Lsi02G016250 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G016250
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTranscription initiation factor TFIID subunit 7
Locationchr02 : 22146003 .. 22152460 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTCCACTCTAAACTAAAATTCTCCACTCTCTTCTCTTTCTCTCTGCAATGGCAGCAACCATTTCCACAATCTTTCTGATATCGTTCTCTAATTTGTTGCTAATAATATCACTAGCCGTGGAAAGCAGAGCACTTACCGGAGGTGTTTACGGCGCCGGACCATGGCAGAATGCCCACGCTACTTTCTACGGCGGCAATGACGCCTCCGGCACAATGGGTATTCTCAAAATTTCAATCTCCTTTTCAAAAACCATTACGATTTCATTATAATTTCAAAACATTACATACATTTTTTTTGCTCTGCTCTGCAGGCGGGGCGTGTGGTTATGGTAACTTGTACAGCCAAGGCTACGGCGTGAACACGGCGGCGCTCAGCACAGCTCTGTTCAACGACGGCTATAGCTGTGGAGCTTGTTTTGAGATCAAGTGCGTGAATGACCCACAATGGTGTCATGCCGGTAACCCCTCCATCTTTGTCACAGCCACCAATTTTTGTCCTCCCAATTACGCTCTGCCTAACGACAATGGCGGCTGGTGCAATCCTCCTCGCCCTCACTTTGACCTCTCCATGCCCATGTTTCTTAAGATCGCCCAATATCGCGCCGGTATTGTCCCTGTTTCCTTTCGCAGGTAAATAACGAAACACAATTCTTAATATTAATTTTGTTTGTATGTTTTAAAGTAAAACCGTCAGTCACATTGTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTAATTTGATTTGGCCAGAGTGGCATGTCGGAGGGAGGGAGGGATGAGATTTACAATCAATGGGTTCAAATATTTCAATTTGGTATTGATAACCAACGTGGCAGGAGCAGGGGATATTGTGAGTGTGAGCATCAAGGGGTCGAAGACAGGATGGATGAGTATGACACGTAATTGGGGTCAAAACTGGCAGTCAAATACTGTTTTGGTGGGTCAATCACTTTCGTTTAGTGTCAAAGCTAGTGATGGTCGGATTTCAACTTCCTCCAATATTGTTCCTTCTCATTGGCAATTTGGTCAAACTTTCACTGGCAAAAACTTCTAATTCTTAATTTTGAGTCTGCTTGGATTAAAACAAAAATGATGGAATTTGATGTTGTAATGAAGTTTAATCTTTTAAGTTAGTGGTAATGATTCCATATAAGTATATCTACTATGACATCATAATTGGTTGTAAATTGGTTATATCTTTTTCAATTATAAACCAATGCTGATTGTTATCGATTGCTTTTAAGATCTTCAAATATTCACTTCATTATTAATATCAATACTAAACATTGACTTCCATAATAATACATAATCAACTTTTCTTTTCGTGTAATCTAGTCGAATTTGTAATATTTTAATTAAGGGGAAGTTTTAAAAATAGAAAAATAAGGTAAACTATTTACACAAAATAACAAAATTTTTAAATAGTTGTGATAGACACTGATAGAAGTCTATCAGAATCTATTAGTGATAGGAATGATAGAAATCTATCACTAATAGATGCTGATAGAAGTCTATCAATGTCTATCAGTATTTTTTTTGCTATTTTATGTAAATAGTTTGACATTTTTTTTATTTGTGAAAATTTCTCTTTAATTAATTGAGTTAGGTTGAATATGTTATTAATTTAAAACTTATTGATATAATAATTTGTAGATTTAGACCAATCTTGTTTTTATTGATATTTGATCATATAGACATTACTTATAAATAACTAATTTCAACATGAATTTCCCACTACAACCATGCATTCTTAAAAAAAAAATTGAATAATCAATAAATTCCTAAAATTTTAAAAAGTCAGGAGAGTGTTAAATAAATTATCAATAGAGATAAAAGATATTGCATAACAACCTCAAATTTGGCGATCACTACATTACAAACTTGAACTCCATTGCTACTTTAAACATTACCAACTCACTTCCAACTAGGCCATGTATGCTCAACTAGCCATTGCTCCTCATTCGCAAATTGGTAACAATAACACTTATTAAAACTTAATGCTTGAATTAATAAAACTAAATCGTAAGGTTGAAATGGACTAAGAAAAATCAATCTAAGTACAACTAATTAATTAAAGAATATATGTTTGACTAAGAGGTTAGATGTTCAAATCTTTTGCCAACAAGAGTTTAGCTCAACTGACATTTGTATGTGTTAATGGCCAAGAGGCTCGTGATTCAAATCCCTCACTCCCATTTGTACTAAAAAAAATGATAGAAGTCTATCAGGGTCTATCAGTGATAGAAATGATAAAGTCTATCACTGATAGATGCTTATAGAAGTCTATTAATGTCTATCATTATTTTTTTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTTCTATAAGTGAAACTTTCCCTTAATTTGACCTCTTAATTATGCAATAGTATATAATTAAACATCATAAATGAACTAATTAAAATGAAAGGTTTTAAGGAGAAAAATCAATTTATACCCTTACACTTTAGAGGTTGTATATCATTACAACTATAAACCAATATCAATTCAAATTCTAAAATTTTTAGGTGAATTAATATAGATGATCTGTTAATAAATTATAACTCTTTTCACTCGATTTCATTTTCAACTACCTTAAAATCACCTAATAAAATTTTTTTCTTTCAAAATGCTATCAAGATGACCCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAAAAAAAAAAAAAAAAAAAACTTATATGACGTAATTCTTCATTAATACGTAAAAAAATATATAAGAAAACAAGAAGATGAAAAACTGCATTAAAACTCTAACTATAGTAAAAAGAGATTGACGTTTTTATTTTAATTAAAATAATTATTAGTTTAAGGTTTTAATTTATAAATTGATTTTCAAGTAATTTTAAAAGTCGAGTTTAAGTAAGATGGAATTTTCTGGATCTGTCTCTCGAGTCTCCGACTCCCTCCCCCGCGCAATCGGTATCCCTCCATCTGTATATCTTGCTCAGCTATCCCGTCGATTCGTGTCTCGCCGGTGGAAATCATCAAAAGAATGGGACAGTTTTAATCACTCTGGTACGAGGGCTGTTTCAAGCTCAAAGCAAAGGACAGAAAACTTCACAACAACCACACCCTTCGAGCATTCAAGGTAATTGGGATAAAAATTGAACGAATTTTTGTTTGGAGACCCATTTGTCCAGATTTGATAACCCAAATGACACTATTTTTAGAACCCCATTGCTAAGTTTTCAGCTTTTTTGAAGACTATCTGAATCCGTGAGGCTAAGGTGTAGGGTTTTTATGAGACCAGAAAGTAGCGCAGCTCGAGGGACGGAGGTATTTTTCTTCTCATCGCATTGTGTAAGGAGTTCTTTTGCTAGATAATTGATTCGTTTTCTTCTTTTTCCCTTACTTTCTCTATTGCGCATGGATTTTGTAAAATCCGAGTAATTTTTCGTCAGATTATGTTTCTTTCTTCCCATGGTGTTTGGTTAGAGTCAGATTTTCTTTCACTATCCTCTTACTTTCCAGCTTTTTATTGTTGGCTGTTGCTAATTGGATGTTTATTGGTTGGACTATTTACCCTGTTGTTTTCCCTTGGGAGTGATATTGTATTATTTGTGTTTCGTTTTTAGGCTCATATTCTTCTCCAACCATCACACAACCTTGTAGTTAATGAACTTTGCTCCCTATAGAAGTCTTTAAAGGACAGCAATACTTTTTTTCCCCCCTTTGTCAAATGATAATTTGGTGTATCAATCTTTGAAAGAATGAAATGCTTTTATGGCAATTCTTGCGAGCCTGGTTCTATTTATGATTGTTGATCTTCTCTGTGCTGCAGTTTTTTTCGAGTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTACTGAGAGTTCCACCTTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGAAGATGCGTCATTGGATTTGTCTTTCTCTGGTAAAAGAACTTATACAGTCATCTTCTGATTCATTCTGCCCGTTCCGTGCTTTTTCCATTACATTTGCTGTGATGTTTGATGAATGGAAGAAGTAGAACTCTTAGATTTTTGGACAGATTAGCTTTGTTGCCTCTTAAAGAAACAAAAGTAACTTCTCATACAAAGCTTTCTTTTAATTTTTTGTTTTACTCCGACTTTTTTCATTTTGTCGATGATTGCCAGTGTGTGCTTCATAGACTAAGTTTTGCACATAGTTTATTTCACTTTTGCCATGTGCCTGTCTGGTTCTGGAGGAGATTTGGAATTGTGGATCTCTTTACTCCTTTCCTCAAGGAAGCATTTTCATTCTACTTTTGATATAGATGTAGGTGTTAGTTATTGTGTATGGATTTCTATCTGATTCTTAAATTAGCCAAATATTTGTTTGCTATAGTACTTTATGGAAAAGAAATTTGGCAGTGATATTGGGAGGTAGAGAGAGATTTGGAAATAGATCAAATTGTGCAGTATGATTTTGTTTTAATTTGAGAGGCTTATCTCAATTGCCTATATATGGCCTCTTATATTGTCATCCAGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTACTGGATCTCCCTTGTGTAGTGGAATCCTACAAAACATACGATGATACTGTTCTAATCAAAGCCGCAGACATTGGTCAGGTAAAATGGTATTAAAATGGTTGGCACATGCATTTAGAATGACATGACCACTCCATTTCTTATGTTTTATGGGTTGATGTTTTTTTGAACAGATGATTATGGTTAGAGAACCGGGTGACCCTGCTCCAGATTCAACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGACGAGAGCCAGATTTAAATGTATGGTGTTCTTATCTCTCTTCCTATTAGTTTCATGTAGGATTTTCTTATGAGCAAAAGTAATTTGCTGTACATCATATAAACTGAGATTTCTACTAATACAATGAATAGGTAGTCAGGGATAAATTATTGAATGATGCAAGTACAATATAGTTACATAGTTTGTGCTTTACATGTTTATCTCATATATAAAGCTTAGATTAACATTAATCTCTTAATTTTTTGGTCAATAGTGGCATGTTAAGCTCCCTTTTCTTTTCTCCATCTTTTCCATAATAGTCAGTCTACGTTTGCATTTGTTCTTCATATCAAAATTTGTCGCATCGAGAAAGGTGTCTCTTGATTCTAACATACATGATTCTCAAGGTTGTTAAATCGTGAAATGAAACATATATCGAAATGAAATTTTAGTGTATTGTGTATTGTAAATAACATTGAAATATAAATATAAAATAACGGAGCCTTAATGATTCTGTTTTTTCTTTTTCTTTTTTGGCAGCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACCGAAAATGCAGATATCCTTGATACTTTATGTTTTTCAGTTTCATTTGTGTTTTAAACTCATTAGCATATTGGTTCATGAAACAAAACATGTATCCATTCCGCCCCCACCTCAACCTGCATCGTAAAGATTGTTAGCCTAATAACTATGGCAGATAGAGAATTATTTTAATTGGCCCTCACATGAAATTCTTGATTGAAAAATTTGAAAGACGTACAACACAAAACCTTTTTGCTTGTCTTCTTCTGACATAAGTTATATGATCTTATGCTGCAATTTAACTTTAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTCATCATGCAAGTGCAAAGCCTGCATCCGCACCTGTGGCAAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGGGAGCCTGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGTTTAG

mRNA sequence

CATTTCCACTCTAAACTAAAATTCTCCACTCTCTTCTCTTTCTCTCTGCAATGGCAGCAACCATTTCCACAATCTTTCTGATATCGTTCTCTAATTTGTTGCTAATAATATCACTAGCCGTGGAAAGCAGAGCACTTACCGGAGGTGTTTACGGCGCCGGACCATGGCAGAATGCCCACGCTACTTTCTACGGCGGCAATGACGCCTCCGGCACAATGGGCGGGGCGTGTGGTTATGGTAACTTGTACAGCCAAGGCTACGGCGTGAACACGGCGGCGCTCAGCACAGCTCTGTTCAACGACGGCTATAGCTGTGGAGCTTGTTTTGAGATCAAGTGCGTGAATGACCCACAATGGTGTCATGCCGGTAACCCCTCCATCTTTGTCACAGCCACCAATTTTTGTCCTCCCAATTACGCTCTGCCTAACGACAATGGCGGCTGGTGCAATCCTCCTCGCCCTCACTTTGACCTCTCCATGCCCATGTTTCTTAAGATCGCCCAATATCGCGCCGGTATTGTCCCTGTTTCCTTTCGCAGTAAGATGGAATTTTCTGGATCTGTCTCTCGAGTCTCCGACTCCCTCCCCCGCGCAATCGGTATCCCTCCATCTGTATATCTTGCTCAGCTATCCCGTCGATTCGTGTCTCGCCGGTGGAAATCATCAAAAGAATGGGACAGTTTTAATCACTCTGGTACGAGGGCTGTTTCAAGCTCAAAGCAAAGGACAGAAAACTTCACAACAACCACACCCTTCGAGCATTCAAGACTATCTGAATCCGTGAGGCTAAGGTGTAGGGTTTTTATGAGACCAGAAAGTAGCGCAGCTCGAGGGACGGAGATGATTATGGTTAGAGAACCGGGTGACCCTGCTCCAGATTCAACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGACGAGAGCCAGATTTAAATGATGATAGAGATGAGAATCCTCATCATGCAAGTGCAAAGCCTGCATCCGCACCTGTGGCAAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGGGAGCCTGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGTTTAG

Coding sequence (CDS)

ATGGCAGCAACCATTTCCACAATCTTTCTGATATCGTTCTCTAATTTGTTGCTAATAATATCACTAGCCGTGGAAAGCAGAGCACTTACCGGAGGTGTTTACGGCGCCGGACCATGGCAGAATGCCCACGCTACTTTCTACGGCGGCAATGACGCCTCCGGCACAATGGGCGGGGCGTGTGGTTATGGTAACTTGTACAGCCAAGGCTACGGCGTGAACACGGCGGCGCTCAGCACAGCTCTGTTCAACGACGGCTATAGCTGTGGAGCTTGTTTTGAGATCAAGTGCGTGAATGACCCACAATGGTGTCATGCCGGTAACCCCTCCATCTTTGTCACAGCCACCAATTTTTGTCCTCCCAATTACGCTCTGCCTAACGACAATGGCGGCTGGTGCAATCCTCCTCGCCCTCACTTTGACCTCTCCATGCCCATGTTTCTTAAGATCGCCCAATATCGCGCCGGTATTGTCCCTGTTTCCTTTCGCAGTAAGATGGAATTTTCTGGATCTGTCTCTCGAGTCTCCGACTCCCTCCCCCGCGCAATCGGTATCCCTCCATCTGTATATCTTGCTCAGCTATCCCGTCGATTCGTGTCTCGCCGGTGGAAATCATCAAAAGAATGGGACAGTTTTAATCACTCTGGTACGAGGGCTGTTTCAAGCTCAAAGCAAAGGACAGAAAACTTCACAACAACCACACCCTTCGAGCATTCAAGACTATCTGAATCCGTGAGGCTAAGGTGTAGGGTTTTTATGAGACCAGAAAGTAGCGCAGCTCGAGGGACGGAGATGATTATGGTTAGAGAACCGGGTGACCCTGCTCCAGATTCAACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGACGAGAGCCAGATTTAAATGATGATAGAGATGAGAATCCTCATCATGCAAGTGCAAAGCCTGCATCCGCACCTGTGGCAAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGGGAGCCTGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGTTTAG

Protein sequence

MAATISTIFLISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRSKMEFSGSVSRVSDSLPRAIGIPPSVYLAQLSRRFVSRRWKSSKEWDSFNHSGTRAVSSSKQRTENFTTTTPFEHSRLSESVRLRCRVFMRPESSAARGTEMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNDDRDENPHHASAKPASAPVAKPDVMETETNVGEPERSDSDDSDHSIV
Homology
[Close]
BLAST of Lsi02G016250 vs. Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 1.1e-67
Identity = 114/147 (77.55%), Postives = 132/147 (89.80%), Query Frame = 1 

Query: 16  LLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTA 75
           L ++ ++   S A   GVY  G W+ AHATFYGG+DASGTMGGACGYGNLYSQGYGVNTA
Sbjct: 8   LSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTA 67

Query: 76  ALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPP 135
           ALSTALFN+G+SCGACFE+KC +DP+WCH+G+PSIF+TATNFCPPN+A P+DNGGWCNPP
Sbjct: 68  ALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPP 127

Query: 136 RPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           RPHFDL+MPMFLKIA+YRAGIVPVSFR
Sbjct: 128 RPHFDLAMPMFLKIAEYRAGIVPVSFR 154

[Close]
BLAST of Lsi02G016250 vs. Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.6e-66
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 1 

Query: 32  GVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGYSCGAC 91
           G+Y  G WQNAHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G SCGAC
Sbjct: 24  GIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGAC 83

Query: 92  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 151
           FE+KC NDPQWCH+G+PSI +TATNFCPPN A P+DNGGWCNPPR HFDL+MP+FLKIAQ
Sbjct: 84  FELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQ 143

Query: 152 YRAGIVPVSFR 163
           YRAGIVPVS+R
Sbjct: 144 YRAGIVPVSYR 154

[Close]
BLAST of Lsi02G016250 vs. Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.0e-65
Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 22  LAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTAL 81
           L   + A   GVY  GPWQNAHATFYGG+DASGTMGGACGYGNLYSQGYGVNTAALSTAL
Sbjct: 19  LLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTAL 78

Query: 82  FNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDL 141
           FN+G+SCGACFEIKC +DP+WC  GNPSI VTATNFCPPN+A P+D+GGWCNPPR HFDL
Sbjct: 79  FNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDL 138

Query: 142 SMPMFLKIAQYRAGIVPVSFR 163
           +MPMFLKI  YRAGIVPVS+R
Sbjct: 139 AMPMFLKIGLYRAGIVPVSYR 159

[Close]
BLAST of Lsi02G016250 vs. Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.7e-65
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 1 

Query: 32  GVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGYSCGAC 91
           G YG G WQ+AHATFYGG+DASGTMGGACGYGNLYSQGYGVN AALSTALFN G SCGAC
Sbjct: 29  GAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGAC 88

Query: 92  FEIKCVNDP--QWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKI 151
           FEIKCVN P  +WCH G+PSI +TATNFCPPNYALP+DNGGWCNPPRPHFDL+MPMFL I
Sbjct: 89  FEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHI 148

Query: 152 AQYRAGIVPVSFR 163
           A+YRAGIVPVS+R
Sbjct: 149 AEYRAGIVPVSYR 161

[Close]
BLAST of Lsi02G016250 vs. Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-64
Identity = 115/158 (72.78%), Postives = 132/158 (83.54%), Query Frame = 1 

Query: 5   ISTIFLISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGN 64
           I+ + L++   L L++S    + A    V+  G WQ AHATFYGGNDASGTMGGACGYGN
Sbjct: 3   INPLILLTIFPLFLLLSF---TDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGN 62

Query: 65  LYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYAL 124
           LYSQGYG NTAALST+LFN G SCGACFEIKCVNDP+WCH GNPS+FVTATNFCPPN A 
Sbjct: 63  LYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQ 122

Query: 125 PNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           P+DNGGWCNPPR HFDL+MP+FLKIA+YRAGIVP+S+R
Sbjct: 123 PSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYR 157

[Close]
BLAST of Lsi02G016250 vs. TrEMBL
Match: A0A0A0KNX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517210 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 9.9e-84
Identity = 149/162 (91.98%), Postives = 154/162 (95.06%), Query Frame = 1 

Query: 1   MAATISTIFLISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGAC 60
           M  TISTIFLISFSN LL +SL  E+RAL GG++GAGPW NAHATFYGGNDA+GTMGGAC
Sbjct: 1   MVPTISTIFLISFSNFLLTMSLPFENRALIGGLHGAGPWHNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 162

[Close]
BLAST of Lsi02G016250 vs. TrEMBL
Match: Q8W5A9_CUCSA (Alpha-expansin 4 OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73
Identity = 131/143 (91.61%), Postives = 136/143 (95.10%), Query Frame = 1 

Query: 20  ISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALST 79
           +SL  E+RAL GG++GAGPW NAHATFYGGNDA+GTMGGACGYGNLYSQGY VNTAALST
Sbjct: 1   MSLPFENRALIGGLHGAGPWHNAHATFYGGNDAAGTMGGACGYGNLYSQGYAVNTAALST 60

Query: 80  ALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHF 139
           ALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND  GWCNPPRPHF
Sbjct: 61  ALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND--GWCNPPRPHF 120

Query: 140 DLSMPMFLKIAQYRAGIVPVSFR 163
           DLSMPMFLKIAQYRAGIVPVSFR
Sbjct: 121 DLSMPMFLKIAQYRAGIVPVSFR 141

[Close]
BLAST of Lsi02G016250 vs. TrEMBL
Match: A0A0R0HKK8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G219400 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.6e-70
Identity = 124/151 (82.12%), Postives = 138/151 (91.39%), Query Frame = 1 

Query: 15  NLLLIISLA---VESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYG 74
           N++ I+SL    + S+A   GVY  GPWQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG
Sbjct: 5   NIIAIVSLLLLMIPSQAKIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYG 64

Query: 75  VNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGW 134
           VNTAALSTALFN+G+SCGACFEIKC +DP+WCH GNPSIFVTATNFCPPNYALP+DNGGW
Sbjct: 65  VNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTATNFCPPNYALPSDNGGW 124

Query: 135 CNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           CNPPRPHFDL+MPMFLKIAQYRAGIVPVS+R
Sbjct: 125 CNPPRPHFDLAMPMFLKIAQYRAGIVPVSYR 155

[Close]
BLAST of Lsi02G016250 vs. TrEMBL
Match: A0A0B2QD56_GLYSO (Expansin-A3 OS=Glycine soja GN=glysoja_017975 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.7e-70
Identity = 125/153 (81.70%), Postives = 140/153 (91.50%), Query Frame = 1 

Query: 10  LISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQG 69
           +I+  +LLL+I   + S+A   GVY  GPWQ+AHATFYGG+DASGTMGGACGYGNLYSQG
Sbjct: 6   IIAIVSLLLLI---IPSQAKIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQG 65

Query: 70  YGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNG 129
           YGVNTAALSTALFN+G+SCGACFEIKC +DP+WCH GNPSIFVTATNFCPPNYALP+DNG
Sbjct: 66  YGVNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTATNFCPPNYALPSDNG 125

Query: 130 GWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           GWCNPPRPHFDL+MPMFLKIAQYRAGIVPVS+R
Sbjct: 126 GWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYR 155

[Close]
BLAST of Lsi02G016250 vs. TrEMBL
Match: A0A0D2VS58_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G266000 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 8.1e-70
Identity = 124/146 (84.93%), Postives = 136/146 (93.15%), Query Frame = 1 

Query: 17  LLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAA 76
           L+IIS AVE+R    GVY  G WQ+AHATFYGGNDASGTMGGACG+GNLYSQGYGVNTAA
Sbjct: 12  LIIISTAVEARI--PGVYSGGAWQSAHATFYGGNDASGTMGGACGFGNLYSQGYGVNTAA 71

Query: 77  LSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPR 136
           LSTALFN+G+SCGACFEIKC NDPQWCH+G+PSIF+TATNFCPPNYALPNDNGGWCNPPR
Sbjct: 72  LSTALFNNGFSCGACFEIKCANDPQWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPR 131

Query: 137 PHFDLSMPMFLKIAQYRAGIVPVSFR 163
            HFDL+MPMFLKIA+YRAGIVPVS+R
Sbjct: 132 SHFDLAMPMFLKIAEYRAGIVPVSYR 155

[Close]
BLAST of Lsi02G016250 vs. TAIR10
Match: AT2G28950.1 (AT2G28950.1 expansin A6)

HSP 1 Score: 258.5 bits (659), Expect = 6.1e-69
Identity = 114/147 (77.55%), Postives = 132/147 (89.80%), Query Frame = 1 

Query: 16  LLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTA 75
           L ++ ++   S A   GVY  G W+ AHATFYGG+DASGTMGGACGYGNLYSQGYGVNTA
Sbjct: 8   LSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTA 67

Query: 76  ALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPP 135
           ALSTALFN+G+SCGACFE+KC +DP+WCH+G+PSIF+TATNFCPPN+A P+DNGGWCNPP
Sbjct: 68  ALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPP 127

Query: 136 RPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           RPHFDL+MPMFLKIA+YRAGIVPVSFR
Sbjct: 128 RPHFDLAMPMFLKIAEYRAGIVPVSFR 154

[Close]
BLAST of Lsi02G016250 vs. TAIR10
Match: AT2G39700.1 (AT2G39700.1 expansin A4)

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-67
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 1 

Query: 32  GVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGYSCGAC 91
           G+Y  G WQNAHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G SCGAC
Sbjct: 24  GIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGAC 83

Query: 92  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 151
           FE+KC NDPQWCH+G+PSI +TATNFCPPN A P+DNGGWCNPPR HFDL+MP+FLKIAQ
Sbjct: 84  FELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQ 143

Query: 152 YRAGIVPVSFR 163
           YRAGIVPVS+R
Sbjct: 144 YRAGIVPVSYR 154

[Close]
BLAST of Lsi02G016250 vs. TAIR10
Match: AT2G37640.1 (AT2G37640.1 Barwin-like endoglucanases superfamily protein)

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-67
Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 22  LAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTAL 81
           L   + A   GVY  GPWQNAHATFYGG+DASGTMGGACGYGNLYSQGYGVNTAALSTAL
Sbjct: 19  LLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTAL 78

Query: 82  FNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDL 141
           FN+G+SCGACFEIKC +DP+WC  GNPSI VTATNFCPPN+A P+D+GGWCNPPR HFDL
Sbjct: 79  FNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDL 138

Query: 142 SMPMFLKIAQYRAGIVPVSFR 163
           +MPMFLKI  YRAGIVPVS+R
Sbjct: 139 AMPMFLKIGLYRAGIVPVSYR 159

[Close]
BLAST of Lsi02G016250 vs. TAIR10
Match: AT3G55500.1 (AT3G55500.1 expansin A16)

HSP 1 Score: 248.4 bits (633), Expect = 6.3e-66
Identity = 115/158 (72.78%), Postives = 132/158 (83.54%), Query Frame = 1 

Query: 5   ISTIFLISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGN 64
           I+ + L++   L L++S    + A    V+  G WQ AHATFYGGNDASGTMGGACGYGN
Sbjct: 3   INPLILLTIFPLFLLLSF---TDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGN 62

Query: 65  LYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYAL 124
           LYSQGYG NTAALST+LFN G SCGACFEIKCVNDP+WCH GNPS+FVTATNFCPPN A 
Sbjct: 63  LYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQ 122

Query: 125 PNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           P+DNGGWCNPPR HFDL+MP+FLKIA+YRAGIVP+S+R
Sbjct: 123 PSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYR 157

[Close]
BLAST of Lsi02G016250 vs. TAIR10
Match: AT5G02260.1 (AT5G02260.1 expansin A9)

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-62
Identity = 107/147 (72.79%), Postives = 123/147 (83.67%), Query Frame = 1 

Query: 16  LLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTA 75
           + +++  A  + A   GVY  GPW NAHATFYG  DASGTMGGACGYGNLYSQGYGVNTA
Sbjct: 9   MAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTA 68

Query: 76  ALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPP 135
           ALSTALFN+G SCG+CFE+KC+NDP WC  GNPSI +TATNFCPPN+   +DNGGWCNPP
Sbjct: 69  ALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPP 128

Query: 136 RPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           R HFDL+MPMFL IA+Y+AGIVPVS+R
Sbjct: 129 REHFDLAMPMFLSIAKYKAGIVPVSYR 155

[Close]
BLAST of Lsi02G016250 vs. NCBI nr
Match: gi|659117935|ref|XP_008458865.1| (PREDICTED: expansin-A4 [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 5.7e-85
Identity = 151/162 (93.21%), Postives = 156/162 (96.30%), Query Frame = 1 

Query: 1   MAATISTIFLISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGAC 60
           MA TISTIFLI FSN LL +SL +E+RAL GG+YGAGPWQNAHATFYGGNDA+GTMGGAC
Sbjct: 1   MAPTISTIFLILFSNFLLTMSLPIENRALIGGLYGAGPWQNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 162

[Close]
BLAST of Lsi02G016250 vs. NCBI nr
Match: gi|700196146|gb|KGN51323.1| (hypothetical protein Csa_5G517210 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83
Identity = 149/162 (91.98%), Postives = 154/162 (95.06%), Query Frame = 1 

Query: 1   MAATISTIFLISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGAC 60
           M  TISTIFLISFSN LL +SL  E+RAL GG++GAGPW NAHATFYGGNDA+GTMGGAC
Sbjct: 1   MVPTISTIFLISFSNFLLTMSLPFENRALIGGLHGAGPWHNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 162

[Close]
BLAST of Lsi02G016250 vs. NCBI nr
Match: gi|525507290|ref|NP_001267685.1| (expansin-A16-like [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 131/143 (91.61%), Postives = 136/143 (95.10%), Query Frame = 1 

Query: 20  ISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALST 79
           +SL  E+RAL GG++GAGPW NAHATFYGGNDA+GTMGGACGYGNLYSQGY VNTAALST
Sbjct: 1   MSLPFENRALIGGLHGAGPWHNAHATFYGGNDAAGTMGGACGYGNLYSQGYAVNTAALST 60

Query: 80  ALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHF 139
           ALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND  GWCNPPRPHF
Sbjct: 61  ALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND--GWCNPPRPHF 120

Query: 140 DLSMPMFLKIAQYRAGIVPVSFR 163
           DLSMPMFLKIAQYRAGIVPVSFR
Sbjct: 121 DLSMPMFLKIAQYRAGIVPVSFR 141

[Close]
BLAST of Lsi02G016250 vs. NCBI nr
Match: gi|356539856|ref|XP_003538409.1| (PREDICTED: expansin-A6 [Glycine max])

HSP 1 Score: 273.5 bits (698), Expect = 5.2e-70
Identity = 124/151 (82.12%), Postives = 138/151 (91.39%), Query Frame = 1 

Query: 15  NLLLIISLA---VESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQGYG 74
           N++ I+SL    + S+A   GVY  GPWQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG
Sbjct: 5   NIIAIVSLLLLMIPSQAKIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYG 64

Query: 75  VNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGW 134
           VNTAALSTALFN+G+SCGACFEIKC +DP+WCH GNPSIFVTATNFCPPNYALP+DNGGW
Sbjct: 65  VNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTATNFCPPNYALPSDNGGW 124

Query: 135 CNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           CNPPRPHFDL+MPMFLKIAQYRAGIVPVS+R
Sbjct: 125 CNPPRPHFDLAMPMFLKIAQYRAGIVPVSYR 155

[Close]
BLAST of Lsi02G016250 vs. NCBI nr
Match: gi|734365988|gb|KHN17924.1| (Expansin-A3 [Glycine soja])

HSP 1 Score: 273.1 bits (697), Expect = 6.8e-70
Identity = 125/153 (81.70%), Postives = 140/153 (91.50%), Query Frame = 1 

Query: 10  LISFSNLLLIISLAVESRALTGGVYGAGPWQNAHATFYGGNDASGTMGGACGYGNLYSQG 69
           +I+  +LLL+I   + S+A   GVY  GPWQ+AHATFYGG+DASGTMGGACGYGNLYSQG
Sbjct: 6   IIAIVSLLLLI---IPSQAKIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQG 65

Query: 70  YGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNG 129
           YGVNTAALSTALFN+G+SCGACFEIKC +DP+WCH GNPSIFVTATNFCPPNYALP+DNG
Sbjct: 66  YGVNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTATNFCPPNYALPSDNG 125

Query: 130 GWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFR 163
           GWCNPPRPHFDL+MPMFLKIAQYRAGIVPVS+R
Sbjct: 126 GWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYR 155

The following BLAST results are available for this feature:
BLAST of Lsi02G016250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXPA6_ARATH1.1e-6777.55Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2[more]
EXPA4_ARATH4.6e-6683.97Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1[more]
EXPA3_ARATH1.0e-6580.14Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1[more]
EXPA7_ORYSJ1.7e-6584.21Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1[more]
EXP16_ARATH1.1e-6472.78Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1[more]
BLAST of Lsi02G016250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNX4_CUCSA9.9e-8491.98Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517210 PE=4 SV=1[more]
Q8W5A9_CUCSA1.6e-7391.61Alpha-expansin 4 OS=Cucumis sativus PE=2 SV=1[more]
A0A0R0HKK8_SOYBN3.6e-7082.12Uncharacterized protein OS=Glycine max GN=GLYMA_11G219400 PE=4 SV=1[more]
A0A0B2QD56_GLYSO4.7e-7081.70Expansin-A3 OS=Glycine soja GN=glysoja_017975 PE=4 SV=1[more]
A0A0D2VS58_GOSRA8.1e-7084.93Uncharacterized protein OS=Gossypium raimondii GN=B456_011G266000 PE=4 SV=1[more]
BLAST of Lsi02G016250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28950.16.1e-6977.55 expansin A6[more]
AT2G39700.12.6e-6783.97 expansin A4[more]
AT2G37640.15.7e-6780.14 Barwin-like endoglucanases superfamily protein[more]
AT3G55500.16.3e-6672.78 expansin A16[more]
AT5G02260.11.1e-6272.79 expansin A9[more]
BLAST of Lsi02G016250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117935|ref|XP_008458865.1|5.7e-8593.21PREDICTED: expansin-A4 [Cucumis melo][more]
gi|700196146|gb|KGN51323.1|1.4e-8391.98hypothetical protein Csa_5G517210 [Cucumis sativus][more]
gi|525507290|ref|NP_001267685.1|2.3e-7391.61expansin-A16-like [Cucumis sativus][more]
gi|356539856|ref|XP_003538409.1|5.2e-7082.12PREDICTED: expansin-A6 [Glycine max][more]
gi|734365988|gb|KHN17924.1|6.8e-7081.70Expansin-A3 [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO:0005669transcription factor TFIID complex
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0009664plant-type cell wall organization
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
IPR007118Expan_Lol_pI
IPR007112Expansin/allergen_DPBB_dom
IPR006751TAFII55_prot_cons_reg
IPR002963Expansin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G016250.1Lsi02G016250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 146..159
score: 8.9E-38coord: 129..146
score: 8.9E-38coord: 69..83
score: 8.9E-38coord: 96..107
score: 8.9E-38coord: 110..120
score: 8.9
IPR006751TAFII55 protein, conserved regionPFAMPF04658TAFII55_Ncoord: 273..299
score: 1.
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 74..161
score: 1.3
IPR007112Expansin/pollen allergen, DPBB domainPROFILEPS50842EXPANSIN_EG45coord: 57..162
score: 27
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 78..96
score: 5.5E-29coord: 56..74
score: 5.5E-29coord: 38..53
score: 5.5E-29coord: 154..170
score: 5.5
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 33..162
score: 3.0
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 74..160
score: 3.1
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 38..162
score: 1.78
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 3..162
score: 1.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G016250Csa5G517200Cucumber (Chinese Long) v2culsiB347
Lsi02G016250CSPI05G17830Wild cucumber (PI 183967)cpilsiB351
Lsi02G016250Cucsa.010900Cucumber (Gy14) v1cgylsiB318
Lsi02G016250CmoCh04G002110Cucurbita moschata (Rifu)cmolsiB634
Lsi02G016250Cla004655Watermelon (97103) v1lsiwmB170
Lsi02G016250MELO3C021620Melon (DHL92) v3.5.1lsimeB162
Lsi02G016250ClCG09G019650Watermelon (Charleston Gray)lsiwcgB155
Lsi02G016250MELO3C023866.2Melon (DHL92) v3.6.1lsimedB178
Lsi02G016250MELO3C021619.2Melon (DHL92) v3.6.1lsimedB171
Lsi02G016250MELO3C003134.2Melon (DHL92) v3.6.1lsimedB241
Lsi02G016250Cla97C09G181110Watermelon (97103) v2lsiwmbB208
Lsi02G016250Cla97C04G074810Watermelon (97103) v2lsiwmbB182
Lsi02G016250Cla97C07G131710Watermelon (97103) v2lsiwmbB205
Lsi02G016250Bhi06G000521Wax gourdlsiwgoB207
Lsi02G016250Cp4.1LG01g23750Cucurbita pepo (Zucchini)cpelsiB336
Lsi02G016250CsGy4G014170Cucumber (Gy14) v2cgyblsiB253
Lsi02G016250CsGy5G007060Cucumber (Gy14) v2cgyblsiB322
Lsi02G016250CsGy5G017510Cucumber (Gy14) v2cgyblsiB318
Lsi02G016250Carg04492Silver-seed gourdcarlsiB623
Lsi02G016250CsaV3_4G025050Cucumber (Chinese Long) v3cuclsiB290
Lsi02G016250CsaV3_5G026750Cucumber (Chinese Long) v3cuclsiB370
Lsi02G016250CsaV3_5G008160Cucumber (Chinese Long) v3cuclsiB374
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi02G016250Lsi01G014310Bottle gourd (USVL1VR-Ls)lsilsiB067
Lsi02G016250Lsi04G008890Bottle gourd (USVL1VR-Ls)lsilsiB102
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G016250Silver-seed gourdcarlsiB232
Lsi02G016250Cucurbita maxima (Rimu)cmalsiB272
Lsi02G016250Cucurbita maxima (Rimu)cmalsiB651
Lsi02G016250Cucurbita moschata (Rifu)cmolsiB261
Lsi02G016250Cucurbita moschata (Rifu)cmolsiB640
Lsi02G016250Cucurbita pepo (Zucchini)cpelsiB141