Cucsa.377690.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAG ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAG ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAG MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEILLEDLRRIESGRVPIPNYRRTSNRDEELX
BLAST of Cucsa.377690.1 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 4.6e-23 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. Swiss-Prot
Match: RADL5_ARATH (Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22 Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 7.3e-21 Identity = 42/66 (63.64%), Postives = 57/66 (86.36%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TrEMBL
Match: A0A0A0K2A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G000020 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.1e-42 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TrEMBL
Match: I1LJC8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G117200 PE=4 SV=2) HSP 1 Score: 136.7 bits (343), Expect = 1.3e-29 Identity = 69/90 (76.67%), Postives = 78/90 (86.67%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TrEMBL
Match: A0A0B2RZB1_GLYSO (DnaJ like subfamily C member 2 OS=Glycine soja GN=glysoja_020526 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.3e-29 Identity = 69/90 (76.67%), Postives = 78/90 (86.67%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TrEMBL
Match: A0A061E6U2_THECC (DnaJ subfamily C member 2 OS=Theobroma cacao GN=TCM_006875 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 6.6e-29 Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TrEMBL
Match: A0A151TGA1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012369 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.9e-28 Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TAIR10
Match: AT1G19510.1 (AT1G19510.1 RAD-like 5) HSP 1 Score: 106.7 bits (265), Expect = 7.5e-24 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TAIR10
Match: AT4G39250.1 (AT4G39250.1 RAD-like 1) HSP 1 Score: 106.3 bits (264), Expect = 9.8e-24 Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TAIR10
Match: AT1G75250.1 (AT1G75250.1 RAD-like 6) HSP 1 Score: 106.3 bits (264), Expect = 9.8e-24 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TAIR10
Match: AT2G18328.1 (AT2G18328.1 RAD-like 4) HSP 1 Score: 99.8 bits (247), Expect = 9.2e-22 Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. TAIR10
Match: AT2G21650.1 (AT2G21650.1 Homeodomain-like superfamily protein) HSP 1 Score: 96.3 bits (238), Expect = 1.0e-20 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. NCBI nr
Match: gi|449466753|ref|XP_004151090.1| (PREDICTED: protein RADIALIS-like 3 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 4.4e-42 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. NCBI nr
Match: gi|659092344|ref|XP_008447023.1| (PREDICTED: protein RADIALIS-like 3 [Cucumis melo]) HSP 1 Score: 174.5 bits (441), Expect = 8.3e-41 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. NCBI nr
Match: gi|571488292|ref|XP_003537885.2| (PREDICTED: protein RADIALIS-like 4 [Glycine max]) HSP 1 Score: 136.7 bits (343), Expect = 1.9e-29 Identity = 69/90 (76.67%), Postives = 78/90 (86.67%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. NCBI nr
Match: gi|590685723|ref|XP_007042177.1| (DnaJ subfamily C member 2 [Theobroma cacao]) HSP 1 Score: 134.4 bits (337), Expect = 9.5e-29 Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 1
BLAST of Cucsa.377690.1 vs. NCBI nr
Match: gi|1012354898|gb|KYP66085.1| (hypothetical protein KK1_012369 [Cajanus cajan]) HSP 1 Score: 132.9 bits (333), Expect = 2.8e-28 Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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