CmoCh01G008050 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G008050
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPectate lyase (4.2.2.2)
LocationCmo_Chr01 : 4233678 .. 4235670 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTCAGCTCATTATCCTGTCGCTCATTTCCGTGGCACTCCTCGCTGCCGTTTCCCACACCGAAGCCCGCGCCATGAACATGAACGCTATCGACCGATGCTGGCGACCGAACCCATACTGGAGAAAAAACAGGCAAAAGCTCGCCCTTTGTTCAATTGGGTTCGTCGGAAAAATGACCAACAACATCGGAAGAAACCTCGTACACTACCAAGTCACGGACCCCAGCGACGACCCACTAACCCCACGCCCAGGCACCCTCAGATACGGCGCCACAATGATCAAACCCAAAGTGTGGATCACGTTTCAAAAAGACATGCACATTGTGCTCAACAAGCCGCTTATTATTAGCAGCTACACGGCCATCGACGGCCGTGGCGCCACCGTGCACATCACGGGGAATGCGTGTCTGATGGTGTCTAGAGCCACCAATGTCATAATCCATGGGCTTATTATCCACCATTGCAAGGCCCAGGCGGCTGGCCGTGTAATGGGGCCGGGTTCGAAGATCGTTTCGTTGGGACACGTGGACGGTGATGCCATTCGTTTGGTTAGTGCTTCTAAGATTTGGATTGACCATAACACGCTGTATCGGTGTGAGGATGGGCTGATTGATGTCACTAGAGGCTCTACTGATATCACCATTTCTAACAATTGGTTGAGAGATCAAGATAAGGTTATACTTTTGGGTCACGACGATGATTATTTTCGGGACCGAAACATGAAGGTTACTCTCGTTTATAACCATTTCGGACCTAATTGCAACCAACGGATGCCCAGGTAACATTTAACACGGTATCAAAACATAACATAAATTTTAAGATTAAATTAATAAAAATATTTGTAAATTTTGTATTTTATCTTAAAAATACTCTTTAAATTTTTCAAATTTTTTAATAATATTCTTAAACTAAAAAATACGTTAAACTTTAGAATAAATTAAAAAAAATATCTTCATTGTTAATTTTGGAGGAAAACTACTAATAATTTGTTTTAAAACATGCTAAAAAAAAGTTTAAAAAATATCTTTCTTAAGTTTTATTGATATCGAGCCTTTTTTAAAAAAAAAAAATTAATTTTTTTAAAAAGTTAAAAAATAATTCATATATGGACGAAATTGTTAGTACCTTTAAAAACAATAACTAAAAATTTTAATACGGTACTCTTAAAATTGAAGATAGAGATGACATATGCCTTAAAATTGAAGATAGAGATGACATATGAGGTATAGATAGACATTTTCCGTTACAATAATAACTTTTTAATTTTATTTTACAAAAGTTCACGGATAATTATTAAATATAGTATTAATGGTAAGAGTATTTTTCAGTTTTTTTACTTGAAAAGTACAACGAAACTTTTAAAAATTCAAAGATATTTTGAAATAAATTATTAACGGTAACTATATTTTTTAAAGTTTAAAGGTAATATTGAAATTCTTATAAATTTATAATTTTGAGACATAATATAAAGTTTACGGATATTTTCTTTTTTATTAATTTAACAAAATTTGGTATGAAAATACAGGATTCGATACGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACACAATACGCAATTGGAGGCAGCATGAATCCTAGTGTGAAGAGTGAAGCCAACCTTTTCATAGCATCGAAATCAAAACAGGCAATAATAATAACAACAACAATATATCAAAACTCCATATTTGGTTAAAAAATTGAGCCTTTTCTTACCAAACAACAACAAATGCTTATTTGAAAATCATAAAATGCAGATCATATGGAGCACAGGCAAAGTAGAGAACGCCAAGTGGAAGTTCCATTCAGTAAGAGACGTTTTTGAAAACGGCGCTTCCTTCGCACAGATCGGCGCTGGCCGAGGCGGTGTCAAGCCAAATTACAATGCCCTGCAGCGCTTCCCAGTGGTAGACGCCAAGTGGTTGCGGTCATTGACAAGCTCTTCCGGCGCCCTGCGCTGCTCACCACGCTCAAGGTGTTGA

mRNA sequence

ATGGCCACTCAGCTCATTATCCTGTCGCTCATTTCCGTGGCACTCCTCGCTGCCGTTTCCCACACCGAAGCCCGCGCCATGAACATGAACGCTATCGACCGATGCTGGCGACCGAACCCATACTGGAGAAAAAACAGGCAAAAGCTCGCCCTTTGTTCAATTGGGTTCGTCGGAAAAATGACCAACAACATCGGAAGAAACCTCGTACACTACCAAGTCACGGACCCCAGCGACGACCCACTAACCCCACGCCCAGGCACCCTCAGATACGGCGCCACAATGATCAAACCCAAAGTGTGGATCACGTTTCAAAAAGACATGCACATTGTGCTCAACAAGCCGCTTATTATTAGCAGCTACACGGCCATCGACGGCCGTGGCGCCACCGTGCACATCACGGGGAATGCGTGTCTGATGGTGTCTAGAGCCACCAATGTCATAATCCATGGGCTTATTATCCACCATTGCAAGGCCCAGGCGGCTGGCCGTGTAATGGGGCCGGGTTCGAAGATCGTTTCGTTGGGACACGTGGACGGTGATGCCATTCGTTTGGTTAGTGCTTCTAAGATTTGGATTGACCATAACACGCTGTATCGGTGTGAGGATGGGCTGATTGATGTCACTAGAGGCTCTACTGATATCACCATTTCTAACAATTGGTTGAGAGATCAAGATAAGGTTATACTTTTGGGTCACGACGATGATTATTTTCGGGACCGAAACATGAAGATCATATGGAGCACAGGCAAAGTAGAGAACGCCAAGTGGAAGTTCCATTCAGTAAGAGACGTTTTTGAAAACGGCGCTTCCTTCGCACAGATCGGCGCTGGCCGAGGCGGTGTCAAGCCAAATTACAATGCCCTGCAGCGCTTCCCAGTGGTAGACGCCAAGTGGTTGCGGTCATTGACAAGCTCTTCCGGCGCCCTGCGCTGCTCACCACGCTCAAGGTGTTGA

Coding sequence (CDS)

ATGGCCACTCAGCTCATTATCCTGTCGCTCATTTCCGTGGCACTCCTCGCTGCCGTTTCCCACACCGAAGCCCGCGCCATGAACATGAACGCTATCGACCGATGCTGGCGACCGAACCCATACTGGAGAAAAAACAGGCAAAAGCTCGCCCTTTGTTCAATTGGGTTCGTCGGAAAAATGACCAACAACATCGGAAGAAACCTCGTACACTACCAAGTCACGGACCCCAGCGACGACCCACTAACCCCACGCCCAGGCACCCTCAGATACGGCGCCACAATGATCAAACCCAAAGTGTGGATCACGTTTCAAAAAGACATGCACATTGTGCTCAACAAGCCGCTTATTATTAGCAGCTACACGGCCATCGACGGCCGTGGCGCCACCGTGCACATCACGGGGAATGCGTGTCTGATGGTGTCTAGAGCCACCAATGTCATAATCCATGGGCTTATTATCCACCATTGCAAGGCCCAGGCGGCTGGCCGTGTAATGGGGCCGGGTTCGAAGATCGTTTCGTTGGGACACGTGGACGGTGATGCCATTCGTTTGGTTAGTGCTTCTAAGATTTGGATTGACCATAACACGCTGTATCGGTGTGAGGATGGGCTGATTGATGTCACTAGAGGCTCTACTGATATCACCATTTCTAACAATTGGTTGAGAGATCAAGATAAGGTTATACTTTTGGGTCACGACGATGATTATTTTCGGGACCGAAACATGAAGATCATATGGAGCACAGGCAAAGTAGAGAACGCCAAGTGGAAGTTCCATTCAGTAAGAGACGTTTTTGAAAACGGCGCTTCCTTCGCACAGATCGGCGCTGGCCGAGGCGGTGTCAAGCCAAATTACAATGCCCTGCAGCGCTTCCCAGTGGTAGACGCCAAGTGGTTGCGGTCATTGACAAGCTCTTCCGGCGCCCTGCGCTGCTCACCACGCTCAAGGTGTTGA
Homology
[Close]
BLAST of CmoCh01G008050 vs. Swiss-Prot
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 6.6e-56
Identity = 123/286 (43.01%), Postives = 163/286 (56.99%), Query Frame = 1 

Query: 30  NAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPS-DDPLTPRPGTL 89
           N ID CWR +P W  NRQ+LA C+IGF GK     GR    Y VTDP+ DDP+ PRPGTL
Sbjct: 64  NPIDDCWRCDPNWETNRQRLADCAIGF-GKNAIG-GRKGRIYVVTDPANDDPVNPRPGTL 123

Query: 90  RYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVII 149
           RY  T  +P +WI F++DM I L K LII+S+  IDGRG++VHIT   CL +  ATN+II
Sbjct: 124 RYAVTQEEP-LWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIII 183

Query: 150 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 209
           HG+ IH CK  + G +             DGDA+ +     +WIDH +L  C+DGLID  
Sbjct: 184 HGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAI 243

Query: 210 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKII-----WSTGKVENAKWKFHSVRD 269
            GST ITISNN +   DKV+LLGH D Y +D+NM++      +  G V+      H    
Sbjct: 244 HGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH 303

Query: 270 VFENGASFAQIGAGRGGVKPN-YNALQRFPVVDAKWLRSLTSSSGA 309
           V  N  +  ++ A  G   P  Y+   RF   + ++ + +T    A
Sbjct: 304 VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDA 346

[Close]
BLAST of CmoCh01G008050 vs. Swiss-Prot
Match: PLY14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 7.3e-55
Identity = 120/286 (41.96%), Postives = 160/286 (55.94%), Query Frame = 1 

Query: 30  NAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSD-DPLTPRPGTL 89
           N ID CWR +  W + R++LA C+IGF        GR+  +Y VTDPSD DP+TP+PGTL
Sbjct: 90  NPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVG--GRDGRYYIVTDPSDHDPVTPKPGTL 149

Query: 90  RYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVII 149
           RY     +P +WI F++DM I L++ LI++S+  IDGRG  VHI G ACL V   TN+II
Sbjct: 150 RYAVIQDEP-LWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIII 209

Query: 150 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 209
           HG+ IH CK      V    S        DGD I +  +S IWIDHN+L  C DGLID  
Sbjct: 210 HGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAI 269

Query: 210 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKII-----WSTGKVENAKWKFHSVRD 269
            GST ITISNN+L   ++ ILLGH D Y RD+ M++      +  G ++      H    
Sbjct: 270 MGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFH 329

Query: 270 VFENGASFAQIGAGRGGVKPNYNAL-QRFPVVDAKWLRSLTSSSGA 309
           V  N  +  ++ A  G   P  N+   RF     ++ + +T   GA
Sbjct: 330 VVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGA 372

[Close]
BLAST of CmoCh01G008050 vs. Swiss-Prot
Match: PLY4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.6e-54
Identity = 115/250 (46.00%), Postives = 152/250 (60.80%), Query Frame = 1 

Query: 1   MATQLIILSLISVALLAAVSHTE------ARAMNMNAIDRCWRPNPYWRKNRQKLALCSI 60
           MA+ ++I+SL+  A  + +  T       A  +++N ID CWR NP W  NRQ LA C++
Sbjct: 1   MASLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAV 60

Query: 61  GFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKP 120
           G+ GK     G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVL   
Sbjct: 61  GY-GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQ 120

Query: 121 LIISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSL 180
           L+I+SY  IDGRGA V I    CL + +  +VIIHG+ IH CKA   G            
Sbjct: 121 LMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG------------ 180

Query: 181 GHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDD 240
             +DGD IR+  ++ +WIDH  L RC DGLIDV   ST +TISNN+    DKV+LLGHDD
Sbjct: 181 --MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDD 233

Query: 241 DYFRDRNMKI 245
            Y  D++M++
Sbjct: 241 SYMGDKDMRV 233

[Close]
BLAST of CmoCh01G008050 vs. Swiss-Prot
Match: PLY9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.7e-54
Identity = 115/266 (43.23%), Postives = 152/266 (57.14%), Query Frame = 1 

Query: 28  NMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLT-PRPG 87
           N N ID CWR +  W KNR+ LA C +GF  K     GRN  +Y VTD SDD +  P+PG
Sbjct: 102 NGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFG--GRNGSYYVVTDHSDDDVVNPKPG 161

Query: 88  TLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNV 147
           TLR+    ++P +WI F++DM I L + LI++S+  ID RGA VHI   AC+ +   TNV
Sbjct: 162 TLRHAVIQVEP-LWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNV 221

Query: 148 IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID 207
           I+HGL IH CK      V    S+    G  DGDAI +  +S IWIDHN+L  C DGL+D
Sbjct: 222 IVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVD 281

Query: 208 VTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKII-----WSTGKVENAKWKFHSV 267
           V  GST ITISNN     D+V+LLGH+D Y RD+ M++      +  G ++      H  
Sbjct: 282 VVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGY 341

Query: 268 RDVFENGASFAQIGAGRGGVKPNYNA 288
             V  N  +  ++ A  G   P  N+
Sbjct: 342 FHVVNNDYTHWKMYAIGGSANPTINS 364

[Close]
BLAST of CmoCh01G008050 vs. Swiss-Prot
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.2e-54
Identity = 118/286 (41.26%), Postives = 160/286 (55.94%), Query Frame = 1 

Query: 30  NAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDP-SDDPLTPRPGTL 89
           N ID CWR +P W  NRQ+LA C+IGF GK     GRN   Y VTDP +DDP+ P PGTL
Sbjct: 53  NPIDDCWRCDPNWANNRQRLADCAIGF-GKNAMG-GRNGRIYVVTDPGNDDPVNPVPGTL 112

Query: 90  RYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVII 149
           RY     +P +WI F++DM I L + L+++S+  IDGRG  VHI    C+ +  A+N+II
Sbjct: 113 RYAVIQDEP-LWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIII 172

Query: 150 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 209
           HG+ IH CK    G +             DGD I + ++  IWIDHN+L  C DGLID  
Sbjct: 173 HGIHIHDCKQAGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAI 232

Query: 210 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKII-----WSTGKVENAKWKFHSVRD 269
            GST ITISNN++   DKV+LLGH D Y +D+NM++      +  G V+      H    
Sbjct: 233 HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH 292

Query: 270 VFENGASFAQIGAGRGGVKPN-YNALQRFPVVDAKWLRSLTSSSGA 309
           V  N  +  ++ A  G   P  Y+   RF   + ++ + +T    A
Sbjct: 293 VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENA 335

[Close]
BLAST of CmoCh01G008050 vs. TrEMBL
Match: A0A0A0LPZ1_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.2e-115
Identity = 197/243 (81.07%), Postives = 224/243 (92.18%), Query Frame = 1 

Query: 4   QLIILSLISVALL--AAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 63
           QL +LSLIS  LL   AVS++EA  +NMNAIDRCWR NPYWRKNRQ+LA CS+GF GKMT
Sbjct: 8   QLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMT 67

Query: 64  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYT 123
           NN+GRNL+HYQVTDPSDDP+ PRPGTLRYGATMIK KVWITF+KDMHIVL KPL++SS+T
Sbjct: 68  NNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFT 127

Query: 124 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 183
           AIDGRG+TVHITGNACLMV RATN+IIHGLIIHHCK+QAAG+VMGP +K++SLG+VDGDA
Sbjct: 128 AIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDA 187

Query: 184 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 243
           IRLV+ASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGHDD Y RDR+
Sbjct: 188 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRS 247

Query: 244 MKI 245
           M++
Sbjct: 248 MRV 250

[Close]
BLAST of CmoCh01G008050 vs. TrEMBL
Match: A0A067KZ75_JATCU (Pectate lyase OS=Jatropha curcas GN=JCGZ_15918 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.6e-96
Identity = 159/217 (73.27%), Postives = 190/217 (87.56%), Query Frame = 1 

Query: 28  NMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGT 87
           N+NAID CWR NP+WR++RQ+LA CSIGF GKM NNIG+N++ Y+VTDPSDDPL P+PGT
Sbjct: 25  NINAIDSCWRQNPHWRRSRQQLAKCSIGFAGKMINNIGKNVIRYKVTDPSDDPLNPKPGT 84

Query: 88  LRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVI 147
           LRYGAT+IK KVWITFQK+MHI L+KPL+ISS+TA+DGRG ++HITGNACL++ + +NVI
Sbjct: 85  LRYGATLIKEKVWITFQKNMHIKLDKPLLISSFTALDGRGVSIHITGNACLLLYKVSNVI 144

Query: 148 IHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDV 207
           IHGL IHHCKA A G V GP  KI+ L  +DGDAIRLV+ASK+WIDHNTLY C+DGL+DV
Sbjct: 145 IHGLNIHHCKASAPGSVRGPDGKIMPLSQMDGDAIRLVTASKVWIDHNTLYACQDGLLDV 204

Query: 208 TRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKI 245
           TRGST  TISNNW RDQDKV+LLGHDD YFRD+NMK+
Sbjct: 205 TRGSTSTTISNNWFRDQDKVMLLGHDDGYFRDKNMKV 241

[Close]
BLAST of CmoCh01G008050 vs. TrEMBL
Match: K7LNC8_SOYBN (Pectate lyase OS=Glycine max GN=GLYMA_11G063300 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.0e-96
Identity = 159/240 (66.25%), Postives = 198/240 (82.50%), Query Frame = 1 

Query: 5   LIILSLISVALLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNI 64
           +I++  +    L+A   ++   + MN IDRCWR NP WR++R +LA CS+G+ GKMTNNI
Sbjct: 16  IIVIITLYTPNLSAAKQSKINGLKMNVIDRCWRLNPEWRRHRPQLATCSVGYTGKMTNNI 75

Query: 65  GRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAID 124
           G++L+HY V DPSDDP+ P+ GTLRYGA++I+ KVWITFQ+DMHI L +PL+ISS+TAID
Sbjct: 76  GKDLIHYIVIDPSDDPINPKRGTLRYGASVIQGKVWITFQRDMHIKLERPLLISSFTAID 135

Query: 125 GRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRL 184
           GRG  VHI  NACLM+ +ATN+IIHG+ +HHCK QA G VMGP  K++ LGHVDGDAIRL
Sbjct: 136 GRGVNVHIANNACLMIFKATNIIIHGIRVHHCKPQAPGVVMGPEGKVIPLGHVDGDAIRL 195

Query: 185 VSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKI 244
           V+ASKIWIDHNTLY C+DGL+DVTRGSTD+TISNNW RDQDKV+LLGHDD Y RD+NMK+
Sbjct: 196 VTASKIWIDHNTLYNCQDGLLDVTRGSTDVTISNNWFRDQDKVMLLGHDDGYVRDQNMKV 255

[Close]
BLAST of CmoCh01G008050 vs. TrEMBL
Match: A0A0B2SCK6_GLYSO (Pectate lyase OS=Glycine soja GN=glysoja_003759 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.3e-95
Identity = 157/216 (72.69%), Postives = 187/216 (86.57%), Query Frame = 1 

Query: 29  MNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTL 88
           MN IDRCWR NP WR++R +LA CS+G+ GKMTNNIG++L+HY V DPSDDP+ P+ GTL
Sbjct: 1   MNVIDRCWRLNPEWRRHRPQLATCSVGYTGKMTNNIGKDLIHYIVIDPSDDPINPKRGTL 60

Query: 89  RYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVII 148
           RYGA++I+ KVWITFQ+DMHI L +PL+ISS+TAIDGRG  VHI  NACLM+ +ATN+II
Sbjct: 61  RYGASVIQGKVWITFQRDMHIKLERPLLISSFTAIDGRGVNVHIANNACLMIFKATNIII 120

Query: 149 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 208
           HG+ +HHCK QA G VMGP  K++ LGHVDGDAIRLV+ASKIWIDHNTLY C+DGL+DVT
Sbjct: 121 HGIRVHHCKPQAPGVVMGPEGKVIPLGHVDGDAIRLVTASKIWIDHNTLYNCQDGLLDVT 180

Query: 209 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKI 245
           RGSTD+TISNNW RDQDKV+LLGHDD Y RD+NMKI
Sbjct: 181 RGSTDVTISNNWFRDQDKVMLLGHDDGYVRDQNMKI 216

[Close]
BLAST of CmoCh01G008050 vs. TrEMBL
Match: G7K488_MEDTR (Pectate lyase OS=Medicago truncatula GN=MTR_5g035840 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.6e-95
Identity = 157/239 (65.69%), Postives = 197/239 (82.43%), Query Frame = 1 

Query: 6   IILSLISVALLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIG 65
           I++++   +  +    ++   + MN IDRCWRPNP WRK+RQ+LA CS+G+ GKMTNNIG
Sbjct: 17  IVITIFFTSKFSFAKQSKLMGLKMNMIDRCWRPNPEWRKHRQQLATCSVGYAGKMTNNIG 76

Query: 66  RNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDG 125
           + L HY+VTDP+DDP+ P+PGTLRYGA++I+ KVWITF+KDM+I L KPL+ISS+T IDG
Sbjct: 77  KGLTHYKVTDPNDDPIKPQPGTLRYGASVIQGKVWITFKKDMNIKLIKPLLISSFTTIDG 136

Query: 126 RGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLV 185
           RG  VHI  NACLM+S+AT++IIH + IHHCKAQ  G VMGP  K++ LG VDGDAIRLV
Sbjct: 137 RGVNVHIADNACLMISKATDIIIHSIRIHHCKAQTPGMVMGPNGKVIHLGQVDGDAIRLV 196

Query: 186 SASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKI 245
           +ASKIWIDHNTLY CEDGL+DVTRGST++T+SNNW R+QDKV+LLGHDD Y RD NMK+
Sbjct: 197 TASKIWIDHNTLYDCEDGLLDVTRGSTNVTVSNNWFREQDKVMLLGHDDGYLRDINMKV 255

[Close]
BLAST of CmoCh01G008050 vs. TAIR10
Match: AT5G09280.1 (AT5G09280.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-77
Identity = 128/185 (69.19%), Postives = 159/185 (85.95%), Query Frame = 1 

Query: 60  MTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISS 119
           MT NIG+ +  Y+VTDPSDDPL P+PGTLRYGAT++K K WITF+++M I L+KPL+ISS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 120 YTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDG 179
           +TA+DGRGA+VHI+G ACL+V RAT+VIIHGL IH CKA     VMGP SKI+ LGH+DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 180 DAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRD 239
           DAIRLV+A K+WIDHNTLY CEDGL+DVT GSTD+T+SNNW R+QDKV+LLGHDD Y +D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 240 RNMKI 245
           ++M++
Sbjct: 181 KDMRV 185

[Close]
BLAST of CmoCh01G008050 vs. TAIR10
Match: AT3G27400.1 (AT3G27400.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 219.2 bits (557), Expect = 3.7e-57
Identity = 123/286 (43.01%), Postives = 163/286 (56.99%), Query Frame = 1 

Query: 30  NAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPS-DDPLTPRPGTL 89
           N ID CWR +P W  NRQ+LA C+IGF GK     GR    Y VTDP+ DDP+ PRPGTL
Sbjct: 64  NPIDDCWRCDPNWETNRQRLADCAIGF-GKNAIG-GRKGRIYVVTDPANDDPVNPRPGTL 123

Query: 90  RYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVII 149
           RY  T  +P +WI F++DM I L K LII+S+  IDGRG++VHIT   CL +  ATN+II
Sbjct: 124 RYAVTQEEP-LWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIII 183

Query: 150 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 209
           HG+ IH CK  + G +             DGDA+ +     +WIDH +L  C+DGLID  
Sbjct: 184 HGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAI 243

Query: 210 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKII-----WSTGKVENAKWKFHSVRD 269
            GST ITISNN +   DKV+LLGH D Y +D+NM++      +  G V+      H    
Sbjct: 244 HGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH 303

Query: 270 VFENGASFAQIGAGRGGVKPN-YNALQRFPVVDAKWLRSLTSSSGA 309
           V  N  +  ++ A  G   P  Y+   RF   + ++ + +T    A
Sbjct: 304 VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDA 346

[Close]
BLAST of CmoCh01G008050 vs. TAIR10
Match: AT4G13210.2 (AT4G13210.2 Pectin lyase-like superfamily protein)

HSP 1 Score: 215.7 bits (548), Expect = 4.1e-56
Identity = 120/286 (41.96%), Postives = 160/286 (55.94%), Query Frame = 1 

Query: 30  NAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSD-DPLTPRPGTL 89
           N ID CWR +  W + R++LA C+IGF        GR+  +Y VTDPSD DP+TP+PGTL
Sbjct: 90  NPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVG--GRDGRYYIVTDPSDHDPVTPKPGTL 149

Query: 90  RYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVII 149
           RY     +P +WI F++DM I L++ LI++S+  IDGRG  VHI G ACL V   TN+II
Sbjct: 150 RYAVIQDEP-LWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIII 209

Query: 150 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 209
           HG+ IH CK      V    S        DGD I +  +S IWIDHN+L  C DGLID  
Sbjct: 210 HGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAI 269

Query: 210 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKII-----WSTGKVENAKWKFHSVRD 269
            GST ITISNN+L   ++ ILLGH D Y RD+ M++      +  G ++      H    
Sbjct: 270 MGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFH 329

Query: 270 VFENGASFAQIGAGRGGVKPNYNAL-QRFPVVDAKWLRSLTSSSGA 309
           V  N  +  ++ A  G   P  N+   RF     ++ + +T   GA
Sbjct: 330 VVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGA 372

[Close]
BLAST of CmoCh01G008050 vs. TAIR10
Match: AT1G30350.1 (AT1G30350.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-55
Identity = 115/250 (46.00%), Postives = 152/250 (60.80%), Query Frame = 1 

Query: 1   MATQLIILSLISVALLAAVSHTE------ARAMNMNAIDRCWRPNPYWRKNRQKLALCSI 60
           MA+ ++I+SL+  A  + +  T       A  +++N ID CWR NP W  NRQ LA C++
Sbjct: 1   MASLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAV 60

Query: 61  GFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKP 120
           G+ GK     G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVL   
Sbjct: 61  GY-GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQ 120

Query: 121 LIISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSL 180
           L+I+SY  IDGRGA V I    CL + +  +VIIHG+ IH CKA   G            
Sbjct: 121 LMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG------------ 180

Query: 181 GHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDD 240
             +DGD IR+  ++ +WIDH  L RC DGLIDV   ST +TISNN+    DKV+LLGHDD
Sbjct: 181 --MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDD 233

Query: 241 DYFRDRNMKI 245
            Y  D++M++
Sbjct: 241 SYMGDKDMRV 233

[Close]
BLAST of CmoCh01G008050 vs. TAIR10
Match: AT3G24230.1 (AT3G24230.1 Pectate lyase family protein)

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-55
Identity = 115/266 (43.23%), Postives = 152/266 (57.14%), Query Frame = 1 

Query: 28  NMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLT-PRPG 87
           N N ID CWR +  W KNR+ LA C +GF  K     GRN  +Y VTD SDD +  P+PG
Sbjct: 102 NGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFG--GRNGSYYVVTDHSDDDVVNPKPG 161

Query: 88  TLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNV 147
           TLR+    ++P +WI F++DM I L + LI++S+  ID RGA VHI   AC+ +   TNV
Sbjct: 162 TLRHAVIQVEP-LWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNV 221

Query: 148 IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID 207
           I+HGL IH CK      V    S+    G  DGDAI +  +S IWIDHN+L  C DGL+D
Sbjct: 222 IVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVD 281

Query: 208 VTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKII-----WSTGKVENAKWKFHSV 267
           V  GST ITISNN     D+V+LLGH+D Y RD+ M++      +  G ++      H  
Sbjct: 282 VVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGY 341

Query: 268 RDVFENGASFAQIGAGRGGVKPNYNA 288
             V  N  +  ++ A  G   P  N+
Sbjct: 342 FHVVNNDYTHWKMYAIGGSANPTINS 364

[Close]
BLAST of CmoCh01G008050 vs. NCBI nr
Match: gi|659066329|ref|XP_008439120.1| (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 426.4 bits (1095), Expect = 4.4e-116
Identity = 199/243 (81.89%), Postives = 221/243 (90.95%), Query Frame = 1 

Query: 4   QLIILSLISVALLAA--VSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 63
           QL +LSLIS   L +  VS +EA  ++MNAIDRCWR NPYWR+NRQ+LA CS+GF GKMT
Sbjct: 6   QLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFAGKMT 65

Query: 64  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYT 123
           NN+GRNL+HYQVTDPSDDP+ PRPGTLRYGATMIK KVWITFQKDMHIVL KPL+ISS+T
Sbjct: 66  NNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLISSFT 125

Query: 124 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 183
           AIDGRGATVHITGNACLMV RATN+IIHGLIIHHC++QAAG VMGP SK++SLGHVDGDA
Sbjct: 126 AIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHVDGDA 185

Query: 184 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 243
           IRLV+ASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGHDD Y RDRN
Sbjct: 186 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRN 245

Query: 244 MKI 245
           MK+
Sbjct: 246 MKV 248

[Close]
BLAST of CmoCh01G008050 vs. NCBI nr
Match: gi|700208874|gb|KGN63970.1| (hypothetical protein Csa_1G031910 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 1.7e-115
Identity = 197/243 (81.07%), Postives = 224/243 (92.18%), Query Frame = 1 

Query: 4   QLIILSLISVALL--AAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 63
           QL +LSLIS  LL   AVS++EA  +NMNAIDRCWR NPYWRKNRQ+LA CS+GF GKMT
Sbjct: 8   QLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMT 67

Query: 64  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYT 123
           NN+GRNL+HYQVTDPSDDP+ PRPGTLRYGATMIK KVWITF+KDMHIVL KPL++SS+T
Sbjct: 68  NNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFT 127

Query: 124 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 183
           AIDGRG+TVHITGNACLMV RATN+IIHGLIIHHCK+QAAG+VMGP +K++SLG+VDGDA
Sbjct: 128 AIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDA 187

Query: 184 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 243
           IRLV+ASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGHDD Y RDR+
Sbjct: 188 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRS 247

Query: 244 MKI 245
           M++
Sbjct: 248 MRV 250

[Close]
BLAST of CmoCh01G008050 vs. NCBI nr
Match: gi|643734841|gb|KDP41511.1| (hypothetical protein JCGZ_15918 [Jatropha curcas])

HSP 1 Score: 360.9 bits (925), Expect = 2.2e-96
Identity = 159/217 (73.27%), Postives = 190/217 (87.56%), Query Frame = 1 

Query: 28  NMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGT 87
           N+NAID CWR NP+WR++RQ+LA CSIGF GKM NNIG+N++ Y+VTDPSDDPL P+PGT
Sbjct: 25  NINAIDSCWRQNPHWRRSRQQLAKCSIGFAGKMINNIGKNVIRYKVTDPSDDPLNPKPGT 84

Query: 88  LRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDGRGATVHITGNACLMVSRATNVI 147
           LRYGAT+IK KVWITFQK+MHI L+KPL+ISS+TA+DGRG ++HITGNACL++ + +NVI
Sbjct: 85  LRYGATLIKEKVWITFQKNMHIKLDKPLLISSFTALDGRGVSIHITGNACLLLYKVSNVI 144

Query: 148 IHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDV 207
           IHGL IHHCKA A G V GP  KI+ L  +DGDAIRLV+ASK+WIDHNTLY C+DGL+DV
Sbjct: 145 IHGLNIHHCKASAPGSVRGPDGKIMPLSQMDGDAIRLVTASKVWIDHNTLYACQDGLLDV 204

Query: 208 TRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKI 245
           TRGST  TISNNW RDQDKV+LLGHDD YFRD+NMK+
Sbjct: 205 TRGSTSTTISNNWFRDQDKVMLLGHDDGYFRDKNMKV 241

[Close]
BLAST of CmoCh01G008050 vs. NCBI nr
Match: gi|571487513|ref|XP_006590673.1| (PREDICTED: probable pectate lyase 4 [Glycine max])

HSP 1 Score: 359.0 bits (920), Expect = 8.5e-96
Identity = 159/240 (66.25%), Postives = 198/240 (82.50%), Query Frame = 1 

Query: 5   LIILSLISVALLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNI 64
           +I++  +    L+A   ++   + MN IDRCWR NP WR++R +LA CS+G+ GKMTNNI
Sbjct: 16  IIVIITLYTPNLSAAKQSKINGLKMNVIDRCWRLNPEWRRHRPQLATCSVGYTGKMTNNI 75

Query: 65  GRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAID 124
           G++L+HY V DPSDDP+ P+ GTLRYGA++I+ KVWITFQ+DMHI L +PL+ISS+TAID
Sbjct: 76  GKDLIHYIVIDPSDDPINPKRGTLRYGASVIQGKVWITFQRDMHIKLERPLLISSFTAID 135

Query: 125 GRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRL 184
           GRG  VHI  NACLM+ +ATN+IIHG+ +HHCK QA G VMGP  K++ LGHVDGDAIRL
Sbjct: 136 GRGVNVHIANNACLMIFKATNIIIHGIRVHHCKPQAPGVVMGPEGKVIPLGHVDGDAIRL 195

Query: 185 VSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKI 244
           V+ASKIWIDHNTLY C+DGL+DVTRGSTD+TISNNW RDQDKV+LLGHDD Y RD+NMK+
Sbjct: 196 VTASKIWIDHNTLYNCQDGLLDVTRGSTDVTISNNWFRDQDKVMLLGHDDGYVRDQNMKV 255

[Close]
BLAST of CmoCh01G008050 vs. NCBI nr
Match: gi|502082100|ref|XP_004487065.1| (PREDICTED: probable pectate lyase 4 [Cicer arietinum])

HSP 1 Score: 359.0 bits (920), Expect = 8.5e-96
Identity = 160/239 (66.95%), Postives = 198/239 (82.85%), Query Frame = 1 

Query: 6   IILSLISVALLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIG 65
           +++ +I     ++   ++   + MN IDRCWRPNP WR+ RQ+LA CSIG+VGKM NN+G
Sbjct: 17  VVVIVIFTPKFSSAKQSKLVGLKMNMIDRCWRPNPEWRRYRQQLAFCSIGYVGKMINNVG 76

Query: 66  RNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLIISSYTAIDG 125
            +L+HY+V D +DDP+ P+PGTLRYGA++I+ KVWITFQKDM+I L KPL+ISS+T IDG
Sbjct: 77  NDLIHYKVIDSNDDPINPKPGTLRYGASVIQGKVWITFQKDMNIKLMKPLLISSFTTIDG 136

Query: 126 RGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLV 185
           RGATVHI  NACLM+ + TN+IIH + IHHCKAQA G VMGP  K++SLG VDGDAIRLV
Sbjct: 137 RGATVHIADNACLMIYKTTNIIIHNIRIHHCKAQAPGMVMGPNGKVISLGQVDGDAIRLV 196

Query: 186 SASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKI 245
           +ASKIWIDHNTLY CEDGL+DVTRGSTD+TISNNW R+QDKV+LLGHDD Y RD+NMK+
Sbjct: 197 TASKIWIDHNTLYSCEDGLLDVTRGSTDVTISNNWFREQDKVMLLGHDDGYVRDKNMKV 255

The following BLAST results are available for this feature:
BLAST of CmoCh01G008050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLY11_ARATH6.6e-5643.01Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2[more]
PLY14_ARATH7.3e-5541.96Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=2[more]
PLY4_ARATH3.6e-5446.00Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1[more]
PLY9_ARATH4.7e-5443.23Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1[more]
PLY_ZINVI6.2e-5441.26Pectate lyase OS=Zinnia violacea PE=1 SV=1[more]
BLAST of CmoCh01G008050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPZ1_CUCSA1.2e-11581.07Pectate lyase OS=Cucumis sativus GN=Csa_1G031910 PE=3 SV=1[more]
A0A067KZ75_JATCU1.6e-9673.27Pectate lyase OS=Jatropha curcas GN=JCGZ_15918 PE=3 SV=1[more]
K7LNC8_SOYBN6.0e-9666.25Pectate lyase OS=Glycine max GN=GLYMA_11G063300 PE=3 SV=1[more]
A0A0B2SCK6_GLYSO2.3e-9572.69Pectate lyase OS=Glycine soja GN=glysoja_003759 PE=3 SV=1[more]
G7K488_MEDTR6.6e-9565.69Pectate lyase OS=Medicago truncatula GN=MTR_5g035840 PE=3 SV=1[more]
BLAST of CmoCh01G008050 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09280.11.5e-7769.19 Pectin lyase-like superfamily protein[more]
AT3G27400.13.7e-5743.01 Pectin lyase-like superfamily protein[more]
AT4G13210.24.1e-5641.96 Pectin lyase-like superfamily protein[more]
AT1G30350.12.0e-5546.00 Pectin lyase-like superfamily protein[more]
AT3G24230.12.7e-5543.23 Pectate lyase family protein[more]
BLAST of CmoCh01G008050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066329|ref|XP_008439120.1|4.4e-11681.89PREDICTED: putative pectate lyase 2 [Cucumis melo][more]
gi|700208874|gb|KGN63970.1|1.7e-11581.07hypothetical protein Csa_1G031910 [Cucumis sativus][more]
gi|643734841|gb|KDP41511.1|2.2e-9673.27hypothetical protein JCGZ_15918 [Jatropha curcas][more]
gi|571487513|ref|XP_006590673.1|8.5e-9666.25PREDICTED: probable pectate lyase 4 [Glycine max][more]
gi|502082100|ref|XP_004487065.1|8.5e-9666.95PREDICTED: probable pectate lyase 4 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002022Pec_lyase
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
IPR018082AmbAllergen
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045490 pectin catabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0030570 pectate lyase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G008050.1CmoCh01G008050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002022Pectate lyase/Amb allergenPFAMPF00544Pec_lyase_Ccoord: 117..235
score: 3.9
IPR002022Pectate lyase/Amb allergenSMARTSM00656amb_allcoord: 106..286
score: 3.6
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 29..247
score: 9.9
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 30..244
score: 6.9
IPR018082AmbAllergenPRINTSPR00807AMBALLERGENcoord: 114..130
score: 2.7E-16coord: 178..199
score: 2.7E-16coord: 77..102
score: 2.7
NoneNo IPR availablePANTHERPTHR31683FAMILY NOT NAMEDcoord: 1..317
score: 5.3E
NoneNo IPR availablePANTHERPTHR31683:SF8MAJOR POLLEN ALLERGEN-LIKE PROTEINcoord: 1..317
score: 5.3E