ClCG03G006250 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCGCCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCTCCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACCCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGAGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAGAGCAGATCCTTGTCTTCGCTCTCTGTCTCTGAAACTACTAACATTATACCTAACAAGTGA ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCGCCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCTCCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACCCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGAGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAGAGCAGATCCTTGTCTTCGCTCTCTGTCTCTGAAACTACTAACATTATACCTAACAAGTGA ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCGCCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCTCCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACCCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGAGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAGAGCAGATCCTTGTCTTCGCTCTCTGTCTCTGAAACTACTAACATTATACCTAACAAGTGA MAIPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAFIYFFKFRKQSKSRSLSSLSVSETTNIIPNK
BLAST of ClCG03G006250 vs. TrEMBL
Match: A0A0A0LVV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538210 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.8e-56 Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 1
BLAST of ClCG03G006250 vs. TrEMBL
Match: W9RI93_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026007 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 3.4e-25 Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = 1
BLAST of ClCG03G006250 vs. TrEMBL
Match: A9PI37_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-21 Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of ClCG03G006250 vs. TrEMBL
Match: B9GG13_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38070g PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 8.8e-21 Identity = 64/150 (42.67%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of ClCG03G006250 vs. TrEMBL
Match: A9PEI6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 8.8e-21 Identity = 64/150 (42.67%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of ClCG03G006250 vs. TAIR10
Match: AT4G21740.1 (AT4G21740.1 unknown protein) HSP 1 Score: 73.9 bits (180), Expect = 9.3e-14 Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = 1
BLAST of ClCG03G006250 vs. TAIR10
Match: AT1G30515.1 (AT1G30515.1 unknown protein) HSP 1 Score: 68.9 bits (167), Expect = 3.0e-12 Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1
BLAST of ClCG03G006250 vs. NCBI nr
Match: gi|659068595|ref|XP_008445240.1| (PREDICTED: uncharacterized protein LOC103488324 [Cucumis melo]) HSP 1 Score: 246.1 bits (627), Expect = 3.9e-62 Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 1
BLAST of ClCG03G006250 vs. NCBI nr
Match: gi|778661965|ref|XP_011659106.1| (PREDICTED: uncharacterized protein LOC105436136 [Cucumis sativus]) HSP 1 Score: 225.7 bits (574), Expect = 5.4e-56 Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 1
BLAST of ClCG03G006250 vs. NCBI nr
Match: gi|703106697|ref|XP_010098565.1| (hypothetical protein L484_026007 [Morus notabilis]) HSP 1 Score: 122.9 bits (307), Expect = 4.9e-25 Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = 1
BLAST of ClCG03G006250 vs. NCBI nr
Match: gi|118488451|gb|ABK96040.1| (unknown [Populus trichocarpa]) HSP 1 Score: 109.8 bits (273), Expect = 4.3e-21 Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of ClCG03G006250 vs. NCBI nr
Match: gi|566153405|ref|XP_002298888.2| (hypothetical protein POPTR_0001s38070g [Populus trichocarpa]) HSP 1 Score: 108.2 bits (269), Expect = 1.3e-20 Identity = 64/150 (42.67%), Postives = 91/150 (60.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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