CmoCh18G004870 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATTCCCTCGCAAATTGCTGCATTCGCCGCCGTCTATTGCTTTCTCGCCGCCATTTTCTTCTTCGGATGCTCAAATGCGAGAGACCTGCGTCCATCGGAGCACGGTTTGGAGTACCAAAACCCTGGCGCTACTGGAAACTCTTCATCGAATATGCAATCGTTCTTCCAAGGAAACTCCTGGTCCTCCTCCGAGGTCGAGCTTCCGAAGGCGGTGAACACGAGCCTGCCGTCGCAGTGGTGGAATCGCAGCCACGCTAACCGCTCTGGAGCAGGCGGAGATCACATTCGCGGCGCGTTGATTGTTGTGAGTTTGGTATGTGGAATTATAGGCTTTTCTTTACTGATTGCTTCTGCTTTTATTTACTTCTTCAAGTTCAAGAAGCAGAATAGTAGATCGCCGTCCTCGCTTTCTGCCTCTGAAACTGCTAGCATTATTGTCAGCAAGTGA ATGGCGATTCCCTCGCAAATTGCTGCATTCGCCGCCGTCTATTGCTTTCTCGCCGCCATTTTCTTCTTCGGATGCTCAAATGCGAGAGACCTGCGTCCATCGGAGCACGGTTTGGAGTACCAAAACCCTGGCGCTACTGGAAACTCTTCATCGAATATGCAATCGTTCTTCCAAGGAAACTCCTGGTCCTCCTCCGAGGTCGAGCTTCCGAAGGCGGTGAACACGAGCCTGCCGTCGCAGTGGTGGAATCGCAGCCACGCTAACCGCTCTGGAGCAGGCGGAGATCACATTCGCGGCGCGTTGATTGTTGTGAGTTTGGTATGTGGAATTATAGGCTTTTCTTTACTGATTGCTTCTGCTTTTATTTACTTCTTCAAGTTCAAGAAGCAGAATAGTAGATCGCCGTCCTCGCTTTCTGCCTCTGAAACTGCTAGCATTATTGTCAGCAAGTGA ATGGCGATTCCCTCGCAAATTGCTGCATTCGCCGCCGTCTATTGCTTTCTCGCCGCCATTTTCTTCTTCGGATGCTCAAATGCGAGAGACCTGCGTCCATCGGAGCACGGTTTGGAGTACCAAAACCCTGGCGCTACTGGAAACTCTTCATCGAATATGCAATCGTTCTTCCAAGGAAACTCCTGGTCCTCCTCCGAGGTCGAGCTTCCGAAGGCGGTGAACACGAGCCTGCCGTCGCAGTGGTGGAATCGCAGCCACGCTAACCGCTCTGGAGCAGGCGGAGATCACATTCGCGGCGCGTTGATTGTTGTGAGTTTGGTATGTGGAATTATAGGCTTTTCTTTACTGATTGCTTCTGCTTTTATTTACTTCTTCAAGTTCAAGAAGCAGAATAGTAGATCGCCGTCCTCGCTTTCTGCCTCTGAAACTGCTAGCATTATTGTCAGCAAGTGA
BLAST of CmoCh18G004870 vs. TrEMBL
Match: A0A0A0LVV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538210 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43 Identity = 104/154 (67.53%), Postives = 119/154 (77.27%), Query Frame = 1
BLAST of CmoCh18G004870 vs. TrEMBL
Match: W9RI93_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026007 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.1e-18 Identity = 67/153 (43.79%), Postives = 85/153 (55.56%), Query Frame = 1
BLAST of CmoCh18G004870 vs. TrEMBL
Match: A0A061G7V3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026915 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.4e-16 Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 1
BLAST of CmoCh18G004870 vs. TrEMBL
Match: A0A067KFC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09219 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-15 Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 1
BLAST of CmoCh18G004870 vs. TrEMBL
Match: A9PI37_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.9e-15 Identity = 60/151 (39.74%), Postives = 82/151 (54.30%), Query Frame = 1
BLAST of CmoCh18G004870 vs. TAIR10
Match: AT4G21740.1 (AT4G21740.1 unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 1
BLAST of CmoCh18G004870 vs. TAIR10
Match: AT1G30515.1 (AT1G30515.1 unknown protein) HSP 1 Score: 57.8 bits (138), Expect = 6.8e-09 Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 1
BLAST of CmoCh18G004870 vs. NCBI nr
Match: gi|659068595|ref|XP_008445240.1| (PREDICTED: uncharacterized protein LOC103488324 [Cucumis melo]) HSP 1 Score: 193.4 bits (490), Expect = 2.9e-46 Identity = 108/153 (70.59%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of CmoCh18G004870 vs. NCBI nr
Match: gi|778661965|ref|XP_011659106.1| (PREDICTED: uncharacterized protein LOC105436136 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 3.0e-43 Identity = 104/154 (67.53%), Postives = 119/154 (77.27%), Query Frame = 1
BLAST of CmoCh18G004870 vs. NCBI nr
Match: gi|703106697|ref|XP_010098565.1| (hypothetical protein L484_026007 [Morus notabilis]) HSP 1 Score: 99.8 bits (247), Expect = 4.4e-18 Identity = 67/153 (43.79%), Postives = 85/153 (55.56%), Query Frame = 1
BLAST of CmoCh18G004870 vs. NCBI nr
Match: gi|590614257|ref|XP_007022886.1| (Uncharacterized protein TCM_026915 [Theobroma cacao]) HSP 1 Score: 92.0 bits (227), Expect = 9.2e-16 Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 1
BLAST of CmoCh18G004870 vs. NCBI nr
Match: gi|643726123|gb|KDP34931.1| (hypothetical protein JCGZ_09219 [Jatropha curcas]) HSP 1 Score: 90.9 bits (224), Expect = 2.1e-15 Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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