 311

Query: 298 MLDPSV--YVKLILEL---GKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLG 357
             +P+V  Y  LI  L    K  D+ M V   +E  G        + D  T   + +   
Sbjct: 312 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC-------EADIVTYTALISGFC 371

Query: 358 KFEIAEKLYSWYVE---SGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLP 417
           K+ + +K YS   +    G  PS V Y  ++ +     ++ E L L+ +M+   C  DL 
Sbjct: 372 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 431

Query: 418 AYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEA 477
            Y+VVI+L   LG++  AVR + +++  G SP  + +  MI  +   G L +    +KE 
Sbjct: 432 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 483

Query: 478 ENAGFMMDKQ 480
            + G     Q
Sbjct: 492 VSRGIFSAPQ 483

[Close]

BLAST of CSPI01G14160 vs. TrEMBL
Match: A0A0A0LVM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 2.5e-279
Identity = 486/489 (99.39%), Postives = 488/489 (99.80%), Query Frame = 1


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTIVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDSIVSATSVSSILVKGNGGIGCQNT+VHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFRGRIPQKP 120
           NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLF+GRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of CSPI01G14160 vs. TrEMBL
Match: B9H5I8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2)

HSP 1 Score: 583.9 bits (1504), Expect = 1.8e-163
Identity = 294/455 (64.62%), Postives = 362/455 (79.56%), Query Frame = 1


Query: 36  RRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKD 95
           R+ PKN+  PRR+KLPP+  VN F     +      +D ++    ++E EEI  ++    
Sbjct: 11  RKIPKNIRYPRRSKLPPDFGVNLFLKKPQTDSVQDHSDDLTE---EEEEEEIEVNN---- 70

Query: 96  TDVVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVS- 155
            ++VW+S+EIEAISSLFRGRIPQKPGKL RERPLPLP+P+KLRP  LP PK      VS 
Sbjct: 71  GEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPVPYKLRPLGLPAPKKHVNKQVSL 130

Query: 156 SRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGL 215
           SRA +S Q+YK P FLIGLA+EI+ LSP+++VS VL+    +L KGSLSLTI+ELGH+GL
Sbjct: 131 SRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDNCSRYLHKGSLSLTIRELGHLGL 190

Query: 216 PDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMR 275
           P+RAL TFCW Q+Q RLFPDDRVLASTVEVL+RNH+LKVP NLE+FT LASR V+EAM++
Sbjct: 191 PERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLKVPFNLEKFTNLASRRVIEAMVK 250

Query: 276 GFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREAL 335
           G IRGGSL LAWKL+  AK GKRMLDPSVY K+ILELGKNPDK++L   LL+EL +RE L
Sbjct: 251 GLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELGKNPDKHVLAEALLDELAEREDL 310

Query: 336 KLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALS 395
            L+QQDCT ++KVC +LGKFE  E L++W+ +SGHEPS+VMYT L+HSRYS+ KYREAL+
Sbjct: 311 NLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPSVVMYTTLIHSRYSESKYREALA 370

Query: 396 LVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYL 455
           +VWEME  +C FDL AY VVIKLFVAL DL RAVRYF+KLKEAG SPTY++YRN+IT+Y+
Sbjct: 371 VVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLITLYM 430

Query: 456 VSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           VSGRLAKCKE++KEAE AGF   K++ + LLQ KR
Sbjct: 431 VSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458

[Close]

BLAST of CSPI01G14160 vs. TrEMBL
Match: W9QJX3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003157 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 3.3e-162
Identity = 290/459 (63.18%), Postives = 357/459 (77.78%), Query Frame = 1


Query: 32  ANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHD 91
           + +RR+ P NL  PRR KLPP+   N F  N T+     +   I   +  DE E+    +
Sbjct: 33  SRTRRKIPNNLRYPRRGKLPPDLGANLFLKNTTNTTKESYQPGI---MINDEEEDQEQDE 92

Query: 92  YTKDTDVVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPT- 151
              D D+VW+SDEIEAI+SLFRGRIPQKPGKLNRERPLPLPLP+K+RP RLP PK R   
Sbjct: 93  NDDDDDIVWESDEIEAIASLFRGRIPQKPGKLNRERPLPLPLPYKIRPLRLPMPKKRTKM 152

Query: 152 ---TVVSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIK 211
               + SSR  LSK+VYK P  L GLAREI+ L  EE+VS VL++WG FL+KGSLS+TI+
Sbjct: 153 ASPVLFSSREPLSKKVYKSPGVLTGLAREIKSLPEEEDVSSVLDKWGQFLRKGSLSMTIR 212

Query: 212 ELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRG 271
           ELGHMGLP+RAL  FCWA++Q  LFPDDRVLASTVEVL+RNH LK+P++LE F  LASRG
Sbjct: 213 ELGHMGLPERALQAFCWARKQPHLFPDDRVLASTVEVLARNHALKMPLDLERFVGLASRG 272

Query: 272 VLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEE 331
           V+EAM+RGF +GGSL+LA  LL  AKKG R+LDPSVY K++LEL KNPDK++L   LL+E
Sbjct: 273 VIEAMVRGFTKGGSLHLALMLLSKAKKGNRILDPSVYAKVLLELAKNPDKHILAAALLDE 332

Query: 332 LGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDR 391
           LG R+ L L+ QDCT I+KVC +LGKFE  E LY W+ +SGH+PS+VMYT L+HSRY  +
Sbjct: 333 LGDRDDLNLSPQDCTAIMKVCIKLGKFETVEALYKWFRQSGHDPSVVMYTTLIHSRYMAK 392

Query: 392 KYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYR 451
           K+REAL++VWEME  NC FDLPAY VVI+LFVAL DLSRA RYF++LKE+GFSPTY++YR
Sbjct: 393 KHREALAVVWEMEGSNCLFDLPAYRVVIRLFVALNDLSRASRYFSRLKESGFSPTYDIYR 452

Query: 452 NMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQ 487
           ++I +Y+VSGRLAKC+++ KEAE AGF +DKQI S LLQ
Sbjct: 453 DVIELYMVSGRLAKCRDVCKEAEMAGFKLDKQIVSQLLQ 488

[Close]

BLAST of CSPI01G14160 vs. TrEMBL
Match: F6I6T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01200 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 3.1e-160
Identity = 296/476 (62.18%), Postives = 364/476 (76.47%), Query Frame = 1


Query: 20  GIGCQNTIVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFFN--NKTSAPSPPFTDLISS 79
           G+ C   + H      R+P KNL  PRRAKLPP P ++ F    N  +  S   T L   
Sbjct: 42  GVQCNARVNH------RKPTKNLPHPRRAKLPPEPEISTFLKGGNSGTEQSEMGTVLDKE 101

Query: 80  KIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKL 139
               D+   +   +  K+ ++VWDSDEIEAISSLF GRIPQKPGKLNRERPLPLPLP+KL
Sbjct: 102 PDANDDGFLVDGIEGRKEGEIVWDSDEIEAISSLFMGRIPQKPGKLNRERPLPLPLPYKL 161

Query: 140 RPPRLPNPK--IRPTTVV--SSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRW 199
           RP  LP  K  +R  + +  +SRA LSKQVYK PDFLI +AREIR L  E++VS VLN+W
Sbjct: 162 RPMGLPTTKRHVRAASSMPYASRASLSKQVYKNPDFLISIAREIRKLPLEDDVSPVLNKW 221

Query: 200 GPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKV 259
             FL+KGSLSLTI+ELGHMGLP+RAL TF WAQ+Q +LFPDDR+LASTVEVL+R H+LKV
Sbjct: 222 VRFLRKGSLSLTIRELGHMGLPERALQTFFWAQKQPQLFPDDRILASTVEVLARTHKLKV 281

Query: 260 PVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGK 319
           P +LE+FT LASR V+EA+ RGFIR GSL+LAWKLL+ AK  KRML PS+Y KLI ELGK
Sbjct: 282 PFSLEKFTGLASRSVIEALARGFIRRGSLSLAWKLLLVAKDSKRMLGPSIYAKLIFELGK 341

Query: 320 NPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSI 379
           NPDK+ LV  LL+ELG+RE LKL+ QDCT ++KVC RLGKFEI E L++WY +S + PS+
Sbjct: 342 NPDKHSLVQALLDELGEREDLKLSHQDCTAVMKVCIRLGKFEIVESLFNWYKQSENSPSV 401

Query: 380 VMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAK 439
           VMYT L+HSRY+++KYREAL++VWEME+ +C FDLPAY VVIKLF+AL DLSR  RYF+K
Sbjct: 402 VMYTTLIHSRYTEKKYREALAVVWEMEASDCVFDLPAYRVVIKLFIALNDLSRTGRYFSK 461

Query: 440 LKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           LKEAGFSPTY++YR+M+ IY+V  RLAKC+E+ KE E +GF +DK   S LLQ ++
Sbjct: 462 LKEAGFSPTYDIYRDMLKIYMVFRRLAKCREVCKELEMSGFKLDKGTLSQLLQLEK 511

[Close]

BLAST of CSPI01G14160 vs. TrEMBL
Match: A0A061FD99_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_034404 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 5.3e-160
Identity = 289/465 (62.15%), Postives = 365/465 (78.49%), Query Frame = 1


Query: 35  RRRPPKNLLCPRRAKLPPNPAVNQFFNNKTS----APSPPFTDLISSKIFQDEHEEIHAH 94
           R+ P KN   PRR KLPP+  VN F     +    AP     D I S+  ++E E     
Sbjct: 57  RKLPKKNHRYPRRTKLPPDFGVNLFLQEPRTGTDTAPDTQQMDSIPSRSNEEEEESEGKE 116

Query: 95  DYTKDTD--VVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPK-- 154
           +  +D    VVW+SDE+EAISSLF+GRIPQKPGKL R+RPLPLPLP+KLRP   P PK  
Sbjct: 117 EEVEDQGNYVVWESDEVEAISSLFQGRIPQKPGKLGRKRPLPLPLPYKLRPLGSPTPKKH 176

Query: 155 IRPTT--VVSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSL 214
           ++ T+  V+SSRA +SK++YK P FLIGLAREI+DL  +E+VS VL++W  FL+KGSLS+
Sbjct: 177 VKLTSPGVISSRASVSKRLYKNPSFLIGLAREIKDLDSDEDVSAVLDKWARFLRKGSLSM 236

Query: 215 TIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLA 274
           TI+ELGHMGLP RAL TFCWAQ+Q +LFPDDRVL STVEVL+RN ELK+PVNLE+F  L+
Sbjct: 237 TIRELGHMGLPQRALQTFCWAQKQPQLFPDDRVLTSTVEVLARNRELKLPVNLEKFASLS 296

Query: 275 SRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTL 334
           +R ++EAM++GFI+GG+LNLAWKLL  AK+ KRML PS+Y KLILELGKNPDK+ LV  L
Sbjct: 297 NRSLIEAMVKGFIKGGNLNLAWKLLSVAKQSKRMLHPSIYAKLILELGKNPDKHTLVEDL 356

Query: 335 LEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRY 394
           L++LG+RE L L+QQDCT I+K+C RLGKFE  E L++W+ +SG + ++VMYT L+HSRY
Sbjct: 357 LDDLGERENLNLSQQDCTAIMKICIRLGKFETVESLFNWFKQSGRDTTVVMYTTLLHSRY 416

Query: 395 SDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYN 454
           S++KYREAL+LVWEME+  C  DLPAY V IK+FVAL DLSRAVRYF+KLKEAGFSPTY+
Sbjct: 417 SEKKYREALALVWEMEASECLLDLPAYRVAIKVFVALNDLSRAVRYFSKLKEAGFSPTYD 476

Query: 455 VYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           +YR++I+IY+VSGRLAKCKE+ KEAE AGF +DK   + L + ++
Sbjct: 477 IYRDLISIYMVSGRLAKCKEVCKEAEMAGFSLDKHTLAQLSRLEK 521

[Close]

BLAST of CSPI01G14160 vs. TAIR10
Match: AT2G01860.1 (AT2G01860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 499.2 bits (1284), Expect = 2.9e-141
Identity = 261/460 (56.74%), Postives = 335/460 (72.83%), Query Frame = 1


Query: 33  NSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHDY 92
           N  ++  KNL  PRR KLPP+  VN F       P           +  D+ E++     
Sbjct: 36  NHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL----------VIDDDDEQVQESVN 95

Query: 93  TKDTDVVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTV 152
             D  VVW+ +EIEAISSLF+ RIPQKP K +R RPLPLP PHKLRP  LP PK     +
Sbjct: 96  DDDDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLRPLGLPTPK---KNI 155

Query: 153 VSSRAL--LSKQVYKRPDFLIGLAREIRDL-SPEENVSKVLNRWGPFLQKGSLSLTIKEL 212
           + S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN+W  FL+KGSLS TI+EL
Sbjct: 156 IRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVSFLRKGSLSTTIREL 215

Query: 213 GHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVL 272
           GHMGLP+RAL T+ WA++   L PD+R+LAST++VL+++HELK+   L+    LAS+ V+
Sbjct: 216 GHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL---LKFDNSLASKNVI 275

Query: 273 EAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELG 332
           EAM++G I GG LNLA KL++ +K   R+LD SVYVK+ILE+ KNPDK  LV+ LLEEL 
Sbjct: 276 EAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNPDKYHLVVALLEELK 335

Query: 333 QREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKY 392
           +RE LKL+QQDCT+I+K+C +LG+FE+ E L+ W+  S  EPS+VMYT ++HSRYS++KY
Sbjct: 336 KREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVMYTTMIHSRYSEQKY 395

Query: 393 REALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNM 452
           REA+S+VWEME  NC  DLPAY VVIKLFVAL DL RA+RY++KLKEAGFSPTY++YR+M
Sbjct: 396 REAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLKEAGFSPTYDIYRDM 455

Query: 453 ITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           I++Y  SGRL KCKEI KE E+AG  +DK  +  LLQ ++
Sbjct: 456 ISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of CSPI01G14160 vs. TAIR10
Match: AT5G25630.2 (AT5G25630.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 3.3e-12
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 1


Query: 342 TTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMES 401
           T ++ V    G+   A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 402 GNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAK 461
                D   ++ VI  F   G++  AV+   K+KE G +PT + Y  +I  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 462 CKEI 466
             E+
Sbjct: 169 SSEL 172

[Close]

BLAST of CSPI01G14160 vs. TAIR10
Match: AT5G21222.1 (AT5G21222.1 protein kinase family protein)

HSP 1 Score: 66.2 bits (160), Expect = 6.2e-11
Identity = 32/113 (28.32%), Postives = 62/113 (54.87%), Query Frame = 1


Query: 352 GKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAY 411
           G+ + A  +++  +E GH+PS++ YT LV +    + +   LSL+ ++E      D   +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392

Query: 412 SVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKE 465
           + +I      G+L +A++ F K+KE+G  PT + +  +I  Y   G++ K +E
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY---GKIGKLEE 442

[Close]

BLAST of CSPI01G14160 vs. TAIR10
Match: AT5G39980.1 (AT5G39980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-10
Identity = 40/142 (28.17%), Postives = 69/142 (48.59%), Query Frame = 1


Query: 344 IVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGN 403
           +++   R  +F+IA  L+    +    P    Y+ L+ S   +  +  ALS + +ME   
Sbjct: 161 VLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDR 220

Query: 404 CPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCK 463
              DL  YS +I+L   L D S+A+  F++LK +G +P    Y +MI +Y  +    + +
Sbjct: 221 VSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREAR 280

Query: 464 EIYKEAENAGFMMDKQITSMLL 486
            + KE   AG + +    S LL
Sbjct: 281 LLIKEMNEAGVLPNTVSYSTLL 302

[Close]

BLAST of CSPI01G14160 vs. TAIR10
Match: AT3G49730.1 (AT3G49730.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 4.0e-10
Identity = 66/250 (26.40%), Postives = 108/250 (43.20%), Query Frame = 1


Query: 238 LASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKR 297
           L    EVL +  E  +  ++  FT L S         G+   G +  A+ L+   +K  R
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLS---------GYAHAGKMADAYDLMNDMRK--R 311

Query: 298 MLDPSV--YVKLILEL---GKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLG 357
             +P+V  Y  LI  L    K  D+ M V   +E  G        + D  T   + +   
Sbjct: 312 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC-------EADIVTYTALISGFC 371

Query: 358 KFEIAEKLYSWYVE---SGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLP 417
           K+ + +K YS   +    G  PS V Y  ++ +     ++ E L L+ +M+   C  DL 
Sbjct: 372 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 431

Query: 418 AYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEA 477
            Y+VVI+L   LG++  AVR + +++  G SP  + +  MI  +   G L +    +KE 
Sbjct: 432 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 483

Query: 478 ENAGFMMDKQ 480
            + G     Q
Sbjct: 492 VSRGIFSAPQ 483

[Close]

BLAST of CSPI01G14160 vs. NCBI nr
Match: gi|449443604|ref|XP_004139567.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus])

HSP 1 Score: 968.8 bits (2503), Expect = 3.6e-279
Identity = 486/489 (99.39%), Postives = 488/489 (99.80%), Query Frame = 1


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTIVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDSIVSATSVSSILVKGNGGIGCQNT+VHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFRGRIPQKP 120
           NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLF+GRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of CSPI01G14160 vs. NCBI nr
Match: gi|659071841|ref|XP_008462173.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])

HSP 1 Score: 919.8 bits (2376), Expect = 1.9e-264
Identity = 463/489 (94.68%), Postives = 475/489 (97.14%), Query Frame = 1


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTIVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           M SIVSATSVSSILVKGNGGIGCQ T+VHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFRGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLF+GRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of CSPI01G14160 vs. NCBI nr
Match: gi|566173530|ref|XP_002307797.2| (hypothetical protein POPTR_0005s27370g [Populus trichocarpa])

HSP 1 Score: 583.9 bits (1504), Expect = 2.5e-163
Identity = 294/455 (64.62%), Postives = 362/455 (79.56%), Query Frame = 1


Query: 36  RRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKD 95
           R+ PKN+  PRR+KLPP+  VN F     +      +D ++    ++E EEI  ++    
Sbjct: 11  RKIPKNIRYPRRSKLPPDFGVNLFLKKPQTDSVQDHSDDLTE---EEEEEEIEVNN---- 70

Query: 96  TDVVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVS- 155
            ++VW+S+EIEAISSLFRGRIPQKPGKL RERPLPLP+P+KLRP  LP PK      VS 
Sbjct: 71  GEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPVPYKLRPLGLPAPKKHVNKQVSL 130

Query: 156 SRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGL 215
           SRA +S Q+YK P FLIGLA+EI+ LSP+++VS VL+    +L KGSLSLTI+ELGH+GL
Sbjct: 131 SRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDNCSRYLHKGSLSLTIRELGHLGL 190

Query: 216 PDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMR 275
           P+RAL TFCW Q+Q RLFPDDRVLASTVEVL+RNH+LKVP NLE+FT LASR V+EAM++
Sbjct: 191 PERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLKVPFNLEKFTNLASRRVIEAMVK 250

Query: 276 GFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREAL 335
           G IRGGSL LAWKL+  AK GKRMLDPSVY K+ILELGKNPDK++L   LL+EL +RE L
Sbjct: 251 GLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELGKNPDKHVLAEALLDELAEREDL 310

Query: 336 KLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALS 395
            L+QQDCT ++KVC +LGKFE  E L++W+ +SGHEPS+VMYT L+HSRYS+ KYREAL+
Sbjct: 311 NLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPSVVMYTTLIHSRYSESKYREALA 370

Query: 396 LVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYL 455
           +VWEME  +C FDL AY VVIKLFVAL DL RAVRYF+KLKEAG SPTY++YRN+IT+Y+
Sbjct: 371 VVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLITLYM 430

Query: 456 VSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           VSGRLAKCKE++KEAE AGF   K++ + LLQ KR
Sbjct: 431 VSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458

[Close]

BLAST of CSPI01G14160 vs. NCBI nr
Match: gi|703064678|ref|XP_010087262.1| (hypothetical protein L484_003157 [Morus notabilis])

HSP 1 Score: 579.7 bits (1493), Expect = 4.8e-162
Identity = 290/459 (63.18%), Postives = 357/459 (77.78%), Query Frame = 1


Query: 32  ANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHD 91
           + +RR+ P NL  PRR KLPP+   N F  N T+     +   I   +  DE E+    +
Sbjct: 33  SRTRRKIPNNLRYPRRGKLPPDLGANLFLKNTTNTTKESYQPGI---MINDEEEDQEQDE 92

Query: 92  YTKDTDVVWDSDEIEAISSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPT- 151
              D D+VW+SDEIEAI+SLFRGRIPQKPGKLNRERPLPLPLP+K+RP RLP PK R   
Sbjct: 93  NDDDDDIVWESDEIEAIASLFRGRIPQKPGKLNRERPLPLPLPYKIRPLRLPMPKKRTKM 152

Query: 152 ---TVVSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIK 211
               + SSR  LSK+VYK P  L GLAREI+ L  EE+VS VL++WG FL+KGSLS+TI+
Sbjct: 153 ASPVLFSSREPLSKKVYKSPGVLTGLAREIKSLPEEEDVSSVLDKWGQFLRKGSLSMTIR 212

Query: 212 ELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRG 271
           ELGHMGLP+RAL  FCWA++Q  LFPDDRVLASTVEVL+RNH LK+P++LE F  LASRG
Sbjct: 213 ELGHMGLPERALQAFCWARKQPHLFPDDRVLASTVEVLARNHALKMPLDLERFVGLASRG 272

Query: 272 VLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEE 331
           V+EAM+RGF +GGSL+LA  LL  AKKG R+LDPSVY K++LEL KNPDK++L   LL+E
Sbjct: 273 VIEAMVRGFTKGGSLHLALMLLSKAKKGNRILDPSVYAKVLLELAKNPDKHILAAALLDE 332

Query: 332 LGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDR 391
           LG R+ L L+ QDCT I+KVC +LGKFE  E LY W+ +SGH+PS+VMYT L+HSRY  +
Sbjct: 333 LGDRDDLNLSPQDCTAIMKVCIKLGKFETVEALYKWFRQSGHDPSVVMYTTLIHSRYMAK 392

Query: 392 KYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYR 451
           K+REAL++VWEME  NC FDLPAY VVI+LFVAL DLSRA RYF++LKE+GFSPTY++YR
Sbjct: 393 KHREALAVVWEMEGSNCLFDLPAYRVVIRLFVALNDLSRASRYFSRLKESGFSPTYDIYR 452

Query: 452 NMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQ 487
           ++I +Y+VSGRLAKC+++ KEAE AGF +DKQI S LLQ
Sbjct: 453 DVIELYMVSGRLAKCRDVCKEAEMAGFKLDKQIVSQLLQ 488

[Close]

BLAST of CSPI01G14160 vs. NCBI nr
Match: gi|743895877|ref|XP_011041213.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Populus euphratica])

HSP 1 Score: 578.6 bits (1490), Expect = 1.1e-161
Identity = 298/492 (60.57%), Postives = 376/492 (76.42%), Query Frame = 1


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTIVHFKANSR---RRPPKNLLCPRRAKLPPNPAVN 60
           MD  +++ S+  IL   +  +   + I+    ++R   R+ PKN+  PRR+KLPP+  VN
Sbjct: 5   MDWKLTSISLQPILPTASNVLKSSSMILMAHCSTRICYRKIPKNIRYPRRSKLPPDFGVN 64

Query: 61  QFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFRGRIP 120
            F       P        S  + ++E EEI  ++     ++VW+S+E+EAISSLFRGRIP
Sbjct: 65  LFLKK----PQIDSVQDHSDDLTKEEEEEIEVNN----GEIVWESEELEAISSLFRGRIP 124

Query: 121 QKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVS-SRALLSKQVYKRPDFLIGLARE 180
           QKPGKL RERPLPLP+P+KLRP  LP PK      VS SRA +S Q+YK P FLIGLA+E
Sbjct: 125 QKPGKLGRERPLPLPVPYKLRPLGLPAPKKHVNKQVSLSRASISNQIYKNPSFLIGLAKE 184

Query: 181 IRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDR 240
           I+ LSP+++VS VL++   +L KGSLSLTI+ELGH+GLP+RAL TFCW Q+Q RLFPDDR
Sbjct: 185 IKRLSPDQDVSVVLDKCSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQSRLFPDDR 244

Query: 241 VLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGK 300
           VLASTVEVL+RN +LKVP NLE+FT LASR V+EAM++G IRGGSL LAWKL+  AK GK
Sbjct: 245 VLASTVEVLARNDDLKVPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGK 304

Query: 301 RMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEI 360
           RMLDPSVY K+ILELGKNPDK++L   LL+EL +RE L L+QQDCT ++KVC +LGKFE 
Sbjct: 305 RMLDPSVYAKIILELGKNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEA 364

Query: 361 AEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIK 420
            E L++W+ +SGH+PS+VMYT L+HSRYS+ KYREAL++VWEME  +C FDL AY VVIK
Sbjct: 365 VESLFNWFRQSGHDPSVVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIK 424

Query: 421 LFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMM 480
           LFVAL DL RAVRYF+KLKEAG SPTY++YRN+IT+Y+VSGRLAKCKE++KEAE AGF  
Sbjct: 425 LFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKF 484

Query: 481 DKQITSMLLQAK 489
            K++ + LLQ K
Sbjct: 485 SKEMAAGLLQLK 488

The following BLAST results are available for this feature:

BLAST of CSPI01G14160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP142_ARATH	5.1e-140	56.74	Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN...	[more]
PP397_ARATH	5.9e-11	28.23	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN...	[more]
PP395_ARATH	1.1e-09	28.32	Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN...	[more]
PP408_ARATH	5.5e-09	28.17	Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop...	[more]
PP275_ARATH	7.2e-09	26.40	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN...	[more]

BLAST of CSPI01G14160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVM0_CUCSA	2.5e-279	99.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1	[more]
B9H5I8_POPTR	1.8e-163	64.62	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2	[more]
W9QJX3_9ROSA	3.3e-162	63.18	Uncharacterized protein OS=Morus notabilis GN=L484_003157 PE=4 SV=1	[more]
F6I6T6_VITVI	3.1e-160	62.18	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01200 PE=4 SV=...	[more]
A0A061FD99_THECC	5.3e-160	62.15	Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0344...	[more]

BLAST of CSPI01G14160 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01860.1	2.9e-141	56.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	3.3e-12	28.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G21222.1	6.2e-11	28.32	protein kinase family protein	[more]
AT5G39980.1	3.1e-10	28.17	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49730.1	4.0e-10	26.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CSPI01G14160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443604\|ref\|XP_004139567.1\|	3.6e-279	99.39	PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativu...	[more]
gi\|659071841\|ref\|XP_008462173.1\|	1.9e-264	94.68	PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo]	[more]
gi\|566173530\|ref\|XP_002307797.2\|	2.5e-163	64.62	hypothetical protein POPTR_0005s27370g [Populus trichocarpa]	[more]
gi\|703064678\|ref\|XP_010087262.1\|	4.8e-162	63.18	hypothetical protein L484_003157 [Morus notabilis]	[more]
gi\|743895877\|ref\|XP_011041213.1\|	1.1e-161	60.57	PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Populus euphra...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G14160.1	CSPI01G14160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 330..380 score: 0.01coord: 395..452 score: 0.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 410..442 score: 0
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 372..406 score: 7.487coord: 337..371 score: 8.813coord: 265..299 score: 5.382coord: 407..441 score: 9.986coord: 442..476 score: 7
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 347..469 score: 1.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 33..52 score: 9.9E-186coord: 175..487 score: 9.9E-186coord: 117..146 score: 9.9E
None	No IPR available	PANTHER	PTHR24015:SF642	SUBFAMILY NOT NAMED	coord: 33..52 score: 9.9E-186coord: 175..487 score: 9.9E-186coord: 117..146 score: 9.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G14160	Csa1G144300	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G14160	MELO3C004826	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G14160	ClCG01G012950	Watermelon (Charleston Gray)	cpiwcgB027
CSPI01G14160	Lsi03G000760	Bottle gourd (USVL1VR-Ls)	cpilsiB046
CSPI01G14160	MELO3C004826.2	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G14160	CsaV3_1G014370	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G14160	Cla97C01G013200	Watermelon (97103) v2	cpiwmbB002
CSPI01G14160	Bhi08G000095	Wax gourd	cpiwgoB049
CSPI01G14160	Cucsa.200220	Cucumber (Gy14) v1	cgycpiB318
CSPI01G14160	CsGy1G014140	Cucumber (Gy14) v2	cgybcpiB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G14160	Silver-seed gourd	carcpiB0192
CSPI01G14160	Watermelon (97103) v2	cpiwmbB026
CSPI01G14160	Cucurbita maxima (Rimu)	cmacpiB163
CSPI01G14160	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G14160	Cucurbita moschata (Rifu)	cmocpiB148
CSPI01G14160	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G14160	Watermelon (97103) v1	cpiwmB070
CSPI01G14160	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G14160	Cucurbita pepo (Zucchini)	cpecpiB809
CSPI01G14160	Bottle gourd (USVL1VR-Ls)	cpilsiB006