Csa4G159320 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G159320
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Nuclear transcription factor Y subunit A-1, putative; contains IPR001289 (CCAAT-binding transcription factor, subunit B)
Location	Chr4 : 8340821 .. 8346110 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGCAAGATTGATCCTTTTATCTTCTCTCTCTTGTATAAAGAAATCTCAATCTATGCTTTGTGTTTACCCATTTGCCACCTGTTACCTTTTTCTCCCCAAAGAAAATTTTCTTTCATTGGAAATCTAGAATTTTCTCCCATCCCAAACACTCATCATCTCTTCTCTCTCCTCTTAACTCTGAGTTCTCTCCTTCCATATAATTTATTTGAGAGGTTGTATTTGGTGAGTAGATATCTGTTGTGGGCTTTAGAAATTTCGTTTTCTTTCTTATAATCCCAAATTTTCTTGCACTCCAAACACTGTTTTGTGTTGGGAAATTATTTTCACTTTCTTTTGGGATTCTTGCATTTTCTCACACCCCAAACACTGATCTTCTCTTCTCTCTACTGTGAGTTTATTTTTTTCATTTCTTAAATCTTTTATTACTTTGATTTGTTTGTTTCCTTTCTTTTGATTCTTCTTAATTCGGTTGTACTTTGGTAGAAGTTATTTGCCTTTACAAAAGAAAAGCCGCTTGTAGATTGATATATATGTATGTGTGCATGCATGAAGTGATATGAATGTATGTCTAAATGGGAATTAAGCAACTAACTATGAATTTTGTCATATGGTATGTCCAATTTTATGATAGAACTTATGCTAAAAGAATAGAGGTTAATTAAATCATGTACATACCCATATTTCTAGAATTTCATATATATATATTTCCTAAATTTTGTCAGATATATAACTCACAATTACCTAAGTCATTCAAATATATGTTCTGTCTTTGTTATATATGATATAATGAGACTTGCTTTTGTTTGATAAATAAATTTTCGCATAACAATTAAAAATATCAAAAGTATATAAAAGCTGGTGAAAGTTAAAACTAAATGAAGATATTAATTATGTTACACACTATAAGTTAAAAAATCAAAACGAACAAAAAAGACAATAATTTGTTTGAATAGTCAATTGTTTTATTATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCACACAGAAATATTTAAAAGAATTATATTATTATTTTCCAATTTTTCATAATTAAATGGTTGGGATACTTTTCTTTCAATTTGTTTTCTCCTTTTCTATGTTACTAGAGAAAAAAAAATCTTTTGTTGGGGACAAAAGTTCCAACATTATCAGATTTCTTTTTAAATTGTCTTTTTAAAGACCATTCTAATTATCTCATTTTCTTTTAGTTAAATATGAACAATATGACTTTTTCCCCAACAACTTTCAAGTTCTCAATCCAATGTTATCATACTTAATAACATTTTAAAAAAGACAACGATTTCATTTTTTTTATACTTTTGTTTTTTATTTTAAGCTTATAGACAATTTTTTCTATTGTTATCTATACGGTTAAAAGGTAAACTAAAATTTGGAAGAAAAAAAAAAGTAACATCCAAACGCTTGTTTACAAAAAAAACCATATATTTTTGCAAGCCACTAACTTTAGTTTTATATACTGTGATTTCTTTAATCAGAGGTCACCCTTTTGATACCTAAAAGTTTGAAAAAAATCTACGCAAATGTCCCTTTTAACATGTAGTTCATACACTAAATTGAACAAGTTGAAAGAACAAGGATGGAGATAATTTAAAAAGTTGAAAGCAAATTTTCTATTCTTTTGTTTAGTTTTCCTCCATCAAGATGGATTTTTGGAGATTTTTCTTTTTGAGTACAATTCGAGAGTTTGGATGCAATGTGCCACGAAGCTTAATTTTTGTTAGTTTAAATTTTGATTTTGTTTTATGTCTTTTTACCTTTATTGTTCTTCAGAAAATAGTGCAAATGATGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGCGTCAATAGCACCACTGCCTTTATGCCGAAAGAAGAAAAAAGAAATTGGGCTTGGCCCAAGCCCTTGGTTGACAGTCAACCAGAGCACAAAACAAGCACTAAGGAATTGCATATAACTTTGTCCGGTAATTACAATAATTTAATTAAGTATGCATCACCATTCAAATGACAAAAAAAATTGAAAATATAGAAAAGCGTATAAGTGATAGACTCCTATCGACAAACATTTGGAACATTTCTAATAGTGATAGATTTCTGTCATTGATAAGCTTTGACAAACTTTTATGTATTTACAAGTTTTTTTAAATGTCGTTAAATACCTAATTATTTTGAAATTCAATTGTTATATTTGCAATTATTCATAACTTTGTCTCTATCTTCGAGATAATGTTTAAATATAGGTATAAAATTACGTTTTTGTTACTCAAGTTTTAGTTTATGTTTTTTTAACCTATCTTAAATTTAATATAAGTTTTTTTACTAAATATAATTTCATTTTTAAGTCAATTTAATTTTCTTTATTAAATATAATAGGGATATTTTTAAAAATAACAAAATAAATTAAAATATTTACAAGTTATAGTAAATTTTTAGATTCTATCACTAATAGTCTTCTCTCAATCTAACCTATCAATAACTATCAATGATATAATTTGCTATTAGTGGTAAATCTTTTGTAAAATTTGTTATTTTTTAAAATTTCTACATTCACTTTTTAAGTCGGGAGGGAATGTACATTAGTCAATTTAAAATAATTATAAAGTTAAATTATATATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTTTAATAGAATGAAGAAGAGTGAAACTTAATTAATTACAACTTCATAATTTTTTTTAAAAAAGTTAGATAGTATGTATCACCTTTTAAGAATAGACAGAAAGTTTGTATTTGATGAAAAGTTGAAGCAAAAGTACTATTGAAACTCGCTATCCAAATTGAGACAAAGAACCAGAGACAACATAACAATTTTTGAAATGAAATGCTGCATAATAATGTTATTAAGAATGATAAGTTTTGGATATGATCAGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAGAGCTTCTTTCCCTTTCAATGGTTCTTTCTCTCTCTAGGTCTCTATTTTTTCTCTCTCTCTCCTTCATATTGAAACTGATCATTTCTATTTTTTAACAGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGGTATGTGGACAAGTTATTTCAAAAAGTCTCATTCCATAATGTTCTCGTTTTTTATTAACGTATGTTTTCTAATTTTTAATTTTTTAATGTAAGAAAACAGTGAAACATGCATGTTTAGTATCCTTCAGCCTTAAGAATAAGAGCTTATTTATTAACTATTTGGTAGTTTTTAGATTTTAATTTTGGAAATTTAAGGTTTTAGTTTCATAATCATTTGGTTAACCATAACCCTACTTTCCTACTTTCAAACTATTAATTTATTTATTTTGTTGTACATATATACACACACATATGCTGTCAAAATTGTATTCAAATAACCAAGTTTTGAAAACACACATCCCATTTGGTAGCCACATGAGTTTTTATTTTAGTTTTTAAAAAACAATTAAGTATTAAATATCATTTCCATTCTTCTTCTTCTTCTTTTTTTTTTTGCTGCCTACGGATCTTTTCAAACACCAAATTAAATTATGAAAACTAAAACTACTAGTCTTACAAAAATTTGTCTTAAAAATTCAACTCTTTTACTTATACTTAACAATCAGCTAAAGTGACTTAATTTTAAAAAAGAAAAAAAAAATTGTAATCAAATGTAGTTAAATAAACTACTTTTATAAAAAATAACAAATTTGATAAAATATTTACAACATATAGTAAAATTTTAGATCCTATCAATAATAGACACCAATAGAAGTTTATCACTTACTATATTCATAGAATCTAAAATTTTCTATAGTTTGTAAATATTTTAATTTATTTTGCTATTTTTTAAAAATACTTCTAATAATATTATTGTTATTTTATTTTAAAAGAATAGTTAATAATTGGTAACAAAATAAACACCATCTTTTGGAAAAAAAAAAGGTTATAAAATAGAGTTGTATCTTTTTAAACGATTAATACTACGACAAGTGGATGGTACTTAAATAGACCATTTGAAATAAGTTATATTGTTAGAGAACAAAGACGTACAATTTTTAAAATTCAAACCATACAAGTAAACCAATGACGAACGTATTTGAATTAACGACTATAATAATTAAGTGTACTATTAAATAATTAAGTGTACTATTAATAATAGTTCATATACTGCATCCATTTTTGGGGTACCATGTCTCGCATTTAATTTCCTATATCGAAAAATTTGTTTCTATAAAAACCACTTTCGAGTTTGTTAGGCTCAAGGAGTTGAGCTGAAGGAGTGACATGTTCTCCTTGTTTTGTTTAAGCCCTACATGAAAAGAAAAACATTTTTTTTCAACTTTGTATAATTGGAGTCTCATAGCTTTATTCCTACATAAAGCCGTCCACAATTTAACTAAAAAGGTTGATTTTTACTTAGGATTGTATAGAGTTAAGTTTTAGCTAAAAATAATGTTGATTGTTACTCAGCATAATTCAGACTATAGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAAAATATCCAGATCACAAAGAAAGGTAGACAAACGTAACCAACTATCTATATACAACATAAACATAAATCTCTAACTTTTTAGTTTAAGCTTTTTTCTTCGATAACCAACATGTGTGTGGATCGCAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGAAGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTACATTTATCTGCATATATATGAACGGTTAGGTGTTCCGGCTTTGAAAATAACTTGTCCTTCCGTTCCTTCAGCTACATGGAAAGATAAACACTAAATTAGGA

mRNA sequence

ATGGGGAGCAAGATTGATCCTTTTATCTTCTCTCTCTTGTATAAAGAAATCTCAATCTATGCTTTGTGTTTACCCATTTGCCACCTGTTACCTTTTTCTCCCCAAAGAAAATTTTCTTTCATTGGAAATCTAGAATTTTCTCCCATCCCAAACACTCATCATCTCTTCTCTCTCCTCTTAACTCTGAGTTCTCTCCTTCCATATAATTTATTTGAGAGGTTGTATTTGAAAATAGTGCAAATGATGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGCGTCAATAGCACCACTGCCTTTATGCCGAAAGAAGAAAAAAGAAATTGGGCTTGGCCCAAGCCCTTGGTTGACAGTCAACCAGAGCACAAAACAAGCACTAAGGAATTGCATATAACTTTGTCCGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAGAGCTTCTTTCCCTTTCAATGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGCATAATTCAGACTATAGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAAAATATCCAGATCACAAAGAAAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGAAGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTACATTTATCTGCATATATATGA

Coding sequence (CDS)

ATGGGGAGCAAGATTGATCCTTTTATCTTCTCTCTCTTGTATAAAGAAATCTCAATCTATGCTTTGTGTTTACCCATTTGCCACCTGTTACCTTTTTCTCCCCAAAGAAAATTTTCTTTCATTGGAAATCTAGAATTTTCTCCCATCCCAAACACTCATCATCTCTTCTCTCTCCTCTTAACTCTGAGTTCTCTCCTTCCATATAATTTATTTGAGAGGTTGTATTTGAAAATAGTGCAAATGATGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGCGTCAATAGCACCACTGCCTTTATGCCGAAAGAAGAAAAAAGAAATTGGGCTTGGCCCAAGCCCTTGGTTGACAGTCAACCAGAGCACAAAACAAGCACTAAGGAATTGCATATAACTTTGTCCGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAGAGCTTCTTTCCCTTTCAATGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGCATAATTCAGACTATAGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAAAATATCCAGATCACAAAGAAAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGAAGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTACATTTATCTGCATATATATGA

Protein sequence

MGSKIDPFIFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI*

Homology

[Close]

BLAST of Csa4G159320 vs. Swiss-Prot
Match: NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-27
Identity = 99/283 (34.98%), Postives = 128/283 (45.23%), Query Frame = 1


Query: 78  IVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWP 137
           I  M S      N  D +     + S N+  P          NS+     K  K      
Sbjct: 3   IEDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL 62

Query: 138 KPLVDSQPEHKTST--KELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQS---- 197
           +      P ++ +T  KE  +T S      P  + D S      N E  H   +Q     
Sbjct: 63  ESNGSKSPSNRDNTVNKESQVTTS------PQSAGDYSD----KNQESLHHGITQPPPHP 122

Query: 198 ELLSLSMTANTSYAYHDPSYGGLLS-----PFGFQTMHNSDYSRMALPLAMAEEPVYVNA 257
           +L+  ++   +S  Y DP Y G++      P GF       +SRM LP  MA+EPV+VNA
Sbjct: 123 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNA 182

Query: 258 KQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------N 317
           KQY  ILRRRQ+RAKAE+E K+ +S RKPYLHESRH HAMRR RG GGRF  K       
Sbjct: 183 KQYQAILRRRQARAKAELEKKLIKS-RKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASK 242

Query: 318 KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAY 344
           +KAE  S         S+ S   E+     +  QG ++  SAY
Sbjct: 243 RKAEEKSNGHVTQSPSSSNSDQGEAWNGDYRTPQGDEMQSSAY 274

[Close]

BLAST of Csa4G159320 vs. Swiss-Prot
Match: NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.4e-27
Identity = 70/131 (53.44%), Postives = 83/131 (63.36%), Query Frame = 1


Query: 206 YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 265
           Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 266 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 325
           KAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K  + EA      +D  G +  
Sbjct: 193 KAELERKVIR-DRKPYLHESRHKHAMRRARASGGRF-AKKSEVEAG-----EDAGGRDRE 252

Query: 326 LGSESMCNGSK 332
            GS +  +GS+
Sbjct: 253 RGSATNSSGSE 256

[Close]

BLAST of Csa4G159320 vs. Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.6e-26
Identity = 77/189 (40.74%), Postives = 99/189 (52.38%), Query Frame = 1


Query: 151 TKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLSLSMTANTSYAYH 210
           T  +H     +G     + RD     P  +  +Y +   S   S+  + +  A   Y Y 
Sbjct: 2   TSSIHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYP 61

Query: 211 DPSYGGLLSP--FGFQTMH----NSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAK 270
           DP Y  + +P    +  +H          + LP    EEPV+VNAKQYHGILRRRQSRA+
Sbjct: 62  DPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAR 121

Query: 271 AEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISL 330
            E +NK+ +S RKPYLHESRHLHA+RR RGCGGRFL+  K+ E     D    E SN+S 
Sbjct: 122 LESQNKVIKS-RKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHE--DSSHEEKSNLSA 181

[Close]

BLAST of Csa4G159320 vs. Swiss-Prot
Match: NFYA8_ARATH (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-23
Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = 1


Query: 191 SELLSLSMTANTSYAYHDPSYGGLLSPFGF---QTMHNSDYSRMALPLAMAE-EPVYVNA 250
           +++ S    AN S+ Y DP +GGL+ P  +    T+ N   +R+ LP  + E EPV+VNA
Sbjct: 120 ADIHSSPSKANFSFHYADPHFGGLM-PAAYLPQATIWNPQMTRVPLPFDLIENEPVFVNA 179

Query: 251 KQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEAS 310
           KQ+H I+RRRQ RAK E +NK+ ++ RKPYLHESRH+HA++R RG GGRFL+  K  E++
Sbjct: 180 KQFHAIMRRRQQRAKLEAQNKLIKA-RKPYLHESRHVHALKRPRGSGGRFLNTKKLQEST 239

Query: 311 SLLDD 312
               D
Sbjct: 240 DPKQD 242

[Close]

BLAST of Csa4G159320 vs. Swiss-Prot
Match: NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 8.0e-23
Identity = 63/137 (45.99%), Postives = 80/137 (58.39%), Query Frame = 1


Query: 178 FMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLS-------PFGFQTMHNSDYSR 237
           F +N    + T    +      AN S+ Y DP YGGLL+       P     M +    R
Sbjct: 109 FASNPKQGSMTGFPNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGR 168

Query: 238 MALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRE 297
           + LP  + E +PV+VNAKQYH I+RRRQ RAK E +NK+ R+ RKPYLHESRH+HA++R 
Sbjct: 169 VPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRA-RKPYLHESRHVHALKRP 228

Query: 298 RGCGGRFLSKNKKAEAS 307
           RG GGRFL+  K  + S
Sbjct: 229 RGSGGRFLNTKKLLQES 244

[Close]

BLAST of Csa4G159320 vs. TrEMBL
Match: A0A0A0KWA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G159320 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 1.5e-201
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1


Query: 1   MGSKIDPFIFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLL 60
           MGSKIDPFIFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLL
Sbjct: 1   MGSKIDPFIFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLL 60

Query: 61  TLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVN 120
           TLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVN
Sbjct: 61  TLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVN 120

Query: 121 STTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN 180
           STTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN
Sbjct: 121 STTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN 180

Query: 181 NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEE 240
           NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEE
Sbjct: 181 NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEE 240

Query: 241 PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN 300
           PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN
Sbjct: 241 PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN 300

Query: 301 KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 345
           KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
Sbjct: 301 KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of Csa4G159320 vs. TrEMBL
Match: A0A0D2PDJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G172100 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 86/169 (50.89%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 170 RDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTM-----H 229
           + V +  P    EH H   SQ EL+  S+   TSY Y DP YGG+L+ +G Q M     +
Sbjct: 83  KHVPSTTPLTLGEH-HEPNSQMELVGHSIVL-TSYPYSDPQYGGMLTSYGPQMMVSPHLY 142

Query: 230 NSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLH 289
              ++RM LPL M EEPVYVNAKQYHGILRRRQ RAKAE+E K  +  RKPYLHESRHLH
Sbjct: 143 GMHHARMPLPLQMEEEPVYVNAKQYHGILRRRQIRAKAELEKKAIKI-RKPYLHESRHLH 202

Query: 290 AMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSE-SMCNGSKC 333
           AMRR RGCGGRFL+  K+ +  +      G  S+ ++ ++ S+ +GS+C
Sbjct: 203 AMRRARGCGGRFLNTKKQGDDVTSPTSQKGMNSDENISTKSSILSGSEC 248

[Close]

BLAST of Csa4G159320 vs. TrEMBL
Match: A0A0B0PEQ5_GOSAR (Nuclear transcription factor Y subunit A-1-like protein OS=Gossypium arboreum GN=F383_01510 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 86/169 (50.89%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 170 RDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTM-----H 229
           + V +  P    EH H   SQ EL+  S+   TSY Y DP YGG+L+ +G Q M     +
Sbjct: 83  KHVPSTTPLTLGEH-HEPNSQMELVGHSIVL-TSYPYSDPQYGGMLTSYGPQMMVSPHLY 142

Query: 230 NSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLH 289
              ++RM LPL M EEPVYVNAKQYHGILRRRQ RAKAE+E K  +  RKPYLHESRHLH
Sbjct: 143 GMHHARMPLPLQMEEEPVYVNAKQYHGILRRRQIRAKAELEKKAIK-VRKPYLHESRHLH 202

Query: 290 AMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSE-SMCNGSKC 333
           AMRR RGCGGRFL+  K+ +  +      G  S+ ++ ++ S+ +GS+C
Sbjct: 203 AMRRARGCGGRFLNTKKQGDDVTSPTSQKGMNSDENISTKSSILSGSEC 248

[Close]

BLAST of Csa4G159320 vs. TrEMBL
Match: A0A0D2Q705_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G151800 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-32
Identity = 91/191 (47.64%), Postives = 117/191 (61.26%), Query Frame = 1


Query: 150 STKELHITL-----SGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSY 209
           S+KE+ +T+        G   PY    +  + P M    Y     Q EL+  S+ A  SY
Sbjct: 78  SSKEMPLTIFPHPDGKCGDEQPYLQHAIPIIRPTMGE--YVPPEPQLELVGHSI-ACPSY 137

Query: 210 AYHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSR 269
            Y DP YGG++ P+  Q++ +S       +RMALPL MAEEPVYVNAKQYHGILRRRQSR
Sbjct: 138 PYTDPYYGGVVPPYVPQSLVHSHSLGVHPARMALPLEMAEEPVYVNAKQYHGILRRRQSR 197

Query: 270 AKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNI 329
           AKAE+E K+ +  RKPYLHESRHLHAMRR RGCGGRFL+  K    +S    +    +++
Sbjct: 198 AKAELEKKLIK-VRKPYLHESRHLHAMRRARGCGGRFLNTKKLDSDASKATPNKSSDTSL 257

Query: 330 SLGSESMCNGS 331
           +L S+   N S
Sbjct: 258 NLPSQCPENTS 264

[Close]

BLAST of Csa4G159320 vs. TrEMBL
Match: A0A061EY16_THECC (Nuclear factor Y, putative OS=Theobroma cacao GN=TCM_024732 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.9e-32
Identity = 107/263 (40.68%), Postives = 144/263 (54.75%), Query Frame = 1


Query: 82  MSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKP-- 141
           M  ++E +NHP+ +      Y T  SQP     C    ++++  +  E + N A  K   
Sbjct: 1   MHQKLEGKNHPEPNANNNKPY-TVRSQPW---WCSTQQDASSTDVLGESRTNLAPGKHPN 60

Query: 142 ----LVDSQPEHKTSTKELHITLSGVGPT-LPY-------KSRDVSTVLPFM--NNEHYH 201
                  S+ +H   T +      G+  T LP+       +   +   +PFM      Y 
Sbjct: 61  GGLGTQTSESQHGELTDQKICASKGMWLTVLPHPDGKCGDEQPHLQHAVPFMPPTMGEYI 120

Query: 202 ASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEE 261
           A  ++ EL+  S+ A  SY Y DP YGG + P+G Q++ +        +RMALPL MAEE
Sbjct: 121 APRTRLELVGHSI-ACPSYPYADPYYGGAMPPYGPQSLVHPHCLGVHPARMALPLEMAEE 180

Query: 262 PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN 321
           PVYVNAKQYHGILRRRQSRAKAE+E K+ +  RKPYLHESRHLHAMRR RGCGGRFL+  
Sbjct: 181 PVYVNAKQYHGILRRRQSRAKAELEKKLIK-VRKPYLHESRHLHAMRRARGCGGRFLNTK 240

Query: 322 KKAEASSLLDDDDGEGSNISLGS 324
           K    +S    D G  ++ +L S
Sbjct: 241 KLDSDASNATPDKGSDTSSNLSS 257

[Close]

BLAST of Csa4G159320 vs. TAIR10
Match: AT3G20910.1 (AT3G20910.1 nuclear factor Y, subunit A9)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 99/283 (34.98%), Postives = 128/283 (45.23%), Query Frame = 1


Query: 78  IVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWP 137
           I  M S      N  D +     + S N+  P          NS+     K  K      
Sbjct: 3   IEDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL 62

Query: 138 KPLVDSQPEHKTST--KELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQS---- 197
           +      P ++ +T  KE  +T S      P  + D S      N E  H   +Q     
Sbjct: 63  ESNGSKSPSNRDNTVNKESQVTTS------PQSAGDYSD----KNQESLHHGITQPPPHP 122

Query: 198 ELLSLSMTANTSYAYHDPSYGGLLS-----PFGFQTMHNSDYSRMALPLAMAEEPVYVNA 257
           +L+  ++   +S  Y DP Y G++      P GF       +SRM LP  MA+EPV+VNA
Sbjct: 123 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNA 182

Query: 258 KQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------N 317
           KQY  ILRRRQ+RAKAE+E K+ +S RKPYLHESRH HAMRR RG GGRF  K       
Sbjct: 183 KQYQAILRRRQARAKAELEKKLIKS-RKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASK 242

Query: 318 KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAY 344
           +KAE  S         S+ S   E+     +  QG ++  SAY
Sbjct: 243 RKAEEKSNGHVTQSPSSSNSDQGEAWNGDYRTPQGDEMQSSAY 274

[Close]

BLAST of Csa4G159320 vs. TAIR10
Match: AT5G12840.1 (AT5G12840.1 nuclear factor Y, subunit A1)

HSP 1 Score: 123.2 bits (308), Expect = 3.0e-28
Identity = 70/131 (53.44%), Postives = 83/131 (63.36%), Query Frame = 1


Query: 206 YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 265
           Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 266 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 325
           KAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K  + EA      +D  G +  
Sbjct: 193 KAELERKVIR-DRKPYLHESRHKHAMRRARASGGRF-AKKSEVEAG-----EDAGGRDRE 252

Query: 326 LGSESMCNGSK 332
            GS +  +GS+
Sbjct: 253 RGSATNSSGSE 256

[Close]

BLAST of Csa4G159320 vs. TAIR10
Match: AT1G30500.2 (AT1G30500.2 nuclear factor Y, subunit A7)

HSP 1 Score: 121.7 bits (304), Expect = 8.8e-28
Identity = 77/189 (40.74%), Postives = 99/189 (52.38%), Query Frame = 1


Query: 151 TKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLSLSMTANTSYAYH 210
           T  +H     +G     + RD     P  +  +Y +   S   S+  + +  A   Y Y 
Sbjct: 2   TSSIHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYP 61

Query: 211 DPSYGGLLSP--FGFQTMH----NSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAK 270
           DP Y  + +P    +  +H          + LP    EEPV+VNAKQYHGILRRRQSRA+
Sbjct: 62  DPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAR 121

Query: 271 AEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISL 330
            E +NK+ +S RKPYLHESRHLHA+RR RGCGGRFL+  K+ E     D    E SN+S 
Sbjct: 122 LESQNKVIKS-RKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHE--DSSHEEKSNLSA 181

[Close]

BLAST of Csa4G159320 vs. TAIR10
Match: AT1G17590.1 (AT1G17590.1 nuclear factor Y, subunit A8)

HSP 1 Score: 111.7 bits (278), Expect = 9.1e-25
Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = 1


Query: 191 SELLSLSMTANTSYAYHDPSYGGLLSPFGF---QTMHNSDYSRMALPLAMAE-EPVYVNA 250
           +++ S    AN S+ Y DP +GGL+ P  +    T+ N   +R+ LP  + E EPV+VNA
Sbjct: 120 ADIHSSPSKANFSFHYADPHFGGLM-PAAYLPQATIWNPQMTRVPLPFDLIENEPVFVNA 179

Query: 251 KQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEAS 310
           KQ+H I+RRRQ RAK E +NK+ ++ RKPYLHESRH+HA++R RG GGRFL+  K  E++
Sbjct: 180 KQFHAIMRRRQQRAKLEAQNKLIKA-RKPYLHESRHVHALKRPRGSGGRFLNTKKLQEST 239

Query: 311 SLLDD 312
               D
Sbjct: 240 DPKQD 242

[Close]

BLAST of Csa4G159320 vs. TAIR10
Match: AT1G72830.2 (AT1G72830.2 nuclear factor Y, subunit A3)

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-24
Identity = 61/137 (44.53%), Postives = 80/137 (58.39%), Query Frame = 1


Query: 178 FMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLS-------PFGFQTMHNSDYSR 237
           F +N    + T    +      AN S+ Y DP YGGLL+       P     M +    R
Sbjct: 109 FASNPKQGSMTGFPNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGR 168

Query: 238 MALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRE 297
           + LP  + E +PV+VNAKQYH I+RRRQ RAK E +NK+ R+++ PYLHESRH+HA++R 
Sbjct: 169 VPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKVPYLHESRHVHALKRP 228

Query: 298 RGCGGRFLSKNKKAEAS 307
           RG GGRFL+  K  + S
Sbjct: 229 RGSGGRFLNTKKLLQES 245

[Close]

BLAST of Csa4G159320 vs. NCBI nr
Match: gi|700198675|gb|KGN53833.1| (hypothetical protein Csa_4G159320 [Cucumis sativus])

HSP 1 Score: 709.9 bits (1831), Expect = 2.1e-201
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1


Query: 1   MGSKIDPFIFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLL 60
           MGSKIDPFIFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLL
Sbjct: 1   MGSKIDPFIFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLL 60

Query: 61  TLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVN 120
           TLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVN
Sbjct: 61  TLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVN 120

Query: 121 STTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN 180
           STTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN
Sbjct: 121 STTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN 180

Query: 181 NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEE 240
           NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEE
Sbjct: 181 NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEE 240

Query: 241 PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN 300
           PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN
Sbjct: 241 PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN 300

Query: 301 KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 345
           KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
Sbjct: 301 KKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of Csa4G159320 vs. NCBI nr
Match: gi|449465501|ref|XP_004150466.1| (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 4.9e-153
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1


Query: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140
           MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL
Sbjct: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 60

Query: 141 VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 200
           VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA
Sbjct: 61  VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 120

Query: 201 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 260
           NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA
Sbjct: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 180

Query: 261 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 320
           KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS
Sbjct: 181 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 240

Query: 321 LGSESMCNGSKCYQGSQLHLSAYI 345
           LGSESMCNGSKCYQGSQLHLSAYI
Sbjct: 241 LGSESMCNGSKCYQGSQLHLSAYI 264

[Close]

BLAST of Csa4G159320 vs. NCBI nr
Match: gi|659121698|ref|XP_008460780.1| (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 4.4e-122
Identity = 229/270 (84.81%), Postives = 236/270 (87.41%), Query Frame = 1


Query: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140
           MMSSEIEC N PDCDNQQITNY TNNSQPC+LHG     NSTTA M KEEKRNWAWPK L
Sbjct: 1   MMSSEIECGNRPDCDNQQITNY-TNNSQPCKLHGG----NSTTANMSKEEKRNWAWPKGL 60

Query: 141 VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 200
           VDS+P  +TS KE+ ITLSGV  TLPYKSRD STVLP MNNEHYHASTSQ ELL+LSMT 
Sbjct: 61  VDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTT 120

Query: 201 NTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRR 260
           +TSY YHDPSYGGL SPF FQTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRR
Sbjct: 121 DTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRR 180

Query: 261 RQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEAS-SLLDDDDG 320
           RQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDG
Sbjct: 181 RQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDG 240

Query: 321 EGSNISLGSESMCNGSKCYQGSQLHLSAYI 345
           EGSNISLGSESMCNGS CYQGSQLHLSAYI
Sbjct: 241 EGSNISLGSESMCNGSNCYQGSQLHLSAYI 265

[Close]

BLAST of Csa4G159320 vs. NCBI nr
Match: gi|645250566|ref|XP_008231270.1| (PREDICTED: nuclear transcription factor Y subunit A-1-like [Prunus mume])

HSP 1 Score: 152.9 bits (385), Expect = 1.0e-33
Identity = 86/163 (52.76%), Postives = 105/163 (64.42%), Query Frame = 1


Query: 173 STVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTM-----HNSD 232
           S+V+P M    +H   SQ EL+       TSY Y DP YGG+L+P+G Q M     +   
Sbjct: 104 SSVVPTMGE--HHDPNSQMELVL------TSYPYSDPQYGGMLTPYGAQAMLPPHFYGIH 163

Query: 233 YSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMR 292
           + RM LPL M EEPVYVNAKQYHGILRRRQSRAK E+E K+ ++ RKPYLHESRHLHA+R
Sbjct: 164 HGRMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKTELEKKLIKA-RKPYLHESRHLHALR 223

Query: 293 RERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGS 331
           R RGCGGRFL+  K+        DD+ E S++  G     N S
Sbjct: 224 RARGCGGRFLNTKKQ--------DDNDENSSLEKGMNLDANDS 249

[Close]

BLAST of Csa4G159320 vs. NCBI nr
Match: gi|823151231|ref|XP_012475442.1| (PREDICTED: nuclear transcription factor Y subunit A-4-like [Gossypium raimondii])

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33
Identity = 86/169 (50.89%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 170 RDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTM-----H 229
           + V +  P    EH H   SQ EL+  S+   TSY Y DP YGG+L+ +G Q M     +
Sbjct: 83  KHVPSTTPLTLGEH-HEPNSQMELVGHSIVL-TSYPYSDPQYGGMLTSYGPQMMVSPHLY 142

Query: 230 NSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLH 289
              ++RM LPL M EEPVYVNAKQYHGILRRRQ RAKAE+E K  +  RKPYLHESRHLH
Sbjct: 143 GMHHARMPLPLQMEEEPVYVNAKQYHGILRRRQIRAKAELEKKAIKI-RKPYLHESRHLH 202

Query: 290 AMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSE-SMCNGSKC 333
           AMRR RGCGGRFL+  K+ +  +      G  S+ ++ ++ S+ +GS+C
Sbjct: 203 AMRRARGCGGRFLNTKKQGDDVTSPTSQKGMNSDENISTKSSILSGSEC 248

The following BLAST results are available for this feature:

BLAST of Csa4G159320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFYA9_ARATH	1.8e-27	34.98	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2...	[more]
NFYA1_ARATH	5.4e-27	53.44	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2...	[more]
NFYA7_ARATH	1.6e-26	40.74	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2...	[more]
NFYA8_ARATH	1.6e-23	48.00	Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2...	[more]
NFYA3_ARATH	8.0e-23	45.99	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2...	[more]

BLAST of Csa4G159320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWA0_CUCSA	1.5e-201	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G159320 PE=4 SV=1	[more]
A0A0D2PDJ8_GOSRA	1.2e-33	50.89	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G172100 PE=4 SV=1	[more]
A0A0B0PEQ5_GOSAR	1.2e-33	50.89	Nuclear transcription factor Y subunit A-1-like protein OS=Gossypium arboreum GN...	[more]
A0A0D2Q705_GOSRA	3.0e-32	47.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G151800 PE=4 SV=1	[more]
A0A061EY16_THECC	3.9e-32	40.68	Nuclear factor Y, putative OS=Theobroma cacao GN=TCM_024732 PE=4 SV=1	[more]

BLAST of Csa4G159320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20910.1	1.0e-28	34.98	nuclear factor Y, subunit A9	[more]
AT5G12840.1	3.0e-28	53.44	nuclear factor Y, subunit A1	[more]
AT1G30500.2	8.8e-28	40.74	nuclear factor Y, subunit A7	[more]
AT1G17590.1	9.1e-25	48.00	nuclear factor Y, subunit A8	[more]
AT1G72830.2	2.0e-24	44.53	nuclear factor Y, subunit A3	[more]

BLAST of Csa4G159320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198675\|gb\|KGN53833.1\|	2.1e-201	100.00	hypothetical protein Csa_4G159320 [Cucumis sativus]	[more]
gi\|449465501\|ref\|XP_004150466.1\|	4.9e-153	100.00	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis sativus]	[more]
gi\|659121698\|ref\|XP_008460780.1\|	4.4e-122	84.81	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]	[more]
gi\|645250566\|ref\|XP_008231270.1\|	1.0e-33	52.76	PREDICTED: nuclear transcription factor Y subunit A-1-like [Prunus mume]	[more]
gi\|823151231\|ref\|XP_012475442.1\|	1.7e-33	50.89	PREDICTED: nuclear transcription factor Y subunit A-4-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001289	NFYA
IPR018362	CCAAT-binding_factor_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0016602	CCAAT-binding factor complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G159320.1	Csa4G159320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 241..263 score: 6.7E-24coord: 273..296 score: 6.7
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 172..325 score: 2.2
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 240..296 score: 4.4
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 237..299 score: 1.0
IPR001289	Nuclear transcription factor Y subunit A	PROFILE	PS51152	NFYA_HAP2_2	coord: 238..299 score: 38
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 243..263 scor
None	No IPR available	unknown	Coil	Coil	coord: 254..274 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G159320	MELO3C023161	Melon (DHL92) v3.5.1	cumeB331
Csa4G159320	ClCG04G000250	Watermelon (Charleston Gray)	cuwcgB305
Csa4G159320	Lsi01G018770	Bottle gourd (USVL1VR-Ls)	culsiB260
Csa4G159320	MELO3C023161.2	Melon (DHL92) v3.6.1	cumedB313
Csa4G159320	Cla97C04G068610	Watermelon (97103) v2	cuwmbB302
Csa4G159320	CSPI04G10460	Wild cucumber (PI 183967)	cpicuB182
Csa4G159320	Cucsa.374630	Cucumber (Gy14) v1	cgycuB524
Csa4G159320	CmaCh03G000770	Cucurbita maxima (Rimu)	cmacuB673
Csa4G159320	CmoCh03G000780	Cucurbita moschata (Rifu)	cmocuB662
Csa4G159320	Cp4.1LG10g11710	Cucurbita pepo (Zucchini)	cpecuB074
Csa4G159320	Carg22465	Silver-seed gourd	carcuB0214

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G159320	Cucumber (Gy14) v2	cgybcuB165
Csa4G159320	Wax gourd	cuwgoB392