Lsi02G000430 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G000430
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPectate lyase
Locationchr02 : 427990 .. 429978 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCACCACTCAACAACTCTTTGTTCTGTCTCTCATTTCCCTCACTCTCCTCTCCGCCGCAGTTTCCTATTCAGAAGCCCATGGCTTGAAGATGAACGCCATTGACAGATGCTGGAGATCAAACCCATACTGGAGAAGAAACAGGCAACAACTCGCCGTTTGTTCAGTTGGGTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCAACAATGATCAAACCCAAAGTCTGGATCACATTCCGAAAAGACATGAATATTGTGCTTAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCTACCGTCCACATCACCGGGAATGCGTGTCTGATGGTTTTCAAGGCCACCAACATCATAATCCACGGCCTTATTATCCACCACTGCAGGGCTCAGGCGGCGGGTCAAGTCATGGGCCCCAATTCGAAGATCATTTCACTTGGACACGTGGATGGTGATGCCATTCGTTTAGTAACGGCCTCCAAAGTGTGGGTTGACCACAACACGCTGTACCGCTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGACCAAGACAAGGTTATTCTTCTTGGTCACGATGACGGCTATGTCCGAGATCGGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAATTGCAACCAGAGAATGCCAAGGTATCAAATATTCTTAAATTCTGTATTTTTTGTTTTTGTTAAAAATACCTTTTAAGTTTTAAAATATCCTCAAATTAAAAAAAAAAAAAATCAAAATTATCTATATGGATGAAAACGGTTAATGTTTTATGTAAACAATACCTTTAAACTTTTAAAAAAAATATTTAAAAATATCTTTACTGTCATATATACATCCGAGAGAAAAAAAGTAGAAAATTATAGAAGAGGACAATAACAATTCTTGTTCATATATACCAGTAGTAAAGGTATTTTTTAAAATATTTTATAAGTTTAAATATATTTTTGACACTTTTAAAAGTTTATGTGTATTTTTGTAACAAAACATTAAAGATTTTCTTTCAAAACTGTCCGCAAAAGTACTTTTGAATTCTTTATAAAAGTTTAACGTTGATTTTGAAACTTTTAAAAGTTAAAGGATATTTTTTATACAAAGTGTAAAGTTCAAAGGTATTTTTTTATATAATTTAGCCCAATATATATTATGAAATAATTAACATTTTTTTTTGAGAAAATGAAATATAATTAACATTGCTAAATAATTATCAAACACAATATTAATAGGATAATATTTGAGTGTATCTTAATATGCATCCATCTTTATTCATCCTCTCAAATTTGCTGATGAGATGAAAAAAATAAGTGGTGCTCGGAATACATTTAATATAAAGTATTTTTGGTATTAATATACTCATATTGTAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCGAGCGTCAAGAGCGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGGTAACAATAATACTAAAATTAAATTGAATTTGGATATATATATATATATATATATATATATAAAATAATATTGATTTGAAAATTGAGTTTTTTTTTTTTTTTTTTTAATTAATGCAAATGCAGATTATATGGAGCACAGGGAAGGTAGAGGAGACTAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTCATTTGCACAAATTGGTGTGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGGTTTCCAGTTGCAGATGCCAAGTGGCTCAGATCATTAACAAGCTCCTCCGGGGCATTACGCTGCTCATCAAACTCAAAATGTTGA

mRNA sequence

ATGACCACCACTCAACAACTCTTTGTTCTGTCTCTCATTTCCCTCACTCTCCTCTCCGCCGCAGTTTCCTATTCAGAAGCCCATGGCTTGAAGATGAACGCCATTGACAGATGCTGGAGATCAAACCCATACTGGAGAAGAAACAGGCAACAACTCGCCGTTTGTTCAGTTGGGTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCAACAATGATCAAACCCAAAGTCTGGATCACATTCCGAAAAGACATGAATATTGTGCTTAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCTACCGTCCACATCACCGGGAATGCGTGTCTGATGGTTTTCAAGGCCACCAACATCATAATCCACGGCCTTATTATCCACCACTGCAGGGCTCAGGCGGCGGGTCAAGTCATGGGCCCCAATTCGAAGATCATTTCACTTGGACACGTGGATGGTGATGCCATTCGTTTAGTAACGGCCTCCAAAGTGTGGGTTGACCACAACACGCTGTACCGCTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGACCAAGACAAGGTTATTCTTCTTGGTCACGATGACGGCTATGTCCGAGATCGGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAATTGCAACCAGAGAATGCCAAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCGAGCGTCAAGAGCGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGATTATATGGAGCACAGGGAAGGTAGAGGAGACTAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTCATTTGCACAAATTGGTGTGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGGTTTCCAGTTGCAGATGCCAAGTGGCTCAGATCATTAACAAGCTCCTCCGGGGCATTACGCTGCTCATCAAACTCAAAATGTTGA

Coding sequence (CDS)

ATGACCACCACTCAACAACTCTTTGTTCTGTCTCTCATTTCCCTCACTCTCCTCTCCGCCGCAGTTTCCTATTCAGAAGCCCATGGCTTGAAGATGAACGCCATTGACAGATGCTGGAGATCAAACCCATACTGGAGAAGAAACAGGCAACAACTCGCCGTTTGTTCAGTTGGGTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCAACAATGATCAAACCCAAAGTCTGGATCACATTCCGAAAAGACATGAATATTGTGCTTAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCTACCGTCCACATCACCGGGAATGCGTGTCTGATGGTTTTCAAGGCCACCAACATCATAATCCACGGCCTTATTATCCACCACTGCAGGGCTCAGGCGGCGGGTCAAGTCATGGGCCCCAATTCGAAGATCATTTCACTTGGACACGTGGATGGTGATGCCATTCGTTTAGTAACGGCCTCCAAAGTGTGGGTTGACCACAACACGCTGTACCGCTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGACCAAGACAAGGTTATTCTTCTTGGTCACGATGACGGCTATGTCCGAGATCGGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAATTGCAACCAGAGAATGCCAAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCGAGCGTCAAGAGCGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGATTATATGGAGCACAGGGAAGGTAGAGGAGACTAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTCATTTGCACAAATTGGTGTGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGGTTTCCAGTTGCAGATGCCAAGTGGCTCAGATCATTAACAAGCTCCTCCGGGGCATTACGCTGCTCATCAAACTCAAAATGTTGA

Protein sequence

MTTTQQLFVLSLISLTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC
Homology
[Close]
BLAST of Lsi02G000430 vs. Swiss-Prot
Match: PLY2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 2.2e-90
Identity = 173/384 (45.05%), Postives = 236/384 (61.46%), Query Frame = 1 

Query: 7   LFVLSLISLTLLSAAVSYSEAHG-----LKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAG 66
           L ++SL+     S+ V  + ++G     L  N ID CWR NPYW  NR+ LA C+VGF  
Sbjct: 6   LTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGK 65

Query: 67  KMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLIS 126
                   ++  Y VT+PSDDP NPRPGTLRY     KP +WITF +DM IVL+  L+++
Sbjct: 66  SAVGGKYGSI--YVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNELIMN 125

Query: 127 SFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVD 186
           S+  IDGRGA V I    C+ +   +++IIHG+ IH C+   +G+V    + + S    D
Sbjct: 126 SYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSD 185

Query: 187 GDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVR 246
           GDAI +  +S +W+DH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V 
Sbjct: 186 GDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVE 245

Query: 247 DRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFI 306
           D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F+
Sbjct: 246 DKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFV 305

Query: 307 ASKSKQIIWSTGKVEE----TKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPV 366
           AS        T +++      +WK+ + +DVF+NGA F  +  G G V P Y   +RFPV
Sbjct: 306 ASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFPV 365

Query: 367 ADAKWLRSLTSSSGALRCSSNSKC 382
           +    +  LTSS+G L C S   C
Sbjct: 366 SHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]
BLAST of Lsi02G000430 vs. Swiss-Prot
Match: PLY4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.0e-87
Identity = 177/378 (46.83%), Postives = 231/378 (61.11%), Query Frame = 1 

Query: 9   VLSLISLTLLSAAVSYS-EAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNM 68
           +L+  +  LL  A SY+  A  + +N ID CWR NP W  NRQ LA C+VG+ GK     
Sbjct: 11  LLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG- 70

Query: 69  GRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAID 128
           G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVLK  L+I+S+  ID
Sbjct: 71  GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQLMINSYKTID 130

Query: 129 GRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRL 188
           GRGA V I    CL + +  ++IIHG+ IH C+A   G              +DGD IR+
Sbjct: 131 GRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRV 190

Query: 189 VTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRV 248
             ++ VW+DH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y+ D++MRV
Sbjct: 191 FQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRV 250

Query: 249 TVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQ 308
           T+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + + 
Sbjct: 251 TIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRS 310

Query: 309 IIWSTGKV----EETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWL 368
               T ++    +  +WK+ + RDVF NGA F   GV    V+P Y   + F VA    +
Sbjct: 311 SKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSLV 368

Query: 369 RSLTSSSGALRCSSNSKC 382
            SLTSS+G LRC     C
Sbjct: 371 PSLTSSAGPLRCYVGRIC 368

[Close]
BLAST of Lsi02G000430 vs. Swiss-Prot
Match: PLY16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-85
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 1 

Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L+  L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+    G V    + +      DGDAI +  +S +W+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Lsi02G000430 vs. Swiss-Prot
Match: PLY17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.1e-85
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 1 

Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L   L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+   +G+V    + +      DGDAI +  +S VW+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Lsi02G000430 vs. Swiss-Prot
Match: PLY9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.0e-82
Identity = 160/355 (45.07%), Postives = 210/355 (59.15%), Query Frame = 1 

Query: 33  NAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPI-NPRPGTL 92
           N ID CWR +  W +NR+ LA C +GF  K     GRN   Y VTD SDD + NP+PGTL
Sbjct: 104 NLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFG--GRNGSYYVVTDHSDDDVVNPKPGTL 163

Query: 93  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 152
           R+    ++P +WI F++DM I LK+ L+++SF  ID RGA VHI   AC+ +   TN+I+
Sbjct: 164 RHAVIQVEP-LWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIV 223

Query: 153 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 212
           HGL IH C+      V    S+    G  DGDAI +  +S +W+DHN+L  C DGL+DV 
Sbjct: 224 HGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVV 283

Query: 213 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 272
            GST ITISNN F   D+V+LLGH+D Y RD+ M+VTV YNHFG    QRMPR R+GY H
Sbjct: 284 NGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFH 343

Query: 273 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIIWSTGKV-----EETKWKFHSVR 332
           V NN Y  W  YAIGGS NP++ S+ N F A K+      T ++     E  +W + S +
Sbjct: 344 VVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEK 403

Query: 333 DVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           D+  NGA F   G G  G     +     P   A  + ++T+S+GAL C     C
Sbjct: 404 DLLVNGAFFTPSGEGASGDSQTLS----LPAKPASMVDAITASAGALSCRRGKPC 451

[Close]
BLAST of Lsi02G000430 vs. TrEMBL
Match: A0A0A0LPZ1_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 3.2e-205
Identity = 344/381 (90.29%), Postives = 368/381 (96.59%), Query Frame = 1 

Query: 2   TTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFA 61
           TTTQQL VLSLIS + L+S AVSYSEAHGL MNAIDRCWRSNPYWR+NRQQLA CSVGFA
Sbjct: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63

Query: 62  GKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLI 121
           GKMTNNMGRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL+
Sbjct: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123

Query: 122 SSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHV 181
           SSFTAIDGRG+TVHITGNACLMV +ATNIIIHGLIIHHC++QAAGQVMGPN+K+ISLG+V
Sbjct: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183

Query: 182 DGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241
           DGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243

Query: 242 RDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301
           RDR+MRVTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303

Query: 302 IASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADA 361
           IASKSKQ+IWSTGKVEE KWKFHSVRD FENGASFA+IGVG+G VKPNYN QQRFPVADA
Sbjct: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363

Query: 362 KWLRSLTSSSGALRCSSNSKC 382
           KW+R+LTSSSGALRC+SNSKC
Sbjct: 364 KWIRALTSSSGALRCTSNSKC 384

[Close]
BLAST of Lsi02G000430 vs. TrEMBL
Match: A0A067KZ75_JATCU (Pectate lyase OS=Jatropha curcas GN=JCGZ_15918 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.5e-154
Identity = 254/347 (73.20%), Postives = 301/347 (86.74%), Query Frame = 1 

Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           +NAID CWR NP+WRR+RQQLA CS+GFAGKM NN+G+N+IRY+VTDPSDDP+NP+PGTL
Sbjct: 26  INAIDSCWRQNPHWRRSRQQLAKCSIGFAGKMINNIGKNVIRYKVTDPSDDPLNPKPGTL 85

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYGAT+IK KVWITF+K+M+I L KPLLISSFTA+DGRG ++HITGNACL+++K +N+II
Sbjct: 86  RYGATLIKEKVWITFQKNMHIKLDKPLLISSFTALDGRGVSIHITGNACLLLYKVSNVII 145

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HGL IHHC+A A G V GP+ KI+ L  +DGDAIRLVTASKVW+DHNTLY C+DGLLDVT
Sbjct: 146 HGLNIHHCKASAPGSVRGPDGKIMPLSQMDGDAIRLVTASKVWIDHNTLYACQDGLLDVT 205

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
           RGST  TISNNWFRDQDKV+LLGHDDGY RD+NM+VTVVYNHFGPNCNQRMPR+RYGYAH
Sbjct: 206 RGSTSTTISNNWFRDQDKVMLLGHDDGYFRDKNMKVTVVYNHFGPNCNQRMPRVRYGYAH 265

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS--KQIIWSTGKVEETK-WKFHSVRDV 331
           V NN YQGW QYAIGGSMNPS+KSEAN F+  KS  K++ W  G  E+++ W F+S RD+
Sbjct: 266 VVNNFYQGWEQYAIGGSMNPSIKSEANCFVPLKSGKKEVTWRNGINEKSQPWNFYSSRDI 325

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRC 376
           FENGASF Q G G G  KPNYN QQ+F VADAK+++S+TSSSGAL+C
Sbjct: 326 FENGASFIQSG-GIGKAKPNYNDQQKFEVADAKFVKSITSSSGALKC 371

[Close]
BLAST of Lsi02G000430 vs. TrEMBL
Match: G7KAU7_MEDTR (Pectate lyase OS=Medicago truncatula GN=MTR_5g019160 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 5.8e-154
Identity = 266/380 (70.00%), Postives = 311/380 (81.84%), Query Frame = 1 

Query: 8   FVLSLISLTLLSAAVSYSEAH---GLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMT 67
           FVL+++     ++  S+++     GLKMN IDRCWR NP WR++RQQLA CSVG+AGKMT
Sbjct: 13  FVLAVVITIFFTSKFSFAKQTKLMGLKMNMIDRCWRPNPEWRKHRQQLATCSVGYAGKMT 72

Query: 68  NNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFT 127
           NN+G+ +I+Y+VTDP+DDPINP+PGTLRYGA++I+ KVWITF+KDMNI L K LLISSFT
Sbjct: 73  NNIGKGIIQYKVTDPNDDPINPQPGTLRYGASVIQGKVWITFKKDMNIKLIKSLLISSFT 132

Query: 128 AIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDA 187
            IDGRG  VHI  NACLM+FKATNIIIH + IHHC+AQ  G VMGPN K+ISLG VDGDA
Sbjct: 133 TIDGRGVNVHIADNACLMIFKATNIIIHSIRIHHCKAQTPGMVMGPNGKVISLGQVDGDA 192

Query: 188 IRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRN 247
           IRLVTASK+W+DHNTLY CEDGLLDVTRGST++T+SNNWFR+QDKV+LLGHDDGYVRD N
Sbjct: 193 IRLVTASKIWIDHNTLYDCEDGLLDVTRGSTNVTVSNNWFREQDKVMLLGHDDGYVRDIN 252

Query: 248 MRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 307
           M+VTVVYNHFGPNCNQRMPRIR+GYAHVANNLY GW QYAIGGSM PS+KSE+NLFIA K
Sbjct: 253 MKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWMQYAIGGSMGPSLKSESNLFIAPK 312

Query: 308 --SKQIIW-STGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAK 367
             SK++ W   G     KW+FHSVRD FENGASFA I  G    KPNY+ +Q F V D K
Sbjct: 313 VGSKEVTWRKIGHGNGDKWEFHSVRDAFENGASFA-ISKGSRVPKPNYSKEQGFKVVDVK 372

Query: 368 WLRSLTSSSGALRCSSNSKC 382
            +R+LT SSGA +CS  S C
Sbjct: 373 SVRTLTRSSGAFQCSRTSIC 391

[Close]
BLAST of Lsi02G000430 vs. TrEMBL
Match: M5XAB2_PRUPE (Pectate lyase OS=Prunus persica GN=PRUPE_ppa016255mg PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 7.5e-154
Identity = 263/361 (72.85%), Postives = 301/361 (83.38%), Query Frame = 1 

Query: 25  SEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPI 84
           ++  GLK+N ID CWR N  WR NRQ+LA+CSVGF+GKM+NN+GR++I YQVTDPSD+ +
Sbjct: 37  TKVDGLKLNVIDGCWRWNSDWRSNRQELALCSVGFSGKMSNNIGRDVIYYQVTDPSDNAL 96

Query: 85  NPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVF 144
           +P+PGTLRYG TMIK K WITF++DM+I L KPLLISSFTAIDGRGA VHI GNACL+VF
Sbjct: 97  DPKPGTLRYGVTMIKGKKWITFQRDMHIRLDKPLLISSFTAIDGRGANVHIAGNACLLVF 156

Query: 145 KATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCE 204
           +A+NIIIHGL IHHCR Q    VMGP  KII +G VDGDAIRLVTASKVW+DHNTLY C+
Sbjct: 157 QASNIIIHGLRIHHCRPQPPSSVMGPEGKIIPIGQVDGDAIRLVTASKVWIDHNTLYECQ 216

Query: 205 DGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPR 264
           DGLLDVTRGST ITISNNWFRDQDKV+LLGHDDGY RD+NMRVTVVYNHFGPNCNQRMPR
Sbjct: 217 DGLLDVTRGSTHITISNNWFRDQDKVMLLGHDDGYFRDKNMRVTVVYNHFGPNCNQRMPR 276

Query: 265 IRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS---KQIIWSTGKV-EETKW 324
           IRYGYAHV NNLY+ W+QYAIGGSMNPSVKSEANLFIA KS   K+I W    + ++  W
Sbjct: 277 IRYGYAHVVNNLYREWSQYAIGGSMNPSVKSEANLFIAPKSGNKKEITWRKDSIGDKESW 336

Query: 325 KFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSK 382
           KF+SV D+FENGASF + G GR   KPNYN +Q FPV +AK +RSLT SSGAL C   S+
Sbjct: 337 KFYSVGDIFENGASFVETGAGR--AKPNYNREQTFPVVNAKSVRSLTRSSGALICIKRSR 395

[Close]
BLAST of Lsi02G000430 vs. TrEMBL
Match: M5XHD5_PRUPE (Pectate lyase OS=Prunus persica GN=PRUPE_ppa016917mg PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 2.2e-153
Identity = 271/383 (70.76%), Postives = 313/383 (81.72%), Query Frame = 1 

Query: 8   FVLSLISLTLLSAAVSYSEAH-----GLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGK 67
           FVL+L+ +T+ S A + S A      GLK+N ID CWR N  WRRNRQ+LA+CSVGF+GK
Sbjct: 16  FVLALL-ITIASFAPNPSFAKKTKVDGLKLNVIDGCWRWNSDWRRNRQELALCSVGFSGK 75

Query: 68  MTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISS 127
           M+NN+GR++I YQVT+PSD  ++P+PGTLRY  TMIK K WITFR+DM+I L KPLLISS
Sbjct: 76  MSNNIGRDVIYYQVTEPSDSALDPKPGTLRYAVTMIKGKKWITFRRDMHIRLDKPLLISS 135

Query: 128 FTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDG 187
           FTAIDGRGA+VHI GNACL+VF+A+NIIIHGL IHHCR Q    VMGP  KI+ +G VDG
Sbjct: 136 FTAIDGRGASVHIAGNACLLVFQASNIIIHGLRIHHCRPQPPSSVMGPEGKIMPIGQVDG 195

Query: 188 DAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 247
           DAIRLVTASKVW+DHNTLY C+DGLLDVTRGST ITISNNWFRDQDKV+LLGHDDGY RD
Sbjct: 196 DAIRLVTASKVWIDHNTLYECQDGLLDVTRGSTHITISNNWFRDQDKVMLLGHDDGYFRD 255

Query: 248 RNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 307
           +NMRVTVVYNHFGPNCNQRMPRIRYGYAHV NNLY+ W+QYAIGGSMNPSVKSEANLFIA
Sbjct: 256 KNMRVTVVYNHFGPNCNQRMPRIRYGYAHVVNNLYREWSQYAIGGSMNPSVKSEANLFIA 315

Query: 308 SKS---KQIIWSTGKV-EETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVA 367
            KS   K+I W    + ++  WKF+SV D+FENGASF + G GR   KPNYN +Q FPV 
Sbjct: 316 PKSGNKKEITWRKDSIGDKESWKFYSVGDIFENGASFVETGAGR--AKPNYNREQTFPVV 375

Query: 368 DAKWLRSLTSSSGALRCSSNSKC 382
           +AK +RSLT SSGAL C   S+C
Sbjct: 376 NAKSVRSLTRSSGALICIKRSRC 395

[Close]
BLAST of Lsi02G000430 vs. TAIR10
Match: AT5G09280.1 (AT5G09280.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 409.1 bits (1050), Expect = 3.1e-114
Identity = 184/255 (72.16%), Postives = 225/255 (88.24%), Query Frame = 1 

Query: 63  MTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISS 122
           MT N+G+ + +Y+VTDPSDDP+NP+PGTLRYGAT++K K WITF+++M I L KPLLISS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 123 FTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDG 182
           FTA+DGRGA+VHI+G ACL+V++AT++IIHGL IH C+A     VMGP+SKII LGH+DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 183 DAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 242
           DAIRLVTA KVW+DHNTLY CEDGLLDVT GSTD+T+SNNWFR+QDKV+LLGHDDGYV+D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 243 RNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 302
           ++MRVTVV+NHFGPNCNQRMPR+R+GYAHVANN YQGWTQYAIGGSM+P VKSE+N F+A
Sbjct: 181 KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA 240

Query: 303 SK--SKQIIWSTGKV 316
            K  SK+++   G +
Sbjct: 241 PKSGSKEVLEKHGPI 255

[Close]
BLAST of Lsi02G000430 vs. TAIR10
Match: AT1G11920.1 (AT1G11920.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-91
Identity = 173/384 (45.05%), Postives = 236/384 (61.46%), Query Frame = 1 

Query: 7   LFVLSLISLTLLSAAVSYSEAHG-----LKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAG 66
           L ++SL+     S+ V  + ++G     L  N ID CWR NPYW  NR+ LA C+VGF  
Sbjct: 6   LTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGK 65

Query: 67  KMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLIS 126
                   ++  Y VT+PSDDP NPRPGTLRY     KP +WITF +DM IVL+  L+++
Sbjct: 66  SAVGGKYGSI--YVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNELIMN 125

Query: 127 SFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVD 186
           S+  IDGRGA V I    C+ +   +++IIHG+ IH C+   +G+V    + + S    D
Sbjct: 126 SYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSD 185

Query: 187 GDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVR 246
           GDAI +  +S +W+DH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V 
Sbjct: 186 GDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVE 245

Query: 247 DRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFI 306
           D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F+
Sbjct: 246 DKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFV 305

Query: 307 ASKSKQIIWSTGKVEE----TKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPV 366
           AS        T +++      +WK+ + +DVF+NGA F  +  G G V P Y   +RFPV
Sbjct: 306 ASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFPV 365

Query: 367 ADAKWLRSLTSSSGALRCSSNSKC 382
           +    +  LTSS+G L C S   C
Sbjct: 366 SHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]
BLAST of Lsi02G000430 vs. TAIR10
Match: AT1G30350.1 (AT1G30350.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-88
Identity = 177/378 (46.83%), Postives = 231/378 (61.11%), Query Frame = 1 

Query: 9   VLSLISLTLLSAAVSYS-EAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNM 68
           +L+  +  LL  A SY+  A  + +N ID CWR NP W  NRQ LA C+VG+ GK     
Sbjct: 11  LLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG- 70

Query: 69  GRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAID 128
           G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVLK  L+I+S+  ID
Sbjct: 71  GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQLMINSYKTID 130

Query: 129 GRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRL 188
           GRGA V I    CL + +  ++IIHG+ IH C+A   G              +DGD IR+
Sbjct: 131 GRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRV 190

Query: 189 VTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRV 248
             ++ VW+DH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y+ D++MRV
Sbjct: 191 FQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRV 250

Query: 249 TVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQ 308
           T+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + + 
Sbjct: 251 TIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRS 310

Query: 309 IIWSTGKV----EETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWL 368
               T ++    +  +WK+ + RDVF NGA F   GV    V+P Y   + F VA    +
Sbjct: 311 SKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSLV 368

Query: 369 RSLTSSSGALRCSSNSKC 382
            SLTSS+G LRC     C
Sbjct: 371 PSLTSSAGPLRCYVGRIC 368

[Close]
BLAST of Lsi02G000430 vs. TAIR10
Match: AT4G22080.1 (AT4G22080.1 root hair specific 14)

HSP 1 Score: 318.2 bits (814), Expect = 7.1e-87
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 1 

Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L+  L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+    G V    + +      DGDAI +  +S +W+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Lsi02G000430 vs. TAIR10
Match: AT4G22090.1 (AT4G22090.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-86
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 1 

Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L   L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+   +G+V    + +      DGDAI +  +S VW+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Lsi02G000430 vs. NCBI nr
Match: gi|700208874|gb|KGN63970.1| (hypothetical protein Csa_1G031910 [Cucumis sativus])

HSP 1 Score: 722.2 bits (1863), Expect = 4.6e-205
Identity = 344/381 (90.29%), Postives = 368/381 (96.59%), Query Frame = 1 

Query: 2   TTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFA 61
           TTTQQL VLSLIS + L+S AVSYSEAHGL MNAIDRCWRSNPYWR+NRQQLA CSVGFA
Sbjct: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63

Query: 62  GKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLI 121
           GKMTNNMGRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL+
Sbjct: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123

Query: 122 SSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHV 181
           SSFTAIDGRG+TVHITGNACLMV +ATNIIIHGLIIHHC++QAAGQVMGPN+K+ISLG+V
Sbjct: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183

Query: 182 DGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241
           DGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243

Query: 242 RDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301
           RDR+MRVTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303

Query: 302 IASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADA 361
           IASKSKQ+IWSTGKVEE KWKFHSVRD FENGASFA+IGVG+G VKPNYN QQRFPVADA
Sbjct: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363

Query: 362 KWLRSLTSSSGALRCSSNSKC 382
           KW+R+LTSSSGALRC+SNSKC
Sbjct: 364 KWIRALTSSSGALRCTSNSKC 384

[Close]
BLAST of Lsi02G000430 vs. NCBI nr
Match: gi|659066329|ref|XP_008439120.1| (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 721.8 bits (1862), Expect = 6.0e-205
Identity = 348/382 (91.10%), Postives = 364/382 (95.29%), Query Frame = 1 

Query: 1   MTTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGF 60
           MT TQQL VLSLIS + L+S  VS SEAHGL MNAIDRCWRSNPYWRRNRQQLA CSVGF
Sbjct: 1   MTITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGF 60

Query: 61  AGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLL 120
           AGKMTNNMGRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL
Sbjct: 61  AGKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLL 120

Query: 121 ISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGH 180
           ISSFTAIDGRGATVHITGNACLMV +ATNIIIHGLIIHHCR+QAAG+VMGPNSK+ISLGH
Sbjct: 121 ISSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGH 180

Query: 181 VDGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240
           VDGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY
Sbjct: 181 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240

Query: 241 VRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300
           VRDRNM+VTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL
Sbjct: 241 VRDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300

Query: 301 FIASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVAD 360
           FIASKSKQ+IWSTG VEE KWKFHSVRDVFENGA F +IGVGRG VKPNYN QQRFPVAD
Sbjct: 301 FIASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVAD 360

Query: 361 AKWLRSLTSSSGALRCSSNSKC 382
           AKW+R+LTSSSGALRC+SNSKC
Sbjct: 361 AKWIRALTSSSGALRCTSNSKC 382

[Close]
BLAST of Lsi02G000430 vs. NCBI nr
Match: gi|778664740|ref|XP_004137574.2| (PREDICTED: putative pectate lyase 2 [Cucumis sativus])

HSP 1 Score: 620.5 bits (1599), Expect = 1.9e-174
Identity = 291/319 (91.22%), Postives = 312/319 (97.81%), Query Frame = 1 

Query: 63  MTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISS 122
           MTNNMGRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL+SS
Sbjct: 1   MTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSS 60

Query: 123 FTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDG 182
           FTAIDGRG+TVHITGNACLMV +ATNIIIHGLIIHHC++QAAGQVMGPN+K+ISLG+VDG
Sbjct: 61  FTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDG 120

Query: 183 DAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 242
           DAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD
Sbjct: 121 DAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 180

Query: 243 RNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 302
           R+MRVTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA
Sbjct: 181 RSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 240

Query: 303 SKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKW 362
           SKSKQ+IWSTGKVEE KWKFHSVRD FENGASFA+IGVG+G VKPNYN QQRFPVADAKW
Sbjct: 241 SKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKW 300

Query: 363 LRSLTSSSGALRCSSNSKC 382
           +R+LTSSSGALRC+SNSKC
Sbjct: 301 IRALTSSSGALRCTSNSKC 319

[Close]
BLAST of Lsi02G000430 vs. NCBI nr
Match: gi|502082100|ref|XP_004487065.1| (PREDICTED: probable pectate lyase 4 [Cicer arietinum])

HSP 1 Score: 555.4 bits (1430), Expect = 7.5e-155
Identity = 270/382 (70.68%), Postives = 311/382 (81.41%), Query Frame = 1 

Query: 8   FVLSLISLTLLS---AAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMT 67
           FVL+++ + + +   ++   S+  GLKMN IDRCWR NP WRR RQQLA CS+G+ GKM 
Sbjct: 13  FVLAVVVIVIFTPKFSSAKQSKLVGLKMNMIDRCWRPNPEWRRYRQQLAFCSIGYVGKMI 72

Query: 68  NNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFT 127
           NN+G +LI Y+V D +DDPINP+PGTLRYGA++I+ KVWITF+KDMNI L KPLLISSFT
Sbjct: 73  NNVGNDLIHYKVIDSNDDPINPKPGTLRYGASVIQGKVWITFQKDMNIKLMKPLLISSFT 132

Query: 128 AIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDA 187
            IDGRGATVHI  NACLM++K TNIIIH + IHHC+AQA G VMGPN K+ISLG VDGDA
Sbjct: 133 TIDGRGATVHIADNACLMIYKTTNIIIHNIRIHHCKAQAPGMVMGPNGKVISLGQVDGDA 192

Query: 188 IRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRN 247
           IRLVTASK+W+DHNTLY CEDGLLDVTRGSTD+TISNNWFR+QDKV+LLGHDDGYVRD+N
Sbjct: 193 IRLVTASKIWIDHNTLYSCEDGLLDVTRGSTDVTISNNWFREQDKVMLLGHDDGYVRDKN 252

Query: 248 MRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 307
           M+VTVVYNHFGPNCNQRMPRIR+GYAHVANNLY GW QYAIGGSM PS+KSEANLFIA K
Sbjct: 253 MKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWMQYAIGGSMGPSLKSEANLFIAPK 312

Query: 308 --SKQIIW-STGKVEETKWKFHSVRDVFENGASFAQIGVGRGG--VKPNYNAQQRFPVAD 367
             SK++ W   G     KW+F+SVRD FENGASF    V +GG   KPNYN +Q F V D
Sbjct: 313 VGSKEVTWRKDGYKNVDKWEFYSVRDAFENGASFV---VTKGGSVPKPNYNKEQGFKVVD 372

Query: 368 AKWLRSLTSSSGALRCSSNSKC 382
            K +RSLT SSGA RCS  S C
Sbjct: 373 VKSVRSLTRSSGAFRCSRTSIC 391

[Close]
BLAST of Lsi02G000430 vs. NCBI nr
Match: gi|643734841|gb|KDP41511.1| (hypothetical protein JCGZ_15918 [Jatropha curcas])

HSP 1 Score: 553.9 bits (1426), Expect = 2.2e-154
Identity = 254/347 (73.20%), Postives = 301/347 (86.74%), Query Frame = 1 

Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           +NAID CWR NP+WRR+RQQLA CS+GFAGKM NN+G+N+IRY+VTDPSDDP+NP+PGTL
Sbjct: 26  INAIDSCWRQNPHWRRSRQQLAKCSIGFAGKMINNIGKNVIRYKVTDPSDDPLNPKPGTL 85

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYGAT+IK KVWITF+K+M+I L KPLLISSFTA+DGRG ++HITGNACL+++K +N+II
Sbjct: 86  RYGATLIKEKVWITFQKNMHIKLDKPLLISSFTALDGRGVSIHITGNACLLLYKVSNVII 145

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HGL IHHC+A A G V GP+ KI+ L  +DGDAIRLVTASKVW+DHNTLY C+DGLLDVT
Sbjct: 146 HGLNIHHCKASAPGSVRGPDGKIMPLSQMDGDAIRLVTASKVWIDHNTLYACQDGLLDVT 205

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
           RGST  TISNNWFRDQDKV+LLGHDDGY RD+NM+VTVVYNHFGPNCNQRMPR+RYGYAH
Sbjct: 206 RGSTSTTISNNWFRDQDKVMLLGHDDGYFRDKNMKVTVVYNHFGPNCNQRMPRVRYGYAH 265

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS--KQIIWSTGKVEETK-WKFHSVRDV 331
           V NN YQGW QYAIGGSMNPS+KSEAN F+  KS  K++ W  G  E+++ W F+S RD+
Sbjct: 266 VVNNFYQGWEQYAIGGSMNPSIKSEANCFVPLKSGKKEVTWRNGINEKSQPWNFYSSRDI 325

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRC 376
           FENGASF Q G G G  KPNYN QQ+F VADAK+++S+TSSSGAL+C
Sbjct: 326 FENGASFIQSG-GIGKAKPNYNDQQKFEVADAKFVKSITSSSGALKC 371

The following BLAST results are available for this feature:
BLAST of Lsi02G000430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLY2_ARATH2.2e-9045.05Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2[more]
PLY4_ARATH3.0e-8746.83Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1[more]
PLY16_ARATH1.3e-8545.89Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1[more]
PLY17_ARATH2.1e-8545.89Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1[more]
PLY9_ARATH1.0e-8245.07Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1[more]
BLAST of Lsi02G000430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPZ1_CUCSA3.2e-20590.29Pectate lyase OS=Cucumis sativus GN=Csa_1G031910 PE=3 SV=1[more]
A0A067KZ75_JATCU1.5e-15473.20Pectate lyase OS=Jatropha curcas GN=JCGZ_15918 PE=3 SV=1[more]
G7KAU7_MEDTR5.8e-15470.00Pectate lyase OS=Medicago truncatula GN=MTR_5g019160 PE=3 SV=1[more]
M5XAB2_PRUPE7.5e-15472.85Pectate lyase OS=Prunus persica GN=PRUPE_ppa016255mg PE=3 SV=1[more]
M5XHD5_PRUPE2.2e-15370.76Pectate lyase OS=Prunus persica GN=PRUPE_ppa016917mg PE=3 SV=1[more]
BLAST of Lsi02G000430 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09280.13.1e-11472.16 Pectin lyase-like superfamily protein[more]
AT1G11920.11.2e-9145.05 Pectin lyase-like superfamily protein[more]
AT1G30350.11.7e-8846.83 Pectin lyase-like superfamily protein[more]
AT4G22080.17.1e-8745.89 root hair specific 14[more]
AT4G22090.11.2e-8645.89 Pectin lyase-like superfamily protein[more]
BLAST of Lsi02G000430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208874|gb|KGN63970.1|4.6e-20590.29hypothetical protein Csa_1G031910 [Cucumis sativus][more]
gi|659066329|ref|XP_008439120.1|6.0e-20591.10PREDICTED: putative pectate lyase 2 [Cucumis melo][more]
gi|778664740|ref|XP_004137574.2|1.9e-17491.22PREDICTED: putative pectate lyase 2 [Cucumis sativus][more]
gi|502082100|ref|XP_004487065.1|7.5e-15570.68PREDICTED: probable pectate lyase 4 [Cicer arietinum][more]
gi|643734841|gb|KDP41511.1|2.2e-15473.20hypothetical protein JCGZ_15918 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018082AmbAllergen
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR002022Pec_lyase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045490 pectin catabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0030570 pectate lyase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043167 ion binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G000430.1Lsi02G000430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002022Pectate lyase/Amb allergenPFAMPF00544Pec_lyase_Ccoord: 122..300
score: 1.3
IPR002022Pectate lyase/Amb allergenSMARTSM00656amb_allcoord: 109..306
score: 3.0
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 32..372
score: 4.24
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 33..372
score: 4.0
IPR018082AmbAllergenPRINTSPR00807AMBALLERGENcoord: 55..72
score: 2.9E-34coord: 261..280
score: 2.9E-34coord: 181..202
score: 2.9E-34coord: 283..302
score: 2.9E-34coord: 117..133
score: 2.9E-34coord: 352..375
score: 2.9
NoneNo IPR availablePANTHERPTHR31683FAMILY NOT NAMEDcoord: 1..381
score: 1.6E
NoneNo IPR availablePANTHERPTHR31683:SF8MAJOR POLLEN ALLERGEN-LIKE PROTEINcoord: 1..381
score: 1.6E