Carg04492 (gene) Silver-seed gourd

Overview
NameCarg04492
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionExpansin
LocationCucurbita_argyrosperma_scaffold_032 : 674594 .. 675516 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCAACTGTTTCAACAGCATTGCTCTCTTTCTTGCTAATAATGTCGTTGGCCGTGGAATGCAGAGAACATAAGGGAGTTTACGGCGGCGGCCCTTGGCAGAGCGCCCACGCCACATTCTACGGCGGCAATGACGCCTCCGGCACTATGGGTATTCAAACTTCAATTTCTTTTTCAGTTAATTTAATTAATTTTTTTTAATCGTATTAATACTTTAGGTATGGTTGCAGGGGGGGCGTGTGGTTACGGCAACTTATACAGCCAGGGGTACGGCGTGAACACGGCAGCATTGAGCACAGCTCTGTTCAACGACGGGTCCAGCTGTGGAGCTTGTTTCGAAATCAAGTGCGTGAATGACCCACAATGGTGCCACGCTGGAAACCCCTCGATTTTCGTGACAGCCACCAACTTTTGTCCTCCCAATTATGCACTCCCTAATGACAACGGCGGGTGGTGCAATCCTCCTCGCCCTCACTTCGACCTGTCCATGCCCATGTTCCTCAAAATCGCCCAATACCGCGCCGGGATCGTCCCCGTCTCGTTTCGCAGGTAAGTATGGCCAAAACATAAATTTTATCGTCGTTTCAGTGACAAATTGTTGATGAGATTATGTATGTTAGATAAACACGACTCTCCACAATTATATGGTATGAATTTTTCATCGTTAAAGATGTATTTATGATTGCAGGGTGGGATGCAGGAGGGAGGGAGGGATAAGGTTTACGATGAATGGGTTCAAATATTTCAATCTGGTACTGATAACCAACGTGGCAGGCGCTGGGGACATTGTGAGTGTGCGCATCAAGGGGTCGAAGACAGGGTGGATGAGCATGACACGTAATTGGGGTCAAAACTGGCAGTCAAACGACGTCTTAGTGGGTCAATCACTGTCGTTTAGTGTTAAAGGCAGCGATGGAAGG

mRNA sequence

ATGGCGGCAACTGTTTCAACAGCATTGCTCTCTTTCTTGCTAATAATGTCGTTGGCCGTGGAATGCAGAGAACATAAGGGAGTTTACGGCGGCGGCCCTTGGCAGAGCGCCCACGCCACATTCTACGGCGGCAATGACGCCTCCGGCACTATGGGGGGGGCGTGTGGTTACGGCAACTTATACAGCCAGGGGTACGGCGTGAACACGGCAGCATTGAGCACAGCTCTGTTCAACGACGGGTCCAGCTGTGGAGCTTGTTTCGAAATCAAGTGCGTGAATGACCCACAATGGTGCCACGCTGGAAACCCCTCGATTTTCGTGACAGCCACCAACTTTTGTCCTCCCAATTATGCACTCCCTAATGACAACGGCGGGTGGTGCAATCCTCCTCGCCCTCACTTCGACCTGTCCATGCCCATGTTCCTCAAAATCGCCCAATACCGCGCCGGGATCGTCCCCGTCTCGTTTCGCAGGGTGGGATGCAGGAGGGAGGGAGGGATAAGGTTTACGATGAATGGGTTCAAATATTTCAATCTGGTACTGATAACCAACGTGGCAGGCGCTGGGGACATTGTGAGTGTGCGCATCAAGGGGTCGAAGACAGGGTGGATGAGCATGACACGTAATTGGGGTCAAAACTGGCAGTCAAACGACGTCTTAGTGGGTCAATCACTGTCGTTTAGTGTTAAAGGCAGCGATGGAAGG

Coding sequence (CDS)

ATGGCGGCAACTGTTTCAACAGCATTGCTCTCTTTCTTGCTAATAATGTCGTTGGCCGTGGAATGCAGAGAACATAAGGGAGTTTACGGCGGCGGCCCTTGGCAGAGCGCCCACGCCACATTCTACGGCGGCAATGACGCCTCCGGCACTATGGGGGGGGCGTGTGGTTACGGCAACTTATACAGCCAGGGGTACGGCGTGAACACGGCAGCATTGAGCACAGCTCTGTTCAACGACGGGTCCAGCTGTGGAGCTTGTTTCGAAATCAAGTGCGTGAATGACCCACAATGGTGCCACGCTGGAAACCCCTCGATTTTCGTGACAGCCACCAACTTTTGTCCTCCCAATTATGCACTCCCTAATGACAACGGCGGGTGGTGCAATCCTCCTCGCCCTCACTTCGACCTGTCCATGCCCATGTTCCTCAAAATCGCCCAATACCGCGCCGGGATCGTCCCCGTCTCGTTTCGCAGGGTGGGATGCAGGAGGGAGGGAGGGATAAGGTTTACGATGAATGGGTTCAAATATTTCAATCTGGTACTGATAACCAACGTGGCAGGCGCTGGGGACATTGTGAGTGTGCGCATCAAGGGGTCGAAGACAGGGTGGATGAGCATGACACGTAATTGGGGTCAAAACTGGCAGTCAAACGACGTCTTAGTGGGTCAATCACTGTCGTTTAGTGTTAAAGGCAGCGATGGAAGG

Protein sequence

MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR
Homology
[Close]
BLAST of Carg04492 vs. NCBI nr
Match: XP_022960594.1 (expansin-A4-like [Cucurbita moschata])

HSP 1 Score: 493.0 bits (1268), Expect = 5.5e-136
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLS SVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSLSVKGSDGR 235

[Close]
BLAST of Carg04492 vs. NCBI nr
Match: XP_023528847.1 (expansin-A4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.8 bits (1257), Expect = 1.0e-134
Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTALLSFLLIMSLAVECR+H GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALLSFLLIMSLAVECRQHNGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYGVNTAALSTALFNDGSSCGACF+IKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNDGSSCGACFQIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGC+REGG+RFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCKREGGMRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 235

[Close]
BLAST of Carg04492 vs. NCBI nr
Match: XP_022990131.1 (expansin-A4-like [Cucurbita maxima])

HSP 1 Score: 488.4 bits (1256), Expect = 1.3e-134
Identity = 230/235 (97.87%), Postives = 233/235 (99.15%), Query Frame = 0 

Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTAL+SFLLIMSLAVECREHKGVYGGGPW SAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALISFLLIMSLAVECREHKGVYGGGPWHSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           Y+QGYGVNTAALS ALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YTQGYGVNTAALSAALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGG+RFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGMRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 235

[Close]
BLAST of Carg04492 vs. NCBI nr
Match: XP_008458865.1 (PREDICTED: expansin-A4 [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 1.8e-118
Identity = 209/240 (87.08%), Postives = 218/240 (90.83%), Query Frame = 0 

Query: 1   MAATVSTALL----SFLLIMSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGAC 60
           MA T+ST  L    +FLL MSL +E R    G+YG GPWQ+AHATFYGGNDA+GTMGGAC
Sbjct: 1   MAPTISTIFLILFSNFLLTMSLPIENRALIGGLYGAGPWQNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFK 180
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFK
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFK 180

Query: 181 YFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           YFNLVLITNVAGAGDI SV IKGSKTGWMSMTRNWGQNWQSN VLVGQ+LSF VK SDGR
Sbjct: 181 YFNLVLITNVAGAGDIASVSIKGSKTGWMSMTRNWGQNWQSNTVLVGQTLSFRVKSSDGR 240

[Close]
BLAST of Carg04492 vs. NCBI nr
Match: KGN51323.1 (hypothetical protein Csa_5G517210 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 4.8e-116
Identity = 206/240 (85.83%), Postives = 214/240 (89.17%), Query Frame = 0 

Query: 1   MAATVSTALL----SFLLIMSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGAC 60
           M  T+ST  L    +FLL MSL  E R    G++G GPW +AHATFYGGNDA+GTMGGAC
Sbjct: 1   MVPTISTIFLISFSNFLLTMSLPFENRALIGGLHGAGPWHNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFK 180
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFK
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFK 180

Query: 181 YFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           YFNLVLITNV GAGDIVSV IKGSKTGWMSMTRNWGQNWQSN VLVGQSLSF VK SD R
Sbjct: 181 YFNLVLITNVGGAGDIVSVSIKGSKTGWMSMTRNWGQNWQSNTVLVGQSLSFRVKSSDNR 240

[Close]
BLAST of Carg04492 vs. TAIR10
Match: AT2G28950.1 (expansin A6)

HSP 1 Score: 380.6 bits (976), Expect = 7.2e-106
Identity = 173/227 (76.21%), Postives = 200/227 (88.11%), Query Frame = 0 

Query: 9   LLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVN 68
           L+  +L   LA+      GVY GG W++AHATFYGG+DASGTMGGACGYGNLYSQGYGVN
Sbjct: 6   LVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVN 65

Query: 69  TAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCN 128
           TAALSTALFN+G SCGACFE+KC +DP+WCH+G+PSIF+TATNFCPPN+A P+DNGGWCN
Sbjct: 66  TAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCN 125

Query: 129 PPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGA 188
           PPRPHFDL+MPMFLKIA+YRAGIVPVSFRRV CR+ GGIRFT+NGF+YFNLVL+TNVAGA
Sbjct: 126 PPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGA 185

Query: 189 GDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           G+IV + +KG+ T WM+M+RNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 186 GNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRR 232

[Close]
BLAST of Carg04492 vs. TAIR10
Match: AT2G39700.1 (expansin A4)

HSP 1 Score: 380.2 bits (975), Expect = 9.4e-106
Identity = 170/209 (81.34%), Postives = 190/209 (90.91%), Query Frame = 0 

Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           G+Y GG WQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G SCGAC
Sbjct: 24  GIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGAC 83

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FE+KC NDPQWCH+G+PSI +TATNFCPPN A P+DNGGWCNPPR HFDL+MP+FLKIAQ
Sbjct: 84  FELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQ 143

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NG +YFNLVLITNVAGAGDIV   +KGS+TGWMS+
Sbjct: 144 YRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSL 203

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VLVGQ+LSF V GSD R
Sbjct: 204 SRNWGQNWQSNAVLVGQALSFRVTGSDRR 232

[Close]
BLAST of Carg04492 vs. TAIR10
Match: AT3G55500.1 (expansin A16)

HSP 1 Score: 379.4 bits (973), Expect = 1.6e-105
Identity = 177/235 (75.32%), Postives = 195/235 (82.98%), Query Frame = 0 

Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MA      L  F L + L+        V+ GG WQ+AHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYG NTAALST+LFN G SCGACFEIKCVNDP+WCH GNPS+FVTATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           +DNGGWCNPPR HFDL+MP+FLKIA+YRAGIVP+S+RRV CR+ GGIRFT+NG +YFNLV
Sbjct: 121 SDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDI    +KGSKTGWMS+TRNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 181 LITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRR 235

[Close]
BLAST of Carg04492 vs. TAIR10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein)

HSP 1 Score: 371.3 bits (952), Expect = 4.4e-103
Identity = 169/209 (80.86%), Postives = 187/209 (89.47%), Query Frame = 0 

Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           GVY GGPWQ+AHATFYGG+DASGTMGGACGYGNLYSQGYGVNTAALSTALFN+G SCGAC
Sbjct: 29  GVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGAC 88

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FEIKC +DP+WC  GNPSI VTATNFCPPN+A P+D+GGWCNPPR HFDL+MPMFLKI  
Sbjct: 89  FEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGL 148

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NGF+YFNLVL+TNVAGAGDI  V +KGSKT W+ M
Sbjct: 149 YRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRM 208

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VL+GQSLSF V  SD R
Sbjct: 209 SRNWGQNWQSNAVLIGQSLSFRVTASDRR 237

[Close]
BLAST of Carg04492 vs. TAIR10
Match: AT5G02260.1 (expansin A9)

HSP 1 Score: 364.8 bits (935), Expect = 4.1e-101
Identity = 165/233 (70.82%), Postives = 197/233 (84.55%), Query Frame = 0 

Query: 5   VSTALLSFLLIMSLAVECREHK--GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYS 64
           ++  +++F+ +M +       K  GVY GGPW +AHATFYG  DASGTMGGACGYGNLYS
Sbjct: 1   MAAKVITFMAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYS 60

Query: 65  QGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND 124
           QGYGVNTAALSTALFN+G SCG+CFE+KC+NDP WC  GNPSI +TATNFCPPN+   +D
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASD 120

Query: 125 NGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLI 184
           NGGWCNPPR HFDL+MPMFL IA+Y+AGIVPVS+RR+ CR++GGIRFT+NGFKYFNLVL+
Sbjct: 121 NGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLV 180

Query: 185 TNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           TNVAGAGD++ V +KGS T W+ ++RNWGQNWQSN +LVGQSLSF VK SDGR
Sbjct: 181 TNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGR 233

[Close]
BLAST of Carg04492 vs. Swiss-Prot
Match: sp|Q852A1|EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.4e-105
Identity = 173/211 (81.99%), Postives = 190/211 (90.05%), Query Frame = 0 

Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           G YGGG WQSAHATFYGG+DASGTMGGACGYGNLYSQGYGVN AALSTALFN G SCGAC
Sbjct: 29  GAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGAC 88

Query: 87  FEIKCVNDP--QWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKI 146
           FEIKCVN P  +WCH G+PSI +TATNFCPPNYALP+DNGGWCNPPRPHFDL+MPMFL I
Sbjct: 89  FEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHI 148

Query: 147 AQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWM 206
           A+YRAGIVPVS+RRV CR++GG+RFT+NGF+YFNLVLITNVAGAGDIV   +KG+ TGWM
Sbjct: 149 AEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWM 208

Query: 207 SMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
            M+RNWGQNWQSN VLVGQ+LSF V GSD R
Sbjct: 209 PMSRNWGQNWQSNSVLVGQALSFRVTGSDRR 239

[Close]
BLAST of Carg04492 vs. Swiss-Prot
Match: sp|Q38865|EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-104
Identity = 173/227 (76.21%), Postives = 200/227 (88.11%), Query Frame = 0 

Query: 9   LLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVN 68
           L+  +L   LA+      GVY GG W++AHATFYGG+DASGTMGGACGYGNLYSQGYGVN
Sbjct: 6   LVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVN 65

Query: 69  TAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCN 128
           TAALSTALFN+G SCGACFE+KC +DP+WCH+G+PSIF+TATNFCPPN+A P+DNGGWCN
Sbjct: 66  TAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCN 125

Query: 129 PPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGA 188
           PPRPHFDL+MPMFLKIA+YRAGIVPVSFRRV CR+ GGIRFT+NGF+YFNLVL+TNVAGA
Sbjct: 126 PPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGA 185

Query: 189 GDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           G+IV + +KG+ T WM+M+RNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 186 GNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRR 232

[Close]
BLAST of Carg04492 vs. Swiss-Prot
Match: sp|O48818|EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-104
Identity = 170/209 (81.34%), Postives = 190/209 (90.91%), Query Frame = 0 

Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           G+Y GG WQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G SCGAC
Sbjct: 24  GIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGAC 83

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FE+KC NDPQWCH+G+PSI +TATNFCPPN A P+DNGGWCNPPR HFDL+MP+FLKIAQ
Sbjct: 84  FELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQ 143

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NG +YFNLVLITNVAGAGDIV   +KGS+TGWMS+
Sbjct: 144 YRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSL 203

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VLVGQ+LSF V GSD R
Sbjct: 204 SRNWGQNWQSNAVLVGQALSFRVTGSDRR 232

[Close]
BLAST of Carg04492 vs. Swiss-Prot
Match: sp|Q9M2S9|EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.9e-104
Identity = 177/235 (75.32%), Postives = 195/235 (82.98%), Query Frame = 0 

Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MA      L  F L + L+        V+ GG WQ+AHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYG NTAALST+LFN G SCGACFEIKCVNDP+WCH GNPS+FVTATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           +DNGGWCNPPR HFDL+MP+FLKIA+YRAGIVP+S+RRV CR+ GGIRFT+NG +YFNLV
Sbjct: 121 SDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDI    +KGSKTGWMS+TRNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 181 LITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRR 235

[Close]
BLAST of Carg04492 vs. Swiss-Prot
Match: sp|O80932|EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.8e-102
Identity = 169/209 (80.86%), Postives = 187/209 (89.47%), Query Frame = 0 

Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           GVY GGPWQ+AHATFYGG+DASGTMGGACGYGNLYSQGYGVNTAALSTALFN+G SCGAC
Sbjct: 29  GVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGAC 88

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FEIKC +DP+WC  GNPSI VTATNFCPPN+A P+D+GGWCNPPR HFDL+MPMFLKI  
Sbjct: 89  FEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGL 148

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NGF+YFNLVL+TNVAGAGDI  V +KGSKT W+ M
Sbjct: 149 YRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRM 208

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VL+GQSLSF V  SD R
Sbjct: 209 SRNWGQNWQSNAVLIGQSLSFRVTASDRR 237

[Close]
BLAST of Carg04492 vs. TrEMBL
Match: tr|A0A1S3C8Z5|A0A1S3C8Z5_CUCME (Expansin OS=Cucumis melo OX=3656 GN=LOC103498141 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.2e-118
Identity = 209/240 (87.08%), Postives = 218/240 (90.83%), Query Frame = 0 

Query: 1   MAATVSTALL----SFLLIMSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGAC 60
           MA T+ST  L    +FLL MSL +E R    G+YG GPWQ+AHATFYGGNDA+GTMGGAC
Sbjct: 1   MAPTISTIFLILFSNFLLTMSLPIENRALIGGLYGAGPWQNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFK 180
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFK
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFK 180

Query: 181 YFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           YFNLVLITNVAGAGDI SV IKGSKTGWMSMTRNWGQNWQSN VLVGQ+LSF VK SDGR
Sbjct: 181 YFNLVLITNVAGAGDIASVSIKGSKTGWMSMTRNWGQNWQSNTVLVGQTLSFRVKSSDGR 240

[Close]
BLAST of Carg04492 vs. TrEMBL
Match: tr|A0A0A0KNX4|A0A0A0KNX4_CUCSA (Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G517210 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.2e-116
Identity = 206/240 (85.83%), Postives = 214/240 (89.17%), Query Frame = 0 

Query: 1   MAATVSTALL----SFLLIMSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGAC 60
           M  T+ST  L    +FLL MSL  E R    G++G GPW +AHATFYGGNDA+GTMGGAC
Sbjct: 1   MVPTISTIFLISFSNFLLTMSLPFENRALIGGLHGAGPWHNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFK 180
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFK
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFK 180

Query: 181 YFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           YFNLVLITNV GAGDIVSV IKGSKTGWMSMTRNWGQNWQSN VLVGQSLSF VK SD R
Sbjct: 181 YFNLVLITNVGGAGDIVSVSIKGSKTGWMSMTRNWGQNWQSNTVLVGQSLSFRVKSSDNR 240

[Close]
BLAST of Carg04492 vs. TrEMBL
Match: tr|A0A218WC23|A0A218WC23_PUNGR (Expansin OS=Punica granatum OX=22663 GN=CDL15_Pgr025898 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 5.3e-111
Identity = 193/239 (80.75%), Postives = 213/239 (89.12%), Query Frame = 0 

Query: 1   MAATVSTALLSFLLIMS----LAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACG 60
           MAA VS   ++ ++++S    LAV      GVY GGPWQSAHATFYGGNDA+GTMGGACG
Sbjct: 1   MAAVVSVLSVARVVLVSLVAFLAVAEARIPGVYAGGPWQSAHATFYGGNDAAGTMGGACG 60

Query: 61  YGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPN 120
           YGNLYSQGYGVNTAALSTALFN+G SCGACFEIKC N+PQWCHAG+PSIF+TATNFCPPN
Sbjct: 61  YGNLYSQGYGVNTAALSTALFNNGYSCGACFEIKCANEPQWCHAGSPSIFITATNFCPPN 120

Query: 121 YALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKY 180
           YALPNDNGGWCNPPRPHFDL+MPMFLKIA+YRAGIVPV++RRV CR+ GGIRFT+NGFKY
Sbjct: 121 YALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKHGGIRFTINGFKY 180

Query: 181 FNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           FNLVLITNVAGAGDIV V +KGSKTGWMS++RNWGQNWQSN VLVGQSLSF V GSD R
Sbjct: 181 FNLVLITNVAGAGDIVKVSMKGSKTGWMSLSRNWGQNWQSNAVLVGQSLSFRVTGSDRR 239

[Close]
BLAST of Carg04492 vs. TrEMBL
Match: tr|Q8W5A9|Q8W5A9_CUCSA (Expansin OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.0e-110
Identity = 190/209 (90.91%), Postives = 196/209 (93.78%), Query Frame = 0 

Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           G++G GPW +AHATFYGGNDA+GTMGGACGYGNLYSQGY VNTAALSTALFNDG SCGAC
Sbjct: 13  GLHGAGPWHNAHATFYGGNDAAGTMGGACGYGNLYSQGYAVNTAALSTALFNDGYSCGAC 72

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND  GWCNPPRPHFDLSMPMFLKIAQ
Sbjct: 73  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND--GWCNPPRPHFDLSMPMFLKIAQ 132

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVSFRRV CRREGG+RFT+NGFKYFNLVLITNV GAGDIVSV IKGSKTGWMSM
Sbjct: 133 YRAGIVPVSFRRVACRREGGMRFTINGFKYFNLVLITNVGGAGDIVSVSIKGSKTGWMSM 192

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           TRNWGQNWQSN VLVGQSLSF VK SD R
Sbjct: 193 TRNWGQNWQSNTVLVGQSLSFRVKSSDNR 219

[Close]
BLAST of Carg04492 vs. TrEMBL
Match: tr|A0A1U8A530|A0A1U8A530_NELNU (Expansin OS=Nelumbo nucifera OX=4432 GN=LOC104597175 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 7.6e-110
Identity = 188/235 (80.00%), Postives = 207/235 (88.09%), Query Frame = 0 

Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MA      + + LLI  L +      GVY GGPWQSAHATFYGG+DASGTMGGACGYGNL
Sbjct: 1   MATATVNVVSAVLLISFLTLVDARIPGVYTGGPWQSAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYGVNTAALSTALFN G SCGACFEIKC NDPQWCH+G+PSIF+TATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNAGLSCGACFEIKCANDPQWCHSGSPSIFITATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDL+MPMFLKIA+YRAGIVPV++RRV CR++GGIRFT+NGF+YFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIV V +KGS+TGWMSM+RNWGQNWQSN VLVGQSLSF + GSD R
Sbjct: 181 LITNVAGAGDIVKVSVKGSQTGWMSMSRNWGQNWQSNAVLVGQSLSFRITGSDRR 235

The following BLAST results are available for this feature:
BLAST of Carg04492 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960594.15.5e-13699.57expansin-A4-like [Cucurbita moschata][more]
XP_023528847.11.0e-13497.87expansin-A4-like [Cucurbita pepo subsp. pepo][more]
XP_022990131.11.3e-13497.87expansin-A4-like [Cucurbita maxima][more]
XP_008458865.11.8e-11887.08PREDICTED: expansin-A4 [Cucumis melo][more]
KGN51323.14.8e-11685.83hypothetical protein Csa_5G517210 [Cucumis sativus][more]
BLAST of Carg04492 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28950.17.2e-10676.21expansin A6[more]
AT2G39700.19.4e-10681.34expansin A4[more]
AT3G55500.11.6e-10575.32expansin A16[more]
AT2G37640.14.4e-10380.86Barwin-like endoglucanases superfamily protein[more]
AT5G02260.14.1e-10170.82expansin A9[more]
BLAST of Carg04492 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q852A1|EXPA7_ORYSJ3.4e-10581.99Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1[more]
sp|Q38865|EXPA6_ARATH1.3e-10476.21Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2[more]
sp|O48818|EXPA4_ARATH1.7e-10481.34Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1[more]
sp|Q9M2S9|EXP16_ARATH2.9e-10475.32Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1[more]
sp|O80932|EXPA3_ARATH7.8e-10280.86Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1[more]
BLAST of Carg04492 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C8Z5|A0A1S3C8Z5_CUCME1.2e-11887.08Expansin OS=Cucumis melo OX=3656 GN=LOC103498141 PE=3 SV=1[more]
tr|A0A0A0KNX4|A0A0A0KNX4_CUCSA3.2e-11685.83Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G517210 PE=3 SV=1[more]
tr|A0A218WC23|A0A218WC23_PUNGR5.3e-11180.75Expansin OS=Punica granatum OX=22663 GN=CDL15_Pgr025898 PE=3 SV=1[more]
tr|Q8W5A9|Q8W5A9_CUCSA2.0e-11090.91Expansin OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
tr|A0A1U8A530|A0A1U8A530_NELNU7.6e-11080.00Expansin OS=Nelumbo nucifera OX=4432 GN=LOC104597175 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009664plant-type cell wall organization
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR036749Expansin_CBD_sf
IPR036908RlpA-like_sf
IPR007117Expansin_CBD
IPR009009RlpA-like_DPBB
IPR007112Expansin/allergen_DPBB_dom
IPR002963Expansin
IPR007118Expan_Lol_pI
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04492-RACarg04492-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 203..217
score: 66.67
coord: 51..69
score: 76.97
coord: 73..91
score: 70.92
coord: 149..165
score: 62.06
coord: 33..48
score: 65.94
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 165..177
score: 75.64
coord: 212..233
score: 69.39
coord: 141..154
score: 80.0
coord: 124..141
score: 77.78
coord: 177..198
score: 73.64
coord: 91..102
score: 49.72
coord: 105..115
score: 85.15
coord: 64..78
score: 90.0
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 69..156
e-value: 6.1E-59
score: 211.8
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 52..166
score: 30.81
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 69..155
e-value: 1.4E-22
score: 79.6
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 167..234
e-value: 3.6E-21
score: 74.9
IPR007117Expansin, cellulose-binding-like domainPROSITEPS50843EXPANSIN_CBDcoord: 176..235
score: 15.122
IPR036908RlpA-like domain superfamilyGENE3DG3DSA:2.40.40.10coord: 19..162
e-value: 4.5E-45
score: 155.1
IPR036908RlpA-like domain superfamilySUPERFAMILYSSF50685Barwin-like endoglucanasescoord: 33..184
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3DG3DSA:2.60.40.760coord: 166..235
e-value: 1.2E-13
score: 52.7
IPR036749Expansin, cellulose-binding-like domain superfamilySUPERFAMILYSSF49590PHL pollen allergencoord: 163..235
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 6..235
NoneNo IPR availablePANTHERPTHR31867:SF75EXPANSIN-A3coord: 6..235