Cucsa.356700 (gene) Cucumber (Gy14) v1

NameCucsa.356700
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Description4-hydroxy-4-methyl-2-oxoglutarate aldolase
Locationscaffold03577 : 1560247 .. 1563283 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAAAaGAAAAGAAATGGAAGGCCAAAAAAAaGAAGAAGAAGAAGAAGAAGAAGAGAAGAAAAAAGAAAGGTGAAGAAGGAAGAGGGAAGGATTtAGTTAAATTTAGGAGAACTAGTTGAGTCCCATAATTGGGTTTCACATAACAAACTAATTCCACAAATTTTCTTCATATTTTCTTCCCTTTTCCCTCGATTGTCTTCCTCATTCTCCTCTGCTCTTCTTATTTATTCTTCAATCCCTTCATCTCATTCTTCTTCAACTCCCTGTACTCTTCCTTTCCTTTCCTTTCCTTTCCCTTCCCTTCCCCCcTGCTTCTTAAGGTAATTCCATTTCATTTCCTCTCTCTTTGCTTCTCTTTCAATTTCTGCGCATCACTTTTCATTCTGCTTAGAAATGAATGTTACTCTTCTTATTTTTTtCCTTTCTTGGTGCTACAAATCATAAATAGTTTGAGACTTTGTTGCTGACTCTTGGATTTCAGATGGGTATTGTTCCGATCGGTGAATTTCTTTGTGAATACTTTGATTTGTTTATTTACTCTAAAACTGGGATCGTGGGGATTGACGATTACTCAGATTTGGATGCTATTGGATCAATTATTTTTGTGTTGATTTAATTACTCTCCCGGATCTTGCTCTGCTCATCAATTAGTGGGATTCTTATGTTCCTCACCATTTTTCTTATTTCGATTTTCTATTAGCTCTACAATAAAATTTCATGAATTGTGTGTTTTTGGCTTGTTTCATACGCTTATTGGTTTTTtATTTTTGAGTTCTCTGTTTCTATGGTTATCATTGAAGGCAGTAGGAATCTCAAACAAACATGTTATTCGTGGTTTTTtCTTCCCTTCATTTCTAGAACAAGAGCTAAGATATTGGAGTAATTGTTTATGTTTCCACATCGAAAAAATTGGATTTGCAGAGGGAAATATGAGGATGATTAACAAGTTTGTTGAAAGAAGCTGTTACTTCTTATAGAGCGAGTCTAATTAGAGAATATAATTAGGCGTGTCAATGGTTTAGAGAGAGAGGAGGAAGAATTCTGAAATTTGAAAGAGGAATGCAAAAATGTTGTTGAAAGCTTTTAATTCCCAAGAAGAATTAAGGCTTTTGGATGTAGCCATCATGTGGTACACTAATAATAAAGTTCAAAGGAAAAGGAAAAGACCCCCTATTTTTtGGTTGCCCGAACTGGCTTTCCTTCTGTCATCTCTTCCTCCTCTGTTCTAATGTTCAAACTTTATGACTTAGGCTGCTAAGTTTCTTCAACTTATCCTTGCTGATGCCTGGAAGAGTGAAGGATTTTATGTTGTTGAGTTTATGCTATGTGGTAACAGTCATAGGGATACCGCTAAGATCTTGTTGACCAATAGCTTCACTGCTGTTTGATGGGGCTTATGGCTGAATGACATAAAAACTTAAATCTAATACAAGAGGTTGTAGTTTTGTTCCTTCTTCTTAGTGCCTTGTGTCTTTGTAGAATCTTGTACTGAGTTAGTTTGGTGTGCAGGATAAATTGATCATTTAATGAGAGTAACTTTTTAAATGCTAAGTAAAGAAGTTTGAAAGCAATATTCACCTTTTCTAGTTTTTGAAACAGTATAAAAATTTTCAAATTTTGAATGCTTATCTGGAACTCAAGGAAGTGGATCATCTCCGTTTTGTAAGATTTGAACAACAATTAAAAGAATGACATAGATCGAACCCTTAATCTTGTCAATGACCTTTGTGATCAAGAGCCTTCAAATAATTGAAGTTTTACTCTGAAGTGTCTGAGAAATAAACTACAATCAATATTCATTACCGGCAATGAGATTACTGAACTAAAGCAAAATAATAAACAGAGACGAGGTAGTTTGAGGTAGAAAAAACAACAATTGAGGCACTCTAGGACTTGTTTTCTGCTATTTTCTTCTTGCCTTTCATAGGGATCATACAGATTAGTAATTGAATTTGCTATCTTAACTAAGAGGATATATTTTTCATTATTCGAAGTTGGTTTTGTAGTTGTGCTTGAATGTATTTACTGTTAACTCATTGTATATGGATTTTGAATGCCCTTCAAGATTCACCTGTGTAGAGCTGAAAATTCATTTAAAAAACATCAAAGCTGTTGAGTTTGCTACATGCTTGTGATTGTGTTTTATCTGTAAATTCCCTATGCCTTTTTGTGTATttTTTTTTTTtAAATAACCAATTGAGACCAATTTTTATTTTAACTGAAGTCGATATTTTTCTTAAGGTTCTTGGAACAGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAGAGAAGTGTTGATTAATTCTCTTTCAAAGATTTTGATGGCAGGATAATATTGTTATACGAGGGCAAGAGCATGTCAGTAATGGTGTTGATGTCTTACTTGTGGACCCTAAAATCCAAGTCCTTGTTATATTTATCAGTAAAGTTGTGTTATGCTTGAGCTTAATATGATGGCGTTTTCTGTTGTAAGATGAATTGATGCATTAATCTCTTAATACTGTCAAGTGGCTTTTACTGTTGTGGCCAACATATTGTCTTATCAATAAAAATTACTTCATAGAA

mRNA sequence

agaaaaaaagaaaagaaatggaaggccaaaaaaaagaagaagaagaagaagaagaagagaagaaaaaagaaaggtgaagaaGGAAGAGGGAAGGATTTAGTTAAATTTAGGAGAACTAGTTGAGTCCCATAATTGGGTTTCACATAACAAACTAATTCCACAAATTTTCTTCATATTTTCTTCCCTTTTCCCTCGATTGTCTTCCTCATTCTCCTCTGCTCTTCTTATTTATTCTTCAATCCCTTCATCTCATTCTTCTTCAACTCCCTGTACTCttcctttcctttcctttcctttcccttcccttccCCCCTGCTTCTTAAGGTTCTTGGAACAGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAGAGAAGTGTTGATTAATTCTCTTTCAAAGATTTTGATGGCAGGATAATATTGTTATACGAGGGCAAGAGCATGTCAGTAATGGTGTTGATGTCTTACTTGTGGACCCTAAAATCCAAGTCCTTGTTATATTTATCAGTAAAGTTGTGTTATGCTTGAGCTTAATATGATGGCGTTTTCTGTTGTAAGATGAATTGATGCATTAATCTCTTAATACTGTCAAGTGGCTTTTACTGTTGTGGCCAACATATTGTCTTATCAATAAAAATTACTTCATAGAA

Coding sequence (CDS)

ATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAG

Protein sequence

MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV*
BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAA2_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.2e-78
Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN LIR+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HP+KA KK +GE+ VP+ +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAA1_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.3e-76
Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN LIR FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HP+KA KK +GE+ V + +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAA3_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.9e-64
Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVL+R  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KG G VLV+DGGGS RCA++GGN    AQNNGWSGIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           +P+K+ KK  GEK+VP+ + GT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAAH_CUPPJ (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-48
Identity = 85/159 (53.46%), Postives = 115/159 (72.33%), Query Frame = 1

Query: 6   TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGR 65
           T ++CDAN   +  G LR + P+F+ +G++Q F+GP  TLK+FEDN L+RE LE  G GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 66  VLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKA 125
           VLVVDGGGS RCA++GGN  + A+ NGW GI+VNGCVRD  E++ CDIG+RALA+HP K+
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 126 YKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTEL 165
            K+  GE+ V + + G  +  G W+Y D DG+LVS  +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

BLAST of Cucsa.356700 vs. Swiss-Prot
Match: RRAAH_BURM1 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_1223 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.0e-48
Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 1

Query: 6   TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGR 65
           T ++CDA+   + +G LR L+P  + YG    F+GP  TLKVFEDN L+R  LE+ G GR
Sbjct: 5   TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGR 64

Query: 66  VLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKA 125
           VLVVDGG S RCA++GGN    A+ NGW+GIVV+GCVRD  E+  C +GV ALA+HP K+
Sbjct: 65  VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124

Query: 126 YKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELS 166
            K+  GE+ VP+TV GTRI  GEW+YAD DG+LVS T L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164

BLAST of Cucsa.356700 vs. TrEMBL
Match: A0A0A0LXT5_CUCSA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus GN=Csa_1G657460 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 6.3e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

BLAST of Cucsa.356700 vs. TrEMBL
Match: A0A067EJI8_CITSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis GN=CISIN_1g031057mg PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.0e-83
Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKA KK +GEKHVPIT+ GTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166

BLAST of Cucsa.356700 vs. TrEMBL
Match: V4SME9_9ROSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus clementina GN=CICLE_v10012944mg PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.0e-83
Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKA KK +GEKHVPIT+ GTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166

BLAST of Cucsa.356700 vs. TrEMBL
Match: A0A068TPU4_COFCA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Coffea canephora GN=GSCOC_T00022026001 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 4.0e-83
Identity = 152/166 (91.57%), Postives = 160/166 (96.39%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGP+VTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKA KK +GEKHVPIT+ GTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRICDGEWLYADTDGILISRAELSV 166

BLAST of Cucsa.356700 vs. TrEMBL
Match: I3SFU5_LOTJA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 5.2e-83
Identity = 152/166 (91.57%), Postives = 161/166 (96.99%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLI+SGE+RAL P+FQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLILSGEVRALHPVFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKA KK +GEKHVPIT+AGTRI DGEWLYADTDGIL+SRTELSV
Sbjct: 121 HPMKANKKGMGEKHVPITIAGTRISDGEWLYADTDGILISRTELSV 166

BLAST of Cucsa.356700 vs. TAIR10
Match: AT5G16450.1 (AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 292.4 bits (747), Expect = 1.8e-79
Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN LIR+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HP+KA KK +GE+ VP+ +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cucsa.356700 vs. TAIR10
Match: AT3G02770.1 (AT3G02770.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 286.2 bits (731), Expect = 1.3e-77
Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN LIR FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HP+KA KK +GE+ V + +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cucsa.356700 vs. TAIR10
Match: AT5G56260.1 (AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 245.0 bits (624), Expect = 3.3e-65
Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVL+R  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KG G VLV+DGGGS RCA++GGN    AQNNGWSGIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           +P+K+ KK  GEK+VP+ + GT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|449442669|ref|XP_004139103.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 9.1e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|659085949|ref|XP_008443692.1| (PREDICTED: regulator of ribonuclease-like protein 2 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 2.0e-88
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|743925654|ref|XP_011006971.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphratica])

HSP 1 Score: 318.2 bits (814), Expect = 8.8e-84
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWSGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWSGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKA KK +GEKHVPIT+ GTRI DGEWLYADTDGIL+SRTEL+V
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRTELAV 166

BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|729321083|ref|XP_010533431.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Tarenaya hassleriana])

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRAL+P+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HPMKA KK +GEKHVPI +AGTRI DGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKANKKGIGEKHVPINIAGTRICDGEWLYADTDGILVSRTELSV 166

BLAST of Cucsa.356700 vs. NCBI nr
Match: gi|747074813|ref|XP_011084414.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Sesamum indicum])

HSP 1 Score: 317.4 bits (812), Expect = 1.5e-83
Identity = 155/166 (93.37%), Postives = 162/166 (97.59%), Query Frame = 1

Query: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
           MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GI+VNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCVRDVDEINGCDIGVRALAS 120

Query: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 167
           HP+KA KK +GEKHVPIT+AGTRI DGEWLYADTDGILVS+TELSV
Sbjct: 121 HPVKANKKGIGEKHVPITIAGTRICDGEWLYADTDGILVSKTELSV 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RRAA2_ARATH3.2e-7884.34Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana GN... [more]
RRAA1_ARATH2.3e-7682.53Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana GN... [more]
RRAA3_ARATH5.9e-6470.48Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana GN... [more]
RRAAH_CUPPJ2.0e-4853.46Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensi... [more]
RRAAH_BURM16.0e-4856.25Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans ... [more]
Match NameE-valueIdentityDescription
A0A0A0LXT5_CUCSA6.3e-89100.004-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus GN=Csa_1G657460 PE... [more]
A0A067EJI8_CITSI3.0e-8392.174-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis GN=CISIN_1g031057m... [more]
V4SME9_9ROSI3.0e-8392.174-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus clementina GN=CICLE_v100129... [more]
A0A068TPU4_COFCA4.0e-8391.574-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Coffea canephora GN=GSCOC_T0002202... [more]
I3SFU5_LOTJA5.2e-8391.574-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Lotus japonicus PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G16450.11.8e-7984.34 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase[more]
AT3G02770.11.3e-7782.53 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase[more]
AT5G56260.13.3e-6570.48 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase[more]
Match NameE-valueIdentityDescription
gi|449442669|ref|XP_004139103.1|9.1e-89100.00PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativu... [more]
gi|659085949|ref|XP_008443692.1|2.0e-8899.40PREDICTED: regulator of ribonuclease-like protein 2 [Cucumis melo][more]
gi|743925654|ref|XP_011006971.1|8.8e-8493.37PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphra... [more]
gi|729321083|ref|XP_010533431.1|1.2e-8393.37PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Tarenaya hassl... [more]
gi|747074813|ref|XP_011084414.1|1.5e-8393.37PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Sesamum indicu... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005493RraA/RraA-like
IPR010203RraA
Vocabulary: Molecular Function
TermDefinition
GO:0008428ribonuclease inhibitor activity
Vocabulary: Biological Process
TermDefinition
GO:0051252regulation of RNA metabolic process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006525 arginine metabolic process
biological_process GO:0018874 benzoate metabolic process
biological_process GO:0032259 methylation
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0006560 proline metabolic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0051252 regulation of RNA metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0047443 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0008948 oxaloacetate decarboxylase activity
molecular_function GO:0008428 ribonuclease inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.356700.1Cucsa.356700.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinGENE3DG3DSA:3.50.30.40coord: 4..164
score: 4.1
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinPFAMPF03737Methyltransf_6coord: 6..159
score: 6.5
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinunknownSSF89562RraA-likecoord: 4..164
score: 1.7
IPR010203Regulator of ribonuclease activity ATIGRFAMsTIGR01935TIGR01935coord: 6..160
score: 9.6
NoneNo IPR availablePANTHERPTHR33254FAMILY NOT NAMEDcoord: 1..164
score: 1.2E
NoneNo IPR availablePANTHERPTHR33254:SF4REGULATOR OF RIBONUCLEASE-LIKE PROTEIN 1-RELATEDcoord: 1..164
score: 1.2E