Cp4.1LG01g10840 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g10840
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionExpansin
LocationCp4.1LG01 : 6418949 .. 6420450 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTACCTTCTTCCTTCATACTCCTTTGTCTTTAATCTACCGCATTGAATTGTTGATTCGAATTTCTGATTGGAAGCAAAATCTTCTCATATCTCTTCACTGGAATTTTATCGAGAAACCTAGCTAGTTCTGAATCTGCGAATGATCGCTGGTTAATCGAGAATTGTGTGTGTTTGATTTTTTCAATCGGACTTTGTCTGAGATACCTAGATGTGAAGAATGATCGTTTGAATTGAATTGATTACGAGAGTATTTGTGTATTTGATTCAAATCTTGCGATTGCCTAATTATGAACAAACGGTTGAATTGATGTGAGAAAGAATTGTGTGCTCGATTGATTGATTCAGGAGGTGCTTGCGGTTATGGAAACTTGTTCGACGATGGCTACGGTGTGAACACGGCGGCGCTGAGCACTGCTCTGTTCAACAACGGTTTGAGCTGCGGAGCTTGTTTCGAGATTAAGTGCGTTGACGATCCACAGTGGTGCCATCCCGGGAATCCGTCAATTATCATAACGGCCACGAACTTTTGCCCTCCGAACTTCGCGATTCCGAGCGACAATGGAGGGTGGTGCAACCCTCCCCGTCCTCATTTCGACCTCTCCATGCCTATGTTCCTCAAGCTCGCCCAGTACAAAGCCGGAATTATTCCCGTCACTTATCGCAGGTCAAAACAAAAACGCCCTTTTCTTTCCTCTTGGGATATATTACTAATTTACTATCAATCCAGAGTTTAATTAGACCTAAACAAATGAAAATTTCATGAATTATGTTAGTTTATTAGTTTTGAAAAACTAGATTGAGCTAAATCAAGCTAAATTAATCTTAAAATATATAGTTTCACTGTACCCAAGGGGCAATGGGTCAATGACAACGTAGCTCAATTATAGGAAAGAAAATTAGAAATGGTATTAGCTTGGGAACTTCTATTAGTACGTTTGAATTTATAAATATGTAGTGTTTGTGAGCACTGAAACATTGATTTTGTGGGTGGACAGGGTGGGTTGCGTGAAAAAAGGAGGAATAAGATTCAGTATGAACGGCTTCCAGTACTTCAACTTGGTGCTCATCTCAAACGTGGGAGGCGCAGGGGACGTGGTGGAGGTGAGCGTGAAAGGCAGCAGCAACACCAAATGGATGAGCATGAGACGCAACTGGGGCCAGAACTGGCAACCCGACACCGTCTTGGTTGGTCAGTCGCTGTCCTTCAGAGTCACAACCAGCGACCGTCGCACCGTCACGTCCTGGAACGTCGTCCCCTCTAACTGGCAGTTTGGGCAGACGTTCTCCGGTGACAATTTCAGCGTCTAATTTTGAGAATGGAATTTGATTCTTTTCATTCAAATATGGGGGAATAGGGTTGTGTTAGTGAGCGTAGTTTTGGGAGGGAAGTTTTTGTTTTGGGAAGATGGAAATGATACCAAGTGATACTGTAGGAAGAATAAAAGAGTTGGGTATTTTTTATGAAAGAAGAGGAAGGCATGGACTCGGTCTATTTTAA

mRNA sequence

ATGGGAGGTGCTTGCGGTTATGGAAACTTGTTCGACGATGGCTACGGTGTGAACACGGCGGCGCTGAGCACTGCTCTGTTCAACAACGGTTTGAGCTGCGGAGCTTGTTTCGAGATTAAGTGCGTTGACGATCCACAGTGGTGCCATCCCGGGAATCCGTCAATTATCATAACGGCCACGAACTTTTGCCCTCCGAACTTCGCGATTCCGAGCGACAATGGAGGGTGGTGCAACCCTCCCCGTCCTCATTTCGACCTCTCCATGCCTATGTTCCTCAAGCTCGCCCAGTACAAAGCCGGAATTATTCCCGTCACTTATCGCAGAAGAGGAAGGCATGGACTCGGTCTATTTTAA

Coding sequence (CDS)

ATGGGAGGTGCTTGCGGTTATGGAAACTTGTTCGACGATGGCTACGGTGTGAACACGGCGGCGCTGAGCACTGCTCTGTTCAACAACGGTTTGAGCTGCGGAGCTTGTTTCGAGATTAAGTGCGTTGACGATCCACAGTGGTGCCATCCCGGGAATCCGTCAATTATCATAACGGCCACGAACTTTTGCCCTCCGAACTTCGCGATTCCGAGCGACAATGGAGGGTGGTGCAACCCTCCCCGTCCTCATTTCGACCTCTCCATGCCTATGTTCCTCAAGCTCGCCCAGTACAAAGCCGGAATTATTCCCGTCACTTATCGCAGAAGAGGAAGGCATGGACTCGGTCTATTTTAA

Protein sequence

MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITATNFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRRRGRHGLGLF
Homology
[Close]
BLAST of Cp4.1LG01g10840 vs. Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 1.0e-54
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFE+KC  DP+WCH G+PSI ITAT
Sbjct: 48  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITAT 107

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPNFA PSDNGGWCNPPRPHFDL+MPMFLK+A+Y+AGI+PV++RR
Sbjct: 108 NFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRR 155

[Close]
BLAST of Cp4.1LG01g10840 vs. Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.1e-54
Identity = 89/108 (82.41%), Postives = 99/108 (91.67%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFEIKC DDP+WC PGNPSI++TAT
Sbjct: 53  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTAT 112

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPNFA PSD+GGWCNPPR HFDL+MPMFLK+  Y+AGI+PV+YRR
Sbjct: 113 NFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRR 160

[Close]
BLAST of Cp4.1LG01g10840 vs. Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.1e-54
Identity = 88/108 (81.48%), Postives = 100/108 (92.59%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYG NTAALSTALFNNG+SCGACFE+KC +DPQWCH G+PSI+ITAT
Sbjct: 48  MGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITAT 107

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN A PSDNGGWCNPPR HFDL+MP+FLK+AQY+AGI+PV+YRR
Sbjct: 108 NFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRR 155

[Close]
BLAST of Cp4.1LG01g10840 vs. Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-53
Identity = 85/108 (78.70%), Postives = 100/108 (92.59%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYG NTAALST+LFN+G SCGACFEIKCV+DP+WCHPGNPS+ +TAT
Sbjct: 51  MGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTAT 110

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN A PSDNGGWCNPPR HFDL+MP+FLK+A+Y+AGI+P++YRR
Sbjct: 111 NFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRR 158

[Close]
BLAST of Cp4.1LG01g10840 vs. Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.3e-53
Identity = 88/110 (80.00%), Postives = 102/110 (92.73%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDP--QWCHPGNPSIIIT 60
           MGGACGYGNL+  GYGVN AALSTALFN+G SCGACFEIKCV+ P  +WCHPG+PSI+IT
Sbjct: 53  MGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILIT 112

Query: 61  ATNFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           ATNFCPPN+A+PSDNGGWCNPPRPHFDL+MPMFL +A+Y+AGI+PV+YRR
Sbjct: 113 ATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRR 162

[Close]
BLAST of Cp4.1LG01g10840 vs. TrEMBL
Match: A0A118K2U1_CYNCS (Barwin-like endoglucanase OS=Cynara cardunculus var. scolymus GN=Ccrd_016763 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-56
Identity = 95/109 (87.16%), Postives = 105/109 (96.33%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNGLSCGACFE+KC+DDPQWCHPGNPSI+ITAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCIDDPQWCHPGNPSILITAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRRR 110
           NFCPPNFA PSDNGGWCNPPRPHFDL+MPMFLK+A Y+AGI+PV+YRR+
Sbjct: 109 NFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAAYRAGIVPVSYRRQ 157

[Close]
BLAST of Cp4.1LG01g10840 vs. TrEMBL
Match: A0A0R0HKK8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G219400 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.0e-56
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFEIKC DDP+WCHPGNPSI +TAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN+A+PSDNGGWCNPPRPHFDL+MPMFLK+AQY+AGI+PV+YRR
Sbjct: 109 NFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYRR 156

[Close]
BLAST of Cp4.1LG01g10840 vs. TrEMBL
Match: A0A0B2QD56_GLYSO (Expansin-A3 OS=Glycine soja GN=glysoja_017975 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.0e-56
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFEIKC DDP+WCHPGNPSI +TAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN+A+PSDNGGWCNPPRPHFDL+MPMFLK+AQY+AGI+PV+YRR
Sbjct: 109 NFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYRR 156

[Close]
BLAST of Cp4.1LG01g10840 vs. TrEMBL
Match: A0A0D2VXS5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G104400 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 8.5e-56
Identity = 93/108 (86.11%), Postives = 104/108 (96.30%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNGLSCGACFEIKC DDP+WCHPGNPSI ITAT
Sbjct: 55  MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCTDDPRWCHPGNPSIFITAT 114

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN+A+PSDNGGWCNPPRPHFDL+MPMFLK+A+Y+AGI+PV++RR
Sbjct: 115 NFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKMAEYRAGIVPVSFRR 162

[Close]
BLAST of Cp4.1LG01g10840 vs. TrEMBL
Match: B7TYQ2_9GENT (Expansin OS=Breonia chinensis GN=EXP1 PE=2 SV=2)

HSP 1 Score: 223.4 bits (568), Expect = 1.4e-55
Identity = 92/108 (85.19%), Postives = 104/108 (96.30%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNGLSCGACFE+KC DDPQWCHPG+PSI ITAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCADDPQWCHPGSPSIFITAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN+A+P+DNGGWCNPPRPHFDL+MPMFLK+A+Y+AGI+PV+YRR
Sbjct: 109 NFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRR 156

[Close]
BLAST of Cp4.1LG01g10840 vs. TAIR10
Match: AT2G28950.1 (AT2G28950.1 expansin A6)

HSP 1 Score: 213.8 bits (543), Expect = 5.8e-56
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFE+KC  DP+WCH G+PSI ITAT
Sbjct: 48  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITAT 107

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPNFA PSDNGGWCNPPRPHFDL+MPMFLK+A+Y+AGI+PV++RR
Sbjct: 108 NFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRR 155

[Close]
BLAST of Cp4.1LG01g10840 vs. TAIR10
Match: AT2G39700.1 (AT2G39700.1 expansin A4)

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-55
Identity = 88/108 (81.48%), Postives = 100/108 (92.59%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYG NTAALSTALFNNG+SCGACFE+KC +DPQWCH G+PSI+ITAT
Sbjct: 48  MGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITAT 107

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN A PSDNGGWCNPPR HFDL+MP+FLK+AQY+AGI+PV+YRR
Sbjct: 108 NFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRR 155

[Close]
BLAST of Cp4.1LG01g10840 vs. TAIR10
Match: AT2G37640.1 (AT2G37640.1 Barwin-like endoglucanases superfamily protein)

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-55
Identity = 89/108 (82.41%), Postives = 99/108 (91.67%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFEIKC DDP+WC PGNPSI++TAT
Sbjct: 53  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTAT 112

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPNFA PSD+GGWCNPPR HFDL+MPMFLK+  Y+AGI+PV+YRR
Sbjct: 113 NFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRR 160

[Close]
BLAST of Cp4.1LG01g10840 vs. TAIR10
Match: AT3G55500.1 (AT3G55500.1 expansin A16)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-54
Identity = 85/108 (78.70%), Postives = 100/108 (92.59%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYG NTAALST+LFN+G SCGACFEIKCV+DP+WCHPGNPS+ +TAT
Sbjct: 51  MGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTAT 110

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN A PSDNGGWCNPPR HFDL+MP+FLK+A+Y+AGI+P++YRR
Sbjct: 111 NFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRR 158

[Close]
BLAST of Cp4.1LG01g10840 vs. TAIR10
Match: AT5G02260.1 (AT5G02260.1 expansin A9)

HSP 1 Score: 208.0 bits (528), Expect = 3.2e-54
Identity = 88/108 (81.48%), Postives = 99/108 (91.67%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNGLSCG+CFE+KC++DP WC PGNPSI+ITAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPNF   SDNGGWCNPPR HFDL+MPMFL +A+YKAGI+PV+YRR
Sbjct: 109 NFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRR 156

[Close]
BLAST of Cp4.1LG01g10840 vs. NCBI nr
Match: gi|976920167|gb|KVI04908.1| (Barwin-like endoglucanase [Cynara cardunculus var. scolymus])

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-56
Identity = 95/109 (87.16%), Postives = 105/109 (96.33%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNGLSCGACFE+KC+DDPQWCHPGNPSI+ITAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCIDDPQWCHPGNPSILITAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRRR 110
           NFCPPNFA PSDNGGWCNPPRPHFDL+MPMFLK+A Y+AGI+PV+YRR+
Sbjct: 109 NFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAAYRAGIVPVSYRRQ 157

[Close]
BLAST of Cp4.1LG01g10840 vs. NCBI nr
Match: gi|734365988|gb|KHN17924.1| (Expansin-A3 [Glycine soja])

HSP 1 Score: 224.9 bits (572), Expect = 7.1e-56
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFEIKC DDP+WCHPGNPSI +TAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN+A+PSDNGGWCNPPRPHFDL+MPMFLK+AQY+AGI+PV+YRR
Sbjct: 109 NFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYRR 156

[Close]
BLAST of Cp4.1LG01g10840 vs. NCBI nr
Match: gi|356539856|ref|XP_003538409.1| (PREDICTED: expansin-A6 [Glycine max])

HSP 1 Score: 224.9 bits (572), Expect = 7.1e-56
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNG SCGACFEIKC DDP+WCHPGNPSI +TAT
Sbjct: 49  MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPKWCHPGNPSIFVTAT 108

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN+A+PSDNGGWCNPPRPHFDL+MPMFLK+AQY+AGI+PV+YRR
Sbjct: 109 NFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYRR 156

[Close]
BLAST of Cp4.1LG01g10840 vs. NCBI nr
Match: gi|720026995|ref|XP_010264435.1| (PREDICTED: expansin-A4 [Nelumbo nucifera])

HSP 1 Score: 224.6 bits (571), Expect = 9.3e-56
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNGLSCGACFEIKC +DPQWCHPG PSI+ITAT
Sbjct: 51  MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPQWCHPGGPSILITAT 110

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPNFA+PSDNGGWCNPPRPHFDL+MPMFLK+A+Y+AGI+PV YRR
Sbjct: 111 NFCPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158

[Close]
BLAST of Cp4.1LG01g10840 vs. NCBI nr
Match: gi|823253342|ref|XP_012459294.1| (PREDICTED: expansin-A6-like [Gossypium raimondii])

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-55
Identity = 93/108 (86.11%), Postives = 104/108 (96.30%), Query Frame = 1 

Query: 1   MGGACGYGNLFDDGYGVNTAALSTALFNNGLSCGACFEIKCVDDPQWCHPGNPSIIITAT 60
           MGGACGYGNL+  GYGVNTAALSTALFNNGLSCGACFEIKC DDP+WCHPGNPSI ITAT
Sbjct: 55  MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCTDDPRWCHPGNPSIFITAT 114

Query: 61  NFCPPNFAIPSDNGGWCNPPRPHFDLSMPMFLKLAQYKAGIIPVTYRR 109
           NFCPPN+A+PSDNGGWCNPPRPHFDL+MPMFLK+A+Y+AGI+PV++RR
Sbjct: 115 NFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKMAEYRAGIVPVSFRR 162

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g10840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXPA6_ARATH1.0e-5482.41Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2[more]
EXPA3_ARATH5.1e-5482.41Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1[more]
EXPA4_ARATH5.1e-5481.48Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1[more]
EXP16_ARATH1.9e-5378.70Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1[more]
EXPA7_ORYSJ3.3e-5380.00Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1[more]
BLAST of Cp4.1LG01g10840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A118K2U1_CYNCS1.7e-5687.16Barwin-like endoglucanase OS=Cynara cardunculus var. scolymus GN=Ccrd_016763 PE=... [more]
A0A0R0HKK8_SOYBN5.0e-5686.11Uncharacterized protein OS=Glycine max GN=GLYMA_11G219400 PE=4 SV=1[more]
A0A0B2QD56_GLYSO5.0e-5686.11Expansin-A3 OS=Glycine soja GN=glysoja_017975 PE=4 SV=1[more]
A0A0D2VXS5_GOSRA8.5e-5686.11Uncharacterized protein OS=Gossypium raimondii GN=B456_012G104400 PE=4 SV=1[more]
B7TYQ2_9GENT1.4e-5585.19Expansin OS=Breonia chinensis GN=EXP1 PE=2 SV=2[more]
BLAST of Cp4.1LG01g10840 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28950.15.8e-5682.41 expansin A6[more]
AT2G39700.12.9e-5581.48 expansin A4[more]
AT2G37640.12.9e-5582.41 Barwin-like endoglucanases superfamily protein[more]
AT3G55500.11.1e-5478.70 expansin A16[more]
AT5G02260.13.2e-5481.48 expansin A9[more]
BLAST of Cp4.1LG01g10840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976920167|gb|KVI04908.1|2.4e-5687.16Barwin-like endoglucanase [Cynara cardunculus var. scolymus][more]
gi|734365988|gb|KHN17924.1|7.1e-5686.11Expansin-A3 [Glycine soja][more]
gi|356539856|ref|XP_003538409.1|7.1e-5686.11PREDICTED: expansin-A6 [Glycine max][more]
gi|720026995|ref|XP_010264435.1|9.3e-5687.04PREDICTED: expansin-A4 [Nelumbo nucifera][more]
gi|823253342|ref|XP_012459294.1|1.2e-5586.11PREDICTED: expansin-A6-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0009664plant-type cell wall organization
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
IPR007118Expan_Lol_pI
IPR007112Expansin/allergen_DPBB_dom
IPR002963Expansin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g10840.1Cp4.1LG01g10840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 14..28
score: 4.2E-39coord: 91..104
score: 4.2E-39coord: 55..65
score: 4.2E-39coord: 41..52
score: 4.2E-39coord: 74..91
score: 4.2
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 19..106
score: 7.0
IPR007112Expansin/pollen allergen, DPBB domainPROFILEPS50842EXPANSIN_EG45coord: 2..108
score: 27
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 1..19
score: 1.7E-22coord: 99..115
score: 1.7E-22coord: 23..41
score: 1.7
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 1..108
score: 9.3
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 19..106
score: 3.6
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 1..108
score: 3.49
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 1..108
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g10840MELO3C023866.2Melon (DHL92) v3.6.1cpemedB436
Cp4.1LG01g10840MELO3C025907.2Melon (DHL92) v3.6.1cpemedB450
Cp4.1LG01g10840CsaV3_5G026750Cucumber (Chinese Long) v3cpecucB0551
Cp4.1LG01g10840CsaV3_4G025050Cucumber (Chinese Long) v3cpecucB0510
Cp4.1LG01g10840CsaV3_5G008160Cucumber (Chinese Long) v3cpecucB0541
Cp4.1LG01g10840CsaV3_6G016770Cucumber (Chinese Long) v3cpecucB0565
Cp4.1LG01g10840CsaV3_1G034310Cucumber (Chinese Long) v3cpecucB0477
Cp4.1LG01g10840Bhi06G000853Wax gourdcpewgoB0504
Cp4.1LG01g10840Bhi08G000514Wax gourdcpewgoB0548
Cp4.1LG01g10840Bhi10G000574Wax gourdcpewgoB0542
Cp4.1LG01g10840CsGy4G014170Cucumber (Gy14) v2cgybcpeB519
Cp4.1LG01g10840CsGy5G007060Cucumber (Gy14) v2cgybcpeB646
Cp4.1LG01g10840CsGy6G014250Cucumber (Gy14) v2cgybcpeB796
Cp4.1LG01g10840Carg04492Silver-seed gourdcarcpeB0964
Cp4.1LG01g10840Carg00261Silver-seed gourdcarcpeB0938
Cp4.1LG01g10840Carg12375Silver-seed gourdcarcpeB0619
Cp4.1LG01g10840Carg18323Silver-seed gourdcarcpeB0131
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g10840Cp4.1LG01g04870Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g10840Cp4.1LG20g08380Cucurbita pepo (Zucchini)cpecpeB388
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g10840Cucurbita pepo (Zucchini)cpecpeB071
Cp4.1LG01g10840Cucurbita pepo (Zucchini)cpecpeB402
Cp4.1LG01g10840Cucurbita pepo (Zucchini)cpecpeB408
Cp4.1LG01g10840Cucumber (Gy14) v1cgycpeB0458
Cp4.1LG01g10840Cucurbita maxima (Rimu)cmacpeB314
Cp4.1LG01g10840Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g10840Cucurbita maxima (Rimu)cmacpeB722
Cp4.1LG01g10840Cucurbita moschata (Rifu)cmocpeB277
Cp4.1LG01g10840Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g10840Cucurbita moschata (Rifu)cmocpeB674
Cp4.1LG01g10840Wild cucumber (PI 183967)cpecpiB437
Cp4.1LG01g10840Wild cucumber (PI 183967)cpecpiB450
Cp4.1LG01g10840Cucumber (Chinese Long) v2cpecuB437
Cp4.1LG01g10840Bottle gourd (USVL1VR-Ls)cpelsiB358
Cp4.1LG01g10840Watermelon (Charleston Gray)cpewcgB409
Cp4.1LG01g10840Watermelon (97103) v1cpewmB404
Cp4.1LG01g10840Melon (DHL92) v3.5.1cpemeB376
Cp4.1LG01g10840Melon (DHL92) v3.5.1cpemeB407
Cp4.1LG01g10840Cucumber (Gy14) v2cgybcpeB363
Cp4.1LG01g10840Melon (DHL92) v3.6.1cpemedB475
Cp4.1LG01g10840Silver-seed gourdcarcpeB0372
Cp4.1LG01g10840Cucumber (Chinese Long) v3cpecucB0486
Cp4.1LG01g10840Wax gourdcpewgoB0488
Cp4.1LG01g10840Wax gourdcpewgoB0545