Cucsa.377690 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.377690
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDnaJ like subfamily C member 2
Locationscaffold03806 : 98994 .. 99256 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAG

mRNA sequence

ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAG

Coding sequence (CDS)

ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAG

Protein sequence

MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEILLEDLRRIESGRVPIPNYRRTSNRDEELX
Homology
[Close]
BLAST of Cucsa.377690 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.6e-23
Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MAS+S+       +WT K+NKLFE+ALA YD+DTP+RW N+A AVGGKSA+EV+RHYE+L
Sbjct: 1  MASNSMSSS---ASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELL 60

Query: 61 LEDLRRIESGRVPIPNYRRTSN 83
          + D+  IESGR P PNYR   N
Sbjct: 61 IRDVNDIESGRYPHPNYRSNGN 79

[Close]
BLAST of Cucsa.377690 vs. Swiss-Prot
Match: RADL5_ARATH (Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22
Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSS+      ++WT KQNK+FE+ALA+YDKDTP+RWQN+A AVG KSA+EV+RHY+IL
Sbjct: 1  MASSSMSSS---SSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDIL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          +EDL  IE   VP+P Y+
Sbjct: 61 VEDLMNIEQDLVPLPKYK 75

[Close]
BLAST of Cucsa.377690 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22
Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MAS+S     P   WT  QNK+FE+ALA+YDKDTP+RW N+A AVGGK+ +EV+RHY+IL
Sbjct: 1  MASNSRSSISP---WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDIL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          +EDL  IE+GRVP+PNY+
Sbjct: 61 VEDLINIETGRVPLPNYK 75

[Close]
BLAST of Cucsa.377690 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22
Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSS+  Q    +WT KQNK FE+ALA YD+DTP RWQN+A  VGGK+ +EV+RHYE+L
Sbjct: 1  MASSSMSSQS-SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          ++D+  IE+G VP PNYR
Sbjct: 61 VQDINSIENGHVPFPNYR 77

[Close]
BLAST of Cucsa.377690 vs. Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.3e-21
Identity = 42/66 (63.64%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 15 WTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEILLEDLRRIESGRVPI 74
          W+ K+NK FE+ALA+YDKDTP+RW N+A AV G++ +EV++HYEIL+ED++ IESG+VP 
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70

Query: 75 PNYRRT 81
          PNYR T
Sbjct: 71 PNYRTT 76

[Close]
BLAST of Cucsa.377690 vs. TrEMBL
Match: A0A0A0K2A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G000020 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL
Sbjct: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRRTSNRDEEL 88
          LEDLRRIESGRVPIPNYRRTSNRDEEL
Sbjct: 61 LEDLRRIESGRVPIPNYRRTSNRDEEL 87

[Close]
BLAST of Cucsa.377690 vs. TrEMBL
Match: I1LJC8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G117200 PE=4 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-29
Identity = 69/90 (76.67%), Postives = 78/90 (86.67%), Query Frame = 1 

Query: 1  MASSSL-KQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEI 60
          MASSSL KQ+  +++WTPKQNKLFEKALA YDKDTPERWQN+A AVGGKSADEV+RHYEI
Sbjct: 1  MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPERWQNVAKAVGGKSADEVKRHYEI 60

Query: 61 LLEDLRRIESGRVPIPNYRRT---SNRDEE 87
          LLEDLR IESGRVP+P Y+ T   +N DEE
Sbjct: 61 LLEDLRHIESGRVPLPKYKSTGSSTNVDEE 90

[Close]
BLAST of Cucsa.377690 vs. TrEMBL
Match: A0A0B2RZB1_GLYSO (DnaJ like subfamily C member 2 OS=Glycine soja GN=glysoja_020526 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-29
Identity = 69/90 (76.67%), Postives = 78/90 (86.67%), Query Frame = 1 

Query: 1  MASSSL-KQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEI 60
          MASSSL KQ+  +++WTPKQNKLFEKALA YDKDTPERWQN+A AVGGKSADEV+RHYEI
Sbjct: 1  MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPERWQNVAKAVGGKSADEVKRHYEI 60

Query: 61 LLEDLRRIESGRVPIPNYRRT---SNRDEE 87
          LLEDLR IESGRVP+P Y+ T   +N DEE
Sbjct: 61 LLEDLRHIESGRVPLPKYKSTGSSTNVDEE 90

[Close]
BLAST of Cucsa.377690 vs. TrEMBL
Match: A0A061E6U2_THECC (DnaJ subfamily C member 2 OS=Theobroma cacao GN=TCM_006875 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.6e-29
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSSL Q R   +WT KQNKLFEKALA YDKDTP+RW N+A AVGGK+A+EV+RHYEIL
Sbjct: 1  MASSSL-QSRDSVSWTAKQNKLFEKALAKYDKDTPDRWHNVAKAVGGKTAEEVKRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRRTSNRDEE 87
          +EDL+ IESGRVPIPNYR T N DEE
Sbjct: 61 VEDLKHIESGRVPIPNYRSTGNADEE 85

[Close]
BLAST of Cucsa.377690 vs. TrEMBL
Match: A0A151TGA1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012369 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-28
Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSSLKQ+  +++WTPKQNKLFEKALA YDKDTP+RWQN+A AVG KSADEV+RHYEIL
Sbjct: 1  MASSSLKQKACDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAKAVGDKSADEVKRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          LEDLR IESGRVP+P Y+
Sbjct: 61 LEDLRHIESGRVPLPKYK 78

[Close]
BLAST of Cucsa.377690 vs. TAIR10
Match: AT1G19510.1 (AT1G19510.1 RAD-like 5)

HSP 1 Score: 106.7 bits (265), Expect = 7.5e-24
Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSS+      ++WT KQNK+FE+ALA+YDKDTP+RWQN+A AVG KSA+EV+RHY+IL
Sbjct: 1  MASSSMSSS---SSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDIL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          +EDL  IE   VP+P Y+
Sbjct: 61 VEDLMNIEQDLVPLPKYK 75

[Close]
BLAST of Cucsa.377690 vs. TAIR10
Match: AT4G39250.1 (AT4G39250.1 RAD-like 1)

HSP 1 Score: 106.3 bits (264), Expect = 9.8e-24
Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSS+  Q    +WT KQNK FE+ALA YD+DTP RWQN+A  VGGK+ +EV+RHYE+L
Sbjct: 1  MASSSMSSQS-SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          ++D+  IE+G VP PNYR
Sbjct: 61 VQDINSIENGHVPFPNYR 77

[Close]
BLAST of Cucsa.377690 vs. TAIR10
Match: AT1G75250.1 (AT1G75250.1 RAD-like 6)

HSP 1 Score: 106.3 bits (264), Expect = 9.8e-24
Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MAS+S     P   WT  QNK+FE+ALA+YDKDTP+RW N+A AVGGK+ +EV+RHY+IL
Sbjct: 1  MASNSRSSISP---WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDIL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          +EDL  IE+GRVP+PNY+
Sbjct: 61 VEDLINIETGRVPLPNYK 75

[Close]
BLAST of Cucsa.377690 vs. TAIR10
Match: AT2G18328.1 (AT2G18328.1 RAD-like 4)

HSP 1 Score: 99.8 bits (247), Expect = 9.2e-22
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSS+      ++WT +++K FE ALA +DKDTP+RWQ IA AVGGKS +EV+RHYE+L
Sbjct: 1  MASSSMST----SSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELL 60

Query: 61 LEDLRRIESGRVPIPNYRRTS 82
          L D+  IESGR P P YR T+
Sbjct: 61 LRDVNDIESGRYPQPRYRNTN 77

[Close]
BLAST of Cucsa.377690 vs. TAIR10
Match: AT2G21650.1 (AT2G21650.1 Homeodomain-like superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 1.0e-20
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MAS S+       +WT KQNK FE+ALA+YD+DTP+RW N+A AVGGK+ +E +R Y++L
Sbjct: 1  MASGSMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLL 60

Query: 61 LEDLRRIESGRVPIPNYRRTSN-------RDEE 87
          + D+  IE+G VP P+Y+ T+        RDEE
Sbjct: 61 VRDIESIENGHVPFPDYKTTTGNSNRGRLRDEE 92

[Close]
BLAST of Cucsa.377690 vs. NCBI nr
Match: gi|449466753|ref|XP_004151090.1| (PREDICTED: protein RADIALIS-like 3 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.4e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL
Sbjct: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRRTSNRDEEL 88
          LEDLRRIESGRVPIPNYRRTSNRDEEL
Sbjct: 61 LEDLRRIESGRVPIPNYRRTSNRDEEL 87

[Close]
BLAST of Cucsa.377690 vs. NCBI nr
Match: gi|659092344|ref|XP_008447023.1| (PREDICTED: protein RADIALIS-like 3 [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 8.3e-41
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL
Sbjct: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRRTSNRDEEL 88
          LEDLR+IESGRVPIPNYR TSNRDEEL
Sbjct: 61 LEDLRQIESGRVPIPNYRGTSNRDEEL 87

[Close]
BLAST of Cucsa.377690 vs. NCBI nr
Match: gi|571488292|ref|XP_003537885.2| (PREDICTED: protein RADIALIS-like 4 [Glycine max])

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-29
Identity = 69/90 (76.67%), Postives = 78/90 (86.67%), Query Frame = 1 

Query: 1  MASSSL-KQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEI 60
          MASSSL KQ+  +++WTPKQNKLFEKALA YDKDTPERWQN+A AVGGKSADEV+RHYEI
Sbjct: 1  MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPERWQNVAKAVGGKSADEVKRHYEI 60

Query: 61 LLEDLRRIESGRVPIPNYRRT---SNRDEE 87
          LLEDLR IESGRVP+P Y+ T   +N DEE
Sbjct: 61 LLEDLRHIESGRVPLPKYKSTGSSTNVDEE 90

[Close]
BLAST of Cucsa.377690 vs. NCBI nr
Match: gi|590685723|ref|XP_007042177.1| (DnaJ subfamily C member 2 [Theobroma cacao])

HSP 1 Score: 134.4 bits (337), Expect = 9.5e-29
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSSL Q R   +WT KQNKLFEKALA YDKDTP+RW N+A AVGGK+A+EV+RHYEIL
Sbjct: 1  MASSSL-QSRDSVSWTAKQNKLFEKALAKYDKDTPDRWHNVAKAVGGKTAEEVKRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRRTSNRDEE 87
          +EDL+ IESGRVPIPNYR T N DEE
Sbjct: 61 VEDLKHIESGRVPIPNYRSTGNADEE 85

[Close]
BLAST of Cucsa.377690 vs. NCBI nr
Match: gi|1012354898|gb|KYP66085.1| (hypothetical protein KK1_012369 [Cajanus cajan])

HSP 1 Score: 132.9 bits (333), Expect = 2.8e-28
Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 1 

Query: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60
          MASSSLKQ+  +++WTPKQNKLFEKALA YDKDTP+RWQN+A AVG KSADEV+RHYEIL
Sbjct: 1  MASSSLKQKACDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAKAVGDKSADEVKRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          LEDLR IESGRVP+P Y+
Sbjct: 61 LEDLRHIESGRVPLPKYK 78

The following BLAST results are available for this feature:
BLAST of Cucsa.377690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RADL3_ARATH4.6e-2360.98Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1[more]
RADL5_ARATH1.3e-2262.82Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1[more]
RADL6_ARATH1.7e-2262.82Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1[more]
RADL1_ARATH1.7e-2261.54Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1[more]
RAD_ANTMA7.3e-2163.64Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1[more]
BLAST of Cucsa.377690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2A2_CUCSA3.1e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G000020 PE=4 SV=1[more]
I1LJC8_SOYBN1.3e-2976.67Uncharacterized protein OS=Glycine max GN=GLYMA_11G117200 PE=4 SV=2[more]
A0A0B2RZB1_GLYSO1.3e-2976.67DnaJ like subfamily C member 2 OS=Glycine soja GN=glysoja_020526 PE=4 SV=1[more]
A0A061E6U2_THECC6.6e-2975.58DnaJ subfamily C member 2 OS=Theobroma cacao GN=TCM_006875 PE=4 SV=1[more]
A0A151TGA1_CAJCA1.9e-2879.49Uncharacterized protein OS=Cajanus cajan GN=KK1_012369 PE=4 SV=1[more]
BLAST of Cucsa.377690 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19510.17.5e-2462.82 RAD-like 5[more]
AT4G39250.19.8e-2461.54 RAD-like 1[more]
AT1G75250.19.8e-2462.82 RAD-like 6[more]
AT2G18328.19.2e-2259.26 RAD-like 4[more]
AT2G21650.11.0e-2049.46 Homeodomain-like superfamily protein[more]
BLAST of Cucsa.377690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449466753|ref|XP_004151090.1|4.4e-42100.00PREDICTED: protein RADIALIS-like 3 [Cucumis sativus][more]
gi|659092344|ref|XP_008447023.1|8.3e-4197.70PREDICTED: protein RADIALIS-like 3 [Cucumis melo][more]
gi|571488292|ref|XP_003537885.2|1.9e-2976.67PREDICTED: protein RADIALIS-like 4 [Glycine max][more]
gi|590685723|ref|XP_007042177.1|9.5e-2975.58DnaJ subfamily C member 2 [Theobroma cacao][more]
gi|1012354898|gb|KYP66085.1|2.8e-2879.49hypothetical protein KK1_012369 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017877Myb-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.377690.1Cucsa.377690.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..57
score: 5.
IPR001005SANT/Myb domainSMARTSM00717santcoord: 11..63
score: 2.
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 13..67
score: 1.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 13..69
score: 2.42
IPR017877Myb-like domainPROFILEPS50090MYB_LIKEcoord: 7..61
score: 6
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 15..79
score: 1.2
NoneNo IPR availablePANTHERPTHR24078:SF177PROTEIN DNJ-23-RELATEDcoord: 15..79
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.377690CmaCh19G006730Cucurbita maxima (Rimu)cgycmaB1038
Cucsa.377690CmoCh11G011180Cucurbita moschata (Rifu)cgycmoB1036
Cucsa.377690CmoCh19G006880Cucurbita moschata (Rifu)cgycmoB1037
Cucsa.377690Lsi11G011070Bottle gourd (USVL1VR-Ls)cgylsiB610
Cucsa.377690Cp4.1LG07g04060Cucurbita pepo (Zucchini)cgycpeB0996
Cucsa.377690Cp4.1LG15g05510Cucurbita pepo (Zucchini)cgycpeB0992
Cucsa.377690Cp4.1LG04g00950Cucurbita pepo (Zucchini)cgycpeB0994
Cucsa.377690MELO3C012498.2Melon (DHL92) v3.6.1cgymedB609
Cucsa.377690Cla97C02G031860Watermelon (97103) v2cgywmbB647
Cucsa.377690Bhi05G001105Wax gourdcgywgoB753
Cucsa.377690Carg04049Silver-seed gourdcarcgyB1100
Cucsa.377690Carg24681Silver-seed gourdcarcgyB0215
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.377690Cucurbita pepo (Zucchini)cgycpeB0993
Cucsa.377690Bottle gourd (USVL1VR-Ls)cgylsiB609
Cucsa.377690Silver-seed gourdcarcgyB0372
Cucsa.377690Cucumber (Chinese Long) v3cgycucB572
Cucsa.377690Watermelon (97103) v2cgywmbB646
Cucsa.377690Wax gourdcgywgoB754
Cucsa.377690Cucumber (Gy14) v1cgycgyB058
Cucsa.377690Cucurbita maxima (Rimu)cgycmaB1037
Cucsa.377690Wild cucumber (PI 183967)cgycpiB556
Cucsa.377690Wild cucumber (PI 183967)cgycpiB557
Cucsa.377690Cucumber (Chinese Long) v2cgycuB527
Cucsa.377690Cucumber (Chinese Long) v2cgycuB528
Cucsa.377690Melon (DHL92) v3.5.1cgymeB611
Cucsa.377690Melon (DHL92) v3.5.1cgymeB612
Cucsa.377690Watermelon (Charleston Gray)cgywcgB642
Cucsa.377690Watermelon (Charleston Gray)cgywcgB643
Cucsa.377690Watermelon (97103) v1cgywmB679
Cucsa.377690Watermelon (97103) v1cgywmB680