Csa1G031910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G031910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPectate lyase family protein; contains IPR011050 (Pectin lyase fold/virulence factor), IPR018082 (AmbAllergen)
LocationChr1 : 3427507 .. 3428852 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAGTACTACTACTCAACAACTCTCTGTTCTGTCTCTCATTTCCTTCATTCTTCTGATCTCTACCGCAGTTTCTTATTCAGAAGCCCATGGCTTAAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAAAAACAGACAACAACTCGCCACTTGTTCAGTAGGTTTCGCCGGAAAAATGACCAACAACATGGGAAGAAATCTCATGCACTACCAAGTCACTGACCCAAGCGATGACCCTATAAACCCACGTCCAGGTACTCTCAGATACGGCGCCACAATGATCAAACACAAAGTCTGGATCACATTTAAAAAAGACATGCACATTGTGCTTCAGAAGCCTCTTCTTGTCAGCAGCTTCACCGCCATCGACGGCCGAGGCTCCACCGTCCACATCACCGGAAACGCCTGTCTGATGGTGGTCAGAGCCACCAACATTATAATCCACGGCCTTATCATCCACCACTGCAAGTCTCAGGCGGCGGGTCAAGTCATGGGTCCCAATGCTAAGGTAATTTCACTTGGAAACGTGGACGGAGATGCCATCCGTTTAGTAACGGCCTCGAAAGTTTGGATTGACCACAACACGCTGTACCGGTGCGAGGATGGGTTGCTCGACGTCACCCGTGGGTCCACTGACATAACCATTTCCAACAATTGGTTCCGGGACCAAGACAAGGTTATTCTTCTTGGTCATGATGATGGCTATGTTAGAGATCGGAGCATGAGAGTCACTGTCCTCTATAACCATTTTGGACCAAATTGTAACCAAAGAATGCCCAGGTATAATTTATTTAAATATCGTTTATGAAATTAATCAATTAATTAAAACTAAACTAACATTCCTAAGCATTTCATAATATTAATATCTTTTAGGTAACCATATGTGTAGGATTCGATATGGGTATGCACACGTTGCAAACAATTTATACCAAGGTTGGACGCAATACGCAATCGGAGGGAGCATGAACCCGAGCGTGAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAAGTAACAATAATAATAGAGTTTGGATTTTATAAATAGTTTTACAATATACAGTATTGATTTTGTGCTTTTTTGTTAATGGCAGGTCATATGGAGCACAGGGAAAGTAGAGGAGGCAAAATGGAAGTTTCACTCAGTGAGAGACGCATTTGAAAACGGAGCATCGTTTGCAGAAATTGGAGTGGGGAAAGGAAGAGTAAAGCCAAATTACAATCCCCAACAGCGGTTTCCAGTGGCAGATGCTAAGTGGATCAGAGCATTGACAAGCTCATCCGGGGCATTGCGCTGCACATCAAATTCTAAATGCTGA

mRNA sequence

ATGACCAGTACTACTACTCAACAACTCTCTGTTCTGTCTCTCATTTCCTTCATTCTTCTGATCTCTACCGCAGTTTCTTATTCAGAAGCCCATGGCTTAAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAAAAACAGACAACAACTCGCCACTTGTTCAGTAGGTTTCGCCGGAAAAATGACCAACAACATGGGAAGAAATCTCATGCACTACCAAGTCACTGACCCAAGCGATGACCCTATAAACCCACGTCCAGGTACTCTCAGATACGGCGCCACAATGATCAAACACAAAGTCTGGATCACATTTAAAAAAGACATGCACATTGTGCTTCAGAAGCCTCTTCTTGTCAGCAGCTTCACCGCCATCGACGGCCGAGGCTCCACCGTCCACATCACCGGAAACGCCTGTCTGATGGTGGTCAGAGCCACCAACATTATAATCCACGGCCTTATCATCCACCACTGCAAGTCTCAGGCGGCGGGTCAAGTCATGGGTCCCAATGCTAAGGTAATTTCACTTGGAAACGTGGACGGAGATGCCATCCGTTTAGTAACGGCCTCGAAAGTTTGGATTGACCACAACACGCTGTACCGGTGCGAGGATGGGTTGCTCGACGTCACCCGTGGGTCCACTGACATAACCATTTCCAACAATTGGTTCCGGGACCAAGACAAGGTTATTCTTCTTGGTCATGATGATGGCTATGTTAGAGATCGGAGCATGAGAGTCACTGTCCTCTATAACCATTTTGGACCAAATTGTAACCAAAGAATGCCCAGGATTCGATATGGGTATGCACACGTTGCAAACAATTTATACCAAGGTTGGACGCAATACGCAATCGGAGGGAGCATGAACCCGAGCGTGAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAAGTCATATGGAGCACAGGGAAAGTAGAGGAGGCAAAATGGAAGTTTCACTCAGTGAGAGACGCATTTGAAAACGGAGCATCGTTTGCAGAAATTGGAGTGGGGAAAGGAAGAGTAAAGCCAAATTACAATCCCCAACAGCGGTTTCCAGTGGCAGATGCTAAGTGGATCAGAGCATTGACAAGCTCATCCGGGGCATTGCGCTGCACATCAAATTCTAAATGCTGA

Coding sequence (CDS)

ATGACCAGTACTACTACTCAACAACTCTCTGTTCTGTCTCTCATTTCCTTCATTCTTCTGATCTCTACCGCAGTTTCTTATTCAGAAGCCCATGGCTTAAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAAAAACAGACAACAACTCGCCACTTGTTCAGTAGGTTTCGCCGGAAAAATGACCAACAACATGGGAAGAAATCTCATGCACTACCAAGTCACTGACCCAAGCGATGACCCTATAAACCCACGTCCAGGTACTCTCAGATACGGCGCCACAATGATCAAACACAAAGTCTGGATCACATTTAAAAAAGACATGCACATTGTGCTTCAGAAGCCTCTTCTTGTCAGCAGCTTCACCGCCATCGACGGCCGAGGCTCCACCGTCCACATCACCGGAAACGCCTGTCTGATGGTGGTCAGAGCCACCAACATTATAATCCACGGCCTTATCATCCACCACTGCAAGTCTCAGGCGGCGGGTCAAGTCATGGGTCCCAATGCTAAGGTAATTTCACTTGGAAACGTGGACGGAGATGCCATCCGTTTAGTAACGGCCTCGAAAGTTTGGATTGACCACAACACGCTGTACCGGTGCGAGGATGGGTTGCTCGACGTCACCCGTGGGTCCACTGACATAACCATTTCCAACAATTGGTTCCGGGACCAAGACAAGGTTATTCTTCTTGGTCATGATGATGGCTATGTTAGAGATCGGAGCATGAGAGTCACTGTCCTCTATAACCATTTTGGACCAAATTGTAACCAAAGAATGCCCAGGATTCGATATGGGTATGCACACGTTGCAAACAATTTATACCAAGGTTGGACGCAATACGCAATCGGAGGGAGCATGAACCCGAGCGTGAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAAGTCATATGGAGCACAGGGAAAGTAGAGGAGGCAAAATGGAAGTTTCACTCAGTGAGAGACGCATTTGAAAACGGAGCATCGTTTGCAGAAATTGGAGTGGGGAAAGGAAGAGTAAAGCCAAATTACAATCCCCAACAGCGGTTTCCAGTGGCAGATGCTAAGTGGATCAGAGCATTGACAAGCTCATCCGGGGCATTGCGCTGCACATCAAATTCTAAATGCTGA

Protein sequence

MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC*
Homology
[Close]
BLAST of Csa1G031910 vs. Swiss-Prot
Match: PLY2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 2.2e-90
Identity = 174/385 (45.19%), Postives = 233/385 (60.52%), Query Frame = 1 

Query: 9   LSVLSLISFILLISTAVSYSEAHGLNM-----NAIDRCWRSNPYWRKNRQQLATCSVGFA 68
           L+++SL+ F    S+ V  + ++G  +     N ID CWR NPYW  NR+ LA C+VGF 
Sbjct: 6   LTIISLL-FAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFG 65

Query: 69  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 128
                  G+    Y VT+PSDDP NPRPGTLRY     K  +WITF +DM IVL+  L++
Sbjct: 66  KSAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSK-PLWITFARDMVIVLRNELIM 125

Query: 129 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 188
           +S+  IDGRG+ V I    C+ +   +++IIHG+ IH CK   +G+V      V S    
Sbjct: 126 NSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGS 185

Query: 189 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 248
           DGDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V
Sbjct: 186 DGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNV 245

Query: 249 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 308
            D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F
Sbjct: 246 EDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYF 305

Query: 309 IASKSKQVIWSTGKVEEA----KWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFP 368
           +AS        T +++      +WK+ + +D F+NGA F  +  G G V P Y   +RFP
Sbjct: 306 VASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFP 365

Query: 369 VADAKWIRALTSSSGALRCTSNSKC 385
           V+    +  LTSS+G L C S   C
Sbjct: 366 VSHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]
BLAST of Csa1G031910 vs. Swiss-Prot
Match: PLY4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.7e-85
Identity = 174/386 (45.08%), Postives = 232/386 (60.10%), Query Frame = 1 

Query: 10  SVLSLISFIL------LISTAVSYS-EAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGF 69
           S++ ++S +L      L+ TA SY+  A  +++N ID CWR NP W  NRQ LA C+VG+
Sbjct: 3   SLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY 62

Query: 70  AGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLL 129
            GK     G+N   Y VT+PSD+P  P PGTLRY  +  K  +WITF +DM IVL+  L+
Sbjct: 63  -GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPK-PLWITFARDMVIVLKSQLM 122

Query: 130 VSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGN 189
           ++S+  IDGRG+ V I    CL + +  ++IIHG+ IH CK+   G              
Sbjct: 123 INSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG-------------- 182

Query: 190 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 249
           +DGD IR+  ++ VWIDH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y
Sbjct: 183 MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSY 242

Query: 250 VRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 309
           + D+ MRVT+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N 
Sbjct: 243 MGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNY 302

Query: 310 FIASKSKQVIWSTGKV----EEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRF 369
           F+A + +     T ++    +  +WK+ + RD F NGA F   GV    V+P Y   + F
Sbjct: 303 FVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGF 362

Query: 370 PVADAKWIRALTSSSGALRCTSNSKC 385
            VA    + +LTSS+G LRC     C
Sbjct: 363 RVAHGSLVPSLTSSAGPLRCYVGRIC 368

[Close]
BLAST of Csa1G031910 vs. Swiss-Prot
Match: PLY16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.2e-83
Identity = 163/353 (46.18%), Postives = 207/353 (58.64%), Query Frame = 1 

Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L+  L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK    G V      V      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK+V     K     W++ + +D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Csa1G031910 vs. Swiss-Prot
Match: PLY17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-83
Identity = 163/353 (46.18%), Postives = 207/353 (58.64%), Query Frame = 1 

Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L   L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK   +G+V      V      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK+V     K     W++ +  D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Csa1G031910 vs. Swiss-Prot
Match: PLY9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.9e-82
Identity = 161/357 (45.10%), Postives = 208/357 (58.26%), Query Frame = 1 

Query: 34  NMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPI-NPRPG 93
           N N ID CWR +  W KNR+ LA C +GF  K     GRN  +Y VTD SDD + NP+PG
Sbjct: 102 NGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFG--GRNGSYYVVTDHSDDDVVNPKPG 161

Query: 94  TLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNI 153
           TLR+    ++  +WI FK+DM I L++ L+++SF  ID RG+ VHI   AC+ +   TN+
Sbjct: 162 TLRHAVIQVE-PLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNV 221

Query: 154 IIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLD 213
           I+HGL IH CK      V    ++    G  DGDAI +  +S +WIDHN+L  C DGL+D
Sbjct: 222 IVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVD 281

Query: 214 VTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGY 273
           V  GST ITISNN F   D+V+LLGH+D Y RD+ M+VTV YNHFG    QRMPR R+GY
Sbjct: 282 VVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGY 341

Query: 274 AHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKV-----EEAKWKFHS 333
            HV NN Y  W  YAIGGS NP++ S+ N F A K+      T ++     E  +W + S
Sbjct: 342 FHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRS 401

Query: 334 VRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
            +D   NGA F   G G        +     P   A  + A+T+S+GAL C     C
Sbjct: 402 EKDLLVNGAFFTPSGEGASGDSQTLS----LPAKPASMVDAITASAGALSCRRGKPC 451

[Close]
BLAST of Csa1G031910 vs. TrEMBL
Match: A0A0A0LPZ1_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 790.4 bits (2040), Expect = 9.7e-226
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 1 

Query: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60
           MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV
Sbjct: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60

Query: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120
           GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP
Sbjct: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120

Query: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180
           LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL
Sbjct: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180

Query: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240
           GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD
Sbjct: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240

Query: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300
           GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA
Sbjct: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300

Query: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360
           NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV
Sbjct: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360

Query: 361 ADAKWIRALTSSSGALRCTSNSKC 385
           ADAKWIRALTSSSGALRCTSNSKC
Sbjct: 361 ADAKWIRALTSSSGALRCTSNSKC 384

[Close]
BLAST of Csa1G031910 vs. TrEMBL
Match: A0A067KZ75_JATCU (Pectate lyase OS=Jatropha curcas GN=JCGZ_15918 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 9.3e-152
Identity = 248/348 (71.26%), Postives = 300/348 (86.21%), Query Frame = 1 

Query: 34  NMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGT 93
           N+NAID CWR NP+WR++RQQLA CS+GFAGKM NN+G+N++ Y+VTDPSDDP+NP+PGT
Sbjct: 25  NINAIDSCWRQNPHWRRSRQQLAKCSIGFAGKMINNIGKNVIRYKVTDPSDDPLNPKPGT 84

Query: 94  LRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNII 153
           LRYGAT+IK KVWITF+K+MHI L KPLL+SSFTA+DGRG ++HITGNACL++ + +N+I
Sbjct: 85  LRYGATLIKEKVWITFQKNMHIKLDKPLLISSFTALDGRGVSIHITGNACLLLYKVSNVI 144

Query: 154 IHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDV 213
           IHGL IHHCK+ A G V GP+ K++ L  +DGDAIRLVTASKVWIDHNTLY C+DGLLDV
Sbjct: 145 IHGLNIHHCKASAPGSVRGPDGKIMPLSQMDGDAIRLVTASKVWIDHNTLYACQDGLLDV 204

Query: 214 TRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYA 273
           TRGST  TISNNWFRDQDKV+LLGHDDGY RD++M+VTV+YNHFGPNCNQRMPR+RYGYA
Sbjct: 205 TRGSTSTTISNNWFRDQDKVMLLGHDDGYFRDKNMKVTVVYNHFGPNCNQRMPRVRYGYA 264

Query: 274 HVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS--KQVIWSTGKVEEAK-WKFHSVRD 333
           HV NN YQGW QYAIGGSMNPS+KSEAN F+  KS  K+V W  G  E+++ W F+S RD
Sbjct: 265 HVVNNFYQGWEQYAIGGSMNPSIKSEANCFVPLKSGKKEVTWRNGINEKSQPWNFYSSRD 324

Query: 334 AFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRC 379
            FENGASF + G G G+ KPNYN QQ+F VADAK+++++TSSSGAL+C
Sbjct: 325 IFENGASFIQSG-GIGKAKPNYNDQQKFEVADAKFVKSITSSSGALKC 371

[Close]
BLAST of Csa1G031910 vs. TrEMBL
Match: G7KAU7_MEDTR (Pectate lyase OS=Medicago truncatula GN=MTR_5g019160 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 3.5e-151
Identity = 266/379 (70.18%), Postives = 307/379 (81.00%), Query Frame = 1 

Query: 9   LSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTN 68
           L+V+  I F    S A   ++  GL MN IDRCWR NP WRK+RQQLATCSVG+AGKMTN
Sbjct: 15  LAVVITIFFTSKFSFA-KQTKLMGLKMNMIDRCWRPNPEWRKHRQQLATCSVGYAGKMTN 74

Query: 69  NMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTA 128
           N+G+ ++ Y+VTDP+DDPINP+PGTLRYGA++I+ KVWITFKKDM+I L K LL+SSFT 
Sbjct: 75  NIGKGIIQYKVTDPNDDPINPQPGTLRYGASVIQGKVWITFKKDMNIKLIKSLLISSFTT 134

Query: 129 IDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAI 188
           IDGRG  VHI  NACLM+ +ATNIIIH + IHHCK+Q  G VMGPN KVISLG VDGDAI
Sbjct: 135 IDGRGVNVHIADNACLMIFKATNIIIHSIRIHHCKAQTPGMVMGPNGKVISLGQVDGDAI 194

Query: 189 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSM 248
           RLVTASK+WIDHNTLY CEDGLLDVTRGST++T+SNNWFR+QDKV+LLGHDDGYVRD +M
Sbjct: 195 RLVTASKIWIDHNTLYDCEDGLLDVTRGSTNVTVSNNWFREQDKVMLLGHDDGYVRDINM 254

Query: 249 RVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK- 308
           +VTV+YNHFGPNCNQRMPRIR+GYAHVANNLY GW QYAIGGSM PS+KSE+NLFIA K 
Sbjct: 255 KVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWMQYAIGGSMGPSLKSESNLFIAPKV 314

Query: 309 -SKQVIW-STGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKW 368
            SK+V W   G     KW+FHSVRDAFENGASFA I  G    KPNY+ +Q F V D K 
Sbjct: 315 GSKEVTWRKIGHGNGDKWEFHSVRDAFENGASFA-ISKGSRVPKPNYSKEQGFKVVDVKS 374

Query: 369 IRALTSSSGALRCTSNSKC 385
           +R LT SSGA +C+  S C
Sbjct: 375 VRTLTRSSGAFQCSRTSIC 391

[Close]
BLAST of Csa1G031910 vs. TrEMBL
Match: G7KAT9_MEDTR (Pectate lyase OS=Medicago truncatula GN=MTR_5g019090 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.0e-150
Identity = 262/379 (69.13%), Postives = 305/379 (80.47%), Query Frame = 1 

Query: 9   LSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTN 68
           L+++  I F    S A   S+  GL MN IDRCWR NP WRK+RQQL TCS+G+AGKMTN
Sbjct: 15  LAIVITIFFTSKFSFA-KQSKLMGLKMNMIDRCWRPNPEWRKHRQQLVTCSIGYAGKMTN 74

Query: 69  NMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTA 128
           N+G+ L HY+VT+P+DDPINP+ GTLRYGA++I+ KVWITFKKDM I L KPLL+SSFT 
Sbjct: 75  NIGKGLTHYKVTNPNDDPINPQRGTLRYGASVIQGKVWITFKKDMDIKLMKPLLISSFTT 134

Query: 129 IDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAI 188
           IDGRG  VH+  NACLM+ + TNIIIH + IHHCK+Q  G VMGPN KVI LG VDGDAI
Sbjct: 135 IDGRGVNVHVADNACLMISKVTNIIIHNIRIHHCKAQTPGMVMGPNGKVIHLGQVDGDAI 194

Query: 189 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSM 248
           RLVTASK+WIDHNTLY CEDGLLDVTRGST++T+SNNWFR+QDKV+LLGHDDGYVRD +M
Sbjct: 195 RLVTASKIWIDHNTLYDCEDGLLDVTRGSTNVTVSNNWFREQDKVMLLGHDDGYVRDINM 254

Query: 249 RVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK- 308
           +VTV+YNHFGPNCNQRMPRIR+GYAHVANNLY GW QYAIGGSM PS+KSE+NLFIA K 
Sbjct: 255 KVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWMQYAIGGSMGPSLKSESNLFIAPKV 314

Query: 309 -SKQVIW-STGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKW 368
            SK+V W   G     KW+FHSVRD+FENGASFA +  G    KPNYN +Q F VAD K 
Sbjct: 315 GSKEVTWRKIGHTNGDKWEFHSVRDSFENGASFA-VTKGSRVQKPNYNKEQIFQVADVKS 374

Query: 369 IRALTSSSGALRCTSNSKC 385
           +R LT SSGA++C+  S C
Sbjct: 375 VRFLTRSSGAIQCSKTSGC 391

[Close]
BLAST of Csa1G031910 vs. TrEMBL
Match: V7C1M3_PHAVU (Pectate lyase OS=Phaseolus vulgaris GN=PHAVU_004G098100g PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.8e-150
Identity = 255/379 (67.28%), Postives = 305/379 (80.47%), Query Frame = 1 

Query: 7   QQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKM 66
           + L +   I F LL  +    S+ +GL MN IDRCWR NP WR++R QLATCSVG+ GKM
Sbjct: 7   RHLFLSCFIFFFLLNLSFAKQSKKNGLEMNVIDRCWRQNPEWRRHRSQLATCSVGYVGKM 66

Query: 67  TNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSF 126
            NN+G +L+HY+VTD SDDPINP+P TLRYG ++I+ KVWITF+KDMHI L+KPLL+SSF
Sbjct: 67  INNIGNDLIHYKVTDSSDDPINPKPNTLRYGTSIIQGKVWITFQKDMHIKLEKPLLISSF 126

Query: 127 TAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGD 186
           T IDGRG  +HI  +ACLM+ +ATNIIIHG+ +HHCK Q  G VMGP  KVISLG VDGD
Sbjct: 127 TTIDGRGVNIHIADSACLMIFKATNIIIHGIRVHHCKPQPPGIVMGPEGKVISLGQVDGD 186

Query: 187 AIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDR 246
           AIRLVTASK+WIDHNTLY C+DGLLDVTRGSTD+TISNNWF++QDKV+LLGHDDGYVRD+
Sbjct: 187 AIRLVTASKIWIDHNTLYDCQDGLLDVTRGSTDVTISNNWFKNQDKVMLLGHDDGYVRDQ 246

Query: 247 SMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIAS 306
           +M+VTV+YNHFGPNCNQRMPRIR+GYAHVANN YQGW QYAIGGSM PS+KSEANLF+A 
Sbjct: 247 NMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNFYQGWLQYAIGGSMKPSLKSEANLFVAP 306

Query: 307 K--SKQVIWSTGKVE-EAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 366
              +K+V W  G  + E +W FHS+RD FENGASF  +  G+G  KPNY+ +Q F V DA
Sbjct: 307 SIGNKEVTWRKGNDKGEDRWNFHSIRDVFENGASF-NVTKGRGVQKPNYSKEQNFIVVDA 366

Query: 367 KWIRALTSSSGALRCTSNS 383
           K++R LT SSG LR   N+
Sbjct: 367 KFVRLLTRSSGVLRYNKNN 384

[Close]
BLAST of Csa1G031910 vs. TAIR10
Match: AT5G09280.1 (AT5G09280.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 399.4 bits (1025), Expect = 2.4e-111
Identity = 182/255 (71.37%), Postives = 220/255 (86.27%), Query Frame = 1 

Query: 66  MTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSS 125
           MT N+G+ +  Y+VTDPSDDP+NP+PGTLRYGAT++K K WITFK++M I L KPLL+SS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 126 FTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDG 185
           FTA+DGRG++VHI+G ACL+V RAT++IIHGL IH CK+     VMGP++K+I LG++DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 186 DAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 245
           DAIRLVTA KVWIDHNTLY CEDGLLDVT GSTD+T+SNNWFR+QDKV+LLGHDDGYV+D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 246 RSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 305
           + MRVTV++NHFGPNCNQRMPR+R+GYAHVANN YQGWTQYAIGGSM+P VKSE+N F+A
Sbjct: 181 KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA 240

Query: 306 SK--SKQVIWSTGKV 319
            K  SK+V+   G +
Sbjct: 241 PKSGSKEVLEKHGPI 255

[Close]
BLAST of Csa1G031910 vs. TAIR10
Match: AT1G11920.1 (AT1G11920.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 334.0 bits (855), Expect = 1.3e-91
Identity = 174/385 (45.19%), Postives = 233/385 (60.52%), Query Frame = 1 

Query: 9   LSVLSLISFILLISTAVSYSEAHGLNM-----NAIDRCWRSNPYWRKNRQQLATCSVGFA 68
           L+++SL+ F    S+ V  + ++G  +     N ID CWR NPYW  NR+ LA C+VGF 
Sbjct: 6   LTIISLL-FAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFG 65

Query: 69  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 128
                  G+    Y VT+PSDDP NPRPGTLRY     K  +WITF +DM IVL+  L++
Sbjct: 66  KSAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSK-PLWITFARDMVIVLRNELIM 125

Query: 129 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 188
           +S+  IDGRG+ V I    C+ +   +++IIHG+ IH CK   +G+V      V S    
Sbjct: 126 NSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGS 185

Query: 189 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 248
           DGDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V
Sbjct: 186 DGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNV 245

Query: 249 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 308
            D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F
Sbjct: 246 EDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYF 305

Query: 309 IASKSKQVIWSTGKVEEA----KWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFP 368
           +AS        T +++      +WK+ + +D F+NGA F  +  G G V P Y   +RFP
Sbjct: 306 VASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFP 365

Query: 369 VADAKWIRALTSSSGALRCTSNSKC 385
           V+    +  LTSS+G L C S   C
Sbjct: 366 VSHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]
BLAST of Csa1G031910 vs. TAIR10
Match: AT1G30350.1 (AT1G30350.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 316.6 bits (810), Expect = 2.1e-86
Identity = 174/386 (45.08%), Postives = 232/386 (60.10%), Query Frame = 1 

Query: 10  SVLSLISFIL------LISTAVSYS-EAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGF 69
           S++ ++S +L      L+ TA SY+  A  +++N ID CWR NP W  NRQ LA C+VG+
Sbjct: 3   SLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY 62

Query: 70  AGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLL 129
            GK     G+N   Y VT+PSD+P  P PGTLRY  +  K  +WITF +DM IVL+  L+
Sbjct: 63  -GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPK-PLWITFARDMVIVLKSQLM 122

Query: 130 VSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGN 189
           ++S+  IDGRG+ V I    CL + +  ++IIHG+ IH CK+   G              
Sbjct: 123 INSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG-------------- 182

Query: 190 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 249
           +DGD IR+  ++ VWIDH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y
Sbjct: 183 MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSY 242

Query: 250 VRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 309
           + D+ MRVT+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N 
Sbjct: 243 MGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNY 302

Query: 310 FIASKSKQVIWSTGKV----EEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRF 369
           F+A + +     T ++    +  +WK+ + RD F NGA F   GV    V+P Y   + F
Sbjct: 303 FVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGF 362

Query: 370 PVADAKWIRALTSSSGALRCTSNSKC 385
            VA    + +LTSS+G LRC     C
Sbjct: 363 RVAHGSLVPSLTSSAGPLRCYVGRIC 368

[Close]
BLAST of Csa1G031910 vs. TAIR10
Match: AT4G22080.1 (AT4G22080.1 root hair specific 14)

HSP 1 Score: 311.6 bits (797), Expect = 6.7e-85
Identity = 163/353 (46.18%), Postives = 207/353 (58.64%), Query Frame = 1 

Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L+  L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK    G V      V      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK+V     K     W++ + +D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Csa1G031910 vs. TAIR10
Match: AT4G22090.1 (AT4G22090.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-84
Identity = 163/353 (46.18%), Postives = 207/353 (58.64%), Query Frame = 1 

Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L   L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK   +G+V      V      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK+V     K     W++ +  D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]
BLAST of Csa1G031910 vs. NCBI nr
Match: gi|700208874|gb|KGN63970.1| (hypothetical protein Csa_1G031910 [Cucumis sativus])

HSP 1 Score: 790.4 bits (2040), Expect = 1.4e-225
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 1 

Query: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60
           MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV
Sbjct: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60

Query: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120
           GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP
Sbjct: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120

Query: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180
           LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL
Sbjct: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180

Query: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240
           GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD
Sbjct: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240

Query: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300
           GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA
Sbjct: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300

Query: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360
           NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV
Sbjct: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360

Query: 361 ADAKWIRALTSSSGALRCTSNSKC 385
           ADAKWIRALTSSSGALRCTSNSKC
Sbjct: 361 ADAKWIRALTSSSGALRCTSNSKC 384

[Close]
BLAST of Csa1G031910 vs. NCBI nr
Match: gi|659066329|ref|XP_008439120.1| (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 748.0 bits (1930), Expect = 7.9e-213
Identity = 357/381 (93.70%), Postives = 372/381 (97.64%), Query Frame = 1 

Query: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63
           T TQQLSVLSLISFI LIS  VS SEAHGL+MNAIDRCWRSNPYWR+NRQQLATCSVGFA
Sbjct: 2   TITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFA 61

Query: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123
           GKMTNNMGRNL+HYQVTDPSDDPINPRPGTLRYGATMIKHKVWITF+KDMHIVLQKPLL+
Sbjct: 62  GKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLI 121

Query: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183
           SSFTAIDGRG+TVHITGNACLMV+RATNIIIHGLIIHHC+SQAAG+VMGPN+KVISLG+V
Sbjct: 122 SSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHV 181

Query: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243
           DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 182 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241

Query: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303
           RDR+M+VTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 242 RDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301

Query: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363
           IASKSKQVIWSTG VEEAKWKFHSVRD FENGA F EIGVG+GRVKPNYNPQQRFPVADA
Sbjct: 302 IASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADA 361

Query: 364 KWIRALTSSSGALRCTSNSKC 385
           KWIRALTSSSGALRCTSNSKC
Sbjct: 362 KWIRALTSSSGALRCTSNSKC 382

[Close]
BLAST of Csa1G031910 vs. NCBI nr
Match: gi|778664740|ref|XP_004137574.2| (PREDICTED: putative pectate lyase 2 [Cucumis sativus])

HSP 1 Score: 661.0 bits (1704), Expect = 1.3e-186
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1 

Query: 66  MTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSS 125
           MTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSS
Sbjct: 1   MTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSS 60

Query: 126 FTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDG 185
           FTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDG
Sbjct: 61  FTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDG 120

Query: 186 DAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 245
           DAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD
Sbjct: 121 DAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 180

Query: 246 RSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 305
           RSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA
Sbjct: 181 RSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 240

Query: 306 SKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKW 365
           SKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKW
Sbjct: 241 SKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKW 300

Query: 366 IRALTSSSGALRCTSNSKC 385
           IRALTSSSGALRCTSNSKC
Sbjct: 301 IRALTSSSGALRCTSNSKC 319

[Close]
BLAST of Csa1G031910 vs. NCBI nr
Match: gi|643734841|gb|KDP41511.1| (hypothetical protein JCGZ_15918 [Jatropha curcas])

HSP 1 Score: 544.7 bits (1402), Expect = 1.3e-151
Identity = 248/348 (71.26%), Postives = 300/348 (86.21%), Query Frame = 1 

Query: 34  NMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGT 93
           N+NAID CWR NP+WR++RQQLA CS+GFAGKM NN+G+N++ Y+VTDPSDDP+NP+PGT
Sbjct: 25  NINAIDSCWRQNPHWRRSRQQLAKCSIGFAGKMINNIGKNVIRYKVTDPSDDPLNPKPGT 84

Query: 94  LRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNII 153
           LRYGAT+IK KVWITF+K+MHI L KPLL+SSFTA+DGRG ++HITGNACL++ + +N+I
Sbjct: 85  LRYGATLIKEKVWITFQKNMHIKLDKPLLISSFTALDGRGVSIHITGNACLLLYKVSNVI 144

Query: 154 IHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDV 213
           IHGL IHHCK+ A G V GP+ K++ L  +DGDAIRLVTASKVWIDHNTLY C+DGLLDV
Sbjct: 145 IHGLNIHHCKASAPGSVRGPDGKIMPLSQMDGDAIRLVTASKVWIDHNTLYACQDGLLDV 204

Query: 214 TRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYA 273
           TRGST  TISNNWFRDQDKV+LLGHDDGY RD++M+VTV+YNHFGPNCNQRMPR+RYGYA
Sbjct: 205 TRGSTSTTISNNWFRDQDKVMLLGHDDGYFRDKNMKVTVVYNHFGPNCNQRMPRVRYGYA 264

Query: 274 HVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS--KQVIWSTGKVEEAK-WKFHSVRD 333
           HV NN YQGW QYAIGGSMNPS+KSEAN F+  KS  K+V W  G  E+++ W F+S RD
Sbjct: 265 HVVNNFYQGWEQYAIGGSMNPSIKSEANCFVPLKSGKKEVTWRNGINEKSQPWNFYSSRD 324

Query: 334 AFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRC 379
            FENGASF + G G G+ KPNYN QQ+F VADAK+++++TSSSGAL+C
Sbjct: 325 IFENGASFIQSG-GIGKAKPNYNDQQKFEVADAKFVKSITSSSGALKC 371

[Close]
BLAST of Csa1G031910 vs. NCBI nr
Match: gi|502082100|ref|XP_004487065.1| (PREDICTED: probable pectate lyase 4 [Cicer arietinum])

HSP 1 Score: 544.7 bits (1402), Expect = 1.3e-151
Identity = 264/379 (69.66%), Postives = 308/379 (81.27%), Query Frame = 1 

Query: 9   LSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTN 68
           L+V+ ++ F    S+A   S+  GL MN IDRCWR NP WR+ RQQLA CS+G+ GKM N
Sbjct: 15  LAVVVIVIFTPKFSSA-KQSKLVGLKMNMIDRCWRPNPEWRRYRQQLAFCSIGYVGKMIN 74

Query: 69  NMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTA 128
           N+G +L+HY+V D +DDPINP+PGTLRYGA++I+ KVWITF+KDM+I L KPLL+SSFT 
Sbjct: 75  NVGNDLIHYKVIDSNDDPINPKPGTLRYGASVIQGKVWITFQKDMNIKLMKPLLISSFTT 134

Query: 129 IDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAI 188
           IDGRG+TVHI  NACLM+ + TNIIIH + IHHCK+QA G VMGPN KVISLG VDGDAI
Sbjct: 135 IDGRGATVHIADNACLMIYKTTNIIIHNIRIHHCKAQAPGMVMGPNGKVISLGQVDGDAI 194

Query: 189 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSM 248
           RLVTASK+WIDHNTLY CEDGLLDVTRGSTD+TISNNWFR+QDKV+LLGHDDGYVRD++M
Sbjct: 195 RLVTASKIWIDHNTLYSCEDGLLDVTRGSTDVTISNNWFREQDKVMLLGHDDGYVRDKNM 254

Query: 249 RVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK- 308
           +VTV+YNHFGPNCNQRMPRIR+GYAHVANNLY GW QYAIGGSM PS+KSEANLFIA K 
Sbjct: 255 KVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWMQYAIGGSMGPSLKSEANLFIAPKV 314

Query: 309 -SKQVIW-STGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKW 368
            SK+V W   G     KW+F+SVRDAFENGASF  +  G    KPNYN +Q F V D K 
Sbjct: 315 GSKEVTWRKDGYKNVDKWEFYSVRDAFENGASFV-VTKGGSVPKPNYNKEQGFKVVDVKS 374

Query: 369 IRALTSSSGALRCTSNSKC 385
           +R+LT SSGA RC+  S C
Sbjct: 375 VRSLTRSSGAFRCSRTSIC 391

The following BLAST results are available for this feature:
BLAST of Csa1G031910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLY2_ARATH2.2e-9045.19Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2[more]
PLY4_ARATH3.7e-8545.08Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1[more]
PLY16_ARATH1.2e-8346.18Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1[more]
PLY17_ARATH2.0e-8346.18Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1[more]
PLY9_ARATH2.9e-8245.10Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1[more]
BLAST of Csa1G031910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPZ1_CUCSA9.7e-226100.00Pectate lyase OS=Cucumis sativus GN=Csa_1G031910 PE=3 SV=1[more]
A0A067KZ75_JATCU9.3e-15271.26Pectate lyase OS=Jatropha curcas GN=JCGZ_15918 PE=3 SV=1[more]
G7KAU7_MEDTR3.5e-15170.18Pectate lyase OS=Medicago truncatula GN=MTR_5g019160 PE=3 SV=1[more]
G7KAT9_MEDTR1.0e-15069.13Pectate lyase OS=Medicago truncatula GN=MTR_5g019090 PE=3 SV=1[more]
V7C1M3_PHAVU1.8e-15067.28Pectate lyase OS=Phaseolus vulgaris GN=PHAVU_004G098100g PE=3 SV=1[more]
BLAST of Csa1G031910 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09280.12.4e-11171.37 Pectin lyase-like superfamily protein[more]
AT1G11920.11.3e-9145.19 Pectin lyase-like superfamily protein[more]
AT1G30350.12.1e-8645.08 Pectin lyase-like superfamily protein[more]
AT4G22080.16.7e-8546.18 root hair specific 14[more]
AT4G22090.11.1e-8446.18 Pectin lyase-like superfamily protein[more]
BLAST of Csa1G031910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208874|gb|KGN63970.1|1.4e-225100.00hypothetical protein Csa_1G031910 [Cucumis sativus][more]
gi|659066329|ref|XP_008439120.1|7.9e-21393.70PREDICTED: putative pectate lyase 2 [Cucumis melo][more]
gi|778664740|ref|XP_004137574.2|1.3e-186100.00PREDICTED: putative pectate lyase 2 [Cucumis sativus][more]
gi|643734841|gb|KDP41511.1|1.3e-15171.26hypothetical protein JCGZ_15918 [Jatropha curcas][more]
gi|502082100|ref|XP_004487065.1|1.3e-15169.66PREDICTED: probable pectate lyase 4 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002022Pec_lyase
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
IPR018082AmbAllergen
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045490 pectin catabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0030570 pectate lyase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043167 ion binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G031910.1Csa1G031910.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002022Pectate lyase/Amb allergenPFAMPF00544Pec_lyase_Ccoord: 125..303
score: 8.4
IPR002022Pectate lyase/Amb allergenSMARTSM00656amb_allcoord: 112..309
score: 3.5
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 35..375
score: 1.01
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 36..375
score: 3.7
IPR018082AmbAllergenPRINTSPR00807AMBALLERGENcoord: 58..75
score: 4.2E-34coord: 286..305
score: 4.2E-34coord: 264..283
score: 4.2E-34coord: 184..205
score: 4.2E-34coord: 120..136
score: 4.2E-34coord: 355..378
score: 4.2
NoneNo IPR availablePANTHERPTHR31683FAMILY NOT NAMEDcoord: 1..384
score: 3.0E
NoneNo IPR availablePANTHERPTHR31683:SF8MAJOR POLLEN ALLERGEN-LIKE PROTEINcoord: 1..384
score: 3.0E