CmoCh07G000620 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G000620
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransmembrane protein, putative
LocationCmo_Chr07 : 357761 .. 358690 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTACTATCAAATCGATGGCAGCGATGGCCGTGTATTTGCTGTTTATCGTCGCAATCGCGGCGGCGCTGGAGATTCGGCCGTCGGAGCATGGTCTGGAGTTTCAGAGCCTTCCGGCAGCGGGAGACAAATCGTCGCCGGAGATGCGGTCGTTCTTCGGAGGAACTTCGTCGCCGACGCCGGAAGTGGCATTGCCGTTGCCGAAGGCGATGAATTCCAGCGAGGCGCCGGGATGGTGGACCCACCGTGACGGTGGAGATAAACGACTGAGAAATGCACTATTGGTGGCGACGGCGGCTTGTGGAATAACAGGTGTCACTTTATTAGTCGGTTCTACGTTATACTACATTTTTAAGGTAAAAAATCAAAGATCATTGCCGCTCTCTTCTAACAACAGTAATCACAAATAAAGATAAGATATCATCAACAATTGTGATAATACCATTACGGTTTACACCAAGAATCTAGCTGTCTTAGCCAAGAGTCATACTGTTATAACTTTTGAAATAGTGATATTTCCCAGTTCCAAATTTTCCTTACTGTATGAGATGTCATTTTAATTACGAAATTAGACAATTTTATTGCCATTGATTGTATGTTGGGAATCTGTATGCTCATGTACCAATAATTTGTCGATATCAATAAAAAGAAAAAAAAGGAAATTCTTTAAAGTTTTGATTATGTTATTGCTTTGCGTGTTTGCCTCTTCTATAAGAAAATAATATTCTCAACCAAATTTTACATGTAAGCATGAAAACGCGTGGGGGACCTGGGGATATTGAGAAGTGTTTCAAAGAAATGTGATAAGATTTGATATTAAAATGATTAGAACAGCGTACCCAATTATTGTTGGAAACATTTTGAGCTATTATTCTATTTGATCATTTATTACTTTCTTTTTCCAGATGAACATTGATTTAAGTGTTTAA

mRNA sequence

ATGATTACTATCAAATCGATGGCAGCGATGGCCGTGTATTTGCTGTTTATCGTCGCAATCGCGGCGGCGCTGGAGATTCGGCCGTCGGAGCATGGTCTGGAGTTTCAGAGCCTTCCGGCAGCGGGAGACAAATCGTCGCCGGAGATGCGGTCGTTCTTCGGAGGAACTTCGTCGCCGACGCCGGAAGTGGCATTGCCGTTGCCGAAGGCGATGAATTCCAGCGAGGCGCCGGGATGGTGGACCCACCGTGACGGTGGAGATAAACGACTGAGAAATGCACTATTGGTGGCGACGGCGGCTTGTGGAATAACAGGTGTCACTTTATTAGTCGGTTCTACGTTATACTACATTTTTAAGATGAACATTGATTTAAGTGTTTAA

Coding sequence (CDS)

ATGATTACTATCAAATCGATGGCAGCGATGGCCGTGTATTTGCTGTTTATCGTCGCAATCGCGGCGGCGCTGGAGATTCGGCCGTCGGAGCATGGTCTGGAGTTTCAGAGCCTTCCGGCAGCGGGAGACAAATCGTCGCCGGAGATGCGGTCGTTCTTCGGAGGAACTTCGTCGCCGACGCCGGAAGTGGCATTGCCGTTGCCGAAGGCGATGAATTCCAGCGAGGCGCCGGGATGGTGGACCCACCGTGACGGTGGAGATAAACGACTGAGAAATGCACTATTGGTGGCGACGGCGGCTTGTGGAATAACAGGTGTCACTTTATTAGTCGGTTCTACGTTATACTACATTTTTAAGATGAACATTGATTTAAGTGTTTAA
BLAST of CmoCh07G000620 vs. TrEMBL
Match: A0A0A0KM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525480 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.7e-44
Identity = 93/119 (78.15%), Postives = 102/119 (85.71%), Query Frame = 1

Query: 1   MITIKSMAAMAVYLLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPT 60
           MI IKS AA+  +   I +IAA  EIRPSEHGLEFQS P  GDKSSPEMRSFFGG +SPT
Sbjct: 1   MIPIKSSAAIVAFFSLIASIAAVSEIRPSEHGLEFQSPPPVGDKSSPEMRSFFGGIASPT 60

Query: 61  PEVALPLPKAMNSSEAPGWWTHRDGGDKRLRNALLVATAACGITGVTLLVGSTLYYIFK 120
           PEVALP+PK +NSSE+PGWW H DGG+KRLRNALLVATAACGITGVTLLVGSTL+YIFK
Sbjct: 61  PEVALPIPKTLNSSESPGWWNHHDGGNKRLRNALLVATAACGITGVTLLVGSTLFYIFK 119

BLAST of CmoCh07G000620 vs. TrEMBL
Match: A0A067GIM5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032175mg PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16
Identity = 56/112 (50.00%), Postives = 69/112 (61.61%), Query Frame = 1

Query: 14  LLFIVAIAAAL--EIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPTPEV--ALPLPK 73
           L+ I+ I A L  E+RPS+HGLE+QS P + +KSSP+M SFF G+SSP P       LP 
Sbjct: 13  LITIILIRATLSRELRPSDHGLEYQSPPPSSEKSSPQMTSFFEGSSSPPPSQPNRFALPT 72

Query: 74  AMNSSEAPGWWTHRDGGDKR--LRNALLVATAACGITGVTLLVGSTLYYIFK 120
           AMNSS     W    GG  R   R+ +LVAT ACG+TG  LLV S   Y +K
Sbjct: 73  AMNSSTDDTSWLSGGGGGGRDHARHVMLVATVACGVTGAVLLVASAFIYFYK 124

BLAST of CmoCh07G000620 vs. TrEMBL
Match: V4U878_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017085mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-16
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 1

Query: 8   AAMAVYLLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSS--PTPEVAL 67
           A M +    ++    + E+RPS+HGLE+QS P + +KSSP+M SFF G+SS  P+P    
Sbjct: 9   AYMPLITTILIRATLSRELRPSDHGLEYQSPPPSSEKSSPQMTSFFEGSSSPPPSPPNRF 68

Query: 68  PLPKAMNSSEAPGWWTHRDGGDKR--LRNALLVATAACGITGVTLLVGSTLYYIFK 120
            LP AMNSS     W    GG  R  +R+ +LVAT ACG+TG  LLV S   Y +K
Sbjct: 69  ALPTAMNSSTDDTSWLSGGGGGGRDHVRHVMLVATVACGVTGAVLLVASAFIYFYK 124

BLAST of CmoCh07G000620 vs. TrEMBL
Match: A0A067KFC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09219 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.2e-16
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 1

Query: 14  LLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPTPEVA--LPLPKAM 73
           ++ I+  +   E+RPS HGL++QS P +G+K  PE++ FFG +S+PT + +  + LPKAM
Sbjct: 13  MIMILGGSKGRELRPSYHGLDYQSTPPSGEKLPPEVKEFFGSSSAPTSKSSSNVALPKAM 72

Query: 74  NSSEAPGWWTH---RDGGDK---RLRNALLVATAACGITGVTLLVGSTLYYIFK 120
           NS++   WW      +GG K   RLR+ LLVA+ ACG+TG  LLV S   Y  K
Sbjct: 73  NSNDT-AWWNRVAGENGGSKGGDRLRHVLLVASLACGVTGAALLVASAFIYFVK 125

BLAST of CmoCh07G000620 vs. TrEMBL
Match: A0A0L9TJS3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g036000 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.8e-15
Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = 1

Query: 12  VYLLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPTPEVA----LPL 71
           V+   +V   A+ E+RPSEHGL FQ+L  AG  SSPEMRSFF   +S +P ++    + L
Sbjct: 8   VFFAGVVLAGASRELRPSEHGLTFQTLSPAGAHSSPEMRSFFNSANS-SPAMSSSSDVAL 67

Query: 72  PKAMNSSEA--PGWWTHRDG-GDKRLRNALLVATAACGITGVTLLVGSTLYYIFK 120
           P+AMNS +A  P WW    G G   +  AL VA+  CG+ G  LLV S L Y+FK
Sbjct: 68  PRAMNSGDASPPTWWHPARGHGGDGMGKALTVASLVCGVAGAVLLVASALIYLFK 121

BLAST of CmoCh07G000620 vs. TAIR10
Match: AT4G21740.1 (AT4G21740.1 unknown protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11
Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 1

Query: 13  YLLFIVAIAAALEIRPSEHGLEFQ-SLPAAGDKSSP-EMRSFFGGTSSPTPEVALP--LP 72
           +L+     + A E+RPS+HGL++Q S P     S P +M+SFFG + S +P  + P  LP
Sbjct: 22  FLVIFTGNSLAGELRPSDHGLQYQFSSPPTESHSPPGKMKSFFGDSHSSSPPPSHPQLLP 81

Query: 73  KAM--NSSEAPGWWTHRDGG----DKRLRNALLVATAACGITGVTLLVGSTLYYIFK 120
           KA   +  +   WW  RDG     D  +R+  L A+  CG++GV LLV  TL Y F+
Sbjct: 82  KATAADGGDDDSWW--RDGAGIRRDHVMRHVFLAASIICGVSGVALLVVFTLIYFFR 136

BLAST of CmoCh07G000620 vs. TAIR10
Match: AT1G30515.1 (AT1G30515.1 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 4.1e-07
Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 1

Query: 10  MAVYLLFIVAIAAAL----EIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSS-PTPEVA 69
           +++ ++FI+ + + +    E+RPS+HGLE+   P      S EM SFFG  SS     ++
Sbjct: 13  ISMLIMFIIVLESTIINARELRPSDHGLEYYYEPG----ESSEMTSFFGPPSSNDLTSIS 72

Query: 70  LPLPKAMNSS-EAPGWWTHRDGGDKRLRN-ALLVATAACGITGVTLLVGSTLYY 117
            P    + S+ ++P     +D  D R+ N  L+V +  CG++GV L+V S L Y
Sbjct: 73  SPSSSILPSAVKSPMKTLSKDQDDDRVMNHVLVVGSLVCGLSGVALMVASALIY 122

BLAST of CmoCh07G000620 vs. NCBI nr
Match: gi|700194258|gb|KGN49462.1| (hypothetical protein Csa_6G525480 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 6.7e-44
Identity = 93/119 (78.15%), Postives = 102/119 (85.71%), Query Frame = 1

Query: 1   MITIKSMAAMAVYLLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPT 60
           MI IKS AA+  +   I +IAA  EIRPSEHGLEFQS P  GDKSSPEMRSFFGG +SPT
Sbjct: 1   MIPIKSSAAIVAFFSLIASIAAVSEIRPSEHGLEFQSPPPVGDKSSPEMRSFFGGIASPT 60

Query: 61  PEVALPLPKAMNSSEAPGWWTHRDGGDKRLRNALLVATAACGITGVTLLVGSTLYYIFK 120
           PEVALP+PK +NSSE+PGWW H DGG+KRLRNALLVATAACGITGVTLLVGSTL+YIFK
Sbjct: 61  PEVALPIPKTLNSSESPGWWNHHDGGNKRLRNALLVATAACGITGVTLLVGSTLFYIFK 119

BLAST of CmoCh07G000620 vs. NCBI nr
Match: gi|985434079|ref|XP_015382571.1| (PREDICTED: uncharacterized protein LOC102610439 [Citrus sinensis])

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 56/112 (50.00%), Postives = 69/112 (61.61%), Query Frame = 1

Query: 14  LLFIVAIAAAL--EIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPTPEV--ALPLPK 73
           L+ I+ I A L  E+RPS+HGLE+QS P + +KSSP+M SFF G+SSP P       LP 
Sbjct: 13  LITIILIRATLSRELRPSDHGLEYQSPPPSSEKSSPQMTSFFEGSSSPPPSQPNRFALPT 72

Query: 74  AMNSSEAPGWWTHRDGGDKR--LRNALLVATAACGITGVTLLVGSTLYYIFK 120
           AMNSS     W    GG  R   R+ +LVAT ACG+TG  LLV S   Y +K
Sbjct: 73  AMNSSTDDTSWLSGGGGGGRDHARHVMLVATVACGVTGAVLLVASAFIYFYK 124

BLAST of CmoCh07G000620 vs. NCBI nr
Match: gi|567913157|ref|XP_006448892.1| (hypothetical protein CICLE_v10017085mg [Citrus clementina])

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 1

Query: 8   AAMAVYLLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSS--PTPEVAL 67
           A M +    ++    + E+RPS+HGLE+QS P + +KSSP+M SFF G+SS  P+P    
Sbjct: 9   AYMPLITTILIRATLSRELRPSDHGLEYQSPPPSSEKSSPQMTSFFEGSSSPPPSPPNRF 68

Query: 68  PLPKAMNSSEAPGWWTHRDGGDKR--LRNALLVATAACGITGVTLLVGSTLYYIFK 120
            LP AMNSS     W    GG  R  +R+ +LVAT ACG+TG  LLV S   Y +K
Sbjct: 69  ALPTAMNSSTDDTSWLSGGGGGGRDHVRHVMLVATVACGVTGAVLLVASAFIYFYK 124

BLAST of CmoCh07G000620 vs. NCBI nr
Match: gi|802620563|ref|XP_012075617.1| (PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 1

Query: 14  LLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPTPEVA--LPLPKAM 73
           ++ I+  +   E+RPS HGL++QS P +G+K  PE++ FFG +S+PT + +  + LPKAM
Sbjct: 13  MIMILGGSKGRELRPSYHGLDYQSTPPSGEKLPPEVKEFFGSSSAPTSKSSSNVALPKAM 72

Query: 74  NSSEAPGWWTH---RDGGDK---RLRNALLVATAACGITGVTLLVGSTLYYIFK 120
           NS++   WW      +GG K   RLR+ LLVA+ ACG+TG  LLV S   Y  K
Sbjct: 73  NSNDT-AWWNRVAGENGGSKGGDRLRHVLLVASLACGVTGAALLVASAFIYFVK 125

BLAST of CmoCh07G000620 vs. NCBI nr
Match: gi|659068595|ref|XP_008445240.1| (PREDICTED: uncharacterized protein LOC103488324 [Cucumis melo])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 57/121 (47.11%), Postives = 79/121 (65.29%), Query Frame = 1

Query: 8   AAMAVYLLFIVAIAAALEIRPSEHGLEFQSLPAAGDKSSPEMRSFFGGTSSPTPEVALPL 67
           +++A+ +L +  ++ A ++RPSEHGL++Q+ P A   SSP+M+SFF G S    +VALP 
Sbjct: 16  SSLALIILLLAPLSNARDLRPSEHGLDYQN-PDAIQNSSPQMQSFFKGNSWSNSDVALP- 75

Query: 68  PKAMNSSEAPGWW--THRD-------GGDKRLRNALLVATAACGITGVTLLVGSTLYYIF 120
            KAMN+S  P WW  +HR+       GGD  +R ALLVA+  CGI GV+LLV S   Y F
Sbjct: 76  -KAMNTSLPPQWWNRSHRNRSGASAAGGD-HIRGALLVASLVCGIIGVSLLVASAFIYFF 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KM65_CUCSA4.7e-4478.15Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525480 PE=4 SV=1[more]
A0A067GIM5_CITSI1.9e-1650.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032175mg PE=4 SV=1[more]
V4U878_9ROSI7.1e-1645.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017085mg PE=4 SV=1[more]
A0A067KFC4_JATCU9.2e-1644.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09219 PE=4 SV=1[more]
A0A0L9TJS3_PHAAN7.8e-1546.96Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g036000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G21740.12.7e-1139.32 unknown protein[more]
AT1G30515.14.1e-0733.33 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700194258|gb|KGN49462.1|6.7e-4478.15hypothetical protein Csa_6G525480 [Cucumis sativus][more]
gi|985434079|ref|XP_015382571.1|2.7e-1650.00PREDICTED: uncharacterized protein LOC102610439 [Citrus sinensis][more]
gi|567913157|ref|XP_006448892.1|1.0e-1545.69hypothetical protein CICLE_v10017085mg [Citrus clementina][more]
gi|802620563|ref|XP_012075617.1|1.3e-1544.74PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas][more]
gi|659068595|ref|XP_008445240.1|1.3e-1547.11PREDICTED: uncharacterized protein LOC103488324 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G000620.1CmoCh07G000620.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37189FAMILY NOT NAMEDcoord: 1..120
score: 1.8

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G000620Cucsa.048270Cucumber (Gy14) v1cgycmoB0043
CmoCh07G000620CmaCh13G004920Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G000620Cla019521Watermelon (97103) v1cmowmB809
CmoCh07G000620Cla009829Watermelon (97103) v1cmowmB816
CmoCh07G000620Csa6G525480Cucumber (Chinese Long) v2cmocuB865
CmoCh07G000620MELO3C007074Melon (DHL92) v3.5.1cmomeB782
CmoCh07G000620ClCG01G025150Watermelon (Charleston Gray)cmowcgB755
CmoCh07G000620ClCG03G006250Watermelon (Charleston Gray)cmowcgB760
CmoCh07G000620CSPI06G36860Wild cucumber (PI 183967)cmocpiB873
CmoCh07G000620Lsi02G009440Bottle gourd (USVL1VR-Ls)cmolsiB783
CmoCh07G000620Lsi01G000810Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G000620Cp4.1LG20g05630Cucurbita pepo (Zucchini)cmocpeB818
CmoCh07G000620Cp4.1LG09g07260Cucurbita pepo (Zucchini)cmocpeB798
CmoCh07G000620Cp4.1LG10g06470Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G000620Cp4.1LG19g05600Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G000620MELO3C007074.2Melon (DHL92) v3.6.1cmomedB886
CmoCh07G000620CsaV3_6G052360Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G000620Cla97C03G057540Watermelon (97103) v2cmowmbB857
CmoCh07G000620Cla97C01G025190Watermelon (97103) v2cmowmbB849
CmoCh07G000620Bhi03G000146Wax gourdcmowgoB1062
CmoCh07G000620Carg14963Silver-seed gourdcarcmoB0996
CmoCh07G000620Carg22577Silver-seed gourdcarcmoB0572
CmoCh07G000620Carg21398Silver-seed gourdcarcmoB0539
CmoCh07G000620Carg19317Silver-seed gourdcarcmoB0410
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G000620CmoCh18G004870Cucurbita moschata (Rifu)cmocmoB350
CmoCh07G000620CmoCh03G014470Cucurbita moschata (Rifu)cmocmoB459
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G000620Cucurbita moschata (Rifu)cmocmoB190
CmoCh07G000620Cucurbita maxima (Rimu)cmacmoB429
CmoCh07G000620Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G000620Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G000620Cucumber (Gy14) v2cgybcmoB843