Carg04726 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04726
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pectate lyase
Location	Cucurbita_argyrosperma_scaffold_028 : 623794 .. 625128 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGCCACCCAACTCTTTGTTCTGTCTCTTATTTCCCTCACTCTCCTCTCCGCAGTTTCTTATTCAGAAGGCAATGGGTTGAAGATGAACGCCATTGACAGATGCTGGAGATCGAACCCGTACTGGAGGAGAAACAGGCAACAACTGGGCGTTTGCTCGGTGGGTTTCGTTGGAAAAATGACCAACAACGTCGGAAGAAATCTCATACGCTACCAAGTCACCGACCCTAGCGACGATCCTATAAACCCACGCCCAGGTACACTCCGATACGGCGCCACAATGATCAAGTCCAAAGTCTGGATCACCTTCCAAAAAGACATGCACATCCTGCTCCACAAGCCGCTTCTCATAAGCAGCTACACAGCCATCGACGGGCGAGGGGCCAGCGTCCACATCTCCGGTAATGCATGCCTGGTGGTCTCCAAGGCCACCAACATCATAATCCACGGCCTTATCATCCACCACTGCAAGGCTCAGGGCGCAGGACAAGTCATGGGCCCTAATTCCAAGTTGGTTTCGCTTGGACACGTGGACGGCGATGCCATTCGTTTAGTATCAGCATCCAAAGTCTGGATTGACCACAACACACTGTACCGCTGCGAGGATGGGCTGCTCGACGTCACCAGAGGCTCCACTGACATCACCATTTCCAACAATTGGTTCCGCGACCAAGACAAGGTTATTCTTCTCGGCCACGAGGACGGCTATGTCCGAGACAAGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAACTGCAACCAAAGGATGCCGAGGTAACTATTAGGATTCACGGAACATTCATAATGATAGGATATTGTCTATTTTGAGCCTAAGCTCTTAACGTGTGACTGGGTATTAAATTAAAATGATTGGTTTTATAGGATCCGACATGGGTATGCCCACGTGGCTAACAATTTGTACCAAGGATGGACGCAATACGCGATTGGAGGGAGCATGAATCCAAGCGTGAAGAGTGAAGCCAACCTGTTCATCGCATCAAAATCAAAACAGGCAATAATGACATAAACTAAATCATTCCATTTCCGGGTTTACAAAATATCGAGATTTGAATTTATTTTGTGTGAATAACAATGGCAGATTGTATGGAGCACCGGGAAAGTAGAGGCGGCAAAATGGAAGTTTCATTCCGTCAGAGACGTTTTTGAAAACGGAGCTTCCTTCGGACAGATTGGTGTGGGGCGAGGAGGCGTAAAGCCAAATTACAGCGCCCAGCAGCGGTTTCCAGTGGCTGATGCTAAGTGGGTGAGATCATTGACGAGCTCCTCCGGGGCTCTACGCTGCTCGTCAAAGTCAAGATGTTGA

mRNA sequence

ATGGGCGCCACCCAACTCTTTGTTCTGTCTCTTATTTCCCTCACTCTCCTCTCCGCAGTTTCTTATTCAGAAGGCAATGGGTTGAAGATGAACGCCATTGACAGATGCTGGAGATCGAACCCGTACTGGAGGAGAAACAGGCAACAACTGGGCGTTTGCTCGGTGGGTTTCGTTGGAAAAATGACCAACAACGTCGGAAGAAATCTCATACGCTACCAAGTCACCGACCCTAGCGACGATCCTATAAACCCACGCCCAGGTACACTCCGATACGGCGCCACAATGATCAAGTCCAAAGTCTGGATCACCTTCCAAAAAGACATGCACATCCTGCTCCACAAGCCGCTTCTCATAAGCAGCTACACAGCCATCGACGGGCGAGGGGCCAGCGTCCACATCTCCGGTAATGCATGCCTGGTGGTCTCCAAGGCCACCAACATCATAATCCACGGCCTTATCATCCACCACTGCAAGGCTCAGGGCGCAGGACAAGTCATGGGCCCTAATTCCAAGTTGGTTTCGCTTGGACACGTGGACGGCGATGCCATTCGTTTAGTATCAGCATCCAAAGTCTGGATTGACCACAACACACTGTACCGCTGCGAGGATGGGCTGCTCGACGTCACCAGAGGCTCCACTGACATCACCATTTCCAACAATTGGTTCCGCGACCAAGACAAGGTTATTCTTCTCGGCCACGAGGACGGCTATGTCCGAGACAAGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAACTGCAACCAAAGGATGCCGAGGATCCGACATGGGTATGCCCACGTGGCTAACAATTTGTACCAAGGATGGACGCAATACGCGATTGGAGGGAGCATGAATCCAAGCGTGAAGAGTGAAGCCAACCTGTTCATCGCATCAAAATCAAAACAGATTGTATGGAGCACCGGGAAAGTAGAGGCGGCAAAATGGAAGTTTCATTCCGTCAGAGACGTTTTTGAAAACGGAGCTTCCTTCGGACAGATTGGTGTGGGGCGAGGAGGCGTAAAGCCAAATTACAGCGCCCAGCAGCGGTTTCCAGTGGCTGATGCTAAGTGGGTGAGATCATTGACGAGCTCCTCCGGGGCTCTACGCTGCTCGTCAAAGTCAAGATGTTGA

Coding sequence (CDS)

ATGGGCGCCACCCAACTCTTTGTTCTGTCTCTTATTTCCCTCACTCTCCTCTCCGCAGTTTCTTATTCAGAAGGCAATGGGTTGAAGATGAACGCCATTGACAGATGCTGGAGATCGAACCCGTACTGGAGGAGAAACAGGCAACAACTGGGCGTTTGCTCGGTGGGTTTCGTTGGAAAAATGACCAACAACGTCGGAAGAAATCTCATACGCTACCAAGTCACCGACCCTAGCGACGATCCTATAAACCCACGCCCAGGTACACTCCGATACGGCGCCACAATGATCAAGTCCAAAGTCTGGATCACCTTCCAAAAAGACATGCACATCCTGCTCCACAAGCCGCTTCTCATAAGCAGCTACACAGCCATCGACGGGCGAGGGGCCAGCGTCCACATCTCCGGTAATGCATGCCTGGTGGTCTCCAAGGCCACCAACATCATAATCCACGGCCTTATCATCCACCACTGCAAGGCTCAGGGCGCAGGACAAGTCATGGGCCCTAATTCCAAGTTGGTTTCGCTTGGACACGTGGACGGCGATGCCATTCGTTTAGTATCAGCATCCAAAGTCTGGATTGACCACAACACACTGTACCGCTGCGAGGATGGGCTGCTCGACGTCACCAGAGGCTCCACTGACATCACCATTTCCAACAATTGGTTCCGCGACCAAGACAAGGTTATTCTTCTCGGCCACGAGGACGGCTATGTCCGAGACAAGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAACTGCAACCAAAGGATGCCGAGGATCCGACATGGGTATGCCCACGTGGCTAACAATTTGTACCAAGGATGGACGCAATACGCGATTGGAGGGAGCATGAATCCAAGCGTGAAGAGTGAAGCCAACCTGTTCATCGCATCAAAATCAAAACAGATTGTATGGAGCACCGGGAAAGTAGAGGCGGCAAAATGGAAGTTTCATTCCGTCAGAGACGTTTTTGAAAACGGAGCTTCCTTCGGACAGATTGGTGTGGGGCGAGGAGGCGTAAAGCCAAATTACAGCGCCCAGCAGCGGTTTCCAGTGGCTGATGCTAAGTGGGTGAGATCATTGACGAGCTCCTCCGGGGCTCTACGCTGCTCGTCAAAGTCAAGATGTTGA

Protein sequence

MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLTSSSGALRCSSKSRC

Homology

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BLAST of Carg04726 vs. NCBI nr
Match: XP_022923821.1 (putative pectate lyase 2 [Cucurbita moschata])

HSP 1 Score: 778.9 bits (2010), Expect = 8.0e-222
Identity = 378/379 (99.74%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK 60
           MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK
Sbjct: 1   MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK 60

Query: 61  MTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISS 120
           MTNN+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISS
Sbjct: 61  MTNNIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISS 120

Query: 121 YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG 180
           YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG
Sbjct: 121 YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG 180

Query: 181 DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD 240
           DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD
Sbjct: 181 DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD 240

Query: 241 KNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 300
           KNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA
Sbjct: 241 KNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 300

Query: 301 SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW 360
           SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW
Sbjct: 301 SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW 360

Query: 361 VRSLTSSSGALRCSSKSRC 380
           VRSLTSSSGALRCSSKSRC
Sbjct: 361 VRSLTSSSGALRCSSKSRC 379

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BLAST of Carg04726 vs. NCBI nr
Match: XP_023520094.1 (putative pectate lyase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775.8 bits (2002), Expect = 6.8e-221
Identity = 377/379 (99.47%), Postives = 378/379 (99.74%), Query Frame = 0


Query: 1   MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK 60
           MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK
Sbjct: 1   MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK 60

Query: 61  MTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISS 120
           MTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATM+KSKVWITFQKDMHILLHKPLLISS
Sbjct: 61  MTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMMKSKVWITFQKDMHILLHKPLLISS 120

Query: 121 YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG 180
           YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG
Sbjct: 121 YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG 180

Query: 181 DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD 240
           DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD
Sbjct: 181 DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD 240

Query: 241 KNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 300
            NMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA
Sbjct: 241 MNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 300

Query: 301 SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW 360
           SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW
Sbjct: 301 SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW 360

Query: 361 VRSLTSSSGALRCSSKSRC 380
           VRSLTSSSGALRCSSKSRC
Sbjct: 361 VRSLTSSSGALRCSSKSRC 379

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BLAST of Carg04726 vs. NCBI nr
Match: XP_023001119.1 (putative pectate lyase 2 [Cucurbita maxima])

HSP 1 Score: 767.7 bits (1981), Expect = 1.9e-218
Identity = 373/379 (98.42%), Postives = 375/379 (98.94%), Query Frame = 0


Query: 1   MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK 60
           MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK
Sbjct: 1   MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK 60

Query: 61  MTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISS 120
           MTNN+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQK MHILLHKPLLISS
Sbjct: 61  MTNNIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKGMHILLHKPLLISS 120

Query: 121 YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG 180
           YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG
Sbjct: 121 YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG 180

Query: 181 DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD 240
           DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD
Sbjct: 181 DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD 240

Query: 241 KNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 300
           KNMRVTV+YNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA
Sbjct: 241 KNMRVTVIYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 300

Query: 301 SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW 360
           SK KQIVWSTGKVEAAKWKFHSV DVFENGASF QIGVGRGGVKPNYSAQQRFPVADAKW
Sbjct: 301 SKLKQIVWSTGKVEAAKWKFHSVGDVFENGASFEQIGVGRGGVKPNYSAQQRFPVADAKW 360

Query: 361 VRSLTSSSGALRCSSKSRC 380
           VRSLTSSSGALRCSSKSRC
Sbjct: 361 VRSLTSSSGALRCSSKSRC 379

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BLAST of Carg04726 vs. NCBI nr
Match: XP_008439120.1 (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 685.6 bits (1768), Expect = 9.3e-194
Identity = 325/377 (86.21%), Postives = 352/377 (93.37%), Query Frame = 0


Query: 5   QLFVLSLISLTLL--SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 64
           QL VLSLIS   L  + VS SE +GL MNAIDRCWRSNPYWRRNRQQL  CSVGF GKMT
Sbjct: 6   QLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFAGKMT 65

Query: 65  NNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 124
           NN+GRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITFQKDMHI+L KPLLISS+T
Sbjct: 66  NNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLISSFT 125

Query: 125 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 184
           AIDGRGA+VHI+GNACL+V +ATNIIIHGLIIHHC++Q AG+VMGPNSK++SLGHVDGDA
Sbjct: 126 AIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHVDGDA 185

Query: 185 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 244
           IRLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+N
Sbjct: 186 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRN 245

Query: 245 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 304
           M+VTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK
Sbjct: 246 MKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 305

Query: 305 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 364
           SKQ++WSTG VE AKWKFHSVRDVFENGA F +IGVGRG VKPNY+ QQRFPVADAKW+R
Sbjct: 306 SKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADAKWIR 365

Query: 365 SLTSSSGALRCSSKSRC 380
           +LTSSSGALRC+S S+C
Sbjct: 366 ALTSSSGALRCTSNSKC 382

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BLAST of Carg04726 vs. NCBI nr
Match: KGN63970.1 (hypothetical protein Csa_1G031910 [Cucumis sativus])

HSP 1 Score: 685.6 bits (1768), Expect = 9.3e-194
Identity = 322/377 (85.41%), Postives = 356/377 (94.43%), Query Frame = 0


Query: 5   QLFVLSLISLTLL--SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 64
           QL VLSLIS  LL  +AVSYSE +GL MNAIDRCWRSNPYWR+NRQQL  CSVGF GKMT
Sbjct: 8   QLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMT 67

Query: 65  NNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 124
           NN+GRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDMHI+L KPLL+SS+T
Sbjct: 68  NNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFT 127

Query: 125 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 184
           AIDGRG++VHI+GNACL+V +ATNIIIHGLIIHHCK+Q AGQVMGPN+K++SLG+VDGDA
Sbjct: 128 AIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDA 187

Query: 185 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 244
           IRLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD++
Sbjct: 188 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRS 247

Query: 245 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 304
           MRVTV+YNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK
Sbjct: 248 MRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 307

Query: 305 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 364
           SKQ++WSTGKVE AKWKFHSVRD FENGASF +IGVG+G VKPNY+ QQRFPVADAKW+R
Sbjct: 308 SKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIR 367

Query: 365 SLTSSSGALRCSSKSRC 380
           +LTSSSGALRC+S S+C
Sbjct: 368 ALTSSSGALRCTSNSKC 384

[Close]

BLAST of Carg04726 vs. TAIR10
Match: AT5G09280.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 414.8 bits (1065), Expect = 5.5e-116
Identity = 187/257 (72.76%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 61  MTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISS 120
           MT N+G+ + +Y+VTDPSDDP+NP+PGTLRYGAT++K K WITF+++M I LHKPLLISS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 121 YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG 180
           +TA+DGRGASVHISG ACL+V +AT++IIHGL IH CKA     VMGP+SK++ LGH+DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 181 DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD 240
           DAIRLV+A KVWIDHNTLY CEDGLLDVT GSTD+T+SNNWFR+QDKV+LLGH+DGYV+D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 241 KNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 300
           K+MRVTVV+NHFGPNCNQRMPR+RHGYAHVANN YQGWTQYAIGGSM+P VKSE+N F+A
Sbjct: 181 KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA 240

Query: 301 SK--SKQIVWSTGKVEA 316
            K  SK+++   G + A
Sbjct: 241 PKSGSKEVLEKHGPITA 257

[Close]

BLAST of Carg04726 vs. TAIR10
Match: AT1G11920.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 335.5 bits (859), Expect = 4.3e-92
Identity = 183/390 (46.92%), Postives = 242/390 (62.05%), Query Frame = 0


Query: 1   MGATQLFVLSLISLTLLSAV---SYSEG---NGLKMNAIDRCWRSNPYWRRNRQQLGVCS 60
           M +  L ++SL+     S+V   +YS G     L  N ID CWR NPYW  NR+ L  C+
Sbjct: 1   MASLFLTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCA 60

Query: 61  VGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSK-VWITFQKDMHILLH 120
           VGF GK     G+    Y VT+PSDDP NPRPGTLRY   +I+SK +WITF +DM I+L 
Sbjct: 61  VGF-GKSAVG-GKYGSIYVVTNPSDDPENPRPGTLRY--AVIQSKPLWITFARDMVIVLR 120

Query: 121 KPLLISSYTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLV 180
             L+++SY  IDGRGA V I+   C+ +   +++IIHG+ IH CK   +G+V    + + 
Sbjct: 121 NELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVG 180

Query: 181 SLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH 240
           S    DGDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH
Sbjct: 181 SRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGH 240

Query: 241 EDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKS 300
            D  V DK MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ S
Sbjct: 241 NDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFS 300

Query: 301 EANLFIASKSKQIVWSTGKVEAA----KWKFHSVRDVFENGASFGQIGVGRGGVKPNYSA 360
           E N F+AS        T ++++     +WK+ + +DVF+NGA F  +  G G V P Y  
Sbjct: 301 EGNYFVASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGR 360

Query: 361 QQRFPVADAKWVRSLTSSSGALRCSSKSRC 380
            +RFPV+    V  LTSS+G L C S   C
Sbjct: 361 AERFPVSHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]

BLAST of Carg04726 vs. TAIR10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 322.0 bits (824), Expect = 4.9e-88
Identity = 177/373 (47.45%), Postives = 230/373 (61.66%), Query Frame = 0


Query: 6   LFVLSLISLTLLSAVSYS-EGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNN 65
           L + +  S  L +A SY+     + +N ID CWR NP W  NRQ L  C+VG+ GK    
Sbjct: 10  LLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG 69

Query: 66  VGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTAI 125
            G+N   Y VT+PSD+P  P PGTLRY  +  K  +WITF +DM I+L   L+I+SY  I
Sbjct: 70  -GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPK-PLWITFARDMVIVLKSQLMINSYKTI 129

Query: 126 DGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIR 185
           DGRGA V I+   CL + +  ++IIHG+ IH CKA        PN        +DGD IR
Sbjct: 130 DGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKAD-------PNG-------MDGDGIR 189

Query: 186 LVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMR 245
           +  ++ VWIDH  L RC DGL+DV   ST +TISNN+F   DKV+LLGH+D Y+ DK+MR
Sbjct: 190 VFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMR 249

Query: 246 VTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSK 305
           VT+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + +
Sbjct: 250 VTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKR 309

Query: 306 QIVWSTGKV----EAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW 365
                T ++    ++ +WK+ + RDVF NGA FG  GV    V+P Y   + F VA    
Sbjct: 310 SSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSL 362

Query: 366 VRSLTSSSGALRC 374
           V SLTSS+G LRC
Sbjct: 370 VPSLTSSAGPLRC 362

[Close]

BLAST of Carg04726 vs. TAIR10
Match: AT4G22080.1 (root hair specific 14)

HSP 1 Score: 316.6 bits (810), Expect = 2.1e-86
Identity = 164/353 (46.46%), Postives = 210/353 (59.49%), Query Frame = 0


Query: 30  MNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTL 89
           MN +D CWR    W  NR+ L  C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 90  RYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGRGASVHISGNACLVVSKATNIII 149
           RYG    K  +WITF KDM I L   L+++SY  IDGRGA V I+   C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 150 HGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVT 209
           HG+ IH CK    G V    + +      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 210 RGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAH 269
             ST ITISNN+F   DKV+LLGH D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 270 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIVWSTGKVEAAKWKFHSVRDV 329
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 330 FENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLTSSSGALRCSSKSRC 380
           F+NGA F  +  G G +   YS+ QRF VA    V SLT+ +G L C+    C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Carg04726 vs. TAIR10
Match: AT4G22090.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 315.8 bits (808), Expect = 3.5e-86
Identity = 164/353 (46.46%), Postives = 211/353 (59.77%), Query Frame = 0


Query: 30  MNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTL 89
           MN +D CWR    W  NR+ L  C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 90  RYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGRGASVHISGNACLVVSKATNIII 149
           RYG    K  +WITF KDM I L   L+++SY  IDGRGA V I+   C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 150 HGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVT 209
           HG+ IH CK   +G+V    + +      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 210 RGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAH 269
             ST ITISNN+F   DKV+LLGH D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 270 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIVWSTGKVEAAKWKFHSVRDV 329
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 330 FENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLTSSSGALRCSSKSRC 380
           F+NGA F  +  G G +   YS+ QRF VA    V SLT+ +G L C+    C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Carg04726 vs. Swiss-Prot
Match: sp|O65388|PLY2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 7.7e-91
Identity = 183/390 (46.92%), Postives = 242/390 (62.05%), Query Frame = 0


Query: 1   MGATQLFVLSLISLTLLSAV---SYSEG---NGLKMNAIDRCWRSNPYWRRNRQQLGVCS 60
           M +  L ++SL+     S+V   +YS G     L  N ID CWR NPYW  NR+ L  C+
Sbjct: 1   MASLFLTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCA 60

Query: 61  VGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSK-VWITFQKDMHILLH 120
           VGF GK     G+    Y VT+PSDDP NPRPGTLRY   +I+SK +WITF +DM I+L 
Sbjct: 61  VGF-GKSAVG-GKYGSIYVVTNPSDDPENPRPGTLRY--AVIQSKPLWITFARDMVIVLR 120

Query: 121 KPLLISSYTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLV 180
             L+++SY  IDGRGA V I+   C+ +   +++IIHG+ IH CK   +G+V    + + 
Sbjct: 121 NELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVG 180

Query: 181 SLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH 240
           S    DGDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH
Sbjct: 181 SRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGH 240

Query: 241 EDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKS 300
            D  V DK MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ S
Sbjct: 241 NDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFS 300

Query: 301 EANLFIASKSKQIVWSTGKVEAA----KWKFHSVRDVFENGASFGQIGVGRGGVKPNYSA 360
           E N F+AS        T ++++     +WK+ + +DVF+NGA F  +  G G V P Y  
Sbjct: 301 EGNYFVASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGR 360

Query: 361 QQRFPVADAKWVRSLTSSSGALRCSSKSRC 380
            +RFPV+    V  LTSS+G L C S   C
Sbjct: 361 AERFPVSHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]

BLAST of Carg04726 vs. Swiss-Prot
Match: sp|Q9C8G4|PLY4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 8.8e-87
Identity = 177/373 (47.45%), Postives = 230/373 (61.66%), Query Frame = 0


Query: 6   LFVLSLISLTLLSAVSYS-EGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNN 65
           L + +  S  L +A SY+     + +N ID CWR NP W  NRQ L  C+VG+ GK    
Sbjct: 10  LLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG 69

Query: 66  VGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTAI 125
            G+N   Y VT+PSD+P  P PGTLRY  +  K  +WITF +DM I+L   L+I+SY  I
Sbjct: 70  -GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPK-PLWITFARDMVIVLKSQLMINSYKTI 129

Query: 126 DGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIR 185
           DGRGA V I+   CL + +  ++IIHG+ IH CKA        PN        +DGD IR
Sbjct: 130 DGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKAD-------PNG-------MDGDGIR 189

Query: 186 LVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMR 245
           +  ++ VWIDH  L RC DGL+DV   ST +TISNN+F   DKV+LLGH+D Y+ DK+MR
Sbjct: 190 VFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMR 249

Query: 246 VTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSK 305
           VT+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + +
Sbjct: 250 VTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKR 309

Query: 306 QIVWSTGKV----EAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW 365
                T ++    ++ +WK+ + RDVF NGA FG  GV    V+P Y   + F VA    
Sbjct: 310 SSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSL 362

Query: 366 VRSLTSSSGALRC 374
           V SLTSS+G LRC
Sbjct: 370 VPSLTSSAGPLRC 362

[Close]

BLAST of Carg04726 vs. Swiss-Prot
Match: sp|O65456|PLY16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.7e-85
Identity = 164/353 (46.46%), Postives = 210/353 (59.49%), Query Frame = 0


Query: 30  MNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTL 89
           MN +D CWR    W  NR+ L  C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 90  RYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGRGASVHISGNACLVVSKATNIII 149
           RYG    K  +WITF KDM I L   L+++SY  IDGRGA V I+   C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 150 HGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVT 209
           HG+ IH CK    G V    + +      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 210 RGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAH 269
             ST ITISNN+F   DKV+LLGH D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 270 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIVWSTGKVEAAKWKFHSVRDV 329
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 330 FENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLTSSSGALRCSSKSRC 380
           F+NGA F  +  G G +   YS+ QRF VA    V SLT+ +G L C+    C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Carg04726 vs. Swiss-Prot
Match: sp|O65457|PLY17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 6.3e-85
Identity = 164/353 (46.46%), Postives = 211/353 (59.77%), Query Frame = 0


Query: 30  MNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTL 89
           MN +D CWR    W  NR+ L  C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 90  RYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGRGASVHISGNACLVVSKATNIII 149
           RYG    K  +WITF KDM I L   L+++SY  IDGRGA V I+   C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 150 HGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVT 209
           HG+ IH CK   +G+V    + +      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 210 RGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAH 269
             ST ITISNN+F   DKV+LLGH D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 270 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIVWSTGKVEAAKWKFHSVRDV 329
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 330 FENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLTSSSGALRCSSKSRC 380
           F+NGA F  +  G G +   YS+ QRF VA    V SLT+ +G L C+    C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Carg04726 vs. Swiss-Prot
Match: sp|Q9LRM5|PLY9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana OX=3702 GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 4.1e-84
Identity = 167/364 (45.88%), Postives = 214/364 (58.79%), Query Frame = 0


Query: 22  YSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGRNLIRYQVTDPSDDP 81
           +S GNG   N ID CWR +  W +NR+ L  C +GF  K     GRN   Y VTD SDD 
Sbjct: 98  FSCGNG---NLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFG--GRNGSYYVVTDHSDDD 157

Query: 82  -INPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGRGASVHISGNACLV 141
            +NP+PGTLR+    ++  +WI F++DM I L + L+++S+  ID RGA+VHI+  AC+ 
Sbjct: 158 VVNPKPGTLRHAVIQVE-PLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACIT 217

Query: 142 VSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVSASKVWIDHNTLYR 201
           +   TN+I+HGL IH CK  G   V    S+    G  DGDAI +  +S +WIDHN+L  
Sbjct: 218 IQNITNVIVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSN 277

Query: 202 CEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTVVYNHFGPNCNQRM 261
           C DGL+DV  GST ITISNN F   D+V+LLGH D Y RDK M+VTV YNHFG    QRM
Sbjct: 278 CTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRM 337

Query: 262 PRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIVWSTGKV-----EA 321
           PR RHGY HV NN Y  W  YAIGGS NP++ S+ N F A K+      T ++     E 
Sbjct: 338 PRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEW 397

Query: 322 AKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLTSSSGALRCSS 380
            +W + S +D+  NGA F   G G  G     S     P   A  V ++T+S+GAL C  
Sbjct: 398 MEWNWRSEKDLLVNGAFFTPSGEGASGDSQTLS----LPAKPASMVDAITASAGALSCRR 451

[Close]

BLAST of Carg04726 vs. TrEMBL
Match: tr|A0A1S3AY18|A0A1S3AY18_CUCME (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 6.1e-194
Identity = 325/377 (86.21%), Postives = 352/377 (93.37%), Query Frame = 0


Query: 5   QLFVLSLISLTLL--SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 64
           QL VLSLIS   L  + VS SE +GL MNAIDRCWRSNPYWRRNRQQL  CSVGF GKMT
Sbjct: 6   QLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFAGKMT 65

Query: 65  NNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 124
           NN+GRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITFQKDMHI+L KPLLISS+T
Sbjct: 66  NNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLISSFT 125

Query: 125 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 184
           AIDGRGA+VHI+GNACL+V +ATNIIIHGLIIHHC++Q AG+VMGPNSK++SLGHVDGDA
Sbjct: 126 AIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHVDGDA 185

Query: 185 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 244
           IRLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+N
Sbjct: 186 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRN 245

Query: 245 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 304
           M+VTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK
Sbjct: 246 MKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 305

Query: 305 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 364
           SKQ++WSTG VE AKWKFHSVRDVFENGA F +IGVGRG VKPNY+ QQRFPVADAKW+R
Sbjct: 306 SKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADAKWIR 365

Query: 365 SLTSSSGALRCSSKSRC 380
           +LTSSSGALRC+S S+C
Sbjct: 366 ALTSSSGALRCTSNSKC 382

[Close]

BLAST of Carg04726 vs. TrEMBL
Match: tr|A0A0A0LPZ1|A0A0A0LPZ1_CUCSA (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 6.1e-194
Identity = 322/377 (85.41%), Postives = 356/377 (94.43%), Query Frame = 0


Query: 5   QLFVLSLISLTLL--SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 64
           QL VLSLIS  LL  +AVSYSE +GL MNAIDRCWRSNPYWR+NRQQL  CSVGF GKMT
Sbjct: 8   QLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMT 67

Query: 65  NNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 124
           NN+GRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDMHI+L KPLL+SS+T
Sbjct: 68  NNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFT 127

Query: 125 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 184
           AIDGRG++VHI+GNACL+V +ATNIIIHGLIIHHCK+Q AGQVMGPN+K++SLG+VDGDA
Sbjct: 128 AIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDA 187

Query: 185 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 244
           IRLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD++
Sbjct: 188 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRS 247

Query: 245 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 304
           MRVTV+YNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK
Sbjct: 248 MRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 307

Query: 305 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 364
           SKQ++WSTGKVE AKWKFHSVRD FENGASF +IGVG+G VKPNY+ QQRFPVADAKW+R
Sbjct: 308 SKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIR 367

Query: 365 SLTSSSGALRCSSKSRC 380
           +LTSSSGALRC+S S+C
Sbjct: 368 ALTSSSGALRCTSNSKC 384

[Close]

BLAST of Carg04726 vs. TrEMBL
Match: tr|A0A199UA94|A0A199UA94_MANES (Pectate lyase OS=Manihot esculenta OX=3983 GN=MANES_S076100 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 2.4e-153
Identity = 258/353 (73.09%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 30  MNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGRNLIRYQVTDPSDDPINPRPGTL 89
           MN ID CWR NP WRR+RQQL  CSVGF GKMTNN+G++ IRY+V+DPSDDP+NP+ GTL
Sbjct: 2   MNPIDSCWRQNPNWRRSRQQLATCSVGFSGKMTNNIGKDTIRYKVSDPSDDPLNPKKGTL 61

Query: 90  RYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGRGASVHISGNACLVVSKATNIII 149
           RYGATMI  KVWITFQK+M+I L KPLLISS+T +DGRG  +HI+GNACL+V KAT++II
Sbjct: 62  RYGATMITGKVWITFQKNMNIQLVKPLLISSFTTLDGRGVDIHITGNACLLVYKATDVII 121

Query: 150 HGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVSASKVWIDHNTLYRCEDGLLDVT 209
           HGL IHHCKA G   V GPN ++V LG +DGDAIRLV+ASKVWIDHNTLY C+DGLLDVT
Sbjct: 122 HGLRIHHCKAVGPSSVRGPNGEMVPLGQMDGDAIRLVTASKVWIDHNTLYSCQDGLLDVT 181

Query: 210 RGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTVVYNHFGPNCNQRMPRIRHGYAH 269
           RGSTD+TISNNWF+DQDKV+LLGH+DGY+RDKNMRVTVV+NHFGPNCNQRMPR+RHGYAH
Sbjct: 182 RGSTDVTISNNWFKDQDKVMLLGHDDGYLRDKNMRVTVVFNHFGPNCNQRMPRVRHGYAH 241

Query: 270 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS--KQIVWSTG-KVEAAKWKFHSVRDV 329
           VANNLYQGW QYAIGGSMNPS+KSEAN FIA KS  K++ W  G  V++  WKF+SV DV
Sbjct: 242 VANNLYQGWEQYAIGGSMNPSIKSEANYFIAPKSGNKEVTWRNGINVKSKPWKFYSVGDV 301

Query: 330 FENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLTSSSGALRCSSKSRC 380
           FENGASF Q G+  GG  PNY+ QQRF VADAK+V+S+T SSGAL+C     C
Sbjct: 302 FENGASFIQTGL--GGANPNYNDQQRFKVADAKFVKSITKSSGALKCFRTIMC 352

[Close]

BLAST of Carg04726 vs. TrEMBL
Match: tr|K7LNC8|K7LNC8_SOYBN (Pectate lyase OS=Glycine max OX=3847 GN=100780437 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 3.1e-153
Identity = 267/382 (69.90%), Postives = 308/382 (80.63%), Query Frame = 0


Query: 7   FVLSLISLTL----LSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 66
           FVL ++ +TL    LSA   S+ NGLKMN IDRCWR NP WRR+R QL  CSVG+ GKMT
Sbjct: 13  FVLIIVIITLYTPNLSAAKQSKINGLKMNVIDRCWRLNPEWRRHRPQLATCSVGYTGKMT 72

Query: 67  NNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 126
           NN+G++LI Y V DPSDDPINP+ GTLRYGA++I+ KVWITFQ+DMHI L +PLLISS+T
Sbjct: 73  NNIGKDLIHYIVIDPSDDPINPKRGTLRYGASVIQGKVWITFQRDMHIKLERPLLISSFT 132

Query: 127 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 186
           AIDGRG +VHI+ NACL++ KATNIIIHG+ +HHCK Q  G VMGP  K++ LGHVDGDA
Sbjct: 133 AIDGRGVNVHIANNACLMIFKATNIIIHGIRVHHCKPQAPGVVMGPEGKVIPLGHVDGDA 192

Query: 187 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 246
           IRLV+ASK+WIDHNTLY C+DGLLDVTRGSTD+TISNNWFRDQDKV+LLGH+DGYVRD+N
Sbjct: 193 IRLVTASKIWIDHNTLYNCQDGLLDVTRGSTDVTISNNWFRDQDKVMLLGHDDGYVRDQN 252

Query: 247 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 306
           M+VTVVYNHFGPNCNQRMPRIRHGYAHVANNLY GW QYAIGGSM PS+KSEANLFIA  
Sbjct: 253 MKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWVQYAIGGSMGPSLKSEANLFIAPT 312

Query: 307 --SKQIVW-STGKVEAAKWKFHSVRDVFENGASFGQIGVGRGG--VKPNYSAQQRFPVAD 366
             SK++ W  +       W+FHSV+D FENGASF    V +GG   KPNYS +Q F V D
Sbjct: 313 IGSKEVTWRKSNHNNGDTWEFHSVKDAFENGASF---TVTKGGRVPKPNYSNEQYFKVVD 372

Query: 367 AKWVRSLTSSSGALRCSSKSRC 380
             +VRSLT SSG L CS  S C
Sbjct: 373 VNFVRSLTRSSGILGCSKTSVC 391

[Close]

BLAST of Carg04726 vs. TrEMBL
Match: tr|A0A2P4GNT8|A0A2P4GNT8_QUESU (Pectate lyase OS=Quercus suber OX=58331 GN=CFP56_05587 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 6.9e-153
Identity = 262/374 (70.05%), Postives = 308/374 (82.35%), Query Frame = 0


Query: 8   VLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTNNVGR 67
           V+ ++S   +S    ++  GLKMNAID CWR NP WRRNRQQL  CSVG+ GKM NN+G+
Sbjct: 21  VIVMLSTPNVSLAKKTKIIGLKMNAIDHCWRWNPDWRRNRQQLATCSVGYAGKMANNIGK 80

Query: 68  NLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTAIDGR 127
            L +Y VTDPSD+PINP+PGTLRYG TMIK K WITF + M I L KPLLISS+T IDGR
Sbjct: 81  GLTQYVVTDPSDNPINPKPGTLRYGTTMIKGKKWITFLRSMRIRLQKPLLISSFTTIDGR 140

Query: 128 GASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAIRLVS 187
           GA+VHI+GNACL++ K +NIIIHGL +HHC++Q    VMGP+S+++SLG VDGDAIRLV+
Sbjct: 141 GANVHIAGNACLMIYKQSNIIIHGLRVHHCRSQPPSTVMGPDSQIISLGQVDGDAIRLVT 200

Query: 188 ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNMRVTV 247
           ASKVW+DHNTLY  EDGLLDVTRGSTDITISNNWF++QDKVILLGH+DG++RDKNM+VTV
Sbjct: 201 ASKVWLDHNTLYESEDGLLDVTRGSTDITISNNWFKNQDKVILLGHDDGFLRDKNMKVTV 260

Query: 248 VYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK--SKQ 307
           +YNHFGPNCNQRMPRIR GYAHV NNLYQGW QYAIGGSMNPSVKS+ANLFIA K  +K+
Sbjct: 261 MYNHFGPNCNQRMPRIRFGYAHVVNNLYQGWMQYAIGGSMNPSVKSQANLFIAPKLGNKE 320

Query: 308 IVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRSLT 367
           + W  G  E   WKF+SV DVFENGA F  I  G GGVKPNY+ +Q F VADA+ VRSLT
Sbjct: 321 VTWRNG--EKGTWKFYSVNDVFENGARF--IETGAGGVKPNYNREQVFQVADARTVRSLT 380

Query: 368 SSSGALRCSSKSRC 380
            S+GALRC+ +SRC
Sbjct: 381 KSAGALRCTPRSRC 390

The following BLAST results are available for this feature:

BLAST of Carg04726 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923821.1	8.0e-222	99.74	putative pectate lyase 2 [Cucurbita moschata]	[more]
XP_023520094.1	6.8e-221	99.47	putative pectate lyase 2 [Cucurbita pepo subsp. pepo]	[more]
XP_023001119.1	1.9e-218	98.42	putative pectate lyase 2 [Cucurbita maxima]	[more]
XP_008439120.1	9.3e-194	86.21	PREDICTED: putative pectate lyase 2 [Cucumis melo]	[more]
KGN63970.1	9.3e-194	85.41	hypothetical protein Csa_1G031910 [Cucumis sativus]	[more]

BLAST of Carg04726 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09280.1	5.5e-116	72.76	Pectin lyase-like superfamily protein	[more]
AT1G11920.1	4.3e-92	46.92	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	4.9e-88	47.45	Pectin lyase-like superfamily protein	[more]
AT4G22080.1	2.1e-86	46.46	root hair specific 14	[more]
AT4G22090.1	3.5e-86	46.46	Pectin lyase-like superfamily protein	[more]

BLAST of Carg04726 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O65388\|PLY2_ARATH	7.7e-91	46.92	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
sp\|Q9C8G4\|PLY4_ARATH	8.8e-87	47.45	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
sp\|O65456\|PLY16_ARATH	3.7e-85	46.46	Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1	[more]
sp\|O65457\|PLY17_ARATH	6.3e-85	46.46	Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1	[more]
sp\|Q9LRM5\|PLY9_ARATH	4.1e-84	45.88	Probable pectate lyase 9 OS=Arabidopsis thaliana OX=3702 GN=At3g24230 PE=2 SV=1	[more]

BLAST of Carg04726 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AY18\|A0A1S3AY18_CUCME	6.1e-194	86.21	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1	[more]
tr\|A0A0A0LPZ1\|A0A0A0LPZ1_CUCSA	6.1e-194	85.41	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1	[more]
tr\|A0A199UA94\|A0A199UA94_MANES	2.4e-153	73.09	Pectate lyase OS=Manihot esculenta OX=3983 GN=MANES_S076100 PE=3 SV=1	[more]
tr\|K7LNC8\|K7LNC8_SOYBN	3.1e-153	69.90	Pectate lyase OS=Glycine max OX=3847 GN=100780437 PE=3 SV=1	[more]
tr\|A0A2P4GNT8\|A0A2P4GNT8_QUESU	6.9e-153	70.05	Pectate lyase OS=Quercus suber OX=58331 GN=CFP56_05587 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR002022	Pec_lyase
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04726-RA	Carg04726-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 115..131 score: 52.1 coord: 179..200 score: 48.7 coord: 259..278 score: 62.62 coord: 281..300 score: 58.57 coord: 78..103 score: 41.94 coord: 350..373 score: 33.53
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 107..304 e-value: 1.5E-67 score: 240.4
IPR002022	Pectate lyase	PFAM	PF00544	Pec_lyase_C	coord: 120..298 e-value: 7.5E-25 score: 87.7
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 30..372 e-value: 7.0E-94 score: 316.6
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 7..379
None	No IPR available	PANTHER	PTHR31683:SF8	PECTATE LYASE	coord: 7..379
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 30..370

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04726	Cla018635	Watermelon (97103) v1	carwmB0386
Carg04726	Csa1G031910	Cucumber (Chinese Long) v2	carcuB0417
Carg04726	MELO3C001958	Melon (DHL92) v3.5.1	carmeB0392
Carg04726	ClCG04G012510	Watermelon (Charleston Gray)	carwcgB0382
Carg04726	CSPI01G05290	Wild cucumber (PI 183967)	carcpiB0421
Carg04726	Cucsa.112490	Cucumber (Gy14) v1	carcgyB0450
Carg04726	CmaCh01G007690	Cucurbita maxima (Rimu)	carcmaB0546
Carg04726	CmoCh13G011610	Cucurbita moschata (Rifu)	carcmoB0526
Carg04726	CmoCh01G008050	Cucurbita moschata (Rifu)	carcmoB0531
Carg04726	Lsi02G000430	Bottle gourd (USVL1VR-Ls)	carlsiB355
Carg04726	Cp4.1LG02g10060	Cucurbita pepo (Zucchini)	carcpeB0545
Carg04726	Cp4.1LG20g00270	Cucurbita pepo (Zucchini)	carcpeB0544
Carg04726	CsGy1G005060	Cucumber (Gy14) v2	carcgybB0395
Carg04726	MELO3C001958.2	Melon (DHL92) v3.6.1	carmedB0396
Carg04726	CsaV3_1G005190	Cucumber (Chinese Long) v3	carcucB0420
Carg04726	Cla97C04G079500	Watermelon (97103) v2	carwmbB0408
Carg04726	Bhi08G001623	Wax gourd	carwgoB0477

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04726	Carg06970	Silver-seed gourd	carcarB414

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04726	Cucurbita maxima (Rimu)	carcmaB0540
Carg04726	Cucurbita maxima (Rimu)	carcmaB0545
Carg04726	Cucurbita moschata (Rifu)	carcmoB0530
Carg04726	Cucurbita pepo (Zucchini)	carcpeB0546
Carg04726	Watermelon (97103) v2	carwmbB0412
Carg04726	Wax gourd	carwgoB0480