CU131803 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU131803
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 303232 .. 303591 (+)
Sequence length255
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGACCAAGAGAACGTCCGTCCGTACCACACTCCTAAATCTCTACTCTCAACGCATAGTAATCCCCAAACTCTTACAACAATGATTTCCTCCAAGAGGCCAAGAACATGCCGTAATTTCACCGTAGATTCTGATCTATTCGATGTCTTGCCCGACGATCTCCTTATACATCTCCTCTCTCGCCTTGCCGCCTCCGCCTCCTCCCCTCCTGACCTCCTCAACCTTCTCTTGACATGTAAGAGGTTGAATC
Library
Library categoryESTs
fruit (8DPP) library1
Homology
The following BLAST results are available for this feature:
BLAST of CU131803 vs. NCBI nr
Match NameE-valueIdentityDescription
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G002030Csa1G002030gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02NVB5SFKNP3UI02NVB5SEST


InterPro
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 43..85
score: 1.1
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 45..85
score: 5.
NoneNo IPR availablePANTHERPTHR12298PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDcoord: 40..85
score: 6.0
NoneNo IPR availablePANTHERPTHR12298:SF7SUBFAMILY NOT NAMEDcoord: 40..85
score: 6.0