Csa1G002030 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G002030
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionF-box family protein; contains IPR001810 (F-box domain, cyclin-like), IPR002893 (Zinc finger, MYND-type), IPR011990 (Tetratricopeptide-like helical)
LocationChr1 : 303161 .. 304602 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAAAAACAAAGAGAGAAAAGATTTCTAAAAAAGAGGAAGCAGAACGGTTACCATTTCCGATTTCCCACACCAAGAGAACGCCGCCGTACCACACTCCTAAATCTCTACTCTCAACGCATGTAATCCCCAAACTCTTCAACAATGATTTCCTCCAAGAGGCCAAGAACATGCCGTAATTTCACCGTAGATTCTGATCTATTCGATGTCTTGCCCGACGATCTCCTTATACATCTCCTCTCTCGCCTTGCCGCCTCCGCCTCCTCCCCTTCTGACCTCCTCAACCTTCTCTTGACGTAATTACATATATGATATATCCCTGTTTTCGTTTTCTTTTTCTTTTTTCCTCTGTTTTTTTTTTTTTTTTTTTTTGGTTTTGTAAATTTCTCTTCTTTTTTGGGATGATTTTGCAGATGTAAGAGGTTGAATCGCTTGGTTCTTAATCCTATGGTTTTGTGTAAAGCCGGACCGAAGGCGTTCGCAGTAAGAATGCGAAACTGGTCTGATTCCGCTCACCGATTTCTGAAACGCTGCGTCGATGCCGGTAATTCGGAAGCGAGTTACACGCTTGGAATGGTTAGTTTTTTTTGAAAATTTTGAAGAAATTTTTACTCTGTATTGGGTTTGAGCGAGGATTGATGATATCTGTATTTTTTTTCCTTTGTAGATCCGATTTTATTGTTTGAGGAATCGAGGGAGTGGAGCTTCCTTAATGGCGAAAGCAGCGATTAAATCTCACGCTCCGGCGCTATACTCACTCGCCGTCATTCAATTCAACGGCAGCGGTGGGTCTAAAAGCGACAAGGATCTTCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTAGGTCATGTGGACGCACTTCGCGAACTCGGCCACTGCCTTCAAGATGGTTACGGTGTGAGACAGAACTCCGACGAAGGCCGCCGCCTCCTCGTCCAAGCCAACGCCCGTGAGCTTGCTACGGTTTTACTCTCTTCCTCGAGTACATGGCAACAACAGCGACACAACCAGTCCGGCAACCTCCCTGATTTGACAGCGACTCGTTGTTCGTTGCTGAGTGATTTCGGTTGTAACGTTCCAGCACCAGAGCCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCAGCGCGTGTGGGTCTGAGACTTTGTTCGCACAGTGGATGCGGTCGGGGTGAGACTCGGCCGCACGAGTTCCGACGGTGCTCAGTTTGTGGGACAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGATTGGAAAGTCCGGCATAAAGAAGAGTGTACGACGGTGCAGCGGTGGCGGGATGAGGATGCTAACAATGCCGGCGAGATGTTTGGTATTGTTGAAGAAGAAGTTGAGGACGCCAACAATATCGTGGGTATTGTATAATCGTAACGGCGCTGTAATTTTGTCT

mRNA sequence

ATGATTTCCTCCAAGAGGCCAAGAACATGCCGTAATTTCACCGTAGATTCTGATCTATTCGATGTCTTGCCCGACGATCTCCTTATACATCTCCTCTCTCGCCTTGCCGCCTCCGCCTCCTCCCCTTCTGACCTCCTCAACCTTCTCTTGACATGTAAGAGGTTGAATCGCTTGGTTCTTAATCCTATGGTTTTGTGTAAAGCCGGACCGAAGGCGTTCGCAGTAAGAATGCGAAACTGGTCTGATTCCGCTCACCGATTTCTGAAACGCTGCGTCGATGCCGGTAATTCGGAAGCGAGTTACACGCTTGGAATGATCCGATTTTATTGTTTGAGGAATCGAGGGAGTGGAGCTTCCTTAATGGCGAAAGCAGCGATTAAATCTCACGCTCCGGCGCTATACTCACTCGCCGTCATTCAATTCAACGGCAGCGGTGGGTCTAAAAGCGACAAGGATCTTCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTAGGTCATGTGGACGCACTTCGCGAACTCGGCCACTGCCTTCAAGATGGTTACGGTGTGAGACAGAACTCCGACGAAGGCCGCCGCCTCCTCGTCCAAGCCAACGCCCGTGAGCTTGCTACGGTTTTACTCTCTTCCTCGAGTACATGGCAACAACAGCGACACAACCAGTCCGGCAACCTCCCTGATTTGACAGCGACTCGTTGTTCGTTGCTGAGTGATTTCGGTTGTAACGTTCCAGCACCAGAGCCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCAGCGCGTGTGGGTCTGAGACTTTGTTCGCACAGTGGATGCGGTCGGGGTGAGACTCGGCCGCACGAGTTCCGACGGTGCTCAGTTTGTGGGACAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGATTGGAAAGTCCGGCATAAAGAAGAGTGTACGACGGTGCAGCGGTGGCGGGATGAGGATGCTAACAATGCCGGCGAGATGTTTGGTATTGTTGAAGAAGAAGTTGAGGACGCCAACAATATCGTGGGTATTGTATAA

Coding sequence (CDS)

ATGATTTCCTCCAAGAGGCCAAGAACATGCCGTAATTTCACCGTAGATTCTGATCTATTCGATGTCTTGCCCGACGATCTCCTTATACATCTCCTCTCTCGCCTTGCCGCCTCCGCCTCCTCCCCTTCTGACCTCCTCAACCTTCTCTTGACATGTAAGAGGTTGAATCGCTTGGTTCTTAATCCTATGGTTTTGTGTAAAGCCGGACCGAAGGCGTTCGCAGTAAGAATGCGAAACTGGTCTGATTCCGCTCACCGATTTCTGAAACGCTGCGTCGATGCCGGTAATTCGGAAGCGAGTTACACGCTTGGAATGATCCGATTTTATTGTTTGAGGAATCGAGGGAGTGGAGCTTCCTTAATGGCGAAAGCAGCGATTAAATCTCACGCTCCGGCGCTATACTCACTCGCCGTCATTCAATTCAACGGCAGCGGTGGGTCTAAAAGCGACAAGGATCTTCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTAGGTCATGTGGACGCACTTCGCGAACTCGGCCACTGCCTTCAAGATGGTTACGGTGTGAGACAGAACTCCGACGAAGGCCGCCGCCTCCTCGTCCAAGCCAACGCCCGTGAGCTTGCTACGGTTTTACTCTCTTCCTCGAGTACATGGCAACAACAGCGACACAACCAGTCCGGCAACCTCCCTGATTTGACAGCGACTCGTTGTTCGTTGCTGAGTGATTTCGGTTGTAACGTTCCAGCACCAGAGCCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCAGCGCGTGTGGGTCTGAGACTTTGTTCGCACAGTGGATGCGGTCGGGGTGAGACTCGGCCGCACGAGTTCCGACGGTGCTCAGTTTGTGGGACAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGATTGGAAAGTCCGGCATAAAGAAGAGTGTACGACGGTGCAGCGGTGGCGGGATGAGGATGCTAACAATGCCGGCGAGATGTTTGGTATTGTTGAAGAAGAAGTTGAGGACGCCAACAATATCGTGGGTATTGTATAA

Protein sequence

MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVLNPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV*
Homology
[Close]
BLAST of Csa1G002030 vs. Swiss-Prot
Match: FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.9e-124
Identity = 217/326 (66.56%), Postives = 247/326 (75.77%), Query Frame = 1 

Query: 14  TVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVLNPMVLCKAGPKAF 73
           T  +DL D +PDDL+I +L +L +++  P+D +N+LLTCKRL  L +NP+VL +  PKA 
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 74  AVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPAL 133
           AV+  NWS+ +HRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 134 YSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGR 193
           YSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV QN  EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 194 RLLVQANARELATVL---LSSSSTWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPH 253
           R LVQANARELA VL   + + STW          +P+     C LLSDFGCNVPAPE H
Sbjct: 218 RFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETH 277

Query: 254 PVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVNYCSRGCQAQD 313
           P N FL +WF   G      GLRLCSH+GCGR ETR HEFRRCSVCG VNYCSR CQA D
Sbjct: 278 PANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALD 337

Query: 314 WKVRHKEECTTVQRWRDEDANNAGEM 337
           WK+RHK +C  VQRW +E     G +
Sbjct: 338 WKLRHKMDCAPVQRWLEEGDGGEGNV 363

[Close]
BLAST of Csa1G002030 vs. Swiss-Prot
Match: FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.2e-108
Identity = 204/314 (64.97%), Postives = 237/314 (75.48%), Query Frame = 1 

Query: 12  NFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVLNPMVLCKAGPK 71
           N TV++  F+ L DDL+I +L +LA SASSPSD L +L TCKRLNRL L+P+VL KAG +
Sbjct: 15  NNTVNNH-FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQ 74

Query: 72  AFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAP 131
             AV    WSDS+H+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAP
Sbjct: 75  TLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAP 134

Query: 132 ALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDE 191
           ALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++  E
Sbjct: 135 ALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSE 194

Query: 192 GRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPHP 251
           GRRLL+QANARELA  L S  S    +  +++  L DL+             VP  E HP
Sbjct: 195 GRRLLIQANARELACSLRSYLSL---KSGDENETLTDLSV------------VPVQEIHP 254

Query: 252 VNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVNYCSRGCQAQDW 311
           VN FL+EWF S G V    GLR+CSH GCGR ETR HEFRRCSVCG VNYCSRGCQA DW
Sbjct: 255 VNRFLKEWF-SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDW 311

Query: 312 KVRHKEECTTVQRW 326
           + +HK ECT +  W
Sbjct: 315 RAKHKVECTPLDLW 311

[Close]
BLAST of Csa1G002030 vs. Swiss-Prot
Match: FB79_ARATH (Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.1e-06
Identity = 38/128 (29.69%), Postives = 59/128 (46.09%), Query Frame = 1 

Query: 21  DVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVLNPMVLCKAGPKAFAVRMRNW 80
           D LP+DLL+ + S     ASS S + NL L  K   R+     V  +   K   +    W
Sbjct: 25  DSLPEDLLVEISS--CTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKE--IEFLPW 84

Query: 81  SDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQ 140
            +++ +F++RC ++ N EA +  G I ++  + +  G   +A+AA K    A Y   VI 
Sbjct: 85  HENSAKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 144

Query: 141 FNGSGGSK 149
               G +K
Sbjct: 145 ICLGGKTK 148

[Close]
BLAST of Csa1G002030 vs. TrEMBL
Match: A0A0A0LNX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002030 PE=4 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 1.3e-205
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV 355
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV 354

[Close]
BLAST of Csa1G002030 vs. TrEMBL
Match: A0A0D2RJ28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G206200 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 4.0e-133
Identity = 242/353 (68.56%), Postives = 278/353 (78.75%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           M+  K+ R  R FT  SDLFD LP+DL+I +LS+LA+SASSPSD +N+L+TCKRLNRL L
Sbjct: 1   MLQRKKQRISRKFTDKSDLFDGLPEDLVISILSKLASSASSPSDFINILVTCKRLNRLAL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAG KA AV+ RNW DSAH FLK C++AGN EA YTLGMI+FYCL+NRGSGASL
Sbjct: 61  HPLVLSKAGSKALAVKARNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           +AKAAIKSHAPALYSL VIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 LAKAAIKSHAPALYSLGVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLT---ATRCSLL 240
           DGYGVRQ+  EGRRLL++ANARELA+ L +      QQ+H +  N    +    + C LL
Sbjct: 181 DGYGVRQHIAEGRRLLIRANARELASSLNALVKRKPQQQHQRRLNYQHYSFKAGSGCPLL 240

Query: 241 SDFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCG 300
           SDFGCNVPAPE HPVN+F +EWFES G  A   GLRLCSH GCGR ETR HEFRRCSVCG
Sbjct: 241 SDFGCNVPAPEVHPVNVFSKEWFES-GRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCG 300

Query: 301 TVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDAN-------NAGEMFGIVEEE 344
           TVNYCSRGCQA DWK+RHK EC  ++RW +E  N         GEM  +VE E
Sbjct: 301 TVNYCSRGCQALDWKLRHKAECGPIERWLEEGGNGDDGGHGGVGEMEEVVEAE 352

[Close]
BLAST of Csa1G002030 vs. TrEMBL
Match: A0A0B0PKV7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02830 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 4.0e-133
Identity = 243/353 (68.84%), Postives = 277/353 (78.47%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           M+  K+ R  R FT  SDLFD LP+DL+I +LS+LA SASSPSD +N+L+TCKRLNRL L
Sbjct: 1   MLQRKKQRISRKFTDKSDLFDGLPEDLVISILSKLAYSASSPSDFINILVTCKRLNRLAL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAG KA AV+  NW DSAH FLK C++AGN EA YTLGMI+FYCL+NRGSGASL
Sbjct: 61  HPLVLSKAGSKALAVKAGNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           +AKAAIKSHAPALYSL VIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 LAKAAIKSHAPALYSLGVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLT---ATRCSLL 240
           DGYGVRQ+  EGRRLL+QANARELA+ L +      QQ+H +  N    +    + C LL
Sbjct: 181 DGYGVRQHIAEGRRLLIQANARELASSLNALVKRKAQQQHQRRLNYQHYSFKAGSGCPLL 240

Query: 241 SDFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCG 300
           SDFGCNVPAPE HPVN+FL+EWFES G  A   GLRLCSH GCGR ETR HEFRRCSVCG
Sbjct: 241 SDFGCNVPAPEVHPVNVFLKEWFES-GRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCG 300

Query: 301 TVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDAN-------NAGEMFGIVEEE 344
           TVNYCSRGCQA DWK+RHK EC  ++RW +E  N         GEM  +VE E
Sbjct: 301 TVNYCSRGCQALDWKLRHKAECGPIERWLEEGGNGNDGGHGGVGEMEEVVEAE 352

[Close]
BLAST of Csa1G002030 vs. TrEMBL
Match: A0A061FZI2_THECC (HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao GN=TCM_014641 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 2.6e-132
Identity = 241/355 (67.89%), Postives = 283/355 (79.72%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           M+  K+ RT R  T  SDLFD +PDDL++ +L +L++S S P+D +N+LLTCKRLNRL L
Sbjct: 1   MLQKKKQRTTRKITDKSDLFDGVPDDLVVSILCKLSSSVSCPTDFVNILLTCKRLNRLGL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAG KA AV+ +NWSDSAHRFLK CV AGN EA YTLGMIRFYCL+NRGSGASL
Sbjct: 61  HPLVLSKAGSKALAVKAKNWSDSAHRFLKHCVSAGNIEACYTLGMIRFYCLQNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAA+KSHAPALYSLAVIQFNGSGGSK++KDL+AGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAMKSHAPALYSLAVIQFNGSGGSKNNKDLRAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPD---LTATRCSLL 240
           DGYGVRQN  EGRRLL+QANARELA+ L +      +Q+H +  N      +T + C LL
Sbjct: 181 DGYGVRQNITEGRRLLIQANARELASSLNTVVKRQLKQQHQRRLNYQHYAYMTGSGCPLL 240

Query: 241 SDFGCNVPAPEPHPVNLFLREWFESE-GEVAARVGLRLCSHSGCGRGETRPHEFRRCSVC 300
           SDFGCNVP PE HPV++FL+EWFES  GE+    GLRLCSH GCGR ETR HEFRRCSVC
Sbjct: 241 SDFGCNVPVPEGHPVHVFLKEWFESGLGELGQ--GLRLCSHKGCGRPETRAHEFRRCSVC 300

Query: 301 GTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDAN-NAGEMFGIVEEEVEDANNI 351
           GTVNYCSRGCQA DWK+RHK EC  ++RW++E  N N G+      EEV +A ++
Sbjct: 301 GTVNYCSRGCQALDWKLRHKVECGPMERWQEEGGNGNGGDGGAGGMEEVGEAEDL 353

[Close]
BLAST of Csa1G002030 vs. TrEMBL
Match: B9RAG1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506210 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131
Identity = 241/350 (68.86%), Postives = 272/350 (77.71%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           M   KR +T R     SDLFD LPDD+++ +LS+L++SAS PSD +N+L TCKRLNRL L
Sbjct: 1   MYQRKRQKTSRRTPEKSDLFDELPDDIVVCILSKLSSSASCPSDFINILFTCKRLNRLAL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
            P+VL KAGP+ FAV+ +NWSDSAHRFLK C++AGN+EASYTLGMIRFYCL+NRG GASL
Sbjct: 61  QPVVLSKAGPQTFAVKAKNWSDSAHRFLKLCINAGNTEASYTLGMIRFYCLQNRGVGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAV+QFNGSGGSK DKDL+AGV+LCARAA LGH+DALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVMQFNGSGGSKIDKDLRAGVSLCARAAVLGHIDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQ--QQRHNQSGNLPDLTATRCSLLS 240
           DGYGV QN  EGRRLLVQANARELA+  L S  TWQ   Q H Q  +   + +  C LLS
Sbjct: 181 DGYGVAQNIAEGRRLLVQANARELAS-SLRSMLTWQPHNQHHRQYASCEVMESAGCPLLS 240

Query: 241 DFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGT 300
           DFGCNVPA E HP N FL EWFES G      GLRLCSHSGCGR ETRPHEFRRCSVCGT
Sbjct: 241 DFGCNVPAREVHPANRFLSEWFES-GRGLLGPGLRLCSHSGCGRPETRPHEFRRCSVCGT 300

Query: 301 VNYCSRGCQAQDWKVRHKEECTTVQRW----RDEDANNAGEMFGIVEEEV 345
           VNYCSRGCQA DWK+RHK EC  +++W     D   N  G M  I E E+
Sbjct: 301 VNYCSRGCQALDWKLRHKMECVPLEQWLVVEDDGHDNEIGAMVEIEEREI 348

[Close]
BLAST of Csa1G002030 vs. TAIR10
Match: AT1G67340.1 (AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-125
Identity = 217/326 (66.56%), Postives = 247/326 (75.77%), Query Frame = 1 

Query: 14  TVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVLNPMVLCKAGPKAF 73
           T  +DL D +PDDL+I +L +L +++  P+D +N+LLTCKRL  L +NP+VL +  PKA 
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 74  AVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPAL 133
           AV+  NWS+ +HRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 134 YSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGR 193
           YSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV QN  EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 194 RLLVQANARELATVL---LSSSSTWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPH 253
           R LVQANARELA VL   + + STW          +P+     C LLSDFGCNVPAPE H
Sbjct: 218 RFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETH 277

Query: 254 PVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVNYCSRGCQAQD 313
           P N FL +WF   G      GLRLCSH+GCGR ETR HEFRRCSVCG VNYCSR CQA D
Sbjct: 278 PANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALD 337

Query: 314 WKVRHKEECTTVQRWRDEDANNAGEM 337
           WK+RHK +C  VQRW +E     G +
Sbjct: 338 WKLRHKMDCAPVQRWLEEGDGGEGNV 363

[Close]
BLAST of Csa1G002030 vs. TAIR10
Match: AT5G50450.1 (AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-109
Identity = 204/314 (64.97%), Postives = 237/314 (75.48%), Query Frame = 1 

Query: 12  NFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVLNPMVLCKAGPK 71
           N TV++  F+ L DDL+I +L +LA SASSPSD L +L TCKRLNRL L+P+VL KAG +
Sbjct: 15  NNTVNNH-FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQ 74

Query: 72  AFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAP 131
             AV    WSDS+H+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAP
Sbjct: 75  TLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAP 134

Query: 132 ALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDE 191
           ALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++  E
Sbjct: 135 ALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSE 194

Query: 192 GRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPHP 251
           GRRLL+QANARELA  L S  S    +  +++  L DL+             VP  E HP
Sbjct: 195 GRRLLIQANARELACSLRSYLSL---KSGDENETLTDLSV------------VPVQEIHP 254

Query: 252 VNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVNYCSRGCQAQDW 311
           VN FL+EWF S G V    GLR+CSH GCGR ETR HEFRRCSVCG VNYCSRGCQA DW
Sbjct: 255 VNRFLKEWF-SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDW 311

Query: 312 KVRHKEECTTVQRW 326
           + +HK ECT +  W
Sbjct: 315 RAKHKVECTPLDLW 311

[Close]
BLAST of Csa1G002030 vs. TAIR10
Match: AT1G67623.1 (AT1G67623.1 F-box family protein)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-07
Identity = 38/128 (29.69%), Postives = 59/128 (46.09%), Query Frame = 1 

Query: 21  DVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVLNPMVLCKAGPKAFAVRMRNW 80
           D LP+DLL+ + S     ASS S + NL L  K   R+     V  +   K   +    W
Sbjct: 25  DSLPEDLLVEISS--CTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKE--IEFLPW 84

Query: 81  SDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQ 140
            +++ +F++RC ++ N EA +  G I ++  + +  G   +A+AA K    A Y   VI 
Sbjct: 85  HENSAKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 144

Query: 141 FNGSGGSK 149
               G +K
Sbjct: 145 ICLGGKTK 148

[Close]
BLAST of Csa1G002030 vs. NCBI nr
Match: gi|449440552|ref|XP_004138048.1| (PREDICTED: F-box protein At1g67340-like [Cucumis sativus])

HSP 1 Score: 723.4 bits (1866), Expect = 1.9e-205
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV 355
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV 354

[Close]
BLAST of Csa1G002030 vs. NCBI nr
Match: gi|659128906|ref|XP_008464430.1| (PREDICTED: F-box protein At1g67340-like [Cucumis melo])

HSP 1 Score: 682.9 bits (1761), Expect = 2.9e-193
Identity = 338/354 (95.48%), Postives = 342/354 (96.61%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           MIS KRPRT RNFT DSDLFDVLPDDLLIHLL  LAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAGPKAFAVRM+NW DS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSS WQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAAR GLRLCSHSGCGR ETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV 355
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMF IV EEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIV-EEVEDANNIVGIV 353

[Close]
BLAST of Csa1G002030 vs. NCBI nr
Match: gi|823212501|ref|XP_012439000.1| (PREDICTED: F-box protein At5g50450-like [Gossypium raimondii])

HSP 1 Score: 482.6 bits (1241), Expect = 5.7e-133
Identity = 242/353 (68.56%), Postives = 278/353 (78.75%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           M+  K+ R  R FT  SDLFD LP+DL+I +LS+LA+SASSPSD +N+L+TCKRLNRL L
Sbjct: 1   MLQRKKQRISRKFTDKSDLFDGLPEDLVISILSKLASSASSPSDFINILVTCKRLNRLAL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAG KA AV+ RNW DSAH FLK C++AGN EA YTLGMI+FYCL+NRGSGASL
Sbjct: 61  HPLVLSKAGSKALAVKARNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           +AKAAIKSHAPALYSL VIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 LAKAAIKSHAPALYSLGVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLT---ATRCSLL 240
           DGYGVRQ+  EGRRLL++ANARELA+ L +      QQ+H +  N    +    + C LL
Sbjct: 181 DGYGVRQHIAEGRRLLIRANARELASSLNALVKRKPQQQHQRRLNYQHYSFKAGSGCPLL 240

Query: 241 SDFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCG 300
           SDFGCNVPAPE HPVN+F +EWFES G  A   GLRLCSH GCGR ETR HEFRRCSVCG
Sbjct: 241 SDFGCNVPAPEVHPVNVFSKEWFES-GRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCG 300

Query: 301 TVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDAN-------NAGEMFGIVEEE 344
           TVNYCSRGCQA DWK+RHK EC  ++RW +E  N         GEM  +VE E
Sbjct: 301 TVNYCSRGCQALDWKLRHKAECGPIERWLEEGGNGDDGGHGGVGEMEEVVEAE 352

[Close]
BLAST of Csa1G002030 vs. NCBI nr
Match: gi|728846084|gb|KHG25527.1| (hypothetical protein F383_02830 [Gossypium arboreum])

HSP 1 Score: 482.6 bits (1241), Expect = 5.7e-133
Identity = 243/353 (68.84%), Postives = 277/353 (78.47%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           M+  K+ R  R FT  SDLFD LP+DL+I +LS+LA SASSPSD +N+L+TCKRLNRL L
Sbjct: 1   MLQRKKQRISRKFTDKSDLFDGLPEDLVISILSKLAYSASSPSDFINILVTCKRLNRLAL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAG KA AV+  NW DSAH FLK C++AGN EA YTLGMI+FYCL+NRGSGASL
Sbjct: 61  HPLVLSKAGSKALAVKAGNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           +AKAAIKSHAPALYSL VIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 LAKAAIKSHAPALYSLGVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLT---ATRCSLL 240
           DGYGVRQ+  EGRRLL+QANARELA+ L +      QQ+H +  N    +    + C LL
Sbjct: 181 DGYGVRQHIAEGRRLLIQANARELASSLNALVKRKAQQQHQRRLNYQHYSFKAGSGCPLL 240

Query: 241 SDFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCG 300
           SDFGCNVPAPE HPVN+FL+EWFES G  A   GLRLCSH GCGR ETR HEFRRCSVCG
Sbjct: 241 SDFGCNVPAPEVHPVNVFLKEWFES-GRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCG 300

Query: 301 TVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDAN-------NAGEMFGIVEEE 344
           TVNYCSRGCQA DWK+RHK EC  ++RW +E  N         GEM  +VE E
Sbjct: 301 TVNYCSRGCQALDWKLRHKAECGPIERWLEEGGNGNDGGHGGVGEMEEVVEAE 352

[Close]
BLAST of Csa1G002030 vs. NCBI nr
Match: gi|590670176|ref|XP_007037982.1| (HCP-like superfamily protein with MYND-type zinc finger [Theobroma cacao])

HSP 1 Score: 479.9 bits (1234), Expect = 3.7e-132
Identity = 241/355 (67.89%), Postives = 283/355 (79.72%), Query Frame = 1 

Query: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60
           M+  K+ RT R  T  SDLFD +PDDL++ +L +L++S S P+D +N+LLTCKRLNRL L
Sbjct: 1   MLQKKKQRTTRKITDKSDLFDGVPDDLVVSILCKLSSSVSCPTDFVNILLTCKRLNRLGL 60

Query: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAG KA AV+ +NWSDSAHRFLK CV AGN EA YTLGMIRFYCL+NRGSGASL
Sbjct: 61  HPLVLSKAGSKALAVKAKNWSDSAHRFLKHCVSAGNIEACYTLGMIRFYCLQNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAA+KSHAPALYSLAVIQFNGSGGSK++KDL+AGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAMKSHAPALYSLAVIQFNGSGGSKNNKDLRAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPD---LTATRCSLL 240
           DGYGVRQN  EGRRLL+QANARELA+ L +      +Q+H +  N      +T + C LL
Sbjct: 181 DGYGVRQNITEGRRLLIQANARELASSLNTVVKRQLKQQHQRRLNYQHYAYMTGSGCPLL 240

Query: 241 SDFGCNVPAPEPHPVNLFLREWFESE-GEVAARVGLRLCSHSGCGRGETRPHEFRRCSVC 300
           SDFGCNVP PE HPV++FL+EWFES  GE+    GLRLCSH GCGR ETR HEFRRCSVC
Sbjct: 241 SDFGCNVPVPEGHPVHVFLKEWFESGLGELGQ--GLRLCSHKGCGRPETRAHEFRRCSVC 300

Query: 301 GTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDAN-NAGEMFGIVEEEVEDANNI 351
           GTVNYCSRGCQA DWK+RHK EC  ++RW++E  N N G+      EEV +A ++
Sbjct: 301 GTVNYCSRGCQALDWKLRHKVECGPMERWQEEGGNGNGGDGGAGGMEEVGEAEDL 353

The following BLAST results are available for this feature:
BLAST of Csa1G002030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB76_ARATH2.9e-12466.56F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1[more]
FB342_ARATH2.2e-10864.97F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1[more]
FB79_ARATH4.1e-0629.69Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1[more]
BLAST of Csa1G002030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNX1_CUCSA1.3e-205100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002030 PE=4 SV=1[more]
A0A0D2RJ28_GOSRA4.0e-13368.56Uncharacterized protein OS=Gossypium raimondii GN=B456_008G206200 PE=4 SV=1[more]
A0A0B0PKV7_GOSAR4.0e-13368.84Uncharacterized protein OS=Gossypium arboreum GN=F383_02830 PE=4 SV=1[more]
A0A061FZI2_THECC2.6e-13267.89HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao GN=TC... [more]
B9RAG1_RICCO1.3e-13168.86Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506210 PE=4 SV=1[more]
BLAST of Csa1G002030 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67340.11.6e-12566.56 HCP-like superfamily protein with MYND-type zinc finger[more]
AT5G50450.11.2e-10964.97 HCP-like superfamily protein with MYND-type zinc finger[more]
AT1G67623.12.3e-0729.69 F-box family protein[more]
BLAST of Csa1G002030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440552|ref|XP_004138048.1|1.9e-205100.00PREDICTED: F-box protein At1g67340-like [Cucumis sativus][more]
gi|659128906|ref|XP_008464430.1|2.9e-19395.48PREDICTED: F-box protein At1g67340-like [Cucumis melo][more]
gi|823212501|ref|XP_012439000.1|5.7e-13368.56PREDICTED: F-box protein At5g50450-like [Gossypium raimondii][more]
gi|728846084|gb|KHG25527.1|5.7e-13368.84hypothetical protein F383_02830 [Gossypium arboreum][more]
gi|590670176|ref|XP_007037982.1|3.7e-13267.89HCP-like superfamily protein with MYND-type zinc finger [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR002893Znf_MYND
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU115303cucumber EST collection version 3.0transcribed_cluster
CU131803cucumber EST collection version 3.0transcribed_cluster
CU176090cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G002030.1Csa1G002030.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU131803CU131803transcribed_cluster
CU115303CU115303transcribed_cluster
CU176090CU176090transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 22..62
score: 1.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 14..74
score: 1.3
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 280..319
score: 1.
IPR002893Zinc finger, MYND-typePROFILEPS50865ZF_MYND_2coord: 277..319
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 82..207
score: 1.3
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 16..63
score: 4.
NoneNo IPR availablePANTHERPTHR12298PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDcoord: 11..337
score: 3.3E
NoneNo IPR availablePANTHERPTHR12298:SF7SUBFAMILY NOT NAMEDcoord: 11..337
score: 3.3E
NoneNo IPR availableunknownSSF144232HIT/MYND zinc finger-likecoord: 273..324
score: 4.53
NoneNo IPR availableunknownSSF81901HCP-likecoord: 74..199
score: 3.66

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G002030Cla019275Watermelon (97103) v1cuwmB094
Csa1G002030Cla002619Watermelon (97103) v1cuwmB028
Csa1G002030MELO3C026207Melon (DHL92) v3.5.1cumeB054
Csa1G002030MELO3C002360Melon (DHL92) v3.5.1cumeB022
Csa1G002030ClCG06G017880Watermelon (Charleston Gray)cuwcgB081
Csa1G002030ClCG03G003750Watermelon (Charleston Gray)cuwcgB052
Csa1G002030Lsi02G005030Bottle gourd (USVL1VR-Ls)culsiB041
Csa1G002030Lsi06G016410Bottle gourd (USVL1VR-Ls)culsiB070
Csa1G002030MELO3C002360.2Melon (DHL92) v3.6.1cumedB018
Csa1G002030MELO3C026207.2Melon (DHL92) v3.6.1cumedB046
Csa1G002030Cla97C03G054890Watermelon (97103) v2cuwmbB050
Csa1G002030Cla97C06G127620Watermelon (97103) v2cuwmbB078
Csa1G002030Bhi08G001227Wax gourdcuwgoB061
Csa1G002030CSPI01G00540Wild cucumber (PI 183967)cpicuB000
Csa1G002030CSPI01G09530Wild cucumber (PI 183967)cpicuB010
Csa1G002030Cucsa.157340Cucumber (Gy14) v1cgycuB224
Csa1G002030CmaCh13G008040Cucurbita maxima (Rimu)cmacuB225
Csa1G002030CmaCh10G000620Cucurbita maxima (Rimu)cmacuB048
Csa1G002030CmoCh10G000560Cucurbita moschata (Rifu)cmocuB037
Csa1G002030CmoCh18G002180Cucurbita moschata (Rifu)cmocuB393
Csa1G002030CmoCh13G008360Cucurbita moschata (Rifu)cmocuB211
Csa1G002030Cp4.1LG18g09180Cucurbita pepo (Zucchini)cpecuB361
Csa1G002030Cp4.1LG20g03040Cucurbita pepo (Zucchini)cpecuB513
Csa1G002030CsGy1G009560Cucumber (Gy14) v2cgybcuB014
Csa1G002030CsGy1G000550Cucumber (Gy14) v2cgybcuB001
Csa1G002030Carg10281Silver-seed gourdcarcuB0391
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa1G002030Csa1G050480Cucumber (Chinese Long) v2cucuB002
The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G002030Cucumber (Gy14) v2cgybcuB096
Csa1G002030Silver-seed gourdcarcuB1062
Csa1G002030Watermelon (97103) v2cuwmbB063
Csa1G002030Wax gourdcuwgoB079
Csa1G002030Cucumber (Chinese Long) v2cucuB014
Csa1G002030Cucurbita maxima (Rimu)cmacuB086
Csa1G002030Cucurbita moschata (Rifu)cmocuB076
Csa1G002030Melon (DHL92) v3.5.1cumeB078
Csa1G002030Watermelon (Charleston Gray)cuwcgB065
Csa1G002030Cucurbita pepo (Zucchini)cpecuB653