Cp4.1LG09g09610 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g09610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	HCP family protein with MYND-type zinc finger protein
Location	Cp4.1LG09 : 8586406 .. 8588122 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGACTGGCTCGAACCGTGGGACCCATCTAAATCTGTCTGGACACTTCCCCACCGTTGCTGGTTCGCTAGAGATATAAATTTAACGCACCCGATTCATTTTGAGATCACTTCATGCTCTAACTACGATCCAAATCTGGCTTCCATTAATCCTCCATTAACGGACCTCAATCGCTTGCAGTCCTTTCATGACGGTTCCATTTTCAAGGTGAAGGCCACAACGACGAACAATCTATTACACTCTGGAATGGTGTGCAACAAAAGAAGGAGAACTTCGACCACCACCGCCGCCGGGATTCATGATCTCTTCGACGATTTGCCGGATGATTTACTCGTCCTCCTCCTCGGCAAACTTAGCGCCAACGCTTCTTCTCCTTCAGATCTCGTCAATGTTATGTTGACGTAAGAATCGCGTAACTTGTGGTTTCTTTAATTTCTGTTTCTGTTGTGATTTTCATTTGATGTTCGTGAGACGAATCATAGATGTAAGAGGTTCAATCGATTGGCTCTGCATCCGATGGTGCTATCGAAAGCCGGACCTAAAGCATTTGAAATCCGAATTAAAAACTGGTGCGAATCGACTCATCGATTCCTGAAATTGTGCGTTTCTGCCGGTAATGTTGAAGCGTGCTACACGCTAGGAATGGTCCGTATAATCGATTGATTTTTCTCTCTCTGTAATTTCAGATTCGGTTATGATTTGTTTGCTGATTTCGTTTTTTGTAGGTCGAATTTTATTGTATGAAGAACAGAGGAAATGGAGCTTCGTTAATGGCGAAGGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCACTCGCAATCGTACAGTTTAATGGAAGCGGTGGTTCAAAGAGCGACAAGAATCTTCGTGCAGGTGTAGCTTTGTGCGGACGAGCCGCTTGTCTCGGTCATATCGATGCGCTTCGCGAACTAGGTCACTGTCTTCAAGACGGTTACGGCGTCGCTCAAAACGCGTCCGAGGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAGCTCGCGTCGATAACAAACTCCTCTCTCCGCCGTCTCAACTGCTCCGTCGACCGCCCTACCACGACGGATTCCAGCGGATCGCTTCTTAGTGATTTCGGCTACAACATTCCGGCGCCGGAGGTTCATCCGGCGAATCAATTTTTAAGAGATTGGTTCACTTCTGGCCGTGGATTTATCGCTGAAGGTTTGAGACTCTGCTCGAATAGTGGCTGTGGAAGGCCAGAGACTCGGCTTCATGAGTTCCGGCGGTGCTCGGTTTGTGGTAATGTAAACTATTGCTCACGAGGTTGCCAAGCTCTGGACTGGAAATTGCAACACAAGACGGAATGTGCGCCGTTTGACCGGTGGCTGATCGAGGACGATGACCTCGAAGACGACGACGACGACGGCGTAAACAGAATAGAGCAGTTCGGAGACGGTGTGAATGTGGAAACTGAATGATATTTGATTATTAAAGGCAAAGCTTTCTCTTGTTGTTTGACATCACTTTTACCTTTTTAAAATTCTTTTTATTTTATTTTATTTTATTTTTTACTTCCTCCTCTTTTTAACATGAATATCCGACGTGGAAAAGATTAAAATATTTTACAATCACAAAAATTACTCTTCTCATTCAAATCACTATATTTTAATATTCCAAACTTGAAAATTATTTAAAATATAAAATATTATATAAATCTTCAACTTAAATGTATACT

mRNA sequence

GCTGACTGGCTCGAACCGTGGGACCCATCTAAATCTGTCTGGACACTTCCCCACCGTTGCTGGTTCGCTAGAGATATAAATTTAACGCACCCGATTCATTTTGAGATCACTTCATGCTCTAACTACGATCCAAATCTGGCTTCCATTAATCCTCCATTAACGGACCTCAATCGCTTGCAGTCCTTTCATGACGGTTCCATTTTCAAGGTGAAGGCCACAACGACGAACAATCTATTACACTCTGGAATGGTGTGCAACAAAAGAAGGAGAACTTCGACCACCACCGCCGCCGGGATTCATGATCTCTTCGACGATTTGCCGGATGATTTACTCGTCCTCCTCCTCGGCAAACTTAGCGCCAACGCTTCTTCTCCTTCAGATCTCGTCAATGTTATGTTGACATGTAAGAGGTTCAATCGATTGGCTCTGCATCCGATGGTGCTATCGAAAGCCGGACCTAAAGCATTTGAAATCCGAATTAAAAACTGGTGCGAATCGACTCATCGATTCCTGAAATTGTGCGTTTCTGCCGGTAATGTTGAAGCGTGCTACACGCTAGGAATGGTCGAATTTTATTGTATGAAGAACAGAGGAAATGGAGCTTCGTTAATGGCGAAGGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCACTCGCAATCGTACAGTTTAATGGAAGCGGTGGTTCAAAGAGCGACAAGAATCTTCGTGCAGGTGTAGCTTTGTGCGGACGAGCCGCTTGTCTCGGTCATATCGATGCGCTTCGCGAACTAGGTCACTGTCTTCAAGACGGTTACGGCGTCGCTCAAAACGCGTCCGAGGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAGCTCGCGTCGATAACAAACTCCTCTCTCCGCCGTCTCAACTGCTCCGTCGACCGCCCTACCACGACGGATTCCAGCGGATCGCTTCTTAGTGATTTCGGCTACAACATTCCGGCGCCGGAGGTTCATCCGGCGAATCAATTTTTAAGAGATTGGTTCACTTCTGGCCGTGGATTTATCGCTGAAGGTTTGAGACTCTGCTCGAATAGTGGCTGTGGAAGGCCAGAGACTCGGCTTCATGAGTTCCGGCGGTGCTCGGTTTGTGGTAATGTAAACTATTGCTCACGAGGTTGCCAAGCTCTGGACTGGAAATTGCAACACAAGACGGAATGTGCGCCGTTTGACCGGTGGCTGATCGAGGACGATGACCTCGAAGACGACGACGACGACGGCGTAAACAGAATAGAGCAGTTCGGAGACGGTGTGAATGTGGAAACTGAATGATATTTGATTATTAAAGGCAAAGCTTTCTCTTGTTGTTTGACATCACTTTTACCTTTTTAAAATTCTTTTTATTTTATTTTATTTTATTTTTTACTTCCTCCTCTTTTTAACATGAATATCCGACGTGGAAAAGATTAAAATATTTTACAATCACAAAAATTACTCTTCTCATTCAAATCACTATATTTTAATATTCCAAACTTGAAAATTATTTAAAATATAAAATATTATATAAATCTTCAACTTAAATGTATACT

Coding sequence (CDS)

GCTGACTGGCTCGAACCGTGGGACCCATCTAAATCTGTCTGGACACTTCCCCACCGTTGCTGGTTCGCTAGAGATATAAATTTAACGCACCCGATTCATTTTGAGATCACTTCATGCTCTAACTACGATCCAAATCTGGCTTCCATTAATCCTCCATTAACGGACCTCAATCGCTTGCAGTCCTTTCATGACGGTTCCATTTTCAAGGTGAAGGCCACAACGACGAACAATCTATTACACTCTGGAATGGTGTGCAACAAAAGAAGGAGAACTTCGACCACCACCGCCGCCGGGATTCATGATCTCTTCGACGATTTGCCGGATGATTTACTCGTCCTCCTCCTCGGCAAACTTAGCGCCAACGCTTCTTCTCCTTCAGATCTCGTCAATGTTATGTTGACATGTAAGAGGTTCAATCGATTGGCTCTGCATCCGATGGTGCTATCGAAAGCCGGACCTAAAGCATTTGAAATCCGAATTAAAAACTGGTGCGAATCGACTCATCGATTCCTGAAATTGTGCGTTTCTGCCGGTAATGTTGAAGCGTGCTACACGCTAGGAATGGTCGAATTTTATTGTATGAAGAACAGAGGAAATGGAGCTTCGTTAATGGCGAAGGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCACTCGCAATCGTACAGTTTAATGGAAGCGGTGGTTCAAAGAGCGACAAGAATCTTCGTGCAGGTGTAGCTTTGTGCGGACGAGCCGCTTGTCTCGGTCATATCGATGCGCTTCGCGAACTAGGTCACTGTCTTCAAGACGGTTACGGCGTCGCTCAAAACGCGTCCGAGGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAGCTCGCGTCGATAACAAACTCCTCTCTCCGCCGTCTCAACTGCTCCGTCGACCGCCCTACCACGACGGATTCCAGCGGATCGCTTCTTAGTGATTTCGGCTACAACATTCCGGCGCCGGAGGTTCATCCGGCGAATCAATTTTTAAGAGATTGGTTCACTTCTGGCCGTGGATTTATCGCTGAAGGTTTGAGACTCTGCTCGAATAGTGGCTGTGGAAGGCCAGAGACTCGGCTTCATGAGTTCCGGCGGTGCTCGGTTTGTGGTAATGTAAACTATTGCTCACGAGGTTGCCAAGCTCTGGACTGGAAATTGCAACACAAGACGGAATGTGCGCCGTTTGACCGGTGGCTGATCGAGGACGATGACCTCGAAGACGACGACGACGACGGCGTAAACAGAATAGAGCAGTTCGGAGACGGTGTGAATGTGGAAACTGAATGA

Protein sequence

ADWLEPWDPSKSVWTLPHRCWFARDINLTHPIHFEITSCSNYDPNLASINPPLTDLNRLQSFHDGSIFKVKATTTNNLLHSGMVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDGYGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPTTTDSSGSLLSDFGYNIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDGVNRIEQFGDGVNVETE

Homology

[Close]

BLAST of Cp4.1LG09g09610 vs. Swiss-Prot
Match: FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 6.3e-118
Identity = 209/338 (61.83%), Postives = 255/338 (75.44%), Query Frame = 1


Query: 101 DLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHPMVLSKAGPKAFEIRI 160
           DL D +PDDL++ +L KL + +  P+D +NV+LTCKR   LA++P+VLS+  PKA  ++ 
Sbjct: 42  DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKA 101

Query: 161 KNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMAKAAIKSHPLALYSLA 220
            NW E +HRFLK CV AG++EACYTLGM+ FYC++NRGNGASLMAKAAI SH  ALYSLA
Sbjct: 102 HNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLA 161

Query: 221 IVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDGYGVAQNASEGRRLLI 280
           ++QFNGSGGSK+DK+LRAGVALC RAA LGH+DALRELGHCLQDGYGV QN SEGRR L+
Sbjct: 162 VIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLV 221

Query: 281 EANARELASITNSSLRR----LNCSVDRPTTTDSSGS----LLSDFGYNIPAPEVHPANQ 340
           +ANARELA++ +S ++     L+ S   P    + G     LLSDFG N+PAPE HPAN+
Sbjct: 222 QANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANR 281

Query: 341 FLRDWF-TSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLQ 400
           FL DWF   G     +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL+
Sbjct: 282 FLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLR 341

Query: 401 HKTECAPFDRWLIEDDDLEDDDDDGVNRIEQFGDGVNV 430
           HK +CAP  RWL      E D  +G  +I+  G+G NV
Sbjct: 342 HKMDCAPVQRWL-----EEGDGGEGNVQIDGNGNGDNV 374

[Close]

BLAST of Cp4.1LG09g09610 vs. Swiss-Prot
Match: FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.8e-113
Identity = 196/329 (59.57%), Postives = 249/329 (75.68%), Query Frame = 1


Query: 86  NKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHP 145
           NK++R        +++ F+DL DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 146 MVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMA 205
           +VLSKAG +   +  + W +S+H+FLKLCV+AGN++A Y+LGM+ FYC++N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 206 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDG 265
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+A LGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 266 YGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPTTTDSSGSLLSDFGYNIPAP 325
           YGV ++ SEGRRLLI+ANARELA    S L  L    +  T TD S          +P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELACSLRSYL-SLKSGDENETLTDLS---------VVPVQ 244

Query: 326 EVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 385
           E+HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 386 LDWKLQHKTECAPFDRWLIEDDDLEDDDD 415
           LDW+ +HK EC P D W+    ++ DD +
Sbjct: 305 LDWRAKHKVECTPLDLWVAAAAEIGDDGE 323

[Close]

BLAST of Cp4.1LG09g09610 vs. TrEMBL
Match: A0A0A0LTV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 4.7e-176
Identity = 307/351 (87.46%), Postives = 323/351 (92.02%), Query Frame = 1


Query: 83  MVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLA 142
           M+CNKRRRTST+ A GI DLFD LPDDL+V++LGKLSA ASSP DLVNVM+TCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 143 LHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGAS 202
           LHP+VLSKAGPKAFEI+ KNW ESTHRFLKLCVSAGNVEACYTLGM+EFYC+KNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 203 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCL 262
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 263 QDGYGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPTTTDSSGSLLSDFGYNI 322
           QDGYGV QN SEGRRLLIEANARELA ITNSSLRRL+CS  R + TDS GSLLSDFG N 
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 323 PAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 382
           PAPE HPANQFLRDWF SGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 383 CQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDG-VNRIEQFGDGVNVETE 433
           CQALDWKL+HKTECAPFDRWLIE+D+LE DDD G VNRIEQF DG NVE+E
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of Cp4.1LG09g09610 vs. TrEMBL
Match: B9RAG1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506210 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 8.9e-127
Identity = 228/351 (64.96%), Postives = 274/351 (78.06%), Query Frame = 1


Query: 83  MVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLA 142
           M   KR++TS  T     DLFD+LPDD++V +L KLS++AS PSD +N++ TCKR NRLA
Sbjct: 1   MYQRKRQKTSRRTPEK-SDLFDELPDDIVVCILSKLSSSASCPSDFINILFTCKRLNRLA 60

Query: 143 LHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGAS 202
           L P+VLSKAGP+ F ++ KNW +S HRFLKLC++AGN EA YTLGM+ FYC++NRG GAS
Sbjct: 61  LQPVVLSKAGPQTFAVKAKNWSDSAHRFLKLCINAGNTEASYTLGMIRFYCLQNRGVGAS 120

Query: 203 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCL 262
           LMAKAAIKSH  ALYSLA++QFNGSGGSK DK+LRAGV+LC RAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHAPALYSLAVMQFNGSGGSKIDKDLRAGVSLCARAAVLGHIDALRELGHCL 180

Query: 263 QDGYGVAQNASEGRRLLIEANARELASITNSSL----------RRLNCSVDRPTTTDSSG 322
           QDGYGVAQN +EGRRLL++ANARELAS   S L          +  +C V      +S+G
Sbjct: 181 QDGYGVAQNIAEGRRLLVQANARELASSLRSMLTWQPHNQHHRQYASCEV-----MESAG 240

Query: 323 -SLLSDFGYNIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCS 382
             LLSDFG N+PA EVHPAN+FL +WF SGRG +  GLRLCS+SGCGRPETR HEFRRCS
Sbjct: 241 CPLLSDFGCNVPAREVHPANRFLSEWFESGRGLLGPGLRLCSHSGCGRPETRPHEFRRCS 300

Query: 383 VCGNVNYCSRGCQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDGVNRIEQ 423
           VCG VNYCSRGCQALDWKL+HK EC P ++WL+ +DD  D++   +  IE+
Sbjct: 301 VCGTVNYCSRGCQALDWKLRHKMECVPLEQWLVVEDDGHDNEIGAMVEIEE 345

[Close]

BLAST of Cp4.1LG09g09610 vs. TrEMBL
Match: M5WT99_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008057mg PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 5.8e-126
Identity = 224/349 (64.18%), Postives = 271/349 (77.65%), Query Frame = 1


Query: 83  MVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLA 142
           M  ++++  S+       D FD LPDDL+V +L KLS++ASSPSDL+N+++TCKR NRL 
Sbjct: 4   MTLHRKKLKSSRRTTAKSDFFDGLPDDLVVFILCKLSSSASSPSDLINILITCKRLNRLG 63

Query: 143 LHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGAS 202
           LH +VLSKAGPKAF IR KNW +S HRFLK CVSAGN+EACYTLGM+ FY ++NRG+GAS
Sbjct: 64  LHSVVLSKAGPKAFAIRAKNWSDSAHRFLKQCVSAGNIEACYTLGMIRFYSLQNRGSGAS 123

Query: 203 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCL 262
           LMAKAA++SH  ALYSLA+VQFNGSGGSK +K+LRAGVALC RAA LGH+DALRELGHCL
Sbjct: 124 LMAKAAMRSHAPALYSLAVVQFNGSGGSKKEKDLRAGVALCARAASLGHVDALRELGHCL 183

Query: 263 QDGYGVAQNASEGRRLLIEANARELASITNSSLRRLN--CSVDRPTTTDSSGSLLSDFGY 322
           QDGYGV QN +EGRRLL++ANARELAS+  S+  R +    +    T   S  LLSDFG 
Sbjct: 184 QDGYGVKQNVAEGRRLLVQANARELASVLRSATWRSHHYQHLYACLTGLVSCPLLSDFGC 243

Query: 323 NIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 382
           N+PAPE+HPAN+FL++WF SGR    +G+RLCS+ GCGRPETR HEFRRCSVCG VNYCS
Sbjct: 244 NVPAPELHPANRFLKEWFGSGRAISGQGMRLCSHVGCGRPETRPHEFRRCSVCGTVNYCS 303

Query: 383 RGCQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDGVNRIEQFGDGVNV 430
           RGCQALDWKL+HK +C P +RWL  D +L          + + GDG NV
Sbjct: 304 RGCQALDWKLRHKVKCKPIERWLGVDGEL--------GGLVEGGDGENV 344

[Close]

BLAST of Cp4.1LG09g09610 vs. TrEMBL
Match: A0A0D2RJ28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G206200 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 7.5e-126
Identity = 218/331 (65.86%), Postives = 263/331 (79.46%), Query Frame = 1


Query: 101 DLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHPMVLSKAGPKAFEIRI 160
           DLFD LP+DL++ +L KL+++ASSPSD +N+++TCKR NRLALHP+VLSKAG KA  ++ 
Sbjct: 18  DLFDGLPEDLVISILSKLASSASSPSDFINILVTCKRLNRLALHPLVLSKAGSKALAVKA 77

Query: 161 KNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMAKAAIKSHPLALYSLA 220
           +NWC+S H FLK C++AGNVEACYTLGM++FYC++NRG+GASL+AKAAIKSH  ALYSL 
Sbjct: 78  RNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASLLAKAAIKSHAPALYSLG 137

Query: 221 IVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDGYGVAQNASEGRRLLI 280
           ++QFNGSGGSK+DK+LRAGVALC RAA LGH+DALRELGHCLQDGYGV Q+ +EGRRLLI
Sbjct: 138 VIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQHIAEGRRLLI 197

Query: 281 EANARELASITNSSL---------RRLNCSVDRPTTTDSSGSLLSDFGYNIPAPEVHPAN 340
            ANARELAS  N+ +         RRLN          S   LLSDFG N+PAPEVHP N
Sbjct: 198 RANARELASSLNALVKRKPQQQHQRRLNYQ-HYSFKAGSGCPLLSDFGCNVPAPEVHPVN 257

Query: 341 QFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLQ 400
            F ++WF SGRG + +GLRLCS+ GCGRPETR HEFRRCSVCG VNYCSRGCQALDWKL+
Sbjct: 258 VFSKEWFESGRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCGTVNYCSRGCQALDWKLR 317

Query: 401 HKTECAPFDRWLIEDDDLEDDDDDGVNRIEQ 423
           HK EC P +RWL E  + +D    GV  +E+
Sbjct: 318 HKAECGPIERWLEEGGNGDDGGHGGVGEMEE 347

[Close]

BLAST of Cp4.1LG09g09610 vs. TrEMBL
Match: A0A0B0PKV7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02830 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 9.8e-126
Identity = 219/331 (66.16%), Postives = 262/331 (79.15%), Query Frame = 1


Query: 101 DLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHPMVLSKAGPKAFEIRI 160
           DLFD LP+DL++ +L KL+ +ASSPSD +N+++TCKR NRLALHP+VLSKAG KA  ++ 
Sbjct: 18  DLFDGLPEDLVISILSKLAYSASSPSDFINILVTCKRLNRLALHPLVLSKAGSKALAVKA 77

Query: 161 KNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMAKAAIKSHPLALYSLA 220
            NWC+S H FLK C++AGNVEACYTLGM++FYC++NRG+GASL+AKAAIKSH  ALYSL 
Sbjct: 78  GNWCDSAHHFLKHCINAGNVEACYTLGMIQFYCLQNRGSGASLLAKAAIKSHAPALYSLG 137

Query: 221 IVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDGYGVAQNASEGRRLLI 280
           ++QFNGSGGSK+DK+LRAGVALC RAA LGH+DALRELGHCLQDGYGV Q+ +EGRRLLI
Sbjct: 138 VIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQHIAEGRRLLI 197

Query: 281 EANARELASITNSSL---------RRLNCSVDRPTTTDSSGSLLSDFGYNIPAPEVHPAN 340
           +ANARELAS  N+ +         RRLN          S   LLSDFG N+PAPEVHP N
Sbjct: 198 QANARELASSLNALVKRKAQQQHQRRLNYQ-HYSFKAGSGCPLLSDFGCNVPAPEVHPVN 257

Query: 341 QFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLQ 400
            FL++WF SGRG + +GLRLCS+ GCGRPETR HEFRRCSVCG VNYCSRGCQALDWKL+
Sbjct: 258 VFLKEWFESGRGALGQGLRLCSHKGCGRPETRAHEFRRCSVCGTVNYCSRGCQALDWKLR 317

Query: 401 HKTECAPFDRWLIEDDDLEDDDDDGVNRIEQ 423
           HK EC P +RWL E  +  D    GV  +E+
Sbjct: 318 HKAECGPIERWLEEGGNGNDGGHGGVGEMEE 347

[Close]

BLAST of Cp4.1LG09g09610 vs. TAIR10
Match: AT1G67340.1 (AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 425.6 bits (1093), Expect = 3.6e-119
Identity = 209/338 (61.83%), Postives = 255/338 (75.44%), Query Frame = 1


Query: 101 DLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHPMVLSKAGPKAFEIRI 160
           DL D +PDDL++ +L KL + +  P+D +NV+LTCKR   LA++P+VLS+  PKA  ++ 
Sbjct: 42  DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKA 101

Query: 161 KNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMAKAAIKSHPLALYSLA 220
            NW E +HRFLK CV AG++EACYTLGM+ FYC++NRGNGASLMAKAAI SH  ALYSLA
Sbjct: 102 HNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLA 161

Query: 221 IVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDGYGVAQNASEGRRLLI 280
           ++QFNGSGGSK+DK+LRAGVALC RAA LGH+DALRELGHCLQDGYGV QN SEGRR L+
Sbjct: 162 VIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLV 221

Query: 281 EANARELASITNSSLRR----LNCSVDRPTTTDSSGS----LLSDFGYNIPAPEVHPANQ 340
           +ANARELA++ +S ++     L+ S   P    + G     LLSDFG N+PAPE HPAN+
Sbjct: 222 QANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANR 281

Query: 341 FLRDWF-TSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLQ 400
           FL DWF   G     +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL+
Sbjct: 282 FLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLR 341

Query: 401 HKTECAPFDRWLIEDDDLEDDDDDGVNRIEQFGDGVNV 430
           HK +CAP  RWL      E D  +G  +I+  G+G NV
Sbjct: 342 HKMDCAPVQRWL-----EEGDGGEGNVQIDGNGNGDNV 374

[Close]

BLAST of Cp4.1LG09g09610 vs. TAIR10
Match: AT5G50450.1 (AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 410.2 bits (1053), Expect = 1.6e-114
Identity = 196/329 (59.57%), Postives = 249/329 (75.68%), Query Frame = 1


Query: 86  NKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHP 145
           NK++R        +++ F+DL DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 146 MVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMA 205
           +VLSKAG +   +  + W +S+H+FLKLCV+AGN++A Y+LGM+ FYC++N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 206 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDG 265
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+A LGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 266 YGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPTTTDSSGSLLSDFGYNIPAP 325
           YGV ++ SEGRRLLI+ANARELA    S L  L    +  T TD S          +P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELACSLRSYL-SLKSGDENETLTDLS---------VVPVQ 244

Query: 326 EVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 385
           E+HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 386 LDWKLQHKTECAPFDRWLIEDDDLEDDDD 415
           LDW+ +HK EC P D W+    ++ DD +
Sbjct: 305 LDWRAKHKVECTPLDLWVAAAAEIGDDGE 323

[Close]

BLAST of Cp4.1LG09g09610 vs. NCBI nr
Match: gi|659067491|ref|XP_008439699.1| (PREDICTED: F-box protein At1g67340 [Cucumis melo])

HSP 1 Score: 635.6 bits (1638), Expect = 6.4e-179
Identity = 309/350 (88.29%), Postives = 326/350 (93.14%), Query Frame = 1


Query: 83  MVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLA 142
           M+CNKRRRTST+  AGI DLFD LPDDL+V++LGKLSA ASSPSDLVNVM+TCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 143 LHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGAS 202
           LHP+VLSKAGPKAFEI+ KNW ESTHRFLKLCVSAGNVEACYTLGM+EFYC+KNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 203 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCL 262
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 263 QDGYGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPTTTDSSGSLLSDFGYNI 322
           QDGYGV QNASEGRRLLIEANARELA ITNSSLRRL+CS  R + TDS GSLLSDFG N 
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 323 PAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 382
           PAPE HPANQFLRDWF SGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 383 CQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDGVNRIEQFGDGVNVETE 433
           CQALDWKL+HKTECAPFDRWLIED++LE D+D GVNRIEQFGDG NVE+E
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of Cp4.1LG09g09610 vs. NCBI nr
Match: gi|449474252|ref|XP_004154118.1| (PREDICTED: F-box protein At1g67340 [Cucumis sativus])

HSP 1 Score: 625.5 bits (1612), Expect = 6.7e-176
Identity = 307/351 (87.46%), Postives = 323/351 (92.02%), Query Frame = 1


Query: 83  MVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLA 142
           M+CNKRRRTST+ A GI DLFD LPDDL+V++LGKLSA ASSP DLVNVM+TCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 143 LHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGAS 202
           LHP+VLSKAGPKAFEI+ KNW ESTHRFLKLCVSAGNVEACYTLGM+EFYC+KNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 203 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCL 262
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 263 QDGYGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPTTTDSSGSLLSDFGYNI 322
           QDGYGV QN SEGRRLLIEANARELA ITNSSLRRL+CS  R + TDS GSLLSDFG N 
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 323 PAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 382
           PAPE HPANQFLRDWF SGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 383 CQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDG-VNRIEQFGDGVNVETE 433
           CQALDWKL+HKTECAPFDRWLIE+D+LE DDD G VNRIEQF DG NVE+E
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of Cp4.1LG09g09610 vs. NCBI nr
Match: gi|1009130202|ref|XP_015882169.1| (PREDICTED: F-box protein At1g67340 [Ziziphus jujuba])

HSP 1 Score: 462.6 bits (1189), Expect = 7.5e-127
Identity = 231/343 (67.35%), Postives = 266/343 (77.55%), Query Frame = 1


Query: 84  VCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLAL 143
           +C K+ +TS        D FD LPDDL+V +L KLSA+ASSPSD +N+ LTCKR NRL L
Sbjct: 1   MCGKKLKTSHGITTEESDFFDGLPDDLVVFILCKLSASASSPSDFINIFLTCKRLNRLGL 60

Query: 144 HPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASL 203
           HP+VLSKAGPKAF I+  NWC+S  RFLK CV+AGNVEA Y LGM+ FYC++NRG+GASL
Sbjct: 61  HPLVLSKAGPKAFAIKANNWCDSAQRFLKQCVNAGNVEASYILGMIRFYCLQNRGSGASL 120

Query: 204 MAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQ 263
           MAKAAIKSH  +LYSLA++QFNGSG SKSDK+L+AGVALC RAA LGHIDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPSLYSLAVIQFNGSGASKSDKDLKAGVALCARAAYLGHIDALRELGHCLQ 180

Query: 264 DGYGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPTTTDSSG---SLLSDFGY 323
           DGYGV QN +EGRRLL++ANARELAS+  S+    N +    T T SS     LLSDFG 
Sbjct: 181 DGYGVRQNIAEGRRLLVQANARELASVLRSASWGPN-NYQYLTLTGSSPLSFPLLSDFGC 240

Query: 324 NIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 383
           ++PAPE HPAN FLRDWF SGRG ++  LRLC + GCGRPETR HEFRRCSVCG VNYCS
Sbjct: 241 SLPAPEFHPANLFLRDWFGSGRGVLSPRLRLCGHVGCGRPETRPHEFRRCSVCGVVNYCS 300

Query: 384 RGCQALDWKLQHKTECAPFDRWLIED---DDLEDDDDDGVNRI 421
           RGCQALDWKL+HK  C P +RWL +D   DD  D D DGV  I
Sbjct: 301 RGCQALDWKLRHKAHCRPIERWLEDDVAGDDAVDGDVDGVGEI 342

[Close]

BLAST of Cp4.1LG09g09610 vs. NCBI nr
Match: gi|255540243|ref|XP_002511186.1| (PREDICTED: F-box protein At1g67340 [Ricinus communis])

HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126
Identity = 228/351 (64.96%), Postives = 274/351 (78.06%), Query Frame = 1


Query: 83  MVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLA 142
           M   KR++TS  T     DLFD+LPDD++V +L KLS++AS PSD +N++ TCKR NRLA
Sbjct: 1   MYQRKRQKTSRRTPEK-SDLFDELPDDIVVCILSKLSSSASCPSDFINILFTCKRLNRLA 60

Query: 143 LHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGAS 202
           L P+VLSKAGP+ F ++ KNW +S HRFLKLC++AGN EA YTLGM+ FYC++NRG GAS
Sbjct: 61  LQPVVLSKAGPQTFAVKAKNWSDSAHRFLKLCINAGNTEASYTLGMIRFYCLQNRGVGAS 120

Query: 203 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCL 262
           LMAKAAIKSH  ALYSLA++QFNGSGGSK DK+LRAGV+LC RAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHAPALYSLAVMQFNGSGGSKIDKDLRAGVSLCARAAVLGHIDALRELGHCL 180

Query: 263 QDGYGVAQNASEGRRLLIEANARELASITNSSL----------RRLNCSVDRPTTTDSSG 322
           QDGYGVAQN +EGRRLL++ANARELAS   S L          +  +C V      +S+G
Sbjct: 181 QDGYGVAQNIAEGRRLLVQANARELASSLRSMLTWQPHNQHHRQYASCEV-----MESAG 240

Query: 323 -SLLSDFGYNIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCS 382
             LLSDFG N+PA EVHPAN+FL +WF SGRG +  GLRLCS+SGCGRPETR HEFRRCS
Sbjct: 241 CPLLSDFGCNVPAREVHPANRFLSEWFESGRGLLGPGLRLCSHSGCGRPETRPHEFRRCS 300

Query: 383 VCGNVNYCSRGCQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDGVNRIEQ 423
           VCG VNYCSRGCQALDWKL+HK EC P ++WL+ +DD  D++   +  IE+
Sbjct: 301 VCGTVNYCSRGCQALDWKLRHKMECVPLEQWLVVEDDGHDNEIGAMVEIEE 345

[Close]

BLAST of Cp4.1LG09g09610 vs. NCBI nr
Match: gi|645268322|ref|XP_008239475.1| (PREDICTED: F-box protein At1g67340 [Prunus mume])

HSP 1 Score: 460.7 bits (1184), Expect = 2.8e-126
Identity = 227/345 (65.80%), Postives = 272/345 (78.84%), Query Frame = 1


Query: 87  KRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLALHPM 146
           K+ R+S  T A   D FD LPDDL+V +L KLS++ASSPSDL+N+++TCKR NRL LH +
Sbjct: 9   KKLRSSRRTTAK-SDFFDGLPDDLVVFILCKLSSSASSPSDLINILITCKRLNRLGLHSV 68

Query: 147 VLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGASLMAK 206
           VLSKAGPKAF IR  NW +S HRFLK CVSAGN+EACYTLGM+ FYC++NRG+GASLMAK
Sbjct: 69  VLSKAGPKAFAIRANNWSDSAHRFLKQCVSAGNIEACYTLGMIRFYCLQNRGSGASLMAK 128

Query: 207 AAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCLQDGY 266
           AA++S+  ALYSLA+VQFNGSGGSK +K+LRAGVALC RAA LGH+DALRELGHCLQDGY
Sbjct: 129 AAMRSYAPALYSLAVVQFNGSGGSKKEKDLRAGVALCARAASLGHVDALRELGHCLQDGY 188

Query: 267 GVAQNASEGRRLLIEANARELASITNSSLRRLN--CSVDRPTTTDSSGSLLSDFGYNIPA 326
           GV QN +EGRRLL++ANARELAS+  S+  R +    +    T   S  LLSDFG N+PA
Sbjct: 189 GVKQNVTEGRRLLVQANARELASVLRSATWRSHHYQHLYSCLTGLVSCPLLSDFGCNVPA 248

Query: 327 PEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQ 386
           PE+HPAN+FL++WF SGRG   +G+RLCS+ GCGRPETR HEFRRCSVCG VNYCSRGCQ
Sbjct: 249 PELHPANRFLKEWFGSGRGISGQGMRLCSHVGCGRPETRPHEFRRCSVCGTVNYCSRGCQ 308

Query: 387 ALDWKLQHKTECAPFDRWLIEDDDLEDDDDDGVNRIEQFGDGVNV 430
           ALDWKL+HK +C P +RWL  D +L          + + GDG NV
Sbjct: 309 ALDWKLRHKVKCKPIERWLGVDAEL--------GGLVEGGDGENV 344

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB76_ARATH	6.3e-118	61.83	F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1	[more]
FB342_ARATH	2.8e-113	59.57	F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1	[more]

BLAST of Cp4.1LG09g09610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV0_CUCSA	4.7e-176	87.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050480 PE=4 SV=1	[more]
B9RAG1_RICCO	8.9e-127	64.96	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506210 PE=4 SV=1	[more]
M5WT99_PRUPE	5.8e-126	64.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008057mg PE=4 SV=1	[more]
A0A0D2RJ28_GOSRA	7.5e-126	65.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G206200 PE=4 SV=1	[more]
A0A0B0PKV7_GOSAR	9.8e-126	66.16	Uncharacterized protein OS=Gossypium arboreum GN=F383_02830 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g09610 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67340.1	3.6e-119	61.83	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	1.6e-114	59.57	HCP-like superfamily protein with MYND-type zinc finger	[more]

BLAST of Cp4.1LG09g09610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067491\|ref\|XP_008439699.1\|	6.4e-179	88.29	PREDICTED: F-box protein At1g67340 [Cucumis melo]	[more]
gi\|449474252\|ref\|XP_004154118.1\|	6.7e-176	87.46	PREDICTED: F-box protein At1g67340 [Cucumis sativus]	[more]
gi\|1009130202\|ref\|XP_015882169.1\|	7.5e-127	67.35	PREDICTED: F-box protein At1g67340 [Ziziphus jujuba]	[more]
gi\|255540243\|ref\|XP_002511186.1\|	1.3e-126	64.96	PREDICTED: F-box protein At1g67340 [Ricinus communis]	[more]
gi\|645268322\|ref\|XP_008239475.1\|	2.8e-126	65.80	PREDICTED: F-box protein At1g67340 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002893	Znf_MYND
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g09610.1	Cp4.1LG09g09610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 104..145 score: 2.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 97..149 score: 2.2
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 356..396 score: 3.
IPR002893	Zinc finger, MYND-type	PROFILE	PS50865	ZF_MYND_2	coord: 354..396 score: 11
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 171..283 score: 4.7
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 101..146 score: 3.
None	No IPR available	PANTHER	PTHR12298	PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED	coord: 90..414 score: 1.0E
None	No IPR available	PANTHER	PTHR12298:SF7	SUBFAMILY NOT NAMED	coord: 90..414 score: 1.0E
None	No IPR available	unknown	SSF144232	HIT/MYND zinc finger-like	coord: 352..401 score: 2.27
None	No IPR available	unknown	SSF81901	HCP-like	coord: 168..282 score: 8.37

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g09610	Cucsa.392080	Cucumber (Gy14) v1	cgycpeB1034
Cp4.1LG09g09610	CmaCh13G008040	Cucurbita maxima (Rimu)	cmacpeB214
Cp4.1LG09g09610	CmaCh18G003180	Cucurbita maxima (Rimu)	cmacpeB414
Cp4.1LG09g09610	CmoCh13G008360	Cucurbita moschata (Rifu)	cmocpeB184
Cp4.1LG09g09610	CmoCh18G002180	Cucurbita moschata (Rifu)	cmocpeB377
Cp4.1LG09g09610	Cla002619	Watermelon (97103) v1	cpewmB025
Cp4.1LG09g09610	Csa1G050480	Cucumber (Chinese Long) v2	cpecuB029
Cp4.1LG09g09610	MELO3C002360	Melon (DHL92) v3.5.1	cpemeB026
Cp4.1LG09g09610	ClCG03G003750	Watermelon (Charleston Gray)	cpewcgB036
Cp4.1LG09g09610	CSPI01G09530	Wild cucumber (PI 183967)	cpecpiB025
Cp4.1LG09g09610	Lsi02G005030	Bottle gourd (USVL1VR-Ls)	cpelsiB026
Cp4.1LG09g09610	MELO3C026207.2	Melon (DHL92) v3.6.1	cpemedB041
Cp4.1LG09g09610	MELO3C002360.2	Melon (DHL92) v3.6.1	cpemedB031
Cp4.1LG09g09610	CsaV3_1G000570	Cucumber (Chinese Long) v3	cpecucB0029
Cp4.1LG09g09610	CsaV3_1G009640	Cucumber (Chinese Long) v3	cpecucB0031
Cp4.1LG09g09610	Bhi08G001227	Wax gourd	cpewgoB0048
Cp4.1LG09g09610	CsGy1G009560	Cucumber (Gy14) v2	cgybcpeB018
Cp4.1LG09g09610	CsGy1G000550	Cucumber (Gy14) v2	cgybcpeB015
Cp4.1LG09g09610	Carg06796	Silver-seed gourd	carcpeB0694
Cp4.1LG09g09610	Carg07602	Silver-seed gourd	carcpeB1396
Cp4.1LG09g09610	Carg10281	Silver-seed gourd	carcpeB0507

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG09g09610	Cp4.1LG18g09180	Cucurbita pepo (Zucchini)	cpecpeB029
Cp4.1LG09g09610	Cp4.1LG20g03040	Cucurbita pepo (Zucchini)	cpecpeB045

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g09610	Cucumber (Gy14) v1	cgycpeB0419
Cp4.1LG09g09610	Cucurbita moschata (Rifu)	cmocpeB045
Cp4.1LG09g09610	Watermelon (Charleston Gray)	cpewcgB051
Cp4.1LG09g09610	Watermelon (97103) v1	cpewmB061