Lsi02G005030 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G005030
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionHCP-like superfamily protein with MYND-type zinc finger
Locationchr02 : 4272816 .. 4274657 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCGTTGCTGCGTCGCTTAGAGATATAAATTGAACGCACTCGATTCGTTTTGCCGTCACTTCATCCATTTGCTCTAACAACGATCCAATTCTGCCTTCATTTCATCCTCCATTAACGGACCTCCATTTTTGCACTCCTCTCATGGCGGTTTTATTTTCAAGGTGAAGGCCACAACGAAAACTACTCTATTGCATTCCGGAATGGTGTGCAATAAAAGGAGGAGAACGTCCACCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTGCCGGACGATCTAGTCGTCGTCGTCCTTAGCAAGCTTAGCGCCACCGCTTCTTCTCCTTCCGACATCGTCAATGTTATGATAACGTAAGAATTGCCGTGTGATTCGCCTAATTCCTCGAGTTTGTTGTAATTTTCTGTTTGATGTTTATGTGATTTTTTTTTTTTTTGGCGAATTATAGATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTGTCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGGTACGTGTAATTGATTGATATTCCTTTCTGCAATTTCAAACTGAGTTGATTTTGAATCTTAATTTTCGTTTTCTGTTTTCGTTTTTTTTTTTTCAGATCGAGTTTTATTGTTTGAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCAATTAAATCTCATCCATTGGCGCTTTACTCGCTCGCCATCGTACAATTTAACGGAAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGAGCCGGAGTGGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGCCCCTCAAAACGCTTCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCGTCCATAACAAATTCCTCCCTCTGCCGTCTCCACTGCTCCATCGACCGCCCGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGATTTCGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATTTATCGCGGAAGGACTGAGACTTTGCTCAAATAGTGGATGTGGAAGGCCAGAAACTCGGCTACATGAATTCCGGCGATGCTCGGTTTGTGGTAATGTAAACTATTGCTCGCGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCACAAGATGGAATGTGCGCCGTTCGATCGGTGGCTAATCGAGGACGATGACCTCGAAGGTGACGAAGACGGCGGCGTAAATAGAATTCAGCAGTTTGGAGACGGTGAGCATGTGGAATCTGAATAATATTTGATGATTAAAAGCAAGGCTTACTTCTGTTGCTGAACATCAATTTATTTACCTTTTTAAAGTTCCATTTATTTTATTTTTTTACCTTCTCGTCTTTTTAACATAGAGATGACTTCTCGAGGTTTTTGCCCGTATAGTAACAGTCTTCTTCTTTTCTTTTTTTTTCAATAGTAATTTTCAATTTTTTTTAAGAAATAATTTTCTATTATCTTGTCGGTACAGAATGTAAATTTAAAATGTGTATATTTACAATTTTTTAGGTTAAAAACTCAAAACACGTTTCAATGCTCGAGGTTTTTGTCTGCTACAGGTTCCCCCTCCCCCAGTTTCATTTTCAATTTACTTGTTACAAAATGTAAATTCAATGTGAATATTTAATTAAGATTTTGTTTTAT

mRNA sequence

GCCGTTGCTGCGTCGCTTAGAGATATAAATTGAACGCACTCGATTCGTTTTGCCGTCACTTCATCCATTTGCTCTAACAACGATCCAATTCTGCCTTCATTTCATCCTCCATTAACGGACCTCCATTTTTGCACTCCTCTCATGGCGGTTTTATTTTCAAGGTGAAGGCCACAACGAAAACTACTCTATTGCATTCCGGAATGGTGTGCAATAAAAGGAGGAGAACGTCCACCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTGCCGGACGATCTAGTCGTCGTCGTCCTTAGCAAGCTTAGCGCCACCGCTTCTTCTCCTTCCGACATCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTGTCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCAATTAAATCTCATCCATTGGCGCTTTACTCGCTCGCCATCGTACAATTTAACGGAAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGAGCCGGAGTGGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGCCCCTCAAAACGCTTCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCGTCCATAACAAATTCCTCCCTCTGCCGTCTCCACTGCTCCATCGACCGCCCGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGATTTCGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATTTATCGCGGAAGGACTGAGACTTTGCTCAAATAGTGGATGTGGAAGGCCAGAAACTCGGCTACATGAATTCCGGCGATGCTCGGTTTGTGGTAATGTAAACTATTGCTCGCGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCACAAGATGGAATGTGCGCCGTTCGATCGGTGGCTAATCGAGGACGATGACCTCGAAGGTGACGAAGACGGCGGCGTAAATAGAATTCAGCAGTTTGGAGACGGTGAGCATGTGGAATCTGAATAATATTTGATGATTAAAAGCAAGGCTTACTTCTGTTGCTGAACATCAATTTATTTACCTTTTTAAAGTTCCATTTATTTTATTTTTTTACCTTCTCGTCTTTTTAACATAGAGATGACTTCTCGAGGTTTTTGCCCGTATAGTAACAGTCTTCTTCTTTTCTTTTTTTTTCAATAGTAATTTTCAATTTTTTTTAAGAAATAATTTTCTATTATCTTGTCGGTACAGAATGTAAATTTAAAATGTGTATATTTACAATTTTTTAGGTTAAAAACTCAAAACACGTTTCAATGCTCGAGGTTTTTGTCTGCTACAGGTTCCCCCTCCCCCAGTTTCATTTTCAATTTACTTGTTACAAAATGTAAATTCAATGTGAATATTTAATTAAGATTTTGTTTTAT

Coding sequence (CDS)

ATGGTGTGCAATAAAAGGAGGAGAACGTCCACCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTGCCGGACGATCTAGTCGTCGTCGTCCTTAGCAAGCTTAGCGCCACCGCTTCTTCTCCTTCCGACATCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTGTCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCAATTAAATCTCATCCATTGGCGCTTTACTCGCTCGCCATCGTACAATTTAACGGAAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGAGCCGGAGTGGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGCCCCTCAAAACGCTTCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCGTCCATAACAAATTCCTCCCTCTGCCGTCTCCACTGCTCCATCGACCGCCCGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGATTTCGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATTTATCGCGGAAGGACTGAGACTTTGCTCAAATAGTGGATGTGGAAGGCCAGAAACTCGGCTACATGAATTCCGGCGATGCTCGGTTTGTGGTAATGTAAACTATTGCTCGCGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCACAAGATGGAATGTGCGCCGTTCGATCGGTGGCTAATCGAGGACGATGACCTCGAAGGTGACGAAGACGGCGGCGTAAATAGAATTCAGCAGTTTGGAGACGGTGAGCATGTGGAATCTGAATAA

Protein sequence

MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGAPQNASEGRRLLIEANARELASITNSSLCRLHCSIDRPSATDSGGSLLSDFGCNFPAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEHVESE
Homology
[Close]
BLAST of Lsi02G005030 vs. Swiss-Prot
Match: FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 3.1e-123
Identity = 220/345 (63.77%), Postives = 263/345 (76.23%), Query Frame = 1 

Query: 12  STGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHPIVLSKAGP 71
           +TGA   DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++PIVLS+  P
Sbjct: 38  TTGA---DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSP 97

Query: 72  KAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHP 131
           KA  ++  NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG+GASLMAKAAI SH 
Sbjct: 98  KAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHA 157

Query: 132 LALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGAPQNAS 191
            ALYSLA++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYG PQN S
Sbjct: 158 PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVS 217

Query: 192 EGRRLLIEANARELASITNSSL----CRLHCSIDRPSATDSGGS----LLSDFGCNFPAP 251
           EGRR L++ANARELA++ +S +      L  S   P    + G     LLSDFGCN PAP
Sbjct: 218 EGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAP 277

Query: 252 EAHPANQFLRDWFA-SGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQ 311
           E HPAN+FL DWFA  G     +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQ
Sbjct: 278 ETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQ 337

Query: 312 ALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEHV 348
           ALDWKLRHKM+CAP  RWL E D  EG+      +I   G+G++V
Sbjct: 338 ALDWKLRHKMDCAPVQRWLEEGDGGEGNV-----QIDGNGNGDNV 374

[Close]
BLAST of Lsi02G005030 vs. Swiss-Prot
Match: FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 4.1e-115
Identity = 197/327 (60.24%), Postives = 249/327 (76.15%), Query Frame = 1 

Query: 4   NKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  SGASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGAPQNASEGRRLLIEANARELASITNSSLCRLHCSIDRPSATDSGGSLLSDFGCNFPAP 243
           YG P++ SEGRRLLI+ANARELA       C L   +   S  ++    L+D     P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-------CSLRSYLSLKSGDEN--ETLTDLSV-VPVQ 244

Query: 244 EAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 303
           E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 304 LDWKLRHKMECAPFDRWLIEDDDLEGD 331
           LDW+ +HK+EC P D W+    ++  D
Sbjct: 305 LDWRAKHKVECTPLDLWVAAAAEIGDD 321

[Close]
BLAST of Lsi02G005030 vs. TrEMBL
Match: A0A0A0LTV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.1e-188
Identity = 327/351 (93.16%), Postives = 335/351 (95.44%), Query Frame = 1 

Query: 1   MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFDGLPDDLVVVVL KLSATASSP D+VNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGAPQNASEGRRLLIEANARELASITNSSLCRLHCSIDRPSATDSGGSLLSDFGCNF 240
           QDGYG PQN SEGRRLLIEANARELA ITNSSL RLHCS  R SATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGG-VNRIQQFGDGEHVESE 351
           CQALDWKLRHK ECAPFDRWLIE+D+LEGD+DGG VNRI+QF DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]
BLAST of Lsi02G005030 vs. TrEMBL
Match: M5WT99_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008057mg PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.2e-131
Identity = 234/354 (66.10%), Postives = 274/354 (77.40%), Query Frame = 1 

Query: 1   MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLA 60
           M  ++++  S+      SD FDGLPDDLVV +L KLS++ASSPSD++N++ITCKR NRL 
Sbjct: 4   MTLHRKKLKSSRRTTAKSDFFDGLPDDLVVFILCKLSSSASSPSDLINILITCKRLNRLG 63

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LH +VLSKAGPKAF I+ KNWS+S HRFLK CVSAGN+EACYTLGMI FY L+NRGSGAS
Sbjct: 64  LHSVVLSKAGPKAFAIRAKNWSDSAHRFLKQCVSAGNIEACYTLGMIRFYSLQNRGSGAS 123

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAA++SH  ALYSLA+VQFNGSGGSK +K+LRAGVALC RAA LGH+DALRELGHCL
Sbjct: 124 LMAKAAMRSHAPALYSLAVVQFNGSGGSKKEKDLRAGVALCARAASLGHVDALRELGHCL 183

Query: 181 QDGYGAPQNASEGRRLLIEANARELASITNSSLCRLH-------CSIDRPSATDSGGSLL 240
           QDGYG  QN +EGRRLL++ANARELAS+  S+  R H       C     S       LL
Sbjct: 184 QDGYGVKQNVAEGRRLLVQANARELASVLRSATWRSHHYQHLYACLTGLVSC-----PLL 243

Query: 241 SDFGCNFPAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGN 300
           SDFGCN PAPE HPAN+FL++WF SGR    +G+RLCS+ GCGRPETR HEFRRCSVCG 
Sbjct: 244 SDFGCNVPAPELHPANRFLKEWFGSGRAISGQGMRLCSHVGCGRPETRPHEFRRCSVCGT 303

Query: 301 VNYCSRGCQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEHV 348
           VNYCSRGCQALDWKLRHK++C P +RWL  D +L G  +G        GDGE+V
Sbjct: 304 VNYCSRGCQALDWKLRHKVKCKPIERWLGVDGELGGLVEG--------GDGENV 344

[Close]
BLAST of Lsi02G005030 vs. TrEMBL
Match: B9RAG1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506210 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 4.8e-131
Identity = 234/346 (67.63%), Postives = 273/346 (78.90%), Query Frame = 1 

Query: 1   MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLA 60
           M   KR++TS  T    SDLFD LPDD+VV +LSKLS++AS PSD +N++ TCKR NRLA
Sbjct: 1   MYQRKRQKTSRRTPEK-SDLFDELPDDIVVCILSKLSSSASCPSDFINILFTCKRLNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           L P+VLSKAGP+ F ++ KNWS+S HRFLKLC++AGN EA YTLGMI FYCL+NRG GAS
Sbjct: 61  LQPVVLSKAGPQTFAVKAKNWSDSAHRFLKLCINAGNTEASYTLGMIRFYCLQNRGVGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSH  ALYSLA++QFNGSGGSK DK+LRAGV+LC RAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHAPALYSLAVMQFNGSGGSKIDKDLRAGVSLCARAAVLGHIDALRELGHCL 180

Query: 181 QDGYGAPQNASEGRRLLIEANARELASITNSSLC-RLHCSIDRPSAT-----DSGGSLLS 240
           QDGYG  QN +EGRRLL++ANARELAS   S L  + H    R  A+      +G  LLS
Sbjct: 181 QDGYGVAQNIAEGRRLLVQANARELASSLRSMLTWQPHNQHHRQYASCEVMESAGCPLLS 240

Query: 241 DFGCNFPAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNV 300
           DFGCN PA E HPAN+FL +WF SGRG +  GLRLCS+SGCGRPETR HEFRRCSVCG V
Sbjct: 241 DFGCNVPAREVHPANRFLSEWFESGRGLLGPGLRLCSHSGCGRPETRPHEFRRCSVCGTV 300

Query: 301 NYCSRGCQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQ 341
           NYCSRGCQALDWKLRHKMEC P ++WL+ +DD   +E G +  I++
Sbjct: 301 NYCSRGCQALDWKLRHKMECVPLEQWLVVEDDGHDNEIGAMVEIEE 345

[Close]
BLAST of Lsi02G005030 vs. TrEMBL
Match: A0A0D2RJ28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G206200 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129
Identity = 225/341 (65.98%), Postives = 267/341 (78.30%), Query Frame = 1 

Query: 18  SDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           SDLFDGLP+DLV+ +LSKL+++ASSPSD +N+++TCKR NRLALHP+VLSKAG KA  ++
Sbjct: 17  SDLFDGLPEDLVISILSKLASSASSPSDFINILVTCKRLNRLALHPLVLSKAGSKALAVK 76

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHPLALYSL 137
            +NW +S H FLK C++AGNVEACYTLGMI+FYCL+NRGSGASL+AKAAIKSH  ALYSL
Sbjct: 77  ARNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASLLAKAAIKSHAPALYSL 136

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGAPQNASEGRRLL 197
            ++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYG  Q+ +EGRRLL
Sbjct: 137 GVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQHIAEGRRLL 196

Query: 198 IEANARELASITNSSLCR------------LHCSIDRPSATDSGGSLLSDFGCNFPAPEA 257
           I ANARELAS  N+ + R             H S        SG  LLSDFGCN PAPE 
Sbjct: 197 IRANARELASSLNALVKRKPQQQHQRRLNYQHYSF----KAGSGCPLLSDFGCNVPAPEV 256

Query: 258 HPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALD 317
           HP N F ++WF SGRG + +GLRLCS+ GCGRPETR HEFRRCSVCG VNYCSRGCQALD
Sbjct: 257 HPVNVFSKEWFESGRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCGTVNYCSRGCQALD 316

Query: 318 WKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEH 347
           WKLRHK EC P +RWL E  + +    GGV  +++  + EH
Sbjct: 317 WKLRHKAECGPIERWLEEGGNGDDGGHGGVGEMEEVVEAEH 353

[Close]
BLAST of Lsi02G005030 vs. TrEMBL
Match: A0A0B0PKV7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02830 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.6e-129
Identity = 226/341 (66.28%), Postives = 266/341 (78.01%), Query Frame = 1 

Query: 18  SDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           SDLFDGLP+DLV+ +LSKL+ +ASSPSD +N+++TCKR NRLALHP+VLSKAG KA  ++
Sbjct: 17  SDLFDGLPEDLVISILSKLAYSASSPSDFINILVTCKRLNRLALHPLVLSKAGSKALAVK 76

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHPLALYSL 137
             NW +S H FLK C++AGNVEACYTLGMI+FYCL+NRGSGASL+AKAAIKSH  ALYSL
Sbjct: 77  AGNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASLLAKAAIKSHAPALYSL 136

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGAPQNASEGRRLL 197
            ++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYG  Q+ +EGRRLL
Sbjct: 137 GVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQHIAEGRRLL 196

Query: 198 IEANARELASITNSSLCR------------LHCSIDRPSATDSGGSLLSDFGCNFPAPEA 257
           I+ANARELAS  N+ + R             H S        SG  LLSDFGCN PAPE 
Sbjct: 197 IQANARELASSLNALVKRKAQQQHQRRLNYQHYSF----KAGSGCPLLSDFGCNVPAPEV 256

Query: 258 HPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALD 317
           HP N FL++WF SGRG + +GLRLCS+ GCGRPETR HEFRRCSVCG VNYCSRGCQALD
Sbjct: 257 HPVNVFLKEWFESGRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCGTVNYCSRGCQALD 316

Query: 318 WKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEH 347
           WKLRHK EC P +RWL E  +      GGV  +++  + EH
Sbjct: 317 WKLRHKAECGPIERWLEEGGNGNDGGHGGVGEMEEVVEAEH 353

[Close]
BLAST of Lsi02G005030 vs. TAIR10
Match: AT1G67340.1 (AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-124
Identity = 220/345 (63.77%), Postives = 263/345 (76.23%), Query Frame = 1 

Query: 12  STGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHPIVLSKAGP 71
           +TGA   DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++PIVLS+  P
Sbjct: 38  TTGA---DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSP 97

Query: 72  KAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHP 131
           KA  ++  NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG+GASLMAKAAI SH 
Sbjct: 98  KAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHA 157

Query: 132 LALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGAPQNAS 191
            ALYSLA++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYG PQN S
Sbjct: 158 PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVS 217

Query: 192 EGRRLLIEANARELASITNSSL----CRLHCSIDRPSATDSGGS----LLSDFGCNFPAP 251
           EGRR L++ANARELA++ +S +      L  S   P    + G     LLSDFGCN PAP
Sbjct: 218 EGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAP 277

Query: 252 EAHPANQFLRDWFA-SGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQ 311
           E HPAN+FL DWFA  G     +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQ
Sbjct: 278 ETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQ 337

Query: 312 ALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEHV 348
           ALDWKLRHKM+CAP  RWL E D  EG+      +I   G+G++V
Sbjct: 338 ALDWKLRHKMDCAPVQRWLEEGDGGEGNV-----QIDGNGNGDNV 374

[Close]
BLAST of Lsi02G005030 vs. TAIR10
Match: AT5G50450.1 (AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 416.0 bits (1068), Expect = 2.3e-116
Identity = 197/327 (60.24%), Postives = 249/327 (76.15%), Query Frame = 1 

Query: 4   NKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  SGASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGAPQNASEGRRLLIEANARELASITNSSLCRLHCSIDRPSATDSGGSLLSDFGCNFPAP 243
           YG P++ SEGRRLLI+ANARELA       C L   +   S  ++    L+D     P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-------CSLRSYLSLKSGDEN--ETLTDLSV-VPVQ 244

Query: 244 EAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 303
           E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 304 LDWKLRHKMECAPFDRWLIEDDDLEGD 331
           LDW+ +HK+EC P D W+    ++  D
Sbjct: 305 LDWRAKHKVECTPLDLWVAAAAEIGDD 321

[Close]
BLAST of Lsi02G005030 vs. NCBI nr
Match: gi|659067491|ref|XP_008439699.1| (PREDICTED: F-box protein At1g67340 [Cucumis melo])

HSP 1 Score: 683.7 bits (1763), Expect = 1.7e-193
Identity = 333/350 (95.14%), Postives = 340/350 (97.14%), Query Frame = 1 

Query: 1   MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLA 60
           M+CNKRRRTSTS GAGISDLFDGLPDDLVVVVL KLSATASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGAPQNASEGRRLLIEANARELASITNSSLCRLHCSIDRPSATDSGGSLLSDFGCNF 240
           QDGYG PQNASEGRRLLIEANARELA ITNSSL RLHCS  R SATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEHVESE 351
           CQALDWKLRHK ECAPFDRWLIED++LEGDEDGGVNRI+QFGDGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]
BLAST of Lsi02G005030 vs. NCBI nr
Match: gi|449474252|ref|XP_004154118.1| (PREDICTED: F-box protein At1g67340 [Cucumis sativus])

HSP 1 Score: 667.2 bits (1720), Expect = 1.6e-188
Identity = 327/351 (93.16%), Postives = 335/351 (95.44%), Query Frame = 1 

Query: 1   MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFDGLPDDLVVVVL KLSATASSP D+VNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGAPQNASEGRRLLIEANARELASITNSSLCRLHCSIDRPSATDSGGSLLSDFGCNF 240
           QDGYG PQN SEGRRLLIEANARELA ITNSSL RLHCS  R SATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGG-VNRIQQFGDGEHVESE 351
           CQALDWKLRHK ECAPFDRWLIE+D+LEGD+DGG VNRI+QF DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]
BLAST of Lsi02G005030 vs. NCBI nr
Match: gi|645268322|ref|XP_008239475.1| (PREDICTED: F-box protein At1g67340 [Prunus mume])

HSP 1 Score: 478.4 bits (1230), Expect = 1.1e-131
Identity = 237/345 (68.70%), Postives = 275/345 (79.71%), Query Frame = 1 

Query: 5   KRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLALHPI 64
           K+ R+S  T A  SD FDGLPDDLVV +L KLS++ASSPSD++N++ITCKR NRL LH +
Sbjct: 9   KKLRSSRRTTAK-SDFFDGLPDDLVVFILCKLSSSASSPSDLINILITCKRLNRLGLHSV 68

Query: 65  VLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAK 124
           VLSKAGPKAF I+  NWS+S HRFLK CVSAGN+EACYTLGMI FYCL+NRGSGASLMAK
Sbjct: 69  VLSKAGPKAFAIRANNWSDSAHRFLKQCVSAGNIEACYTLGMIRFYCLQNRGSGASLMAK 128

Query: 125 AAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGY 184
           AA++S+  ALYSLA+VQFNGSGGSK +K+LRAGVALC RAA LGH+DALRELGHCLQDGY
Sbjct: 129 AAMRSYAPALYSLAVVQFNGSGGSKKEKDLRAGVALCARAASLGHVDALRELGHCLQDGY 188

Query: 185 GAPQNASEGRRLLIEANARELASITNSSLCRLHCSIDRPSATDSGGS--LLSDFGCNFPA 244
           G  QN +EGRRLL++ANARELAS+  S+  R H      S      S  LLSDFGCN PA
Sbjct: 189 GVKQNVTEGRRLLVQANARELASVLRSATWRSHHYQHLYSCLTGLVSCPLLSDFGCNVPA 248

Query: 245 PEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQ 304
           PE HPAN+FL++WF SGRG   +G+RLCS+ GCGRPETR HEFRRCSVCG VNYCSRGCQ
Sbjct: 249 PELHPANRFLKEWFGSGRGISGQGMRLCSHVGCGRPETRPHEFRRCSVCGTVNYCSRGCQ 308

Query: 305 ALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEHV 348
           ALDWKLRHK++C P +RWL  D +L G  +G        GDGE+V
Sbjct: 309 ALDWKLRHKVKCKPIERWLGVDAELGGLVEG--------GDGENV 344

[Close]
BLAST of Lsi02G005030 vs. NCBI nr
Match: gi|595861387|ref|XP_007211324.1| (hypothetical protein PRUPE_ppa008057mg [Prunus persica])

HSP 1 Score: 476.9 bits (1226), Expect = 3.1e-131
Identity = 234/354 (66.10%), Postives = 274/354 (77.40%), Query Frame = 1 

Query: 1   MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLA 60
           M  ++++  S+      SD FDGLPDDLVV +L KLS++ASSPSD++N++ITCKR NRL 
Sbjct: 4   MTLHRKKLKSSRRTTAKSDFFDGLPDDLVVFILCKLSSSASSPSDLINILITCKRLNRLG 63

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LH +VLSKAGPKAF I+ KNWS+S HRFLK CVSAGN+EACYTLGMI FY L+NRGSGAS
Sbjct: 64  LHSVVLSKAGPKAFAIRAKNWSDSAHRFLKQCVSAGNIEACYTLGMIRFYSLQNRGSGAS 123

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAA++SH  ALYSLA+VQFNGSGGSK +K+LRAGVALC RAA LGH+DALRELGHCL
Sbjct: 124 LMAKAAMRSHAPALYSLAVVQFNGSGGSKKEKDLRAGVALCARAASLGHVDALRELGHCL 183

Query: 181 QDGYGAPQNASEGRRLLIEANARELASITNSSLCRLH-------CSIDRPSATDSGGSLL 240
           QDGYG  QN +EGRRLL++ANARELAS+  S+  R H       C     S       LL
Sbjct: 184 QDGYGVKQNVAEGRRLLVQANARELASVLRSATWRSHHYQHLYACLTGLVSC-----PLL 243

Query: 241 SDFGCNFPAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGN 300
           SDFGCN PAPE HPAN+FL++WF SGR    +G+RLCS+ GCGRPETR HEFRRCSVCG 
Sbjct: 244 SDFGCNVPAPELHPANRFLKEWFGSGRAISGQGMRLCSHVGCGRPETRPHEFRRCSVCGT 303

Query: 301 VNYCSRGCQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQFGDGEHV 348
           VNYCSRGCQALDWKLRHK++C P +RWL  D +L G  +G        GDGE+V
Sbjct: 304 VNYCSRGCQALDWKLRHKVKCKPIERWLGVDGELGGLVEG--------GDGENV 344

[Close]
BLAST of Lsi02G005030 vs. NCBI nr
Match: gi|255540243|ref|XP_002511186.1| (PREDICTED: F-box protein At1g67340 [Ricinus communis])

HSP 1 Score: 475.7 bits (1223), Expect = 6.9e-131
Identity = 234/346 (67.63%), Postives = 273/346 (78.90%), Query Frame = 1 

Query: 1   MVCNKRRRTSTSTGAGISDLFDGLPDDLVVVVLSKLSATASSPSDIVNVMITCKRFNRLA 60
           M   KR++TS  T    SDLFD LPDD+VV +LSKLS++AS PSD +N++ TCKR NRLA
Sbjct: 1   MYQRKRQKTSRRTPEK-SDLFDELPDDIVVCILSKLSSSASCPSDFINILFTCKRLNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           L P+VLSKAGP+ F ++ KNWS+S HRFLKLC++AGN EA YTLGMI FYCL+NRG GAS
Sbjct: 61  LQPVVLSKAGPQTFAVKAKNWSDSAHRFLKLCINAGNTEASYTLGMIRFYCLQNRGVGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSH  ALYSLA++QFNGSGGSK DK+LRAGV+LC RAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHAPALYSLAVMQFNGSGGSKIDKDLRAGVSLCARAAVLGHIDALRELGHCL 180

Query: 181 QDGYGAPQNASEGRRLLIEANARELASITNSSLC-RLHCSIDRPSAT-----DSGGSLLS 240
           QDGYG  QN +EGRRLL++ANARELAS   S L  + H    R  A+      +G  LLS
Sbjct: 181 QDGYGVAQNIAEGRRLLVQANARELASSLRSMLTWQPHNQHHRQYASCEVMESAGCPLLS 240

Query: 241 DFGCNFPAPEAHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNV 300
           DFGCN PA E HPAN+FL +WF SGRG +  GLRLCS+SGCGRPETR HEFRRCSVCG V
Sbjct: 241 DFGCNVPAREVHPANRFLSEWFESGRGLLGPGLRLCSHSGCGRPETRPHEFRRCSVCGTV 300

Query: 301 NYCSRGCQALDWKLRHKMECAPFDRWLIEDDDLEGDEDGGVNRIQQ 341
           NYCSRGCQALDWKLRHKMEC P ++WL+ +DD   +E G +  I++
Sbjct: 301 NYCSRGCQALDWKLRHKMECVPLEQWLVVEDDGHDNEIGAMVEIEE 345

The following BLAST results are available for this feature:
BLAST of Lsi02G005030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB76_ARATH3.1e-12363.77F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1[more]
FB342_ARATH4.1e-11560.24F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1[more]
BLAST of Lsi02G005030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTV0_CUCSA1.1e-18893.16Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050480 PE=4 SV=1[more]
M5WT99_PRUPE2.2e-13166.10Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008057mg PE=4 SV=1[more]
B9RAG1_RICCO4.8e-13167.63Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506210 PE=4 SV=1[more]
A0A0D2RJ28_GOSRA1.2e-12965.98Uncharacterized protein OS=Gossypium raimondii GN=B456_008G206200 PE=4 SV=1[more]
A0A0B0PKV7_GOSAR1.6e-12966.28Uncharacterized protein OS=Gossypium arboreum GN=F383_02830 PE=4 SV=1[more]
BLAST of Lsi02G005030 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67340.11.8e-12463.77 HCP-like superfamily protein with MYND-type zinc finger[more]
AT5G50450.12.3e-11660.24 HCP-like superfamily protein with MYND-type zinc finger[more]
BLAST of Lsi02G005030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067491|ref|XP_008439699.1|1.7e-19395.14PREDICTED: F-box protein At1g67340 [Cucumis melo][more]
gi|449474252|ref|XP_004154118.1|1.6e-18893.16PREDICTED: F-box protein At1g67340 [Cucumis sativus][more]
gi|645268322|ref|XP_008239475.1|1.1e-13168.70PREDICTED: F-box protein At1g67340 [Prunus mume][more]
gi|595861387|ref|XP_007211324.1|3.1e-13166.10hypothetical protein PRUPE_ppa008057mg [Prunus persica][more]
gi|255540243|ref|XP_002511186.1|6.9e-13167.63PREDICTED: F-box protein At1g67340 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002893Znf_MYND
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G005030.1Lsi02G005030.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 18..75
score: 3.2
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 274..314
score: 6.
IPR002893Zinc finger, MYND-typePROFILEPS50865ZF_MYND_2coord: 272..314
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 89..202
score: 2.0
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 19..63
score: 1.
NoneNo IPR availablePANTHERPTHR12298PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDcoord: 8..332
score: 9.3E
NoneNo IPR availablePANTHERPTHR12298:SF7SUBFAMILY NOT NAMEDcoord: 8..332
score: 9.3E
NoneNo IPR availableunknownSSF144232HIT/MYND zinc finger-likecoord: 270..319
score: 1.38
NoneNo IPR availableunknownSSF81901HCP-likecoord: 86..200
score: 7.19

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G005030Csa1G050480Cucumber (Chinese Long) v2culsiB022
Lsi02G005030Csa1G002030Cucumber (Chinese Long) v2culsiB041
Lsi02G005030CSPI01G09530Wild cucumber (PI 183967)cpilsiB021
Lsi02G005030CSPI01G00540Wild cucumber (PI 183967)cpilsiB041
Lsi02G005030Cucsa.392080Cucumber (Gy14) v1cgylsiB633
Lsi02G005030Cucsa.157340Cucumber (Gy14) v1cgylsiB249
Lsi02G005030CmaCh18G003180Cucurbita maxima (Rimu)cmalsiB373
Lsi02G005030CmaCh10G000620Cucurbita maxima (Rimu)cmalsiB056
Lsi02G005030CmaCh13G008040Cucurbita maxima (Rimu)cmalsiB202
Lsi02G005030CmoCh18G002180Cucurbita moschata (Rifu)cmolsiB356
Lsi02G005030CmoCh13G008360Cucurbita moschata (Rifu)cmolsiB192
Lsi02G005030CmoCh10G000560Cucurbita moschata (Rifu)cmolsiB044
Lsi02G005030Cla019275Watermelon (97103) v1lsiwmB221
Lsi02G005030Cla002619Watermelon (97103) v1lsiwmB184
Lsi02G005030MELO3C026207Melon (DHL92) v3.5.1lsimeB207
Lsi02G005030MELO3C002360Melon (DHL92) v3.5.1lsimeB179
Lsi02G005030ClCG06G017880Watermelon (Charleston Gray)lsiwcgB199
Lsi02G005030ClCG03G003750Watermelon (Charleston Gray)lsiwcgB184
Lsi02G005030MELO3C002360.2Melon (DHL92) v3.6.1lsimedB189
Lsi02G005030MELO3C026207.2Melon (DHL92) v3.6.1lsimedB214
Lsi02G005030Cla97C03G054890Watermelon (97103) v2lsiwmbB176
Lsi02G005030Cla97C06G127620Watermelon (97103) v2lsiwmbB193
Lsi02G005030Bhi08G001227Wax gourdlsiwgoB242
Lsi02G005030Cp4.1LG09g09610Cucurbita pepo (Zucchini)cpelsiB026
Lsi02G005030Cp4.1LG18g09180Cucurbita pepo (Zucchini)cpelsiB288
Lsi02G005030Cp4.1LG20g03040Cucurbita pepo (Zucchini)cpelsiB423
Lsi02G005030CsGy1G009560Cucumber (Gy14) v2cgyblsiB018
Lsi02G005030CsGy1G000550Cucumber (Gy14) v2cgyblsiB035
Lsi02G005030Carg06796Silver-seed gourdcarlsiB447
Lsi02G005030Carg10281Silver-seed gourdcarlsiB330
Lsi02G005030Carg07602Silver-seed gourdcarlsiB918
Lsi02G005030CsaV3_1G009640Cucumber (Chinese Long) v3cuclsiB022
Lsi02G005030CsaV3_1G000570Cucumber (Chinese Long) v3cuclsiB039
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi02G005030Lsi06G016410Bottle gourd (USVL1VR-Ls)lsilsiB111
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G005030Cucurbita maxima (Rimu)cmalsiB113
Lsi02G005030Cucurbita moschata (Rifu)cmolsiB102
Lsi02G005030Cucurbita pepo (Zucchini)cpelsiB538