Lsi01G018770 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G018770
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Nuclear transcription factor Y subunit A-1-like protein
Location	chr01 : 21286555 .. 21292975 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACACGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAGTGTGCCAGGGCCCAAAACAAACACCAAGGAATTGCAAATAACTCTGTCTCCACCTCGAGGTAATTAAGGTTTAAATATAGAAACACCAGTGAATATAGCAATGAGGTCCAAAATATTATTTGCATGAATAATACAATACAATTTTTTTTATAAATATATATAAAAATTTAAATCAAGTTCTCAAAATCTATTAGTGATAGATTTTATTGCTAATAAAAATCTATCAAACAATAGAGTCTATCACTAATAGGAGCCTATCATCATTAATAGTTTTGCTATATTTGTAATTTTTTACAAATATTGCTTATTATCCTTAAAAGTCATATCAATTGCAATTACCCTAAAACGGATATGACTTTTGGTTGATGATTTCATTAAGTATATTCTCCTTCTTAAGTTTTGTTCATAATATTTTACAAAATTCAACCGTTGATTATTTTTTTTTTGGAGATTTTTAAAAATAGAAAAACAAAGGAATCTATTTATACAAAATAGAAATTTTTTTAGATAGTTGTGATAGATGCTGATAGAAGTCTATTAGGGTTTATCAGTAATAGAAATTATAGAAGTCTATCACTGATAGATGCTGATAGAAGTCTATCAACGTCTATCAGTGTTTTTTTTACTATTTTCTGTAAATAGTTTGATATTTTTTCTATAGGTAAAAATTTCTTTTTTTTTTTTAATTTTTTTTTAATTTATATTTATTAATGATAATTGTTTTAAAGGATAAAATTATTAGAAATATTTTTTAATATAGTAAAATGTCATTGTCTATCATTGATGTATATGTAATAAATTGATTCATTTTGGTATATTTAAAAACAAACCTGCACAAATTTAGAGTGTAATTTCATGATCGTGCATAAATTTATAATTTTCTTCTCCAATGTGTTGTTGGGTTTGGTAAGAAAAAACAAGTTTATTCTATTAAAAAATTGTGAAGTTCAGGGAAAAGTATTACGTGGCTCATCGACATTTCCAATATTACCCGACAAATTTTATTTTCTTAGTGACCTTATTTTTTTGGTTTTTTTTTTTTTTGGTTTGATATATCCTACTTTGACGTGTTCAATCATACACACTAATATAAAAAAGATTAAAATACTTTATTGGTGTCACTTTGAAACTTATTTTACTTCATGTCGAAATTTAGTTAATATATTTTTAATAAATCTTGAAATTTGTTCTAATGTCAGTTTAACATTGGAAAACTTGTAGCTGTTCGTCCACAAATTTTGAAAACATATTTGTATTGTGTCCTTTTTTAATAACAATGAAATATCATTATTTTTTCTAGTTCGATAAAAAAAATATATTTAAACTAATAGTAAGGACTAATTTTAAGAATTAATGAAAAATATGAGACTAAATTTAAACGTTTAAAAGCACATGTCTAAAATAAAATGAGTCTTAAACTATGAAAACAAAAATGATATTTTGACCATAAAAATTTATGTATAATTGTCACAAAATAGTATGTCTTGTTTACTTATTTTTAGGAAAAAAAACCTTTTTGATTCCAGGTTTTGAATCTAGTTTATATTTGGTCTCTAAATTTCAAAATATTACATTTTTAGTCTTTAAATTTTGAGTTTGGTTTCAATTTAGTCGCTAAAGAGAAAAACACGTTGATTTTGATTAGAGCATGTTTTTTAGGGAACCAAGGTGGACAAATTGATAGTTCTTTTTAGGGATGTTTTGCATAAGTGTGTTACCTTGTTTGAGGCAAAGATTGTTGAAAGTGTGACCAAAATTCTATATATTCAAGTGAACAATAACGAAGAATTACAAAATTTTAGAAAGGTCCATTCTCCCTAACCATTGATGTTTTTAAAACAAAACTTTTCACAAGTTAAATCACAAAATTCAAATATTGAGATTTAAAAAATAAACCCACCTAAATAGAAAGTCATTGTACTTGATTTAGTAAATTTGAAAACAAGAAATTGTACTTGATCATAAGACAACAAAACATACTCTTAAATGTGTAAATGGTGTTAATGTTGTGTTGATGATGGTAGATAGAATGCTTTAAAGTATTGAATTCAAAGGTAATGCTAAAATACTAAAGACAACACATTACATTTTTGAAGTGTTGTATAATGTTATTAAGAATGATAAGTTTTCGACATGAGCAGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGGTTCTCTCTCTCTCGTTCTCTCTCACTCTTTCTCTCTCTTCCCTTCTTCATATTGAAACTGATAATTTCTATTTTTAATAGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGGTATGAATACGATATTAAAGGCTTGTTTGATAATATTTTTGTTTTTTTGTGTATGATTCCTATTTTTAATTTTCTAATGAAAGAAAATGGTGAAACACATGGTTTAATAACATTAGGCTTAAAGATTAAGATCTTGTTTGATAACAATTTTGTGTTTGGTTTCTAGATTTTGAAAATTAAGGTTTGAGTTGATAATTATTTGGTTTTTGATATTTTAAAACTAAGTTTATAAATACTACTTTCAACTATTGATTTCTTTGTTTCACTATATACCTTTTCAAATATGTTTTCAAAAACCAAATTAAGTTTTGAAAACTAACCCTCTGTTTGGTAACCTCTACATTTTTTTGCTTTGCTATCTACATTTTACCAATGTTTTTAAAAAACCAAGTCAAGTTTTGAAAACTAAAAAAATTAGTTTTTAAAAACTTGTTTATGTTTTTTAAATTTGACTAAAAATTGAACTATTTTACTTAAGAAAATGGTAAAACACTATAAGAAGTTGAGAGGAAATAAACTTAATTTTCAAAAATAAAAAACTATTTGGTAAATAAAGTAGTTTGTTTAAAAAGGTAGTTTTTTGTATTTTAAATTTGGTTAAAAATTAAAAGATCAAAATATGAAAACTATGGTAAATAAATAGTAAGAAAATAAACACCATTTAAAAAATAAATAAAATAAACTAAATGGTTATGAAAGGGANCGTTTAAAAGCACATGTCTAAAATAAAATGAGTCTTAAACTATGAAAACAAAAATGATATTTTGACCATAAAAATTTATGTATAATTGTCACAAAATAGTATGTCTTGTTTACTTATTTTTAGGAAAAAAAACCTTTTTGATTCCAGGTTTTGAATCTAGTTTATATTTGGTCTCTAAATTTCAAAATATTACATTTTTAGTCTTTAAATTTTGAGTTTGGTTTCAATTTAGTCGCTAAAGAGAAAAACACGTTGATTTTGATTAGAGCATGTTTTTTAGGGAACCAAGGTGGACAAATTGATAGTTCTTTTTAGGGATGTTTTGCATAAGTGTGTTACCTTGTTTGAGGCAAAGATTGTTGAAAGTGTGACCAAAATTCTATATATTCAAGTGAACAATAACGAAGAATTACAAAATTTTAGAAAGGTCCATTCTCCCTAACCATTGATGTTTTTAAAACAAAACTTTTCACAAGTTAAATCACAAAATTCAAATATTGAGATTTAAAAAATAAACCCACCTAAATAGAAAGTCATTGTACTTGATTTAGTAAATTTGAAAACAAGAAATTGTACTTGATCATAAGACAACAAAACATACTCTTAAATGTGTAAATGGTGTTAATGTTGTGTTGATGATGGTAGATAGAATGCTTTAAAGTATTGAATTCAAAGGTAATGCTAAAATACTAAAGACAACACATTACATTTTTGAAGTGTTGTATAATGTTATTAAGAATGATAAGTTTTCGACATGAGCAGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGGTTCTCTCTCTCTCGTTCTCTCTCACTCTTTCTCTCTCTTCCCTTCTTCATATTGAAACTGATAATTTCTATTTTTAATAGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGGTATGAATACGATATTAAAGGCTTGTTTGATAATATTTTTGTTTTTTTGTGTATGATTCCTATTTTTAATTTTCTAATGAAAGAAAATGGTGAAACACATGGTTTAATAACATTAGGCTTAAAGATTAAGATCTTGTTTGATAACAATTTTGTGTTTGGTTTCTAGATTTTGAAAATTAAGGTTTGAGTTGATAATTATTTGGTTTTTGATATTTTAAAACTAAGTTTATAAATACTACTTTCAACTATTGATTTCTTTGTTTCACTATATACCTTTTCAAATATGTTTTCAAAAACCAAATTAAGTTTTGAAAACTAACCCTCTGTTTGGTAACCTCTACATTTTTTTGCTTTGCTATCTACATTTTACCAATGTTTTTAAAAAACCAAGTCAAGTTTTGAAAACTAAAAAAATTAGTTTTTAAAAACTTGTTTATGTTTTTTAAATTTGACTAAAAATTGAACTATTTTACTTAAGAAAATGGTAAAACACTATAAGAAGTTGAGAGGAAATAAACTTAATTTTCAAAAATAAAAAACTATTTGGTAAATAAAGTAGTTTGTTTAAAAAGGTAGTTTTTTGTATTTTAAATTTGGTTAAAAATTAAAAGATCAAAATATGAAAACTATGGTAAATAAATAGTAAGAAAATAAACACCATTTAAAAAATAAATAAAATAAACTAAATGGTTATGAAAGGGATGTGTAAGCTTGCTAAATACTGCTACTTCCATTATCTATGAATTTCTTTTTGTTCGGTTAATAATTGAGAAATGTTTTTTTAATATATATCCATTGCTAAATATTCCTTTTTTTTTTTTTTTTTTTAAGAAATTAGTTAAAAATTTAAATCTTTACCCGAAGAACATTGTAAAGAAATTATTAGAGAACAAAGGCAATTATCAAAATTCAAGCCATGAATAAACAAATGATTATCGATGTTTAAATTACTCACTCTACAATAATTAAGTCTTATTAATCAAAGTCCATATACTTAAATAAGTAAGGCTTCAACTTTGAGAGGCAATGGCTCATATGTAATATCCTATGTTGAGAAATTCATTCCTTTCATGCATATAAGCCACTTCGGAGTGTTTGTCTCAAGGAGATGAGTTTGAAGGAGCTCGTAACCCACAACTGAAAAATATAAAATTTATGTTTTATTAACTTCTTACATTATGGGCTCCACAACTTCACAACTTGCTCCAAAAACACATCCCATTTATTTTTTGAACTCCAAAAAAACAATTTTTCTTAGATGGATTTGATATTTTGATATTATTTTTTTTCATTTGTTTGTCTTTTTAATTTTTTGGTTTTATATGGCAATAAAAGAGGAAGTCAGAAGAAAACAACTCGATTATATACCTTTACTATGGTTTTAAAGAGCTCATTTGTTAATTACTCAGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGGTAACGAAACATAACCCACTATATATATATATATATATATATATAATGTATAAATCTCTAACTTATTAGCTTAAGCTTTCTTCGATAACCAACATCTGTACGTATCGCAGCCCTATCTTCACGAATCGAGACATCTACACGCAATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGATTGGGTTAGGTGCTTTGGCTTTGGGAACGACTTCTCCCTCCTTTTCTTCATCTATTTGGAAGATGAACACAAAAGTGTTAGGACCCAATCTATAATATATATATATTGTATATTTAATCTTTTTAGTTTAAGAGTTTTCTGGTTGAGTGATATATATATTATATTGTTGGTTTTTTCTTT

mRNA sequence

ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACACGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGCCCTATCTTCACGAATCGAGACATCTACACGCAATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGATTGGGTTAGGTGCTTTGGCTTTGGGAACGACTTCTCCCTCCTTTTCTTCATCTATTTGGAAGATGAACACAAAAGTGTTAGGACCCAATCTATAATATATATATATTGTATATTTAATCTTTTTAGTTTAAGAGTTTTCTGGTTGAGTGATATATATATTATATTGTTGGTTTTTTCTTT

Coding sequence (CDS)

ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACACGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGCCCTATCTTCACGAATCGAGACATCTACACGCAATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGA

Protein sequence

MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

Homology

[Close]

BLAST of Lsi01G018770 vs. Swiss-Prot
Match: NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-24
Identity = 82/182 (45.05%), Postives = 100/182 (54.95%), Query Frame = 1


Query: 84  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVT--LSMTPGTSYVYHDLSYGG 143
           + N+G+E   P  S         + N H        ELV   ++  P     Y D  YGG
Sbjct: 93  VDNHGMEGNDPALS---------IRNMHDQPLVQPPELVGHYIACVPNP---YQDPYYGG 152

Query: 144 LMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRI 203
           LM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++
Sbjct: 153 LMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKV 212

Query: 204 SRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCN 263
            R  RKPYLHESRH HAMRR R  GGRF    KK+E     D G   G +   GS +  +
Sbjct: 213 IRD-RKPYLHESRHKHAMRRARASGGRFA---KKSEVEAGEDAG---GRDRERGSATNSS 255

[Close]

BLAST of Lsi01G018770 vs. Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.7e-24
Identity = 76/184 (41.30%), Postives = 104/184 (56.52%), Query Frame = 1


Query: 86  NNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSEL----VTLSMTPGTSYVYHDLSYGG 145
           ++ + S    + RD+    P+ +  +Y +  +         T SM PG  Y Y D  Y  
Sbjct: 9   SDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPG-QYPYPDPYYRS 68

Query: 146 LMSP--LGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN 205
           + +P    +  +H     +  QG + LP    EEPV+VNAKQYHGILRRRQSRA+ E +N
Sbjct: 69  IFAPPPQPYTGVHLQLMGVQQQG-VPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQN 128

Query: 206 RISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESM 264
           ++ +S RKPYLHESRHLHA+RR RGCGGRF++ KK+ E     D    E  N+S G  +M
Sbjct: 129 KVIKS-RKPYLHESRHLHAIRRPRGCGGRFLNAKKEDE--HHEDSSHEEKSNLSAGKSAM 187

[Close]

BLAST of Lsi01G018770 vs. Swiss-Prot
Match: NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.5e-23
Identity = 69/140 (49.29%), Postives = 84/140 (60.00%), Query Frame = 1


Query: 108 NNEHYHASTSQS----ELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGR 167
           N E  H   +Q     +LV  ++   +S  Y D  Y G+M   G   +    Y  M   R
Sbjct: 97  NQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSR 156

Query: 168 MALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRER 227
           M LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR R
Sbjct: 157 MPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKS-RKPYLHESRHQHAMRRPR 216

Query: 228 GCGGRFVSK------KKKAE 238
           G GGRF  K      K+KAE
Sbjct: 217 GTGGRFAKKTNTEASKRKAE 235

[Close]

BLAST of Lsi01G018770 vs. Swiss-Prot
Match: NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 6.7e-20
Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 1


Query: 131 SYVYHDLSYGGLMSP--LGFQTMHNSEYSIMAQGRMALPLAMAE-EPVYVNAKQYHGILR 190
           S+ Y D  YGGL++   L      N +   M  GR+ LP  + E +PV+VNAKQYH I+R
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMR 193

Query: 191 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK 235
           RRQ RAK E +N++ R+ RKPYLHESRH+HA++R RG GGRF++ KK
Sbjct: 194 RRQQRAKLEAQNKLIRA-RKPYLHESRHVHALKRPRGSGGRFLNTKK 239

[Close]

BLAST of Lsi01G018770 vs. Swiss-Prot
Match: NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 159 MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHA 218
           M Q  + L     EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ +KPY+HESRHLHA
Sbjct: 84  MQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKA-KKPYMHESRHLHA 143

Query: 219 MRRERGCGGRFVSKKK-----KAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCS 271
           +RR RGCGGRF++ KK     K E   + D+   E  + SL SE +   +S   G S
Sbjct: 144 IRRPRGCGGRFLNAKKENGDHKEEEEATSDENTSEASS-SLRSEKLAMATSGPNGRS 198

[Close]

BLAST of Lsi01G018770 vs. TrEMBL
Match: A0A0A0KWA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G159320 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 9.2e-101
Identity = 202/278 (72.66%), Postives = 220/278 (79.14%), Query Frame = 1


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K L
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSE 120
           V +        +P    +     I+ +GV  TLP+KSRD S VLP MNNEHYHASTSQSE
Sbjct: 141 VDS--------QPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSE 200

Query: 121 LVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAK 180
           L++LSMT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAK
Sbjct: 201 LLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAK 260

Query: 181 QYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATT 240
           QYHGILRRRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAEA++
Sbjct: 261 QYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASS 320

Query: 241 SMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 279
            +DD DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Sbjct: 321 LLDDDDGEGSNISLGSESMCNGSKCYQG-SQLHLSAYI 344

[Close]

BLAST of Lsi01G018770 vs. TrEMBL
Match: A0A0D2PDJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G172100 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-29
Identity = 86/162 (53.09%), Postives = 105/162 (64.81%), Query Frame = 1


Query: 105 PLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRM 164
           PL   EH H   SQ ELV  S+   TSY Y D  YGG+++  G Q M +     M   RM
Sbjct: 90  PLTLGEH-HEPNSQMELVGHSIVL-TSYPYSDPQYGGMLTSYGPQMMVSPHLYGMHHARM 149

Query: 165 ALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERG 224
            LPL M EEPVYVNAKQYHGILRRRQ RAKAE+E +  +  RKPYLHESRHLHAMRR RG
Sbjct: 150 PLPLQMEEEPVYVNAKQYHGILRRRQIRAKAELEKKAIKI-RKPYLHESRHLHAMRRARG 209

Query: 225 CGGRFVSKKKKAEATTSMDDGDGEGCNISLGSE-SMCNGSSC 266
           CGGRF++ KK+ +  TS     G   + ++ ++ S+ +GS C
Sbjct: 210 CGGRFLNTKKQGDDVTSPTSQKGMNSDENISTKSSILSGSEC 248

[Close]

BLAST of Lsi01G018770 vs. TrEMBL
Match: A0A0B0PEQ5_GOSAR (Nuclear transcription factor Y subunit A-1-like protein OS=Gossypium arboreum GN=F383_01510 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 86/174 (49.43%), Postives = 110/174 (63.22%), Query Frame = 1


Query: 105 PLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRM 164
           PL   EH H   SQ ELV  S+   TSY Y D  YGG+++  G Q M +     M   RM
Sbjct: 90  PLTLGEH-HEPNSQMELVGHSIVL-TSYPYSDPQYGGMLTSYGPQMMVSPHLYGMHHARM 149

Query: 165 ALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERG 224
            LPL M EEPVYVNAKQYHGILRRRQ RAKAE+E +  +  RKPYLHESRHLHAMRR RG
Sbjct: 150 PLPLQMEEEPVYVNAKQYHGILRRRQIRAKAELEKKAIK-VRKPYLHESRHLHAMRRARG 209

Query: 225 CGGRFVSKKKKAEATTSMDDGDGEGCNISLGSE-SMCNGSSCYQGCSQLHLSAY 278
           CGGRF++ KK+ +  TS     G   + ++ ++ S+ +GS C       +++++
Sbjct: 210 CGGRFLNTKKQGDDVTSPTSQKGMNSDENISTKSSILSGSECVSATGAGNMNSF 260

[Close]

BLAST of Lsi01G018770 vs. TrEMBL
Match: A0A061DWD2_THECC (Nuclear transcription factor Y subunit A-1, putative isoform 1 OS=Theobroma cacao GN=TCM_005875 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-28
Identity = 90/181 (49.72%), Postives = 112/181 (61.88%), Query Frame = 1


Query: 87  NGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPL 146
           NG +   P  +  A+   PL   EH   + SQ ELV  S+   T+Y Y D  Y G+M+  
Sbjct: 75  NGQDRQHPKHAPSAA---PLTLGEHLEPN-SQMELVGHSIVL-TAYPYSDPQYSGIMTSY 134

Query: 147 GFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR 206
           G QTM +     M   RM LPL M EEPVYVNAKQYHGILRRRQ RAKAE+E +  ++ R
Sbjct: 135 GPQTMVSPHLYGMHHARMPLPLQMEEEPVYVNAKQYHGILRRRQIRAKAELEKKAFKA-R 194

Query: 207 KPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTS--MDDGDGEGCNISLGSESMCNGSS 266
           KPYLHESRHLHAMRR RGCGGRF++ KK+    TS   ++      N+S+ S  + +GS 
Sbjct: 195 KPYLHESRHLHAMRRARGCGGRFLNTKKQDNDVTSPTSEECMNSDANLSIKSAHL-SGSG 248

[Close]

BLAST of Lsi01G018770 vs. TrEMBL
Match: A0A061E368_THECC (Nuclear transcription factor Y subunit A-1, putative isoform 2 OS=Theobroma cacao GN=TCM_005875 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-28
Identity = 90/181 (49.72%), Postives = 112/181 (61.88%), Query Frame = 1


Query: 87  NGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPL 146
           NG +   P  +  A+   PL   EH   + SQ ELV  S+   T+Y Y D  Y G+M+  
Sbjct: 75  NGQDRQHPKHAPSAA---PLTLGEHLEPN-SQMELVGHSIVL-TAYPYSDPQYSGIMTSY 134

Query: 147 GFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR 206
           G QTM +     M   RM LPL M EEPVYVNAKQYHGILRRRQ RAKAE+E +  ++ R
Sbjct: 135 GPQTMVSPHLYGMHHARMPLPLQMEEEPVYVNAKQYHGILRRRQIRAKAELEKKAFKA-R 194

Query: 207 KPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTS--MDDGDGEGCNISLGSESMCNGSS 266
           KPYLHESRHLHAMRR RGCGGRF++ KK+    TS   ++      N+S+ S  + +GS 
Sbjct: 195 KPYLHESRHLHAMRRARGCGGRFLNTKKQDNDVTSPTSEECMNSDANLSIKSAHL-SGSG 248

[Close]

BLAST of Lsi01G018770 vs. TAIR10
Match: AT5G12840.1 (AT5G12840.1 nuclear factor Y, subunit A1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 82/182 (45.05%), Postives = 100/182 (54.95%), Query Frame = 1


Query: 84  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVT--LSMTPGTSYVYHDLSYGG 143
           + N+G+E   P  S         + N H        ELV   ++  P     Y D  YGG
Sbjct: 93  VDNHGMEGNDPALS---------IRNMHDQPLVQPPELVGHYIACVPNP---YQDPYYGG 152

Query: 144 LMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRI 203
           LM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++
Sbjct: 153 LMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKV 212

Query: 204 SRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCN 263
            R  RKPYLHESRH HAMRR R  GGRF    KK+E     D G   G +   GS +  +
Sbjct: 213 IRD-RKPYLHESRHKHAMRRARASGGRFA---KKSEVEAGEDAG---GRDRERGSATNSS 255

[Close]

BLAST of Lsi01G018770 vs. TAIR10
Match: AT1G30500.2 (AT1G30500.2 nuclear factor Y, subunit A7)

HSP 1 Score: 112.5 bits (280), Expect = 4.3e-25
Identity = 76/184 (41.30%), Postives = 104/184 (56.52%), Query Frame = 1


Query: 86  NNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSEL----VTLSMTPGTSYVYHDLSYGG 145
           ++ + S    + RD+    P+ +  +Y +  +         T SM PG  Y Y D  Y  
Sbjct: 9   SDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPG-QYPYPDPYYRS 68

Query: 146 LMSP--LGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN 205
           + +P    +  +H     +  QG + LP    EEPV+VNAKQYHGILRRRQSRA+ E +N
Sbjct: 69  IFAPPPQPYTGVHLQLMGVQQQG-VPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQN 128

Query: 206 RISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESM 264
           ++ +S RKPYLHESRHLHA+RR RGCGGRF++ KK+ E     D    E  N+S G  +M
Sbjct: 129 KVIKS-RKPYLHESRHLHAIRRPRGCGGRFLNAKKEDE--HHEDSSHEEKSNLSAGKSAM 187

[Close]

BLAST of Lsi01G018770 vs. TAIR10
Match: AT3G20910.1 (AT3G20910.1 nuclear factor Y, subunit A9)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-24
Identity = 69/140 (49.29%), Postives = 84/140 (60.00%), Query Frame = 1


Query: 108 NNEHYHASTSQS----ELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGR 167
           N E  H   +Q     +LV  ++   +S  Y D  Y G+M   G   +    Y  M   R
Sbjct: 97  NQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSR 156

Query: 168 MALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRER 227
           M LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR R
Sbjct: 157 MPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKS-RKPYLHESRHQHAMRRPR 216

Query: 228 GCGGRFVSK------KKKAE 238
           G GGRF  K      K+KAE
Sbjct: 217 GTGGRFAKKTNTEASKRKAE 235

[Close]

BLAST of Lsi01G018770 vs. TAIR10
Match: AT1G72830.2 (AT1G72830.2 nuclear factor Y, subunit A3)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 1


Query: 131 SYVYHDLSYGGLMSP--LGFQTMHNSEYSIMAQGRMALPLAMAE-EPVYVNAKQYHGILR 190
           S+ Y D  YGGL++   L      N +   M  GR+ LP  + E +PV+VNAKQYH I+R
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMR 193

Query: 191 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK 235
           RRQ RAK E +N++ R+++ PYLHESRH+HA++R RG GGRF++ KK
Sbjct: 194 RRQQRAKLEAQNKLIRARKVPYLHESRHVHALKRPRGSGGRFLNTKK 240

[Close]

BLAST of Lsi01G018770 vs. TAIR10
Match: AT2G34720.1 (AT2G34720.1 nuclear factor Y, subunit A4)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 159 MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHA 218
           M Q  + L     EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ +KPY+HESRHLHA
Sbjct: 84  MQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKA-KKPYMHESRHLHA 143

Query: 219 MRRERGCGGRFVSKKK-----KAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCS 271
           +RR RGCGGRF++ KK     K E   + D+   E  + SL SE +   +S   G S
Sbjct: 144 IRRPRGCGGRFLNAKKENGDHKEEEEATSDENTSEASS-SLRSEKLAMATSGPNGRS 198

[Close]

BLAST of Lsi01G018770 vs. NCBI nr
Match: gi|659121698|ref|XP_008460780.1| (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 2.0e-101
Identity = 209/279 (74.91%), Postives = 224/279 (80.29%), Query Frame = 1


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+  NRPDCD QQ TNYT  NSQ  +    +HGG +T A MSKEEK N AW K L
Sbjct: 1   MMSSEIECGNRPDCDNQQITNYTN-NSQPCK----LHGGNSTTANMSKEEKRNWAWPKGL 60

Query: 61  VGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSE 120
           V +         PV   +     I+ +GVESTLP+KSRD S VLPLMNNEHYHASTSQ E
Sbjct: 61  VDS--------EPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPE 120

Query: 121 LVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAK 180
           L+TLSMT  TSY YHD SYGGL SP  FQTMHNS+YS MAQ RMALPLAMAEEPVYVNAK
Sbjct: 121 LLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAK 180

Query: 181 QYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATT 240
           QYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRF+SKKKK EA+T
Sbjct: 181 QYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEAST 240

Query: 241 SM-DDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 279
           S+ DD DGEG NISLGSESMCNGS+CYQG SQLHLSAYI
Sbjct: 241 SLDDDDDGEGSNISLGSESMCNGSNCYQG-SQLHLSAYI 265

[Close]

BLAST of Lsi01G018770 vs. NCBI nr
Match: gi|449465501|ref|XP_004150466.1| (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 1.3e-100
Identity = 202/278 (72.66%), Postives = 220/278 (79.14%), Query Frame = 1


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K L
Sbjct: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 60

Query: 61  VGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSE 120
           V +        +P    +     I+ +GV  TLP+KSRD S VLP MNNEHYHASTSQSE
Sbjct: 61  VDS--------QPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSE 120

Query: 121 LVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAK 180
           L++LSMT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAK
Sbjct: 121 LLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAK 180

Query: 181 QYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATT 240
           QYHGILRRRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAEA++
Sbjct: 181 QYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASS 240

Query: 241 SMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 279
            +DD DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Sbjct: 241 LLDDDDGEGSNISLGSESMCNGSKCYQG-SQLHLSAYI 264

[Close]

BLAST of Lsi01G018770 vs. NCBI nr
Match: gi|700198675|gb|KGN53833.1| (hypothetical protein Csa_4G159320 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 1.3e-100
Identity = 202/278 (72.66%), Postives = 220/278 (79.14%), Query Frame = 1


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K L
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSE 120
           V +        +P    +     I+ +GV  TLP+KSRD S VLP MNNEHYHASTSQSE
Sbjct: 141 VDS--------QPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSE 200

Query: 121 LVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAK 180
           L++LSMT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAK
Sbjct: 201 LLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAK 260

Query: 181 QYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATT 240
           QYHGILRRRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAEA++
Sbjct: 261 QYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASS 320

Query: 241 SMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 279
            +DD DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Sbjct: 321 LLDDDDGEGSNISLGSESMCNGSKCYQG-SQLHLSAYI 344

[Close]

BLAST of Lsi01G018770 vs. NCBI nr
Match: gi|694327809|ref|XP_009354754.1| (PREDICTED: nuclear transcription factor Y subunit A-1-like [Pyrus x bretschneideri])

HSP 1 Score: 144.8 bits (364), Expect = 2.2e-31
Identity = 104/249 (41.77%), Postives = 139/249 (55.82%), Query Frame = 1


Query: 27  SQSWRWHGGVHGGATTIAVMSKEEKANRAW-----SKALVGNTGYIIRIPRPVVWRTDVS 86
           SQ W W GG +G A+++   S     N A      ++   G   +   +   V  + D  
Sbjct: 26  SQPW-WRGGGNGSASSLVDHSNSMVMNGAMQAQPNARLDGGGANFHKELRTTVGLQPD-- 85

Query: 87  TWISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGG 146
               NNG E+   H    +S V+P +  EH   + SQ ELV  S+   +SY Y D  YGG
Sbjct: 86  ---GNNGSENQ--HIKSVSSSVVPALG-EHVDPN-SQMELVGHSIVM-SSYPYSDPQYGG 145

Query: 147 LMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRI 206
           +++P G Q M    +  M  GRM LPL M EEPVYVNAKQYHGILRRRQSRAKAE+E ++
Sbjct: 146 ILTPYGPQAMLPPHFYGMHPGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKL 205

Query: 207 SRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCN 266
            ++ RKPYLHESRHLHA+RR RGCGGRF++ KK+     +     G   + +   +S  +
Sbjct: 206 IKA-RKPYLHESRHLHALRRARGCGGRFLNTKKQDANNENSSLEKGMNLDGNHSGQSAKS 262

Query: 267 GSSCYQGCS 271
           G  C+   S
Sbjct: 266 GFECFPNTS 262

[Close]

BLAST of Lsi01G018770 vs. NCBI nr
Match: gi|658055131|ref|XP_008363319.1| (PREDICTED: nuclear transcription factor Y subunit A-4-like [Malus domestica])

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-30
Identity = 103/239 (43.10%), Postives = 134/239 (56.07%), Query Frame = 1


Query: 27  SQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISN 86
           SQ W W G  +G A+++   S     N A       N     R      +RT V +    
Sbjct: 25  SQPW-WRGVGNGTASSMVDHSSSMVMNGAMQAQT--NARLDGRANFNKEFRTTVESQXDG 84

Query: 87  NGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPL 146
           N        KS  +S+V P M  +H   + SQ ELV  S+   +SY Y D  YGG+++P 
Sbjct: 85  NSGSENQHTKSVSSSVV-PAMG-QHVDPN-SQMELVGHSIVM-SSYPYADPQYGGMLTPY 144

Query: 147 GFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR 206
           G QTM    +  M  GRM LP  M EEPVYVNAKQYHGILRRRQSRAKAE+E ++ ++ R
Sbjct: 145 GPQTMLXPHFYGMHPGRMPLPPDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKA-R 204

Query: 207 KPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSC 266
           KPYLHESRHLHA+RR RGCGGRF++ KK+ +   +     G   + +  +ES  +G  C
Sbjct: 205 KPYLHESRHLHALRRARGCGGRFLNXKKQDDNDENSSLXKGMNXDGNHSAESAKSGFEC 255

The following BLAST results are available for this feature:

BLAST of Lsi01G018770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFYA1_ARATH	2.0e-24	45.05	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2...	[more]
NFYA7_ARATH	7.7e-24	41.30	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2...	[more]
NFYA9_ARATH	6.5e-23	49.29	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2...	[more]
NFYA3_ARATH	6.7e-20	52.34	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2...	[more]
NFYA4_ARATH	2.5e-19	52.14	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2...	[more]

BLAST of Lsi01G018770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWA0_CUCSA	9.2e-101	72.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G159320 PE=4 SV=1	[more]
A0A0D2PDJ8_GOSRA	1.1e-29	53.09	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G172100 PE=4 SV=1	[more]
A0A0B0PEQ5_GOSAR	1.4e-29	49.43	Nuclear transcription factor Y subunit A-1-like protein OS=Gossypium arboreum GN...	[more]
A0A061DWD2_THECC	1.6e-28	49.72	Nuclear transcription factor Y subunit A-1, putative isoform 1 OS=Theobroma caca...	[more]
A0A061E368_THECC	1.6e-28	49.72	Nuclear transcription factor Y subunit A-1, putative isoform 2 OS=Theobroma caca...	[more]

BLAST of Lsi01G018770 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12840.1	1.1e-25	45.05	nuclear factor Y, subunit A1	[more]
AT1G30500.2	4.3e-25	41.30	nuclear factor Y, subunit A7	[more]
AT3G20910.1	3.6e-24	49.29	nuclear factor Y, subunit A9	[more]
AT1G72830.2	1.7e-21	50.47	nuclear factor Y, subunit A3	[more]
AT2G34720.1	1.4e-20	52.14	nuclear factor Y, subunit A4	[more]

BLAST of Lsi01G018770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121698\|ref\|XP_008460780.1\|	2.0e-101	74.91	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]	[more]
gi\|449465501\|ref\|XP_004150466.1\|	1.3e-100	72.66	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis sativus]	[more]
gi\|700198675\|gb\|KGN53833.1\|	1.3e-100	72.66	hypothetical protein Csa_4G159320 [Cucumis sativus]	[more]
gi\|694327809\|ref\|XP_009354754.1\|	2.2e-31	41.77	PREDICTED: nuclear transcription factor Y subunit A-1-like [Pyrus x bretschneide...	[more]
gi\|658055131\|ref\|XP_008363319.1\|	1.9e-30	43.10	PREDICTED: nuclear transcription factor Y subunit A-4-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016602	CCAAT-binding factor complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR018362	CCAAT-binding_factor_CS
IPR001289	NFYA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G018770.1	Lsi01G018770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 206..229 score: 4.8E-24coord: 174..196 score: 4.8
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 81..252 score: 4.0
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 173..229 score: 3.7
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 170..232 score: 4.6
IPR001289	Nuclear transcription factor Y subunit A	PROFILE	PS51152	NFYA_HAP2_2	coord: 171..232 score: 37
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 176..196 scor
None	No IPR available	unknown	Coil	Coil	coord: 187..207 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G018770	Csa4G159320	Cucumber (Chinese Long) v2	culsiB260
Lsi01G018770	CSPI04G10460	Wild cucumber (PI 183967)	cpilsiB259
Lsi01G018770	Cucsa.374630	Cucumber (Gy14) v1	cgylsiB606
Lsi01G018770	CmaCh03G000770	Cucurbita maxima (Rimu)	cmalsiB598
Lsi01G018770	CmoCh03G000780	Cucurbita moschata (Rifu)	cmolsiB583
Lsi01G018770	Cla000827	Watermelon (97103) v1	lsiwmB150
Lsi01G018770	MELO3C023161	Melon (DHL92) v3.5.1	lsimeB152
Lsi01G018770	ClCG04G000250	Watermelon (Charleston Gray)	lsiwcgB135
Lsi01G018770	MELO3C023161.2	Melon (DHL92) v3.6.1	lsimedB166
Lsi01G018770	Cla97C04G068610	Watermelon (97103) v2	lsiwmbB133
Lsi01G018770	Cp4.1LG10g11710	Cucurbita pepo (Zucchini)	cpelsiB055
Lsi01G018770	Carg22465	Silver-seed gourd	carlsiB170
Lsi01G018770	CsaV3_4G011610	Cucumber (Chinese Long) v3	cuclsiB281

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G018770	Silver-seed gourd	carlsiB259
Lsi01G018770	Silver-seed gourd	carlsiB260
Lsi01G018770	Wax gourd	lsiwgoB185
Lsi01G018770	Cucurbita maxima (Rimu)	cmalsiB792
Lsi01G018770	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G018770	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G018770	Cucumber (Gy14) v2	cgyblsiB245