Lsi02G009440 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATTCCCTCATTCGCCGCCGTCTTCTTCTCCCTCACCCTCATTCTCCTCGCCGGAATCTCAAATGCCAGAGACCTACGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCCGGCGCTATGGAAAATTCCTCTCCGCAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGACGTCGCTCTTCCCAAGGCGATGAACACTAGCCTCCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCAGCGGAGATCACATTCGTGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATAGCTAACAAGTGA ATGGCCATTCCCTCATTCGCCGCCGTCTTCTTCTCCCTCACCCTCATTCTCCTCGCCGGAATCTCAAATGCCAGAGACCTACGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCCGGCGCTATGGAAAATTCCTCTCCGCAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGACGTCGCTCTTCCCAAGGCGATGAACACTAGCCTCCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCAGCGGAGATCACATTCGTGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATAGCTAACAAGTGA ATGGCCATTCCCTCATTCGCCGCCGTCTTCTTCTCCCTCACCCTCATTCTCCTCGCCGGAATCTCAAATGCCAGAGACCTACGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCCGGCGCTATGGAAAATTCCTCTCCGCAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGACGTCGCTCTTCCCAAGGCGATGAACACTAGCCTCCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCAGCGGAGATCACATTCGTGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATAGCTAACAAGTGA MAIPSFAAVFFSLTLILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGSGDHIRGALLVASLVCGIIGVSLLIASAFIYFFKFRKQSKSSSSLSVSETTNIIANK
BLAST of Lsi02G009440 vs. TrEMBL
Match: A0A0A0LVV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538210 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 5.9e-54 Identity = 119/149 (79.87%), Postives = 132/149 (88.59%), Query Frame = 1
BLAST of Lsi02G009440 vs. TrEMBL
Match: W9RI93_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026007 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.5e-20 Identity = 69/150 (46.00%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of Lsi02G009440 vs. TrEMBL
Match: A9PI37_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.4e-18 Identity = 67/149 (44.97%), Postives = 91/149 (61.07%), Query Frame = 1
BLAST of Lsi02G009440 vs. TrEMBL
Match: I1L0E9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G024200 PE=4 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 6.9e-18 Identity = 62/129 (48.06%), Postives = 81/129 (62.79%), Query Frame = 1
BLAST of Lsi02G009440 vs. TrEMBL
Match: B9GG13_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38070g PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 6.9e-18 Identity = 66/149 (44.30%), Postives = 90/149 (60.40%), Query Frame = 1
BLAST of Lsi02G009440 vs. TAIR10
Match: AT4G21740.1 (AT4G21740.1 unknown protein) HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 1
BLAST of Lsi02G009440 vs. TAIR10
Match: AT1G30515.1 (AT1G30515.1 unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 9.5e-11 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 1
BLAST of Lsi02G009440 vs. NCBI nr
Match: gi|659068595|ref|XP_008445240.1| (PREDICTED: uncharacterized protein LOC103488324 [Cucumis melo]) HSP 1 Score: 235.3 bits (599), Expect = 6.7e-59 Identity = 128/153 (83.66%), Postives = 138/153 (90.20%), Query Frame = 1
BLAST of Lsi02G009440 vs. NCBI nr
Match: gi|778661965|ref|XP_011659106.1| (PREDICTED: uncharacterized protein LOC105436136 [Cucumis sativus]) HSP 1 Score: 218.4 bits (555), Expect = 8.5e-54 Identity = 119/149 (79.87%), Postives = 132/149 (88.59%), Query Frame = 1
BLAST of Lsi02G009440 vs. NCBI nr
Match: gi|703106697|ref|XP_010098565.1| (hypothetical protein L484_026007 [Morus notabilis]) HSP 1 Score: 106.7 bits (265), Expect = 3.6e-20 Identity = 69/150 (46.00%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of Lsi02G009440 vs. NCBI nr
Match: gi|118488451|gb|ABK96040.1| (unknown [Populus trichocarpa]) HSP 1 Score: 100.1 bits (248), Expect = 3.4e-18 Identity = 67/149 (44.97%), Postives = 91/149 (61.07%), Query Frame = 1
BLAST of Lsi02G009440 vs. NCBI nr
Match: gi|571476015|ref|XP_006586836.1| (PREDICTED: uncharacterized protein LOC100791407 [Glycine max]) HSP 1 Score: 98.6 bits (244), Expect = 9.9e-18 Identity = 62/129 (48.06%), Postives = 81/129 (62.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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