Cucsa.356700 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAAAAaGAAAAGAAATGGAAGGCCAAAAAAAaGAAGAAGAAGAAGAAGAAGAAGAGAAGAAAAAAGAAAGGTGAAGAAGGAAGAGGGAAGGATTtAGTTAAATTTAGGAGAACTAGTTGAGTCCCATAATTGGGTTTCACATAACAAACTAATTCCACAAATTTTCTTCATATTTTCTTCCCTTTTCCCTCGATTGTCTTCCTCATTCTCCTCTGCTCTTCTTATTTATTCTTCAATCCCTTCATCTCATTCTTCTTCAACTCCCTGTACTCTTCCTTTCCTTTCCTTTCCTTTCCCTTCCCTTCCCCCcTGCTTCTTAAGGTAATTCCATTTCATTTCCTCTCTCTTTGCTTCTCTTTCAATTTCTGCGCATCACTTTTCATTCTGCTTAGAAATGAATGTTACTCTTCTTATTTTTTtCCTTTCTTGGTGCTACAAATCATAAATAGTTTGAGACTTTGTTGCTGACTCTTGGATTTCAGATGGGTATTGTTCCGATCGGTGAATTTCTTTGTGAATACTTTGATTTGTTTATTTACTCTAAAACTGGGATCGTGGGGATTGACGATTACTCAGATTTGGATGCTATTGGATCAATTATTTTTGTGTTGATTTAATTACTCTCCCGGATCTTGCTCTGCTCATCAATTAGTGGGATTCTTATGTTCCTCACCATTTTTCTTATTTCGATTTTCTATTAGCTCTACAATAAAATTTCATGAATTGTGTGTTTTTGGCTTGTTTCATACGCTTATTGGTTTTTtATTTTTGAGTTCTCTGTTTCTATGGTTATCATTGAAGGCAGTAGGAATCTCAAACAAACATGTTATTCGTGGTTTTTtCTTCCCTTCATTTCTAGAACAAGAGCTAAGATATTGGAGTAATTGTTTATGTTTCCACATCGAAAAAATTGGATTTGCAGAGGGAAATATGAGGATGATTAACAAGTTTGTTGAAAGAAGCTGTTACTTCTTATAGAGCGAGTCTAATTAGAGAATATAATTAGGCGTGTCAATGGTTTAGAGAGAGAGGAGGAAGAATTCTGAAATTTGAAAGAGGAATGCAAAAATGTTGTTGAAAGCTTTTAATTCCCAAGAAGAATTAAGGCTTTTGGATGTAGCCATCATGTGGTACACTAATAATAAAGTTCAAAGGAAAAGGAAAAGACCCCCTATTTTTtGGTTGCCCGAACTGGCTTTCCTTCTGTCATCTCTTCCTCCTCTGTTCTAATGTTCAAACTTTATGACTTAGGCTGCTAAGTTTCTTCAACTTATCCTTGCTGATGCCTGGAAGAGTGAAGGATTTTATGTTGTTGAGTTTATGCTATGTGGTAACAGTCATAGGGATACCGCTAAGATCTTGTTGACCAATAGCTTCACTGCTGTTTGATGGGGCTTATGGCTGAATGACATAAAAACTTAAATCTAATACAAGAGGTTGTAGTTTTGTTCCTTCTTCTTAGTGCCTTGTGTCTTTGTAGAATCTTGTACTGAGTTAGTTTGGTGTGCAGGATAAATTGATCATTTAATGAGAGTAACTTTTTAAATGCTAAGTAAAGAAGTTTGAAAGCAATATTCACCTTTTCTAGTTTTTGAAACAGTATAAAAATTTTCAAATTTTGAATGCTTATCTGGAACTCAAGGAAGTGGATCATCTCCGTTTTGTAAGATTTGAACAACAATTAAAAGAATGACATAGATCGAACCCTTAATCTTGTCAATGACCTTTGTGATCAAGAGCCTTCAAATAATTGAAGTTTTACTCTGAAGTGTCTGAGAAATAAACTACAATCAATATTCATTACCGGCAATGAGATTACTGAACTAAAGCAAAATAATAAACAGAGACGAGGTAGTTTGAGGTAGAAAAAACAACAATTGAGGCACTCTAGGACTTGTTTTCTGCTATTTTCTTCTTGCCTTTCATAGGGATCATACAGATTAGTAATTGAATTTGCTATCTTAACTAAGAGGATATATTTTTCATTATTCGAAGTTGGTTTTGTAGTTGTGCTTGAATGTATTTACTGTTAACTCATTGTATATGGATTTTGAATGCCCTTCAAGATTCACCTGTGTAGAGCTGAAAATTCATTTAAAAAACATCAAAGCTGTTGAGTTTGCTACATGCTTGTGATTGTGTTTTATCTGTAAATTCCCTATGCCTTTTTGTGTATttTTTTTTTTtAAATAACCAATTGAGACCAATTTTTATTTTAACTGAAGTCGATATTTTTCTTAAGGTTCTTGGAACAGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAGAGAAGTGTTGATTAATTCTCTTTCAAAGATTTTGATGGCAGGATAATATTGTTATACGAGGGCAAGAGCATGTCAGTAATGGTGTTGATGTCTTACTTGTGGACCCTAAAATCCAAGTCCTTGTTATATTTATCAGTAAAGTTGTGTTATGCTTGAGCTTAATATGATGGCGTTTTCTGTTGTAAGATGAATTGATGCATTAATCTCTTAATACTGTCAAGTGGCTTTTACTGTTGTGGCCAACATATTGTCTTATCAATAAAAATTACTTCATAGAA agaaaaaaagaaaagaaatggaaggccaaaaaaaagaagaagaagaagaagaagaagagaagaaaaaagaaaggtgaagaaGGAAGAGGGAAGGATTTAGTTAAATTTAGGAGAACTAGTTGAGTCCCATAATTGGGTTTCACATAACAAACTAATTCCACAAATTTTCTTCATATTTTCTTCCCTTTTCCCTCGATTGTCTTCCTCATTCTCCTCTGCTCTTCTTATTTATTCTTCAATCCCTTCATCTCATTCTTCTTCAACTCCCTGTACTCttcctttcctttcctttcctttcccttcccttccCCCCTGCTTCTTAAGGTTCTTGGAACAGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAGAGAAGTGTTGATTAATTCTCTTTCAAAGATTTTGATGGCAGGATAATATTGTTATACGAGGGCAAGAGCATGTCAGTAATGGTGTTGATGTCTTACTTGTGGACCCTAAAATCCAAGTCCTTGTTATATTTATCAGTAAAGTTGTGTTATGCTTGAGCTTAATATGATGGCGTTTTCTGTTGTAAGATGAATTGATGCATTAATCTCTTAATACTGTCAAGTGGCTTTTACTGTTGTGGCCAACATATTGTCTTATCAATAAAAATTACTTCATAGAA ATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAG MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV*
BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAA2_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana GN=At5g16450 PE=1 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 3.2e-78 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1
BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAA1_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana GN=At3g02770 PE=2 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.3e-76 Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 1
BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAA3_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana GN=At5g56260 PE=1 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 5.9e-64 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1
BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAAH_CUPPJ (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=Reut_A1963 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-48 Identity = 85/159 (53.46%), Postives = 115/159 (72.33%), Query Frame = 1
BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAAH_BURM1 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_1223 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 6.0e-48 Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 1
BLAST of Cucsa.356700 vs. TrEMBL
Match: A0A0A0LXT5_CUCSA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus GN=Csa_1G657460 PE=3 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 6.3e-89 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Cucsa.356700 vs. TrEMBL
Match: A0A067EJI8_CITSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis GN=CISIN_1g031057mg PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.0e-83 Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1
BLAST of Cucsa.356700 vs. TrEMBL
Match: V4SME9_9ROSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus clementina GN=CICLE_v10012944mg PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.0e-83 Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1
BLAST of Cucsa.356700 vs. TrEMBL
Match: A0A068TPU4_COFCA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Coffea canephora GN=GSCOC_T00022026001 PE=3 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 4.0e-83 Identity = 152/166 (91.57%), Postives = 160/166 (96.39%), Query Frame = 1
BLAST of Cucsa.356700 vs. TrEMBL
Match: I3SFU5_LOTJA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 5.2e-83 Identity = 152/166 (91.57%), Postives = 161/166 (96.99%), Query Frame = 1
BLAST of Cucsa.356700 vs. TAIR10
Match: AT5G16450.1 (AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 292.4 bits (747), Expect = 1.8e-79 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1
BLAST of Cucsa.356700 vs. TAIR10
Match: AT3G02770.1 (AT3G02770.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 286.2 bits (731), Expect = 1.3e-77 Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 1
BLAST of Cucsa.356700 vs. TAIR10
Match: AT5G56260.1 (AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 245.0 bits (624), Expect = 3.3e-65 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1
BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|449442669|ref|XP_004139103.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus]) HSP 1 Score: 334.7 bits (857), Expect = 9.1e-89 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|659085949|ref|XP_008443692.1| (PREDICTED: regulator of ribonuclease-like protein 2 [Cucumis melo]) HSP 1 Score: 333.6 bits (854), Expect = 2.0e-88 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|743925654|ref|XP_011006971.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphratica]) HSP 1 Score: 318.2 bits (814), Expect = 8.8e-84 Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 1
BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|729321083|ref|XP_010533431.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Tarenaya hassleriana]) HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83 Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 1
BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|747074813|ref|XP_011084414.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Sesamum indicum]) HSP 1 Score: 317.4 bits (812), Expect = 1.5e-83 Identity = 155/166 (93.37%), Postives = 162/166 (97.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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